data_12CJ # _entry.id 12CJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.414 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 12CJ pdb_000012cj 10.2210/pdb12cj/pdb WWPDB D_1000305788 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-05-13 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 12CJ _pdbx_database_status.recvd_initial_deposition_date 2026-03-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 3 _pdbx_contact_author.email robert.batey@colorado.edu _pdbx_contact_author.name_first Robert _pdbx_contact_author.name_last Batey _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1384-6625 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Stelzig, D.' 1 ? 'Hall, S.D.' 2 ? 'Batey, R.T.' 3 0000-0002-1384-6625 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Apo structure of dopamine-binding aptamer, DGR-1B' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stelzig, D.' 1 ? primary 'Hall, S.D.' 2 ? primary 'Batey, R.T.' 3 0000-0002-1384-6625 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man DGR-1B 24954.664 2 ? ? ? ? 2 non-polymer nat 'STRONTIUM ION' 87.620 27 ? ? ? ? 3 water nat water 18.015 18 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(GTP)GACUAGACUCCGUAAUUCGCGUGGAUAUGGCACGCAGUAAGGUAUUGGGCACCGUAAAUGUCCAUAUGUUAGUCC A ; _entity_poly.pdbx_seq_one_letter_code_can GGACUAGACUCCGUAAUUCGCGUGGAUAUGGCACGCAGUAAGGUAUUGGGCACCGUAAAUGUCCAUAUGUUAGUCCA _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'STRONTIUM ION' SR 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 G n 1 3 A n 1 4 C n 1 5 U n 1 6 A n 1 7 G n 1 8 A n 1 9 C n 1 10 U n 1 11 C n 1 12 C n 1 13 G n 1 14 U n 1 15 A n 1 16 A n 1 17 U n 1 18 U n 1 19 C n 1 20 G n 1 21 C n 1 22 G n 1 23 U n 1 24 G n 1 25 G n 1 26 A n 1 27 U n 1 28 A n 1 29 U n 1 30 G n 1 31 G n 1 32 C n 1 33 A n 1 34 C n 1 35 G n 1 36 C n 1 37 A n 1 38 G n 1 39 U n 1 40 A n 1 41 A n 1 42 G n 1 43 G n 1 44 U n 1 45 A n 1 46 U n 1 47 U n 1 48 G n 1 49 G n 1 50 G n 1 51 C n 1 52 A n 1 53 C n 1 54 C n 1 55 G n 1 56 U n 1 57 A n 1 58 A n 1 59 A n 1 60 U n 1 61 G n 1 62 U n 1 63 C n 1 64 C n 1 65 A n 1 66 U n 1 67 A n 1 68 U n 1 69 G n 1 70 U n 1 71 U n 1 72 A n 1 73 G n 1 74 U n 1 75 C n 1 76 C n 1 77 A n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 77 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'synthetic construct' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 32630 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HOH non-polymer . WATER ? 'H2 O' 18.015 SR non-polymer . 'STRONTIUM ION' ? 'Sr 2' 87.620 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 1 1 GTP GTP A . n A 1 2 G 2 2 2 G G A . n A 1 3 A 3 3 3 A A A . n A 1 4 C 4 4 4 C C A . n A 1 5 U 5 5 5 U U A . n A 1 6 A 6 6 6 A A A . n A 1 7 G 7 7 7 G G A . n A 1 8 A 8 8 8 A A A . n A 1 9 C 9 9 9 C C A . n A 1 10 U 10 10 10 U U A . n A 1 11 C 11 11 11 C C A . n A 1 12 C 12 12 12 C C A . n A 1 13 G 13 13 13 G G A . n A 1 14 U 14 14 14 U U A . n A 1 15 A 15 15 15 A A A . n A 1 16 A 16 16 16 A A A . n A 1 17 U 17 17 17 U U A . n A 1 18 U 18 18 18 U U A . n A 1 19 C 19 19 19 C C A . n A 1 20 G 20 20 20 G G A . n A 1 21 C 21 21 21 C C A . n A 1 22 G 22 22 22 G G A . n A 1 23 U 23 23 23 U U A . n A 1 24 G 24 24 24 G G A . n A 1 25 G 25 25 25 G G A . n A 1 26 A 26 26 26 A A A . n A 1 27 U 27 27 27 U U A . n A 1 28 A 28 28 28 A A A . n A 1 29 U 29 29 29 U U A . n A 1 30 G 30 30 30 G G A . n A 1 31 G 31 31 31 G G A . n A 1 32 C 32 32 32 C C A . n A 1 33 A 33 33 33 A A A . n A 1 34 C 34 34 34 C C A . n A 1 35 G 35 35 35 G G A . n A 1 36 C 36 36 36 C C A . n A 1 37 A 37 37 37 A A A . n A 1 38 G 38 38 38 G G A . n A 1 39 U 39 39 39 U U A . n A 1 40 A 40 40 40 A A A . n A 1 41 A 41 41 41 A A A . n A 1 42 G 42 42 42 G G A . n A 1 43 G 43 43 43 G G A . n A 1 44 U 44 44 44 U U A . n A 1 45 A 45 45 45 A A A . n A 1 46 U 46 46 46 U U A . n A 1 47 U 47 47 47 U U A . n A 1 48 G 48 48 48 G G A . n A 1 49 G 49 49 49 G G A . n A 1 50 G 50 50 50 G G A . n A 1 51 C 51 51 51 C C A . n A 1 52 A 52 52 52 A A A . n A 1 53 C 53 53 53 C C A . n A 1 54 C 54 54 54 C C A . n A 1 55 G 55 55 55 G G A . n A 1 56 U 56 56 56 U U A . n A 1 57 A 57 57 57 A A A . n A 1 58 A 58 58 58 A A A . n A 1 59 A 59 59 59 A A A . n A 1 60 U 60 60 60 U U A . n A 1 61 G 61 61 61 G G A . n A 1 62 U 62 62 62 U U A . n A 1 63 C 63 63 63 C C A . n A 1 64 C 64 64 64 C C A . n A 1 65 A 65 65 65 A A A . n A 1 66 U 66 66 66 U U A . n A 1 67 A 67 67 67 A A A . n A 1 68 U 68 68 68 U U A . n A 1 69 G 69 69 69 G G A . n A 1 70 U 70 70 70 U U A . n A 1 71 U 71 71 71 U U A . n A 1 72 A 72 72 72 A A A . n A 1 73 G 73 73 73 G G A . n A 1 74 U 74 74 74 U U A . n A 1 75 C 75 75 75 C C A . n A 1 76 C 76 76 76 C C A . n A 1 77 A 77 77 77 A A A . n B 1 1 GTP 1 1 1 GTP GTP B . n B 1 2 G 2 2 2 G G B . n B 1 3 A 3 3 3 A A B . n B 1 4 C 4 4 4 C C B . n B 1 5 U 5 5 5 U U B . n B 1 6 A 6 6 6 A A B . n B 1 7 G 7 7 7 G G B . n B 1 8 A 8 8 8 A A B . n B 1 9 C 9 9 9 C C B . n B 1 10 U 10 10 10 U U B . n B 1 11 C 11 11 11 C C B . n B 1 12 C 12 12 12 C C B . n B 1 13 G 13 13 13 G G B . n B 1 14 U 14 14 14 U U B . n B 1 15 A 15 15 15 A A B . n B 1 16 A 16 16 16 A A B . n B 1 17 U 17 17 17 U U B . n B 1 18 U 18 18 18 U U B . n B 1 19 C 19 19 19 C C B . n B 1 20 G 20 20 20 G G B . n B 1 21 C 21 21 21 C C B . n B 1 22 G 22 22 22 G G B . n B 1 23 U 23 23 23 U U B . n B 1 24 G 24 24 24 G G B . n B 1 25 G 25 25 25 G G B . n B 1 26 A 26 26 26 A A B . n B 1 27 U 27 27 27 U U B . n B 1 28 A 28 28 28 A A B . n B 1 29 U 29 29 29 U U B . n B 1 30 G 30 30 30 G G B . n B 1 31 G 31 31 31 G G B . n B 1 32 C 32 32 32 C C B . n B 1 33 A 33 33 33 A A B . n B 1 34 C 34 34 34 C C B . n B 1 35 G 35 35 35 G G B . n B 1 36 C 36 36 36 C C B . n B 1 37 A 37 37 37 A A B . n B 1 38 G 38 38 38 G G B . n B 1 39 U 39 39 39 U U B . n B 1 40 A 40 40 40 A A B . n B 1 41 A 41 41 41 A A B . n B 1 42 G 42 42 42 G G B . n B 1 43 G 43 43 43 G G B . n B 1 44 U 44 44 44 U U B . n B 1 45 A 45 45 45 A A B . n B 1 46 U 46 46 46 U U B . n B 1 47 U 47 47 47 U U B . n B 1 48 G 48 48 48 G G B . n B 1 49 G 49 49 49 G G B . n B 1 50 G 50 50 50 G G B . n B 1 51 C 51 51 51 C C B . n B 1 52 A 52 52 52 A A B . n B 1 53 C 53 53 53 C C B . n B 1 54 C 54 54 54 C C B . n B 1 55 G 55 55 55 G G B . n B 1 56 U 56 56 56 U U B . n B 1 57 A 57 57 57 A A B . n B 1 58 A 58 58 58 A A B . n B 1 59 A 59 59 59 A A B . n B 1 60 U 60 60 60 U U B . n B 1 61 G 61 61 61 G G B . n B 1 62 U 62 62 62 U U B . n B 1 63 C 63 63 63 C C B . n B 1 64 C 64 64 64 C C B . n B 1 65 A 65 65 65 A A B . n B 1 66 U 66 66 66 U U B . n B 1 67 A 67 67 67 A A B . n B 1 68 U 68 68 68 U U B . n B 1 69 G 69 69 69 G G B . n B 1 70 U 70 70 70 U U B . n B 1 71 U 71 71 71 U U B . n B 1 72 A 72 72 72 A A B . n B 1 73 G 73 73 73 G G B . n B 1 74 U 74 74 74 U U B . n B 1 75 C 75 75 75 C C B . n B 1 76 C 76 76 76 C C B . n B 1 77 A 77 77 77 A A B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SR 1 101 101 SR SR A . D 2 SR 1 102 201 SR SR A . E 2 SR 1 103 1 SR SR A . F 2 SR 1 104 2 SR SR A . G 2 SR 1 105 3 SR SR A . H 2 SR 1 106 4 SR SR A . I 2 SR 1 107 5 SR SR A . J 2 SR 1 108 6 SR SR A . K 2 SR 1 109 7 SR SR A . L 2 SR 1 110 18 SR SR A . M 2 SR 1 111 28 SR SR A . N 2 SR 1 112 29 SR SR A . O 2 SR 1 113 30 SR SR A . P 2 SR 1 114 31 SR SR A . Q 2 SR 1 101 9 SR SR B . R 2 SR 1 102 10 SR SR B . S 2 SR 1 103 11 SR SR B . T 2 SR 1 104 12 SR SR B . U 2 SR 1 105 13 SR SR B . V 2 SR 1 106 14 SR SR B . W 2 SR 1 107 15 SR SR B . X 2 SR 1 108 16 SR SR B . Y 2 SR 1 109 24 SR SR B . Z 2 SR 1 110 25 SR SR B . AA 2 SR 1 111 26 SR SR B . BA 2 SR 1 112 27 SR SR B . CA 2 SR 1 113 32 SR SR B . DA 3 HOH 1 201 18 HOH HOH A . DA 3 HOH 2 202 4 HOH HOH A . DA 3 HOH 3 203 7 HOH HOH A . DA 3 HOH 4 204 3 HOH HOH A . DA 3 HOH 5 205 14 HOH HOH A . DA 3 HOH 6 206 15 HOH HOH A . DA 3 HOH 7 207 17 HOH HOH A . DA 3 HOH 8 208 9 HOH HOH A . DA 3 HOH 9 209 16 HOH HOH A . DA 3 HOH 10 210 5 HOH HOH A . DA 3 HOH 11 211 13 HOH HOH A . EA 3 HOH 1 201 11 HOH HOH B . EA 3 HOH 2 202 1 HOH HOH B . EA 3 HOH 3 203 10 HOH HOH B . EA 3 HOH 4 204 8 HOH HOH B . EA 3 HOH 5 205 6 HOH HOH B . EA 3 HOH 6 206 2 HOH HOH B . EA 3 HOH 7 207 12 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . ? 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 120.641 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 12CJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 162.764 _cell.length_a_esd ? _cell.length_b 35.927 _cell.length_b_esd ? _cell.length_c 97.279 _cell.length_c_esd ? _cell.volume 489428.209 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 12CJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 12CJ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.45 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 49.7 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '10% v/v MPD, 20 mM spermine, 50 mM strontium chloride, 50 mM lithium chloride, 40 mM sodium cacodylate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-10-03 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99992 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.99992 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 12CJ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.93 _reflns.d_resolution_low 43.94 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10888 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.2 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.139 _reflns.pdbx_Rpim_I_all 0.052 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.129 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.93 _reflns_shell.d_res_low 3.01 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 802 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.485 _reflns_shell.pdbx_Rpim_I_all 0.544 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.746 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.380 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 61.77 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 12CJ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.93 _refine.ls_d_res_low 43.83 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10867 _refine.ls_number_reflns_R_free 475 _refine.ls_number_reflns_R_work 10392 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.05 _refine.ls_percent_reflns_R_free 4.37 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2036 _refine.ls_R_factor_R_free 0.2480 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2015 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 27.1561 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1915 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.93 _refine_hist.d_res_low 43.83 _refine_hist.number_atoms_solvent 18 _refine_hist.number_atoms_total 3349 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 3304 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0018 ? 3692 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.5776 ? 5748 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.0285 ? 768 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.0028 ? 154 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 16.3319 ? 1846 ? f_dihedral_angle_d ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.93 3.34 . . 139 3377 97.40 . . . . 0.2776 . . . . . . . . . . . . . . . 0.3088 'X-RAY DIFFRACTION' 3.34 4.21 . . 167 3437 99.83 . . . . 0.2038 . . . . . . . . . . . . . . . 0.2605 'X-RAY DIFFRACTION' 4.21 43.83 . . 169 3578 99.89 . . . . 0.1767 . . . . . . . . . . . . . . . 0.2194 # _struct.entry_id 12CJ _struct.title 'Apo structure of dopamine-binding aptamer, DGR-1B' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 12CJ _struct_keywords.text 'riboswitch, aptamer, dopamine, SELEX, L-DOPA, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 2 ? O N N 2 ? P N N 2 ? Q N N 2 ? R N N 2 ? S N N 2 ? T N N 2 ? U N N 2 ? V N N 2 ? W N N 2 ? X N N 2 ? Y N N 2 ? Z N N 2 ? AA N N 2 ? BA N N 2 ? CA N N 2 ? DA N N 3 ? EA N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 12CJ _struct_ref.pdbx_db_accession 12CJ _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 12CJ A 1 ? 77 ? 12CJ 1 ? 77 ? 1 77 2 1 12CJ B 1 ? 77 ? 12CJ 1 ? 77 ? 1 77 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,DA 2 1 B,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,EA # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'isothermal titration calorimetry' ? 2 2 'isothermal titration calorimetry' ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GTP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? A GTP 1 A G 2 1_555 ? ? ? ? ? ? ? 1.558 ? ? covale2 covale both ? B GTP 1 "O3'" ? ? ? 1_555 B G 2 P ? ? B GTP 1 B G 2 1_555 ? ? ? ? ? ? ? 1.560 ? ? covale3 covale none ? B GTP 1 C8 ? ? ? 1_555 B A 77 N6 ? ? B GTP 1 B A 77 2_555 ? ? ? ? ? ? ? 1.425 ? ? metalc1 metalc ? ? A GTP 1 O2B ? ? ? 1_555 L SR . SR ? ? A GTP 1 A SR 110 1_555 ? ? ? ? ? ? ? 2.556 ? ? metalc2 metalc ? ? A GTP 1 N7 ? ? ? 1_555 L SR . SR ? ? A GTP 1 A SR 110 1_555 ? ? ? ? ? ? ? 2.884 ? ? metalc3 metalc ? ? A GTP 1 O6 ? ? ? 1_555 L SR . SR ? ? A GTP 1 A SR 110 1_555 ? ? ? ? ? ? ? 2.729 ? ? metalc4 metalc ? ? A GTP 1 O1A ? ? ? 1_555 O SR . SR ? ? A GTP 1 A SR 113 1_555 ? ? ? ? ? ? ? 2.858 ? ? metalc5 metalc ? ? A GTP 1 O2A ? ? ? 1_555 O SR . SR ? ? A GTP 1 A SR 113 1_555 ? ? ? ? ? ? ? 2.775 ? ? metalc6 metalc ? ? A A 8 OP1 ? ? ? 1_555 D SR . SR ? ? A A 8 A SR 102 1_555 ? ? ? ? ? ? ? 2.544 ? ? metalc7 metalc ? ? A C 9 O2 ? ? ? 1_555 J SR . SR ? ? A C 9 A SR 108 1_545 ? ? ? ? ? ? ? 2.672 ? ? metalc8 metalc ? ? A U 10 O2 ? ? ? 1_555 K SR . SR ? ? A U 10 A SR 109 1_545 ? ? ? ? ? ? ? 2.756 ? ? metalc9 metalc ? ? A C 12 OP2 ? ? ? 1_555 C SR . SR ? ? A C 12 A SR 101 1_555 ? ? ? ? ? ? ? 2.856 ? ? metalc10 metalc ? ? A U 23 O4 ? ? ? 1_555 H SR . SR ? ? A U 23 A SR 106 1_555 ? ? ? ? ? ? ? 2.922 ? ? metalc11 metalc ? ? A A 26 OP1 ? ? ? 1_555 J SR . SR ? ? A A 26 A SR 108 1_555 ? ? ? ? ? ? ? 2.692 ? ? metalc12 metalc ? ? A U 29 OP2 ? ? ? 1_555 P SR . SR ? ? A U 29 A SR 114 1_555 ? ? ? ? ? ? ? 2.649 ? ? metalc13 metalc ? ? A G 38 O6 ? ? ? 1_555 E SR . SR ? ? A G 38 A SR 103 1_555 ? ? ? ? ? ? ? 2.700 ? ? metalc14 metalc ? ? A G 43 O6 ? ? ? 1_555 D SR . SR ? ? A G 43 A SR 102 1_555 ? ? ? ? ? ? ? 2.791 ? ? metalc15 metalc ? ? A G 49 O6 ? ? ? 1_555 G SR . SR ? ? A G 49 A SR 105 1_555 ? ? ? ? ? ? ? 2.710 ? ? metalc16 metalc ? ? A A 59 OP2 ? ? ? 1_555 I SR . SR ? ? A A 59 A SR 107 1_555 ? ? ? ? ? ? ? 2.407 ? ? metalc17 metalc ? ? A U 60 OP2 ? ? ? 1_555 H SR . SR ? ? A U 60 A SR 106 1_555 ? ? ? ? ? ? ? 2.634 ? ? metalc18 metalc ? ? A U 66 O4 ? ? ? 1_555 F SR . SR ? ? A U 66 A SR 104 1_555 ? ? ? ? ? ? ? 2.948 ? ? metalc19 metalc ? ? D SR . SR ? ? ? 1_555 DA HOH . O ? ? A SR 102 A HOH 203 1_555 ? ? ? ? ? ? ? 2.684 ? ? metalc20 metalc ? ? E SR . SR ? ? ? 1_555 DA HOH . O ? ? A SR 103 A HOH 211 1_555 ? ? ? ? ? ? ? 2.531 ? ? metalc21 metalc ? ? F SR . SR ? ? ? 1_555 DA HOH . O ? ? A SR 104 A HOH 201 1_555 ? ? ? ? ? ? ? 2.733 ? ? metalc22 metalc ? ? I SR . SR ? ? ? 1_555 DA HOH . O ? ? A SR 107 A HOH 202 1_555 ? ? ? ? ? ? ? 2.483 ? ? metalc23 metalc ? ? L SR . SR ? ? ? 1_555 DA HOH . O ? ? A SR 110 A HOH 208 1_555 ? ? ? ? ? ? ? 2.764 ? ? metalc24 metalc ? ? N SR . SR ? ? ? 1_555 DA HOH . O ? ? A SR 112 A HOH 204 1_555 ? ? ? ? ? ? ? 2.602 ? ? metalc25 metalc ? ? P SR . SR ? ? ? 1_555 DA HOH . O ? ? A SR 114 A HOH 210 1_555 ? ? ? ? ? ? ? 2.588 ? ? metalc26 metalc ? ? B GTP 1 O2B ? ? ? 1_555 Y SR . SR ? ? B GTP 1 B SR 109 1_555 ? ? ? ? ? ? ? 2.706 ? ? metalc27 metalc ? ? B GTP 1 O6 ? ? ? 1_555 Y SR . SR ? ? B GTP 1 B SR 109 1_555 ? ? ? ? ? ? ? 2.626 ? ? metalc28 metalc ? ? B A 8 OP1 ? ? ? 1_555 U SR . SR ? ? B A 8 B SR 105 1_555 ? ? ? ? ? ? ? 2.488 ? ? metalc29 metalc ? ? B C 12 OP2 ? ? ? 1_555 W SR . SR ? ? B C 12 B SR 107 1_555 ? ? ? ? ? ? ? 2.705 ? ? metalc30 metalc ? ? B U 29 OP2 ? ? ? 1_555 CA SR . SR ? ? B U 29 B SR 113 1_555 ? ? ? ? ? ? ? 2.488 ? ? metalc31 metalc ? ? B G 38 O6 ? ? ? 1_555 V SR . SR ? ? B G 38 B SR 106 1_555 ? ? ? ? ? ? ? 2.739 ? ? metalc32 metalc ? ? B G 43 O6 ? ? ? 1_555 U SR . SR ? ? B G 43 B SR 105 1_555 ? ? ? ? ? ? ? 2.858 ? ? metalc33 metalc ? ? B U 56 "O2'" ? ? ? 1_555 Q SR . SR ? ? B U 56 B SR 101 1_555 ? ? ? ? ? ? ? 2.705 ? ? metalc34 metalc ? ? B U 56 O2 ? ? ? 1_555 Q SR . SR ? ? B U 56 B SR 101 1_555 ? ? ? ? ? ? ? 2.738 ? ? metalc35 metalc ? ? B U 66 O4 ? ? ? 1_555 T SR . SR ? ? B U 66 B SR 104 1_555 ? ? ? ? ? ? ? 2.585 ? ? metalc36 metalc ? ? T SR . SR ? ? ? 1_555 EA HOH . O ? ? B SR 104 B HOH 206 1_555 ? ? ? ? ? ? ? 2.571 ? ? metalc37 metalc ? ? U SR . SR ? ? ? 1_555 EA HOH . O ? ? B SR 105 B HOH 203 1_555 ? ? ? ? ? ? ? 2.582 ? ? metalc38 metalc ? ? W SR . SR ? ? ? 1_555 EA HOH . O ? ? B SR 107 B HOH 201 1_555 ? ? ? ? ? ? ? 2.636 ? ? metalc39 metalc ? ? Y SR . SR ? ? ? 1_555 EA HOH . O ? ? B SR 109 B HOH 202 1_555 ? ? ? ? ? ? ? 2.756 ? ? metalc40 metalc ? ? Y SR . SR ? ? ? 1_555 EA HOH . O ? ? B SR 109 B HOH 202 2_555 ? ? ? ? ? ? ? 2.756 ? ? hydrog1 hydrog ? ? A GTP 1 N1 ? ? ? 1_555 A C 76 N3 ? ? A GTP 1 A C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A GTP 1 N2 ? ? ? 1_555 A C 76 O2 ? ? A GTP 1 A C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A GTP 1 O6 ? ? ? 1_555 A C 76 N4 ? ? A GTP 1 A C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 75 N3 ? ? A G 2 A C 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 75 O2 ? ? A G 2 A C 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 75 N4 ? ? A G 2 A C 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 74 N3 ? ? A A 3 A U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 74 O4 ? ? A A 3 A U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 73 N1 ? ? A C 4 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 73 O6 ? ? A C 4 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 73 N2 ? ? A C 4 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 72 N1 ? ? A U 5 A A 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 72 N6 ? ? A U 5 A A 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 71 N3 ? ? A A 6 A U 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 71 O4 ? ? A A 6 A U 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 N1 ? ? ? 1_555 A G 13 N7 ? ? A G 7 A G 13 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog17 hydrog ? ? A G 7 N2 ? ? ? 1_555 A G 13 O6 ? ? A G 7 A G 13 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog18 hydrog ? ? A G 7 N2 ? ? ? 1_555 A A 41 N1 ? ? A G 7 A A 41 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog19 hydrog ? ? A G 7 N3 ? ? ? 1_555 A A 41 N6 ? ? A G 7 A A 41 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog20 hydrog ? ? A A 8 N6 ? ? ? 1_555 A U 17 O2 ? ? A A 8 A U 17 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog21 hydrog ? ? A A 8 N7 ? ? ? 1_555 A U 17 N3 ? ? A A 8 A U 17 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog22 hydrog ? ? A A 8 N1 ? ? ? 1_555 A U 44 N3 ? ? A A 8 A U 44 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog23 hydrog ? ? A A 8 N6 ? ? ? 1_555 A U 44 O2 ? ? A A 8 A U 44 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog24 hydrog ? ? A C 11 N3 ? ? ? 1_555 A G 43 N1 ? ? A C 11 A G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 11 N4 ? ? ? 1_555 A G 43 O6 ? ? A C 11 A G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 11 O2 ? ? ? 1_555 A G 43 N2 ? ? A C 11 A G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 42 N1 ? ? A C 12 A G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 42 O6 ? ? A C 12 A G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 42 N2 ? ? A C 12 A G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A A 15 N6 ? ? ? 1_555 A U 68 O2 ? ? A A 15 A U 68 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog31 hydrog ? ? A A 15 N7 ? ? ? 1_555 A U 68 N3 ? ? A A 15 A U 68 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog32 hydrog ? ? A A 16 N3 ? ? ? 1_555 A G 43 N2 ? ? A A 16 A G 43 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog33 hydrog ? ? A A 16 N6 ? ? ? 1_555 A A 67 N1 ? ? A A 16 A A 67 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog34 hydrog ? ? A A 16 N7 ? ? ? 1_555 A A 67 N6 ? ? A A 16 A A 67 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog35 hydrog ? ? A U 18 N3 ? ? ? 1_555 A A 37 N1 ? ? A U 18 A A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A U 18 O4 ? ? ? 1_555 A A 37 N6 ? ? A U 18 A A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 20 N1 ? ? ? 1_555 A C 36 N3 ? ? A G 20 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 20 N2 ? ? ? 1_555 A C 36 O2 ? ? A G 20 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 20 O6 ? ? ? 1_555 A C 36 N4 ? ? A G 20 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 21 N3 ? ? ? 1_555 A G 35 N1 ? ? A C 21 A G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 21 N4 ? ? ? 1_555 A G 35 O6 ? ? A C 21 A G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 21 O2 ? ? ? 1_555 A G 35 N2 ? ? A C 21 A G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 22 N1 ? ? ? 1_555 A C 34 N3 ? ? A G 22 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 22 N2 ? ? ? 1_555 A C 34 O2 ? ? A G 22 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 22 O6 ? ? ? 1_555 A C 34 N4 ? ? A G 22 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A U 23 N3 ? ? ? 1_555 A A 33 N1 ? ? A U 23 A A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A U 23 O4 ? ? ? 1_555 A A 33 N6 ? ? A U 23 A A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 32 N3 ? ? A G 24 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 32 O2 ? ? A G 24 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 32 N4 ? ? A G 24 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A A 26 N1 ? ? ? 1_555 A A 59 N6 ? ? A A 26 A A 59 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog52 hydrog ? ? A A 26 N6 ? ? ? 1_555 A A 59 N7 ? ? A A 26 A A 59 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog53 hydrog ? ? A U 27 O2 ? ? ? 1_555 A G 30 N2 ? ? A U 27 A G 30 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog54 hydrog ? ? A U 27 N3 ? ? ? 1_555 A A 58 N7 ? ? A U 27 A A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog55 hydrog ? ? A U 27 O2 ? ? ? 1_555 A A 58 N6 ? ? A U 27 A A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog56 hydrog ? ? A A 28 N6 ? ? ? 1_555 A A 57 N1 ? ? A A 28 A A 57 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog57 hydrog ? ? A A 28 N7 ? ? ? 1_555 A A 57 N6 ? ? A A 28 A A 57 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog58 hydrog ? ? A G 30 N1 ? ? ? 1_555 A C 54 N3 ? ? A G 30 A C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 30 N2 ? ? ? 1_555 A C 54 O2 ? ? A G 30 A C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 30 O6 ? ? ? 1_555 A C 54 N4 ? ? A G 30 A C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 31 N1 ? ? ? 1_555 A C 53 N3 ? ? A G 31 A C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 31 N2 ? ? ? 1_555 A C 53 O2 ? ? A G 31 A C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 31 O6 ? ? ? 1_555 A C 53 N4 ? ? A G 31 A C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 31 N2 ? ? ? 1_555 A A 59 N1 ? ? A G 31 A A 59 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog65 hydrog ? ? A G 31 N3 ? ? ? 1_555 A A 59 N6 ? ? A G 31 A A 59 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog66 hydrog ? ? A G 38 N2 ? ? ? 1_555 A U 44 O4 ? ? A G 38 A U 44 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog67 hydrog ? ? A A 40 N6 ? ? ? 1_555 A U 71 O2 ? ? A A 40 A U 71 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog68 hydrog ? ? A A 45 N1 ? ? ? 1_555 A U 66 N3 ? ? A A 45 A U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A A 45 N6 ? ? ? 1_555 A U 66 O4 ? ? A A 45 A U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A U 46 N3 ? ? ? 1_555 A U 66 O2 ? ? A U 46 A U 66 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog71 hydrog ? ? A U 46 O4 ? ? ? 1_555 A U 66 N3 ? ? A U 46 A U 66 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog72 hydrog ? ? A U 47 N3 ? ? ? 1_555 A A 65 N1 ? ? A U 47 A A 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A U 47 O4 ? ? ? 1_555 A A 65 N6 ? ? A U 47 A A 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 48 N1 ? ? ? 1_555 A C 64 N3 ? ? A G 48 A C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A G 48 N2 ? ? ? 1_555 A C 64 O2 ? ? A G 48 A C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A G 48 O6 ? ? ? 1_555 A C 64 N4 ? ? A G 48 A C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 49 N1 ? ? ? 1_555 A C 63 N3 ? ? A G 49 A C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A G 49 N2 ? ? ? 1_555 A C 63 O2 ? ? A G 49 A C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A G 49 O6 ? ? ? 1_555 A C 63 N4 ? ? A G 49 A C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A G 50 N1 ? ? ? 1_555 A U 62 O2 ? ? A G 50 A U 62 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog81 hydrog ? ? A G 50 O6 ? ? ? 1_555 A U 62 N3 ? ? A G 50 A U 62 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog82 hydrog ? ? A C 51 N3 ? ? ? 1_555 A G 61 N1 ? ? A C 51 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A C 51 N4 ? ? ? 1_555 A G 61 O6 ? ? A C 51 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A C 51 O2 ? ? ? 1_555 A G 61 N2 ? ? A C 51 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A A 52 N1 ? ? ? 1_555 A U 60 N3 ? ? A A 52 A U 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A A 52 N6 ? ? ? 1_555 A U 60 O4 ? ? A A 52 A U 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A C 54 O2 ? ? ? 1_555 A A 58 N6 ? ? A C 54 A A 58 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog88 hydrog ? ? B GTP 1 N1 ? ? ? 1_555 B A 77 N1 ? ? B GTP 1 B A 77 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog89 hydrog ? ? B GTP 1 O6 ? ? ? 1_555 B A 77 N6 ? ? B GTP 1 B A 77 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog90 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 75 N3 ? ? B G 2 B C 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 75 O2 ? ? B G 2 B C 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 75 N4 ? ? B G 2 B C 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B A 3 N1 ? ? ? 1_555 B U 74 N3 ? ? B A 3 B U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B A 3 N6 ? ? ? 1_555 B U 74 O4 ? ? B A 3 B U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 73 N1 ? ? B C 4 B G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 73 O6 ? ? B C 4 B G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 73 N2 ? ? B C 4 B G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B U 5 N3 ? ? ? 1_555 B A 72 N1 ? ? B U 5 B A 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B U 5 O4 ? ? ? 1_555 B A 72 N6 ? ? B U 5 B A 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B A 6 N1 ? ? ? 1_555 B U 71 N3 ? ? B A 6 B U 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B A 6 N6 ? ? ? 1_555 B U 71 O4 ? ? B A 6 B U 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B G 7 N1 ? ? ? 1_555 B G 13 N7 ? ? B G 7 B G 13 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog103 hydrog ? ? B G 7 N2 ? ? ? 1_555 B G 13 O6 ? ? B G 7 B G 13 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog104 hydrog ? ? B G 7 N2 ? ? ? 1_555 B A 41 N1 ? ? B G 7 B A 41 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog105 hydrog ? ? B G 7 N3 ? ? ? 1_555 B A 41 N6 ? ? B G 7 B A 41 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog106 hydrog ? ? B A 8 N6 ? ? ? 1_555 B U 17 O2 ? ? B A 8 B U 17 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog107 hydrog ? ? B A 8 N7 ? ? ? 1_555 B U 17 N3 ? ? B A 8 B U 17 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog108 hydrog ? ? B A 8 N1 ? ? ? 1_555 B U 44 N3 ? ? B A 8 B U 44 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog109 hydrog ? ? B A 8 N6 ? ? ? 1_555 B U 44 O2 ? ? B A 8 B U 44 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog110 hydrog ? ? B C 11 N3 ? ? ? 1_555 B G 43 N1 ? ? B C 11 B G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B C 11 N4 ? ? ? 1_555 B G 43 O6 ? ? B C 11 B G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B C 11 O2 ? ? ? 1_555 B G 43 N2 ? ? B C 11 B G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 42 N1 ? ? B C 12 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 42 O6 ? ? B C 12 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 42 N2 ? ? B C 12 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? B G 13 O6 ? ? ? 1_555 B G 42 N2 ? ? B G 13 B G 42 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog117 hydrog ? ? B G 13 N3 ? ? ? 1_555 B G 69 N2 ? ? B G 13 B G 69 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog118 hydrog ? ? B A 15 N6 ? ? ? 1_555 B U 68 O2 ? ? B A 15 B U 68 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog119 hydrog ? ? B A 15 N7 ? ? ? 1_555 B U 68 N3 ? ? B A 15 B U 68 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog120 hydrog ? ? B A 16 N3 ? ? ? 1_555 B G 43 N2 ? ? B A 16 B G 43 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog121 hydrog ? ? B A 16 N6 ? ? ? 1_555 B A 67 N1 ? ? B A 16 B A 67 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog122 hydrog ? ? B A 16 N7 ? ? ? 1_555 B A 67 N6 ? ? B A 16 B A 67 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog123 hydrog ? ? B U 18 N3 ? ? ? 1_555 B A 37 N1 ? ? B U 18 B A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B U 18 O4 ? ? ? 1_555 B A 37 N6 ? ? B U 18 B A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B G 20 N1 ? ? ? 1_555 B C 36 N3 ? ? B G 20 B C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B G 20 N2 ? ? ? 1_555 B C 36 O2 ? ? B G 20 B C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B G 20 O6 ? ? ? 1_555 B C 36 N4 ? ? B G 20 B C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B C 21 N3 ? ? ? 1_555 B G 35 N1 ? ? B C 21 B G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B C 21 N4 ? ? ? 1_555 B G 35 O6 ? ? B C 21 B G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B C 21 O2 ? ? ? 1_555 B G 35 N2 ? ? B C 21 B G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B G 22 N1 ? ? ? 1_555 B C 34 N3 ? ? B G 22 B C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B G 22 N2 ? ? ? 1_555 B C 34 O2 ? ? B G 22 B C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B G 22 O6 ? ? ? 1_555 B C 34 N4 ? ? B G 22 B C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B U 23 N3 ? ? ? 1_555 B A 33 N1 ? ? B U 23 B A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? B U 23 O4 ? ? ? 1_555 B A 33 N6 ? ? B U 23 B A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? B G 24 N1 ? ? ? 1_555 B C 32 N3 ? ? B G 24 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? B G 24 N2 ? ? ? 1_555 B C 32 O2 ? ? B G 24 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? B G 24 O6 ? ? ? 1_555 B C 32 N4 ? ? B G 24 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? B A 26 N1 ? ? ? 1_555 B A 59 N6 ? ? B A 26 B A 59 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog140 hydrog ? ? B A 26 N6 ? ? ? 1_555 B A 59 N7 ? ? B A 26 B A 59 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog141 hydrog ? ? B U 27 O2 ? ? ? 1_555 B G 30 N2 ? ? B U 27 B G 30 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog142 hydrog ? ? B U 27 N3 ? ? ? 1_555 B A 58 N7 ? ? B U 27 B A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog143 hydrog ? ? B U 27 O2 ? ? ? 1_555 B A 58 N6 ? ? B U 27 B A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog144 hydrog ? ? B A 28 N6 ? ? ? 1_555 B A 57 N1 ? ? B A 28 B A 57 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog145 hydrog ? ? B A 28 N7 ? ? ? 1_555 B A 57 N6 ? ? B A 28 B A 57 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog146 hydrog ? ? B G 30 N1 ? ? ? 1_555 B C 54 N3 ? ? B G 30 B C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? B G 30 N2 ? ? ? 1_555 B C 54 O2 ? ? B G 30 B C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? B G 30 O6 ? ? ? 1_555 B C 54 N4 ? ? B G 30 B C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? B G 31 N1 ? ? ? 1_555 B C 53 N3 ? ? B G 31 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? B G 31 N2 ? ? ? 1_555 B C 53 O2 ? ? B G 31 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? B G 31 O6 ? ? ? 1_555 B C 53 N4 ? ? B G 31 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? B G 31 N2 ? ? ? 1_555 B A 59 N1 ? ? B G 31 B A 59 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog153 hydrog ? ? B G 31 N3 ? ? ? 1_555 B A 59 N6 ? ? B G 31 B A 59 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog154 hydrog ? ? B G 38 N2 ? ? ? 1_555 B U 44 O4 ? ? B G 38 B U 44 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog155 hydrog ? ? B A 40 N6 ? ? ? 1_555 B U 71 O2 ? ? B A 40 B U 71 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog156 hydrog ? ? B U 46 N3 ? ? ? 1_555 B U 66 O2 ? ? B U 46 B U 66 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog157 hydrog ? ? B U 46 O4 ? ? ? 1_555 B U 66 N3 ? ? B U 46 B U 66 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog158 hydrog ? ? B U 47 N3 ? ? ? 1_555 B A 65 N1 ? ? B U 47 B A 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? B U 47 O4 ? ? ? 1_555 B A 65 N6 ? ? B U 47 B A 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog160 hydrog ? ? B G 48 N1 ? ? ? 1_555 B C 64 N3 ? ? B G 48 B C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog161 hydrog ? ? B G 48 N2 ? ? ? 1_555 B C 64 O2 ? ? B G 48 B C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? B G 48 O6 ? ? ? 1_555 B C 64 N4 ? ? B G 48 B C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? B G 49 N1 ? ? ? 1_555 B C 63 N3 ? ? B G 49 B C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? B G 49 N2 ? ? ? 1_555 B C 63 O2 ? ? B G 49 B C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog165 hydrog ? ? B G 49 O6 ? ? ? 1_555 B C 63 N4 ? ? B G 49 B C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog166 hydrog ? ? B G 50 N1 ? ? ? 1_555 B U 62 O2 ? ? B G 50 B U 62 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog167 hydrog ? ? B G 50 O6 ? ? ? 1_555 B U 62 N3 ? ? B G 50 B U 62 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog168 hydrog ? ? B C 51 N3 ? ? ? 1_555 B G 61 N1 ? ? B C 51 B G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog169 hydrog ? ? B C 51 N4 ? ? ? 1_555 B G 61 O6 ? ? B C 51 B G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog170 hydrog ? ? B C 51 O2 ? ? ? 1_555 B G 61 N2 ? ? B C 51 B G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog171 hydrog ? ? B A 52 N1 ? ? ? 1_555 B U 60 N3 ? ? B A 52 B U 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog172 hydrog ? ? B A 52 N6 ? ? ? 1_555 B U 60 O4 ? ? B A 52 B U 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog173 hydrog ? ? B C 54 O2 ? ? ? 1_555 B A 58 N6 ? ? B C 54 B A 58 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O2B ? A GTP 1 ? A GTP 1 ? 1_555 SR ? L SR . ? A SR 110 ? 1_555 N7 ? A GTP 1 ? A GTP 1 ? 1_555 74.6 ? 2 O2B ? A GTP 1 ? A GTP 1 ? 1_555 SR ? L SR . ? A SR 110 ? 1_555 O6 ? A GTP 1 ? A GTP 1 ? 1_555 129.2 ? 3 N7 ? A GTP 1 ? A GTP 1 ? 1_555 SR ? L SR . ? A SR 110 ? 1_555 O6 ? A GTP 1 ? A GTP 1 ? 1_555 62.7 ? 4 O2B ? A GTP 1 ? A GTP 1 ? 1_555 SR ? L SR . ? A SR 110 ? 1_555 O ? DA HOH . ? A HOH 208 ? 1_555 70.3 ? 5 N7 ? A GTP 1 ? A GTP 1 ? 1_555 SR ? L SR . ? A SR 110 ? 1_555 O ? DA HOH . ? A HOH 208 ? 1_555 69.9 ? 6 O6 ? A GTP 1 ? A GTP 1 ? 1_555 SR ? L SR . ? A SR 110 ? 1_555 O ? DA HOH . ? A HOH 208 ? 1_555 70.1 ? 7 O1A ? A GTP 1 ? A GTP 1 ? 1_555 SR ? O SR . ? A SR 113 ? 1_555 O2A ? A GTP 1 ? A GTP 1 ? 1_555 52.3 ? 8 OP1 ? A A 8 ? A A 8 ? 1_555 SR ? D SR . ? A SR 102 ? 1_555 O6 ? A G 43 ? A G 43 ? 1_555 100.2 ? 9 OP1 ? A A 8 ? A A 8 ? 1_555 SR ? D SR . ? A SR 102 ? 1_555 O ? DA HOH . ? A HOH 203 ? 1_555 57.4 ? 10 O6 ? A G 43 ? A G 43 ? 1_555 SR ? D SR . ? A SR 102 ? 1_555 O ? DA HOH . ? A HOH 203 ? 1_555 145.0 ? 11 O2 ? A C 9 ? A C 9 ? 1_555 SR ? J SR . ? A SR 108 ? 1_545 OP1 ? A A 26 ? A A 26 ? 1_555 110.6 ? 12 O4 ? A U 23 ? A U 23 ? 1_555 SR ? H SR . ? A SR 106 ? 1_555 OP2 ? A U 60 ? A U 60 ? 1_555 124.4 ? 13 OP2 ? A U 29 ? A U 29 ? 1_555 SR ? P SR . ? A SR 114 ? 1_555 O ? DA HOH . ? A HOH 210 ? 1_555 84.1 ? 14 O6 ? A G 38 ? A G 38 ? 1_555 SR ? E SR . ? A SR 103 ? 1_555 O ? DA HOH . ? A HOH 211 ? 1_555 155.0 ? 15 OP2 ? A A 59 ? A A 59 ? 1_555 SR ? I SR . ? A SR 107 ? 1_555 O ? DA HOH . ? A HOH 202 ? 1_555 140.4 ? 16 O4 ? A U 66 ? A U 66 ? 1_555 SR ? F SR . ? A SR 104 ? 1_555 O ? DA HOH . ? A HOH 201 ? 1_555 47.6 ? 17 O2B ? B GTP 1 ? B GTP 1 ? 1_555 SR ? Y SR . ? B SR 109 ? 1_555 O6 ? B GTP 1 ? B GTP 1 ? 1_555 107.9 ? 18 O2B ? B GTP 1 ? B GTP 1 ? 1_555 SR ? Y SR . ? B SR 109 ? 1_555 O ? EA HOH . ? B HOH 202 ? 1_555 78.8 ? 19 O6 ? B GTP 1 ? B GTP 1 ? 1_555 SR ? Y SR . ? B SR 109 ? 1_555 O ? EA HOH . ? B HOH 202 ? 1_555 52.3 ? 20 O2B ? B GTP 1 ? B GTP 1 ? 1_555 SR ? Y SR . ? B SR 109 ? 1_555 O ? EA HOH . ? B HOH 202 ? 2_555 78.8 ? 21 O6 ? B GTP 1 ? B GTP 1 ? 1_555 SR ? Y SR . ? B SR 109 ? 1_555 O ? EA HOH . ? B HOH 202 ? 2_555 52.3 ? 22 O ? EA HOH . ? B HOH 202 ? 1_555 SR ? Y SR . ? B SR 109 ? 1_555 O ? EA HOH . ? B HOH 202 ? 2_555 0.0 ? 23 OP1 ? B A 8 ? B A 8 ? 1_555 SR ? U SR . ? B SR 105 ? 1_555 O6 ? B G 43 ? B G 43 ? 1_555 103.3 ? 24 OP1 ? B A 8 ? B A 8 ? 1_555 SR ? U SR . ? B SR 105 ? 1_555 O ? EA HOH . ? B HOH 203 ? 1_555 161.5 ? 25 O6 ? B G 43 ? B G 43 ? 1_555 SR ? U SR . ? B SR 105 ? 1_555 O ? EA HOH . ? B HOH 203 ? 1_555 73.4 ? 26 OP2 ? B C 12 ? B C 12 ? 1_555 SR ? W SR . ? B SR 107 ? 1_555 O ? EA HOH . ? B HOH 201 ? 1_555 94.7 ? 27 "O2'" ? B U 56 ? B U 56 ? 1_555 SR ? Q SR . ? B SR 101 ? 1_555 O2 ? B U 56 ? B U 56 ? 1_555 66.1 ? 28 O4 ? B U 66 ? B U 66 ? 1_555 SR ? T SR . ? B SR 104 ? 1_555 O ? EA HOH . ? B HOH 206 ? 1_555 73.9 ? # _pdbx_entry_details.entry_id 12CJ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 N7 B GTP 1 ? ? 1_555 N6 B A 77 ? ? 2_555 1.73 2 1 C8 B GTP 1 ? ? 1_555 C6 B A 77 ? ? 2_555 1.92 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" A GTP 1 ? ? P A G 2 ? ? "O5'" A G 2 ? ? 92.18 104.00 -11.82 1.90 Y 2 1 "O3'" A GTP 1 ? ? P A G 2 ? ? OP2 A G 2 ? ? 124.15 110.50 13.65 1.10 Y 3 1 "C3'" B GTP 1 ? ? "O3'" B GTP 1 ? ? P B G 2 ? ? 102.66 119.70 -17.04 1.20 Y 4 1 "O3'" B GTP 1 ? ? P B G 2 ? ? "O5'" B G 2 ? ? 118.41 104.00 14.41 1.90 Y # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 202 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id EA _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 GTP PG P N N 111 GTP O1G O N N 112 GTP O2G O N N 113 GTP O3G O N N 114 GTP O3B O N N 115 GTP PB P N N 116 GTP O1B O N N 117 GTP O2B O N N 118 GTP O3A O N N 119 GTP PA P N N 120 GTP O1A O N N 121 GTP O2A O N N 122 GTP "O5'" O N N 123 GTP "C5'" C N N 124 GTP "C4'" C N R 125 GTP "O4'" O N N 126 GTP "C3'" C N S 127 GTP "O3'" O N N 128 GTP "C2'" C N R 129 GTP "O2'" O N N 130 GTP "C1'" C N R 131 GTP N9 N Y N 132 GTP C8 C Y N 133 GTP N7 N Y N 134 GTP C5 C Y N 135 GTP C6 C N N 136 GTP O6 O N N 137 GTP N1 N N N 138 GTP C2 C N N 139 GTP N2 N N N 140 GTP N3 N N N 141 GTP C4 C Y N 142 GTP HOG2 H N N 143 GTP HOG3 H N N 144 GTP HOB2 H N N 145 GTP HOA2 H N N 146 GTP "H5'" H N N 147 GTP "H5''" H N N 148 GTP "H4'" H N N 149 GTP "H3'" H N N 150 GTP "HO3'" H N N 151 GTP "H2'" H N N 152 GTP "HO2'" H N N 153 GTP "H1'" H N N 154 GTP H8 H N N 155 GTP HN1 H N N 156 GTP HN21 H N N 157 GTP HN22 H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 SR SR SR N N 162 U OP3 O N N 163 U P P N N 164 U OP1 O N N 165 U OP2 O N N 166 U "O5'" O N N 167 U "C5'" C N N 168 U "C4'" C N R 169 U "O4'" O N N 170 U "C3'" C N S 171 U "O3'" O N N 172 U "C2'" C N R 173 U "O2'" O N N 174 U "C1'" C N R 175 U N1 N N N 176 U C2 C N N 177 U O2 O N N 178 U N3 N N N 179 U C4 C N N 180 U O4 O N N 181 U C5 C N N 182 U C6 C N N 183 U HOP3 H N N 184 U HOP2 H N N 185 U "H5'" H N N 186 U "H5''" H N N 187 U "H4'" H N N 188 U "H3'" H N N 189 U "HO3'" H N N 190 U "H2'" H N N 191 U "HO2'" H N N 192 U "H1'" H N N 193 U H3 H N N 194 U H5 H N N 195 U H6 H N N 196 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 GTP PG O1G doub N N 116 GTP PG O2G sing N N 117 GTP PG O3G sing N N 118 GTP PG O3B sing N N 119 GTP O2G HOG2 sing N N 120 GTP O3G HOG3 sing N N 121 GTP O3B PB sing N N 122 GTP PB O1B doub N N 123 GTP PB O2B sing N N 124 GTP PB O3A sing N N 125 GTP O2B HOB2 sing N N 126 GTP O3A PA sing N N 127 GTP PA O1A doub N N 128 GTP PA O2A sing N N 129 GTP PA "O5'" sing N N 130 GTP O2A HOA2 sing N N 131 GTP "O5'" "C5'" sing N N 132 GTP "C5'" "C4'" sing N N 133 GTP "C5'" "H5'" sing N N 134 GTP "C5'" "H5''" sing N N 135 GTP "C4'" "O4'" sing N N 136 GTP "C4'" "C3'" sing N N 137 GTP "C4'" "H4'" sing N N 138 GTP "O4'" "C1'" sing N N 139 GTP "C3'" "O3'" sing N N 140 GTP "C3'" "C2'" sing N N 141 GTP "C3'" "H3'" sing N N 142 GTP "O3'" "HO3'" sing N N 143 GTP "C2'" "O2'" sing N N 144 GTP "C2'" "C1'" sing N N 145 GTP "C2'" "H2'" sing N N 146 GTP "O2'" "HO2'" sing N N 147 GTP "C1'" N9 sing N N 148 GTP "C1'" "H1'" sing N N 149 GTP N9 C8 sing Y N 150 GTP N9 C4 sing Y N 151 GTP C8 N7 doub Y N 152 GTP C8 H8 sing N N 153 GTP N7 C5 sing Y N 154 GTP C5 C6 sing N N 155 GTP C5 C4 doub Y N 156 GTP C6 O6 doub N N 157 GTP C6 N1 sing N N 158 GTP N1 C2 sing N N 159 GTP N1 HN1 sing N N 160 GTP C2 N2 sing N N 161 GTP C2 N3 doub N N 162 GTP N2 HN21 sing N N 163 GTP N2 HN22 sing N N 164 GTP N3 C4 sing N N 165 HOH O H1 sing N N 166 HOH O H2 sing N N 167 U OP3 P sing N N 168 U OP3 HOP3 sing N N 169 U P OP1 doub N N 170 U P OP2 sing N N 171 U P "O5'" sing N N 172 U OP2 HOP2 sing N N 173 U "O5'" "C5'" sing N N 174 U "C5'" "C4'" sing N N 175 U "C5'" "H5'" sing N N 176 U "C5'" "H5''" sing N N 177 U "C4'" "O4'" sing N N 178 U "C4'" "C3'" sing N N 179 U "C4'" "H4'" sing N N 180 U "O4'" "C1'" sing N N 181 U "C3'" "O3'" sing N N 182 U "C3'" "C2'" sing N N 183 U "C3'" "H3'" sing N N 184 U "O3'" "HO3'" sing N N 185 U "C2'" "O2'" sing N N 186 U "C2'" "C1'" sing N N 187 U "C2'" "H2'" sing N N 188 U "O2'" "HO2'" sing N N 189 U "C1'" N1 sing N N 190 U "C1'" "H1'" sing N N 191 U N1 C2 sing N N 192 U N1 C6 sing N N 193 U C2 O2 doub N N 194 U C2 N3 sing N N 195 U N3 C4 sing N N 196 U N3 H3 sing N N 197 U C4 O4 doub N N 198 U C4 C5 sing N N 199 U C5 C6 doub N N 200 U C5 H5 sing N N 201 U C6 H6 sing N N 202 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 12CJ 'double helix' 12CJ 'a-form double helix' 12CJ 'mismatched base pair' 12CJ 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A GTP 1 1_555 A C 76 1_555 0.234 -0.101 0.396 2.598 -6.322 -5.250 1 A_GTP1:C76_A A 1 ? A 76 ? 19 1 1 A G 2 1_555 A C 75 1_555 -0.191 -0.103 0.000 1.085 -16.710 -0.571 2 A_G2:C75_A A 2 ? A 75 ? 19 1 1 A A 3 1_555 A U 74 1_555 0.073 -0.165 0.081 3.541 -14.129 3.628 3 A_A3:U74_A A 3 ? A 74 ? 20 1 1 A C 4 1_555 A G 73 1_555 -0.172 -0.105 -0.190 7.736 -13.994 -0.073 4 A_C4:G73_A A 4 ? A 73 ? 19 1 1 A U 5 1_555 A A 72 1_555 -0.345 -0.150 0.364 -2.605 -14.292 1.134 5 A_U5:A72_A A 5 ? A 72 ? 20 1 1 A A 6 1_555 A U 71 1_555 -0.126 0.068 0.568 -9.934 -9.920 -4.241 6 A_A6:U71_A A 6 ? A 71 ? 20 1 1 A G 7 1_555 A A 41 1_555 3.660 -3.628 -0.346 -2.778 10.340 -66.920 7 A_G7:A41_A A 7 ? A 41 ? 10 6 1 A C 12 1_555 A G 42 1_555 0.147 -0.152 0.169 0.225 -10.428 -3.703 8 A_C12:G42_A A 12 ? A 42 ? 19 1 1 A C 11 1_555 A G 43 1_555 -0.023 -0.005 -0.229 14.597 -26.753 5.050 9 A_C11:G43_A A 11 ? A 43 ? 19 1 1 A A 8 1_555 A U 44 1_555 -0.153 0.533 -0.214 17.000 -18.450 174.452 10 A_A8:U44_A A 8 ? A 44 ? 21 2 1 A A 37 1_555 A U 18 1_555 -0.105 0.328 -0.913 -26.769 -11.283 8.417 11 A_A37:U18_A A 37 ? A 18 ? 20 1 1 A C 36 1_555 A G 20 1_555 -0.154 0.234 0.024 -2.594 -22.431 6.133 12 A_C36:G20_A A 36 ? A 20 ? 19 1 1 A G 35 1_555 A C 21 1_555 -0.125 -0.492 0.014 1.288 -10.238 -1.235 13 A_G35:C21_A A 35 ? A 21 ? 19 1 1 A C 34 1_555 A G 22 1_555 -0.176 -0.193 0.205 6.196 -12.275 -3.631 14 A_C34:G22_A A 34 ? A 22 ? 19 1 1 A A 33 1_555 A U 23 1_555 0.190 0.219 0.319 -7.882 -6.502 2.432 15 A_A33:U23_A A 33 ? A 23 ? 20 1 1 A C 32 1_555 A G 24 1_555 -0.113 -0.039 0.323 -14.684 -4.518 2.183 16 A_C32:G24_A A 32 ? A 24 ? 19 1 1 A A 15 1_555 A U 68 1_555 -4.278 -1.653 -0.395 2.592 -15.729 -99.731 17 A_A15:U68_A A 15 ? A 68 ? 24 4 1 A A 16 1_555 A A 67 1_555 -3.985 2.512 -0.401 9.923 -27.453 -117.627 18 A_A16:A67_A A 16 ? A 67 ? 5 4 1 A A 28 1_555 A A 57 1_555 -4.461 1.155 -0.005 -6.520 -3.482 -108.833 19 A_A28:A57_A A 28 ? A 57 ? 5 4 1 A C 54 1_555 A G 30 1_555 -0.357 -0.171 0.340 2.133 -14.932 -8.582 20 A_C54:G30_A A 54 ? A 30 ? 19 1 1 A U 27 1_555 A A 58 1_555 4.284 -1.739 -0.464 -6.550 1.580 -104.657 21 A_U27:A58_A A 27 ? A 58 ? 24 4 1 A G 31 1_555 A C 53 1_555 -0.501 -0.078 0.351 20.757 -9.039 0.293 22 A_G31:C53_A A 31 ? A 53 ? 19 1 1 A U 60 1_555 A A 52 1_555 -0.376 0.152 -0.307 9.923 -6.931 2.829 23 A_U60:A52_A A 60 ? A 52 ? 20 1 1 A G 61 1_555 A C 51 1_555 -0.226 0.040 0.063 -2.553 -12.229 4.302 24 A_G61:C51_A A 61 ? A 51 ? 19 1 1 A U 62 1_555 A G 50 1_555 2.246 -0.450 0.083 -4.394 -5.149 2.454 25 A_U62:G50_A A 62 ? A 50 ? 28 1 1 A C 63 1_555 A G 49 1_555 -0.297 0.265 0.117 -1.424 -9.322 3.294 26 A_C63:G49_A A 63 ? A 49 ? 19 1 1 A C 64 1_555 A G 48 1_555 0.025 0.141 -0.253 1.920 -5.004 -1.913 27 A_C64:G48_A A 64 ? A 48 ? 19 1 1 A A 65 1_555 A U 47 1_555 0.113 0.482 -0.196 -8.180 -20.884 10.147 28 A_A65:U47_A A 65 ? A 47 ? 20 1 1 A U 66 1_555 A U 46 1_555 2.767 -2.103 0.624 3.260 -23.209 10.447 29 A_U66:U46_A A 66 ? A 46 ? 16 1 1 B GTP 1 1_555 B A 77 1_555 0.230 -0.059 2.482 -19.577 18.350 26.183 30 B_GTP1:A77_B B 1 ? B 77 ? 8 1 1 B G 2 1_555 B C 75 1_555 0.438 0.318 -0.441 -7.134 -7.948 1.938 31 B_G2:C75_B B 2 ? B 75 ? 19 1 1 B A 3 1_555 B U 74 1_555 -0.479 -0.004 -0.222 -6.078 -5.237 -0.256 32 B_A3:U74_B B 3 ? B 74 ? 20 1 1 B C 4 1_555 B G 73 1_555 -0.515 0.475 -0.400 5.154 -8.300 1.203 33 B_C4:G73_B B 4 ? B 73 ? 19 1 1 B U 5 1_555 B A 72 1_555 -0.446 -0.031 -0.265 1.699 -16.257 -1.929 34 B_U5:A72_B B 5 ? B 72 ? 20 1 1 B A 6 1_555 B U 71 1_555 0.022 -0.102 0.073 -6.674 -13.339 -4.241 35 B_A6:U71_B B 6 ? B 71 ? 20 1 1 B G 7 1_555 B A 41 1_555 4.188 -3.564 0.028 -9.977 12.775 -62.878 36 B_G7:A41_B B 7 ? B 41 ? 10 6 1 B C 12 1_555 B G 42 1_555 0.442 -0.256 0.457 -2.880 -11.618 -4.827 37 B_C12:G42_B B 12 ? B 42 ? 19 1 1 B C 11 1_555 B G 43 1_555 -0.168 0.033 0.586 4.861 -19.196 4.235 38 B_C11:G43_B B 11 ? B 43 ? 19 1 1 B A 8 1_555 B U 44 1_555 -0.212 0.697 -0.465 16.069 -27.567 170.401 39 B_A8:U44_B B 8 ? B 44 ? 21 2 1 B A 37 1_555 B U 18 1_555 -0.154 0.153 -0.245 -20.809 1.544 4.827 40 B_A37:U18_B B 37 ? B 18 ? 20 1 1 B C 36 1_555 B G 20 1_555 0.127 0.111 0.195 -10.284 -19.632 -5.100 41 B_C36:G20_B B 36 ? B 20 ? 19 1 1 B G 35 1_555 B C 21 1_555 -0.226 -0.257 0.101 0.402 -12.009 -2.230 42 B_G35:C21_B B 35 ? B 21 ? 19 1 1 B C 34 1_555 B G 22 1_555 -0.126 0.032 0.147 5.474 -6.605 -0.218 43 B_C34:G22_B B 34 ? B 22 ? 19 1 1 B A 33 1_555 B U 23 1_555 0.619 -0.063 0.061 -2.716 2.160 -2.824 44 B_A33:U23_B B 33 ? B 23 ? 20 1 1 B C 32 1_555 B G 24 1_555 0.026 -0.123 0.145 -10.027 -4.260 1.316 45 B_C32:G24_B B 32 ? B 24 ? 19 1 1 B G 13 1_555 B G 69 1_555 -3.474 -8.383 1.568 23.670 2.573 -172.485 46 B_G13:G69_B B 13 ? B 69 ? ? 12 1 B A 15 1_555 B U 68 1_555 -4.118 -2.234 -0.018 -1.281 -8.649 -96.474 47 B_A15:U68_B B 15 ? B 68 ? 24 4 1 B A 16 1_555 B A 67 1_555 -4.151 1.439 -0.330 18.501 -22.618 -110.633 48 B_A16:A67_B B 16 ? B 67 ? 5 4 1 B A 28 1_555 B A 57 1_555 -4.456 1.308 0.224 2.646 6.570 -111.205 49 B_A28:A57_B B 28 ? B 57 ? 5 4 1 B C 54 1_555 B G 30 1_555 -0.136 -0.183 0.913 -6.342 -9.002 -5.535 50 B_C54:G30_B B 54 ? B 30 ? 19 1 1 B A 58 1_555 B U 27 1_555 -4.181 -2.103 -0.672 -0.929 -0.500 -99.865 51 B_A58:U27_B B 58 ? B 27 ? 24 4 1 B G 31 1_555 B C 53 1_555 -0.581 0.189 0.565 22.598 -6.818 5.339 52 B_G31:C53_B B 31 ? B 53 ? 19 1 1 B U 60 1_555 B A 52 1_555 0.045 0.048 -0.304 5.382 -11.659 -0.313 53 B_U60:A52_B B 60 ? B 52 ? 20 1 1 B G 61 1_555 B C 51 1_555 -0.444 0.013 -0.059 -1.595 -9.189 2.065 54 B_G61:C51_B B 61 ? B 51 ? 19 1 1 B U 62 1_555 B G 50 1_555 1.851 -0.446 -0.176 6.804 -7.015 0.475 55 B_U62:G50_B B 62 ? B 50 ? 28 1 1 B C 63 1_555 B G 49 1_555 -0.093 -0.028 -0.316 3.621 -5.797 4.129 56 B_C63:G49_B B 63 ? B 49 ? 19 1 1 B C 64 1_555 B G 48 1_555 -0.357 -0.058 -0.269 1.233 4.244 -3.633 57 B_C64:G48_B B 64 ? B 48 ? 19 1 1 B A 65 1_555 B U 47 1_555 0.062 -0.150 0.323 13.415 0.070 3.073 58 B_A65:U47_B B 65 ? B 47 ? 20 1 1 B U 66 1_555 B U 46 1_555 2.555 -1.828 0.241 24.272 -14.093 13.363 59 B_U66:U46_B B 66 ? B 46 ? 16 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A GTP 1 1_555 A C 76 1_555 A G 2 1_555 A C 75 1_555 -0.113 -1.614 3.308 1.495 4.019 32.410 -3.551 0.455 3.082 7.162 -2.663 32.685 1 AA_GTP1G2:C75C76_AA A 1 ? A 76 ? A 2 ? A 75 ? 1 A G 2 1_555 A C 75 1_555 A A 3 1_555 A U 74 1_555 0.099 -1.190 3.158 -0.772 4.717 34.635 -2.652 -0.275 2.972 7.877 1.289 34.953 2 AA_G2A3:U74C75_AA A 2 ? A 75 ? A 3 ? A 74 ? 1 A A 3 1_555 A U 74 1_555 A C 4 1_555 A G 73 1_555 0.221 -1.298 3.242 3.600 1.990 30.966 -2.781 0.261 3.160 3.706 -6.705 31.231 3 AA_A3C4:G73U74_AA A 3 ? A 74 ? A 4 ? A 73 ? 1 A C 4 1_555 A G 73 1_555 A U 5 1_555 A A 72 1_555 0.327 -1.619 3.362 -1.862 10.522 31.485 -4.507 -0.868 2.674 18.727 3.314 33.205 4 AA_C4U5:A72G73_AA A 4 ? A 73 ? A 5 ? A 72 ? 1 A U 5 1_555 A A 72 1_555 A A 6 1_555 A U 71 1_555 0.157 -1.761 3.201 0.554 6.130 35.882 -3.618 -0.179 2.873 9.860 -0.892 36.389 5 AA_U5A6:U71A72_AA A 5 ? A 72 ? A 6 ? A 71 ? 1 A A 6 1_555 A U 71 1_555 A G 7 1_555 A A 41 1_555 -2.533 -0.640 3.386 5.862 -9.425 62.803 -0.188 2.661 3.220 -8.970 -5.579 63.678 6 AA_A6G7:A41U71_AA A 6 ? A 71 ? A 7 ? A 41 ? 1 A G 7 1_555 A A 41 1_555 A C 12 1_555 A G 42 1_555 -1.635 2.735 -0.910 151.991 86.355 -169.250 -1.347 -0.855 -0.900 -43.183 76.005 -179.514 7 AA_G7C12:G42A41_AA A 7 ? A 41 ? A 12 ? A 42 ? 1 A C 12 1_555 A G 42 1_555 A C 11 1_555 A G 43 1_555 0.150 1.730 -3.834 0.859 -2.833 -34.034 -3.462 0.099 -3.684 4.829 1.465 -34.159 8 AA_C12C11:G43G42_AA A 12 ? A 42 ? A 11 ? A 43 ? 1 A C 11 1_555 A G 43 1_555 A A 8 1_555 A U 44 1_555 2.450 2.282 0.082 -76.018 156.438 -96.962 -1.055 1.268 -0.589 -78.904 -38.342 -175.977 9 AA_C11A8:U44G43_AA A 11 ? A 43 ? A 8 ? A 44 ? 1 A A 8 1_555 A U 44 1_555 A A 37 1_555 A U 18 1_555 -4.161 -2.584 -4.123 -165.344 23.007 142.251 -1.215 2.640 -2.693 11.552 83.017 175.782 10 AA_A8A37:U18U44_AA A 8 ? A 44 ? A 37 ? A 18 ? 1 A A 37 1_555 A U 18 1_555 A C 36 1_555 A G 20 1_555 -2.031 -0.893 -3.681 -19.271 -7.073 -50.063 0.432 -0.732 -4.229 7.983 -21.751 -53.856 11 AA_A37C36:G20U18_AA A 37 ? A 18 ? A 36 ? A 20 ? 1 A C 36 1_555 A G 20 1_555 A G 35 1_555 A C 21 1_555 -0.376 1.477 -3.415 -3.922 -2.662 -36.431 -2.720 -0.043 -3.324 4.236 -6.241 -36.727 12 AA_C36G35:C21G20_AA A 36 ? A 20 ? A 35 ? A 21 ? 1 A G 35 1_555 A C 21 1_555 A C 34 1_555 A G 22 1_555 -0.424 1.973 -3.399 0.198 -2.617 -28.104 -4.663 -0.916 -3.203 5.375 0.406 -28.224 13 AA_G35C34:G22C21_AA A 35 ? A 21 ? A 34 ? A 22 ? 1 A C 34 1_555 A G 22 1_555 A A 33 1_555 A U 23 1_555 0.706 1.764 -2.980 0.802 3.552 -29.793 -2.716 1.207 -3.182 -6.876 1.552 -30.009 14 AA_C34A33:U23G22_AA A 34 ? A 22 ? A 33 ? A 23 ? 1 A A 33 1_555 A U 23 1_555 A C 32 1_555 A G 24 1_555 -0.500 1.607 -2.835 -3.110 -10.080 -26.958 -4.986 -0.457 -2.150 20.646 -6.370 -28.912 15 AA_A33C32:G24U23_AA A 33 ? A 23 ? A 32 ? A 24 ? 1 A A 15 1_555 A U 68 1_555 A A 16 1_555 A A 67 1_555 0.730 -1.243 3.145 14.903 -9.074 34.966 -0.702 0.814 3.385 -14.071 -23.110 38.956 16 AA_A15A16:A67U68_AA A 15 ? A 68 ? A 16 ? A 67 ? 1 A A 28 1_555 A A 57 1_555 A C 54 1_555 A G 30 1_555 4.213 0.119 -3.786 -1.209 -3.967 134.476 0.035 -2.275 -3.806 -2.151 0.656 134.507 17 AA_A28C54:G30A57_AA A 28 ? A 57 ? A 54 ? A 30 ? 1 A C 54 1_555 A G 30 1_555 A U 27 1_555 A A 58 1_555 -5.480 -4.552 1.283 -1.769 -28.780 -112.565 2.785 -3.255 0.466 17.142 -1.054 -114.956 18 AA_C54U27:A58G30_AA A 54 ? A 30 ? A 27 ? A 58 ? 1 A G 31 1_555 A C 53 1_555 A U 60 1_555 A A 52 1_555 -2.153 -0.768 3.168 -4.325 8.984 52.002 -1.429 2.145 3.161 10.141 4.881 52.884 19 AA_G31U60:A52C53_AA A 31 ? A 53 ? A 60 ? A 52 ? 1 A U 60 1_555 A A 52 1_555 A G 61 1_555 A C 51 1_555 -0.461 -2.212 3.578 -2.060 9.425 30.544 -5.718 0.465 2.813 17.354 3.793 31.996 20 AA_U60G61:C51A52_AA A 60 ? A 52 ? A 61 ? A 51 ? 1 A G 61 1_555 A C 51 1_555 A U 62 1_555 A G 50 1_555 0.253 -1.649 3.374 2.334 3.920 40.560 -2.802 -0.103 3.217 5.633 -3.353 40.805 21 AA_G61U62:G50C51_AA A 61 ? A 51 ? A 62 ? A 50 ? 1 A U 62 1_555 A G 50 1_555 A C 63 1_555 A G 49 1_555 -0.071 -2.259 2.962 4.184 8.705 19.855 -8.448 1.407 1.774 23.530 -11.309 22.058 22 AA_U62C63:G49G50_AA A 62 ? A 50 ? A 63 ? A 49 ? 1 A C 63 1_555 A G 49 1_555 A C 64 1_555 A G 48 1_555 -0.551 -1.632 3.169 2.725 4.841 30.367 -3.935 1.524 2.823 9.145 -5.147 30.860 23 AA_C63C64:G48G49_AA A 63 ? A 49 ? A 64 ? A 48 ? 1 A C 64 1_555 A G 48 1_555 A A 65 1_555 A U 47 1_555 0.701 -1.246 3.404 4.127 17.965 25.520 -5.493 -0.562 2.168 35.382 -8.127 31.391 24 AA_C64A65:U47G48_AA A 64 ? A 48 ? A 65 ? A 47 ? 1 A A 65 1_555 A U 47 1_555 A U 66 1_555 A U 46 1_555 -0.120 -0.362 2.957 -3.526 5.872 40.444 -1.092 -0.174 2.879 8.420 5.056 40.996 25 AA_A65U66:U46U47_AA A 65 ? A 47 ? A 66 ? A 46 ? 1 B GTP 1 1_555 B A 77 1_555 B G 2 1_555 B C 75 1_555 -1.406 -1.807 4.977 -4.980 5.722 47.649 -2.889 1.133 4.857 7.031 6.119 48.214 26 BB_GTP1G2:C75A77_BB B 1 ? B 77 ? B 2 ? B 75 ? 1 B G 2 1_555 B C 75 1_555 B A 3 1_555 B U 74 1_555 -0.420 -1.369 3.041 -5.840 10.922 28.167 -4.447 -0.204 2.395 21.193 11.333 30.719 27 BB_G2A3:U74C75_BB B 2 ? B 75 ? B 3 ? B 74 ? 1 B A 3 1_555 B U 74 1_555 B C 4 1_555 B G 73 1_555 -0.183 -1.352 2.987 0.154 6.049 32.254 -3.305 0.348 2.695 10.770 -0.275 32.802 28 BB_A3C4:G73U74_BB B 3 ? B 74 ? B 4 ? B 73 ? 1 B C 4 1_555 B G 73 1_555 B U 5 1_555 B A 72 1_555 0.056 -1.682 3.462 0.154 7.277 29.702 -4.633 -0.076 2.976 13.933 -0.294 30.562 29 BB_C4U5:A72G73_BB B 4 ? B 73 ? B 5 ? B 72 ? 1 B U 5 1_555 B A 72 1_555 B A 6 1_555 B U 71 1_555 0.023 -1.468 3.567 -2.759 9.732 33.941 -3.895 -0.458 3.034 16.228 4.601 35.374 30 BB_U5A6:U71A72_BB B 5 ? B 72 ? B 6 ? B 71 ? 1 B A 6 1_555 B U 71 1_555 B G 7 1_555 B A 41 1_555 -2.924 -0.890 3.243 8.299 -9.740 59.056 -0.429 3.300 2.947 -9.756 -8.313 60.304 31 BB_A6G7:A41U71_BB B 6 ? B 71 ? B 7 ? B 41 ? 1 B G 7 1_555 B A 41 1_555 B C 12 1_555 B G 42 1_555 -1.317 3.000 -1.574 151.222 85.686 -138.861 -1.359 -0.908 -1.590 -42.940 75.782 -177.826 32 BB_G7C12:G42A41_BB B 7 ? B 41 ? B 12 ? B 42 ? 1 B C 12 1_555 B G 42 1_555 B C 11 1_555 B G 43 1_555 0.655 1.889 -3.364 0.501 -1.988 -35.986 -3.339 0.987 -3.267 3.215 0.809 -36.043 33 BB_C12C11:G43G42_BB B 12 ? B 42 ? B 11 ? B 43 ? 1 B C 11 1_555 B G 43 1_555 B A 8 1_555 B U 44 1_555 2.994 2.448 0.869 -75.703 152.587 -12.096 -1.270 1.481 -0.765 -80.166 -39.772 -170.388 34 BB_C11A8:U44G43_BB B 11 ? B 43 ? B 8 ? B 44 ? 1 B A 8 1_555 B U 44 1_555 B A 37 1_555 B U 18 1_555 5.424 2.335 -0.823 170.282 -20.458 -139.730 -1.203 2.418 -2.527 10.260 85.398 -177.079 35 BB_A8A37:U18U44_BB B 8 ? B 44 ? B 37 ? B 18 ? 1 B A 37 1_555 B U 18 1_555 B C 36 1_555 B G 20 1_555 -2.468 -0.360 -3.492 -15.044 2.986 -49.404 0.652 -1.635 -4.009 -3.477 -17.518 -51.587 36 BB_A37C36:G20U18_BB B 37 ? B 18 ? B 36 ? B 20 ? 1 B C 36 1_555 B G 20 1_555 B G 35 1_555 B C 21 1_555 0.356 1.855 -3.390 0.019 -0.961 -41.587 -2.717 0.499 -3.348 1.353 0.026 -41.598 37 BB_C36G35:C21G20_BB B 36 ? B 20 ? B 35 ? B 21 ? 1 B G 35 1_555 B C 21 1_555 B C 34 1_555 B G 22 1_555 -0.597 2.307 -3.350 -0.919 -5.192 -23.312 -7.183 -1.158 -2.798 12.644 -2.237 -23.893 38 BB_G35C34:G22C21_BB B 35 ? B 21 ? B 34 ? B 22 ? 1 B C 34 1_555 B G 22 1_555 B A 33 1_555 B U 23 1_555 -0.338 1.650 -3.274 -2.563 -2.852 -27.802 -4.063 -0.104 -3.110 5.900 -5.301 -28.060 39 BB_C34A33:U23G22_BB B 34 ? B 22 ? B 33 ? B 23 ? 1 B A 33 1_555 B U 23 1_555 B C 32 1_555 B G 24 1_555 0.185 1.654 -3.008 -2.465 -4.414 -29.075 -4.075 0.825 -2.708 8.710 -4.864 -29.502 40 BB_A33C32:G24U23_BB B 33 ? B 23 ? B 32 ? B 24 ? 1 B G 13 1_555 B G 69 1_555 B A 15 1_555 B U 68 1_555 1.847 -2.788 -0.845 110.004 123.225 -37.549 1.489 0.855 0.530 -65.352 58.340 -165.974 41 BB_G13A15:U68G69_BB B 13 ? B 69 ? B 15 ? B 68 ? 1 B A 15 1_555 B U 68 1_555 B A 16 1_555 B A 67 1_555 0.068 -0.971 3.198 7.578 -4.081 33.926 -1.001 1.028 3.229 -6.858 -12.734 34.970 42 BB_A15A16:A67U68_BB B 15 ? B 68 ? B 16 ? B 67 ? 1 B A 28 1_555 B A 57 1_555 B C 54 1_555 B G 30 1_555 4.094 0.162 -3.507 -1.156 -10.092 133.272 0.016 -2.220 -3.529 -5.494 0.630 133.466 43 BB_A28C54:G30A57_BB B 28 ? B 57 ? B 54 ? B 30 ? 1 B C 54 1_555 B G 30 1_555 B A 58 1_555 B U 27 1_555 -2.048 5.027 -5.016 87.243 -131.864 168.477 2.297 0.881 -5.516 -65.977 -43.651 177.816 44 BB_C54A58:U27G30_BB B 54 ? B 30 ? B 58 ? B 27 ? 1 B G 31 1_555 B C 53 1_555 B U 60 1_555 B A 52 1_555 -2.577 -0.688 3.269 -4.762 7.619 54.055 -1.214 2.511 3.350 8.318 5.199 54.741 45 BB_G31U60:A52C53_BB B 31 ? B 53 ? B 60 ? B 52 ? 1 B U 60 1_555 B A 52 1_555 B G 61 1_555 B C 51 1_555 -0.481 -1.936 3.599 -3.341 4.339 26.730 -5.256 0.133 3.284 9.262 7.131 27.276 46 BB_U60G61:C51A52_BB B 60 ? B 52 ? B 61 ? B 51 ? 1 B G 61 1_555 B C 51 1_555 B U 62 1_555 B G 50 1_555 0.104 -1.511 3.111 0.403 4.639 39.199 -2.744 -0.110 2.921 6.885 -0.598 39.464 47 BB_G61U62:G50C51_BB B 61 ? B 51 ? B 62 ? B 50 ? 1 B U 62 1_555 B G 50 1_555 B C 63 1_555 B G 49 1_555 0.475 -2.273 3.286 4.403 3.483 23.191 -6.601 0.246 2.956 8.505 -10.752 23.852 48 BB_U62C63:G49G50_BB B 62 ? B 50 ? B 63 ? B 49 ? 1 B C 63 1_555 B G 49 1_555 B C 64 1_555 B G 48 1_555 -0.745 -1.995 3.302 -0.057 9.717 27.778 -5.828 1.457 2.478 19.499 0.113 29.397 49 BB_C63C64:G48G49_BB B 63 ? B 49 ? B 64 ? B 48 ? 1 B C 64 1_555 B G 48 1_555 B A 65 1_555 B U 47 1_555 0.409 -1.701 2.997 -4.271 3.572 26.241 -4.473 -1.844 2.648 7.757 9.275 26.815 50 BB_C64A65:U47G48_BB B 64 ? B 48 ? B 65 ? B 47 ? 1 B A 65 1_555 B U 47 1_555 B U 66 1_555 B U 46 1_555 0.652 -1.075 2.956 2.188 7.207 42.478 -2.089 -0.697 2.775 9.854 -2.992 43.110 51 BB_A65U66:U46U47_BB B 65 ? B 47 ? B 66 ? B 46 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 'R35 GM152029' _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4FE5 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 12CJ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.006144 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003639 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027834 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011948 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P SR # loop_ #