HEADER VIRAL PROTEIN 06-APR-26 12HG TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE NSP8 FROM SARS-COV2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 8; COMPND 3 CHAIN: A, B, C, D, E, F, G, H; COMPND 4 SYNONYM: NSP8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: GOLD KEYWDS NSP8, SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 (SARS-COV2) KEYWDS 2 STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL BIOLOGY OF INFECTIOUS KEYWDS 3 DISEASES, CSBID, BIOPREPAREDNESS RESEARCH VIRTUAL ENVIRONMENT KEYWDS 4 (BRAVE), VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,C.TESAR,M.ENDRES,A.JOACHIMIAK,CENTER FOR STRUCTURAL BIOLOGY OF AUTHOR 2 INFECTIOUS DISEASES (CSBID) REVDAT 1 26-AUG-26 12HG 0 JRNL AUTH Y.KIM,C.TESAR,M.ENDRES,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL BIOLOGY OF INFECTIOUS DISEASES (CSBID) JRNL TITL CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE NSP8 FROM JRNL TITL 2 SARS-COV2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 30504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.660 REMARK 3 FREE R VALUE TEST SET COUNT : 1423 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.5900 - 5.0600 0.99 2992 148 0.1987 0.2143 REMARK 3 2 5.0600 - 4.0200 1.00 2972 124 0.1993 0.2347 REMARK 3 3 4.0200 - 3.5100 0.99 2895 135 0.2083 0.2807 REMARK 3 4 3.5100 - 3.1900 1.00 2949 119 0.2490 0.2946 REMARK 3 5 3.1900 - 2.9600 1.00 2893 145 0.2770 0.2766 REMARK 3 6 2.9600 - 2.7900 0.99 2903 137 0.2638 0.3122 REMARK 3 7 2.7900 - 2.6500 1.00 2897 155 0.2603 0.3055 REMARK 3 8 2.6500 - 2.5300 1.00 2852 142 0.2635 0.2972 REMARK 3 9 2.5300 - 2.4300 1.00 2922 138 0.2721 0.2970 REMARK 3 10 2.4300 - 2.3500 0.99 2806 180 0.3095 0.3493 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.351 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.794 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 85.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4419 REMARK 3 ANGLE : 0.460 5893 REMARK 3 CHIRALITY : 0.028 649 REMARK 3 PLANARITY : 0.003 768 REMARK 3 DIHEDRAL : 14.348 1677 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 10 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.5678 -2.3610 16.0309 REMARK 3 T TENSOR REMARK 3 T11: 0.8476 T22: 0.8185 REMARK 3 T33: 1.0701 T12: 0.2566 REMARK 3 T13: -0.0559 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 3.0713 L22: 2.9567 REMARK 3 L33: -0.6998 L12: -1.6765 REMARK 3 L13: -1.5197 L23: 0.1923 REMARK 3 S TENSOR REMARK 3 S11: -0.0107 S12: 0.4586 S13: 1.5726 REMARK 3 S21: 0.4143 S22: 0.0054 S23: -1.5152 REMARK 3 S31: -0.3687 S32: -0.3541 S33: 0.0676 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6423 1.5145 22.5434 REMARK 3 T TENSOR REMARK 3 T11: 1.6065 T22: 1.0570 REMARK 3 T33: 0.9856 T12: 0.6707 REMARK 3 T13: -0.3121 T23: -0.1894 REMARK 3 L TENSOR REMARK 3 L11: 9.5934 L22: 2.5875 REMARK 3 L33: 5.0252 L12: 4.2754 REMARK 3 L13: 0.2141 L23: 0.1056 REMARK 3 S TENSOR REMARK 3 S11: 1.9569 S12: 0.8098 S13: -1.1935 REMARK 3 S21: -0.8405 S22: -0.6128 S23: 0.6744 REMARK 3 S31: 2.6376 S32: 0.3853 S33: -0.3452 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0701 6.3950 20.8464 REMARK 3 T TENSOR REMARK 3 T11: 1.0485 T22: 0.6092 REMARK 3 T33: 1.1053 T12: 0.1421 REMARK 3 T13: -0.1104 T23: 0.1246 REMARK 3 L TENSOR REMARK 3 L11: 5.1379 L22: 4.8280 REMARK 3 L33: 4.6677 L12: 0.3543 REMARK 3 L13: 0.9141 L23: -0.4497 REMARK 3 S TENSOR REMARK 3 S11: 0.6249 S12: -0.3046 S13: -1.4404 REMARK 3 S21: 0.6260 S22: -0.1602 S23: 0.6100 REMARK 3 S31: 1.7299 S32: 0.3951 S33: -0.6462 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.3230 2.0902 14.6198 REMARK 3 T TENSOR REMARK 3 T11: 0.9427 T22: 1.0499 REMARK 3 T33: 0.6810 T12: 0.3745 REMARK 3 T13: -0.1379 T23: -0.1714 REMARK 3 L TENSOR REMARK 3 L11: 9.2904 L22: 1.9679 REMARK 3 L33: -0.6741 L12: -3.2583 REMARK 3 L13: 1.3385 L23: -1.3715 REMARK 3 S TENSOR REMARK 3 S11: 1.3286 S12: 2.1616 S13: -0.5234 REMARK 3 S21: -0.8003 S22: -1.0943 S23: 0.3148 REMARK 3 S31: 0.4718 S32: 0.4665 S33: -0.2581 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.8585 19.3743 40.0400 REMARK 3 T TENSOR REMARK 3 T11: 0.8236 T22: 0.5111 REMARK 3 T33: 0.4333 T12: -0.0281 REMARK 3 T13: 0.0332 T23: 0.0793 REMARK 3 L TENSOR REMARK 3 L11: 3.2283 L22: 3.0239 REMARK 3 L33: 5.3381 L12: -0.0540 REMARK 3 L13: 0.6146 L23: -0.2220 REMARK 3 S TENSOR REMARK 3 S11: 0.1612 S12: -0.9901 S13: -0.3276 REMARK 3 S21: 0.8462 S22: 0.0700 S23: 0.3561 REMARK 3 S31: -0.8025 S32: 0.4253 S33: -0.2276 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 32 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.8544 10.2723 29.6458 REMARK 3 T TENSOR REMARK 3 T11: 0.7388 T22: 0.5419 REMARK 3 T33: 0.4934 T12: 0.2470 REMARK 3 T13: -0.0749 T23: -0.0672 REMARK 3 L TENSOR REMARK 3 L11: 4.9755 L22: 6.0082 REMARK 3 L33: 0.8721 L12: -4.1912 REMARK 3 L13: -2.1272 L23: 0.9166 REMARK 3 S TENSOR REMARK 3 S11: 0.9921 S12: 0.6951 S13: -0.4713 REMARK 3 S21: -1.0756 S22: -0.8522 S23: 0.2816 REMARK 3 S31: -0.0137 S32: -0.0638 S33: -0.1128 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 4 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.8662 8.9726 39.4431 REMARK 3 T TENSOR REMARK 3 T11: 1.4159 T22: 0.5398 REMARK 3 T33: 0.5867 T12: -0.0175 REMARK 3 T13: -0.1316 T23: 0.0926 REMARK 3 L TENSOR REMARK 3 L11: 4.0312 L22: 3.6822 REMARK 3 L33: 5.5968 L12: -0.2068 REMARK 3 L13: 0.2433 L23: 2.4268 REMARK 3 S TENSOR REMARK 3 S11: 0.6731 S12: 0.8668 S13: -0.0436 REMARK 3 S21: -0.8552 S22: 0.1893 S23: -0.1336 REMARK 3 S31: 1.8560 S32: 0.9257 S33: -0.5956 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 32 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.8837 17.4719 49.2793 REMARK 3 T TENSOR REMARK 3 T11: 0.6464 T22: 0.4844 REMARK 3 T33: 0.3827 T12: -0.0804 REMARK 3 T13: -0.0309 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 2.0209 L22: 6.2462 REMARK 3 L33: 2.7719 L12: 1.1796 REMARK 3 L13: 1.4038 L23: 1.7226 REMARK 3 S TENSOR REMARK 3 S11: 0.0209 S12: 0.0036 S13: 0.2067 REMARK 3 S21: -0.1567 S22: -0.2465 S23: 0.5537 REMARK 3 S31: 0.2745 S32: -0.3358 S33: 0.1485 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 2 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6841 -13.4222 61.6975 REMARK 3 T TENSOR REMARK 3 T11: 1.3510 T22: 1.1773 REMARK 3 T33: 1.2391 T12: -0.2307 REMARK 3 T13: -0.0316 T23: 0.6768 REMARK 3 L TENSOR REMARK 3 L11: 2.6703 L22: 3.0223 REMARK 3 L33: 0.8662 L12: 0.9718 REMARK 3 L13: 0.5332 L23: -0.9613 REMARK 3 S TENSOR REMARK 3 S11: 1.1478 S12: -2.8497 S13: -3.0504 REMARK 3 S21: -1.0438 S22: -0.3835 S23: -0.5222 REMARK 3 S31: 2.6909 S32: 0.0374 S33: 0.3649 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 10 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.5793 -11.5021 59.2377 REMARK 3 T TENSOR REMARK 3 T11: 1.2870 T22: 0.7843 REMARK 3 T33: 0.6793 T12: -0.0524 REMARK 3 T13: -0.0386 T23: 0.2575 REMARK 3 L TENSOR REMARK 3 L11: -1.0659 L22: 0.7665 REMARK 3 L33: 1.7725 L12: -0.3251 REMARK 3 L13: -2.2332 L23: 0.1069 REMARK 3 S TENSOR REMARK 3 S11: -0.0846 S12: -0.4435 S13: -0.1578 REMARK 3 S21: -1.7578 S22: 0.1288 S23: 0.3352 REMARK 3 S31: 1.8986 S32: -0.0998 S33: 0.1207 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'E' AND (RESID -1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1530 -15.1167 16.7676 REMARK 3 T TENSOR REMARK 3 T11: 1.1864 T22: 1.1773 REMARK 3 T33: 1.1182 T12: -0.0731 REMARK 3 T13: -0.1998 T23: 0.5489 REMARK 3 L TENSOR REMARK 3 L11: 7.8194 L22: 4.1186 REMARK 3 L33: 3.2948 L12: -0.0104 REMARK 3 L13: 0.1255 L23: 3.6637 REMARK 3 S TENSOR REMARK 3 S11: -0.9694 S12: 0.4080 S13: 1.8436 REMARK 3 S21: 1.0351 S22: -0.9382 S23: -1.0869 REMARK 3 S31: -1.7572 S32: 1.1062 S33: -0.2733 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 10 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0745 -17.0740 19.3715 REMARK 3 T TENSOR REMARK 3 T11: 0.6925 T22: 0.9089 REMARK 3 T33: 0.7419 T12: -0.1753 REMARK 3 T13: -0.1461 T23: 0.3268 REMARK 3 L TENSOR REMARK 3 L11: -1.0613 L22: 2.6954 REMARK 3 L33: 5.5687 L12: -1.0564 REMARK 3 L13: 0.0939 L23: -2.4572 REMARK 3 S TENSOR REMARK 3 S11: -0.3438 S12: 0.2702 S13: 0.3360 REMARK 3 S21: 0.8922 S22: -0.4591 S23: -0.3766 REMARK 3 S31: -0.9922 S32: 0.6712 S33: 1.0125 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 4 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3449 -33.1227 13.7034 REMARK 3 T TENSOR REMARK 3 T11: 0.4764 T22: 0.6008 REMARK 3 T33: 0.8902 T12: 0.1105 REMARK 3 T13: 0.0076 T23: 0.0250 REMARK 3 L TENSOR REMARK 3 L11: 4.3309 L22: 2.1233 REMARK 3 L33: 3.9501 L12: -0.0510 REMARK 3 L13: 1.0745 L23: 0.2816 REMARK 3 S TENSOR REMARK 3 S11: -0.2987 S12: 0.1372 S13: -0.6495 REMARK 3 S21: -0.1930 S22: 0.2021 S23: 0.7861 REMARK 3 S31: 0.3794 S32: -0.7024 S33: -0.1317 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 32 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2763 -23.9860 12.1099 REMARK 3 T TENSOR REMARK 3 T11: 0.4334 T22: 0.5407 REMARK 3 T33: 0.6039 T12: -0.0303 REMARK 3 T13: -0.0859 T23: 0.2225 REMARK 3 L TENSOR REMARK 3 L11: 1.0960 L22: 6.7408 REMARK 3 L33: 4.3213 L12: 2.2176 REMARK 3 L13: -2.6558 L23: -3.7375 REMARK 3 S TENSOR REMARK 3 S11: 0.0040 S12: -0.2067 S13: -0.4184 REMARK 3 S21: 0.3685 S22: -0.8376 S23: -1.0950 REMARK 3 S31: -0.1761 S32: 0.7240 S33: 0.7617 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 4 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0398 -32.8281 3.2436 REMARK 3 T TENSOR REMARK 3 T11: 1.2818 T22: 1.1505 REMARK 3 T33: 1.2373 T12: -0.1249 REMARK 3 T13: 0.2282 T23: -0.0609 REMARK 3 L TENSOR REMARK 3 L11: 4.7412 L22: 2.1697 REMARK 3 L33: 5.1489 L12: -0.2346 REMARK 3 L13: -4.7595 L23: 1.0859 REMARK 3 S TENSOR REMARK 3 S11: -0.4989 S12: 0.1567 S13: 0.2656 REMARK 3 S21: -0.9291 S22: 1.7572 S23: -0.9518 REMARK 3 S31: 1.3001 S32: -0.0089 S33: 0.2520 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 10 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4729 -27.2298 13.9735 REMARK 3 T TENSOR REMARK 3 T11: 0.4632 T22: 0.4702 REMARK 3 T33: 0.7047 T12: 0.0223 REMARK 3 T13: -0.1321 T23: -0.0328 REMARK 3 L TENSOR REMARK 3 L11: 4.9280 L22: 6.7955 REMARK 3 L33: 3.6758 L12: 0.8490 REMARK 3 L13: 2.7977 L23: 2.3832 REMARK 3 S TENSOR REMARK 3 S11: 0.0621 S12: 0.0341 S13: 0.7397 REMARK 3 S21: 0.9566 S22: -0.1187 S23: -0.7026 REMARK 3 S31: 0.0796 S32: 0.2873 S33: -0.2553 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 2 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6896 -0.4916 22.2979 REMARK 3 T TENSOR REMARK 3 T11: 1.6399 T22: 1.2051 REMARK 3 T33: 1.3179 T12: 0.6415 REMARK 3 T13: 0.0319 T23: -0.1440 REMARK 3 L TENSOR REMARK 3 L11: 6.4703 L22: 3.8490 REMARK 3 L33: 0.2400 L12: -4.9997 REMARK 3 L13: -0.6067 L23: 0.5034 REMARK 3 S TENSOR REMARK 3 S11: -0.3684 S12: -0.9483 S13: 3.0704 REMARK 3 S21: 1.0204 S22: 0.9320 S23: -1.7369 REMARK 3 S31: -1.7989 S32: -1.6130 S33: -0.1247 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 12HG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-APR-26. REMARK 100 THE DEPOSITION ID IS D_1000306719. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30760 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.17600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.68700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRIC ACID, PH 4.0, 2.5 M NACL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.13600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: H REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 80.87900 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 77.01897 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 -28.13600 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 80.95102 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 3.86003 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -80.95102 REMARK 350 APPLY THE FOLLOWING TO CHAINS: G REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 28.13600 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 SER A 76 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 ALA B 1 REMARK 465 ILE B 2 REMARK 465 ALA B 3 REMARK 465 MET B 70 REMARK 465 TYR B 71 REMARK 465 LYS B 72 REMARK 465 GLN B 73 REMARK 465 ALA B 74 REMARK 465 ARG B 75 REMARK 465 SER B 76 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 ALA C 1 REMARK 465 ILE C 2 REMARK 465 ALA C 3 REMARK 465 GLN C 69 REMARK 465 MET C 70 REMARK 465 TYR C 71 REMARK 465 LYS C 72 REMARK 465 GLN C 73 REMARK 465 ALA C 74 REMARK 465 ARG C 75 REMARK 465 SER C 76 REMARK 465 SER D -2 REMARK 465 ASN D -1 REMARK 465 ALA D 0 REMARK 465 ALA D 1 REMARK 465 SER E -2 REMARK 465 SER F -2 REMARK 465 ASN F -1 REMARK 465 ALA F 0 REMARK 465 ALA F 1 REMARK 465 ILE F 2 REMARK 465 ALA F 3 REMARK 465 MET F 70 REMARK 465 TYR F 71 REMARK 465 LYS F 72 REMARK 465 GLN F 73 REMARK 465 ALA F 74 REMARK 465 ARG F 75 REMARK 465 SER F 76 REMARK 465 SER G -2 REMARK 465 ASN G -1 REMARK 465 ALA G 0 REMARK 465 ALA G 1 REMARK 465 ILE G 2 REMARK 465 ALA G 3 REMARK 465 GLN G 69 REMARK 465 MET G 70 REMARK 465 TYR G 71 REMARK 465 LYS G 72 REMARK 465 GLN G 73 REMARK 465 ALA G 74 REMARK 465 ARG G 75 REMARK 465 SER G 76 REMARK 465 SER H -2 REMARK 465 ASN H -1 REMARK 465 ALA H 0 REMARK 465 ALA H 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN E -1 CB CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE C 6 31.29 -96.61 REMARK 500 SER D 31 157.77 -49.66 REMARK 500 ASP H 30 -168.94 -78.50 REMARK 500 REMARK 500 REMARK: NULL DBREF 12HG A 1 76 UNP P0DTC1 R1A_SARS2 3943 4018 DBREF 12HG B 1 76 UNP P0DTC1 R1A_SARS2 3943 4018 DBREF 12HG C 1 76 UNP P0DTC1 R1A_SARS2 3943 4018 DBREF 12HG D 1 76 UNP P0DTC1 R1A_SARS2 3943 4018 DBREF 12HG E 1 76 UNP P0DTC1 R1A_SARS2 3943 4018 DBREF 12HG F 1 76 UNP P0DTC1 R1A_SARS2 3943 4018 DBREF 12HG G 1 76 UNP P0DTC1 R1A_SARS2 3943 4018 DBREF 12HG H 1 76 UNP P0DTC1 R1A_SARS2 3943 4018 SEQADV 12HG SER A -2 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ASN A -1 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ALA A 0 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG SER B -2 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ASN B -1 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ALA B 0 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG SER C -2 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ASN C -1 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ALA C 0 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG SER D -2 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ASN D -1 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ALA D 0 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG SER E -2 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ASN E -1 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ALA E 0 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG SER F -2 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ASN F -1 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ALA F 0 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG SER G -2 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ASN G -1 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ALA G 0 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG SER H -2 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ASN H -1 UNP P0DTC1 EXPRESSION TAG SEQADV 12HG ALA H 0 UNP P0DTC1 EXPRESSION TAG SEQRES 1 A 79 SER ASN ALA ALA ILE ALA SER GLU PHE SER SER LEU PRO SEQRES 2 A 79 SER TYR ALA ALA PHE ALA THR ALA GLN GLU ALA TYR GLU SEQRES 3 A 79 GLN ALA VAL ALA ASN GLY ASP SER GLU VAL VAL LEU LYS SEQRES 4 A 79 LYS LEU LYS LYS SER LEU ASN VAL ALA LYS SER GLU PHE SEQRES 5 A 79 ASP ARG ASP ALA ALA MET GLN ARG LYS LEU GLU LYS MET SEQRES 6 A 79 ALA ASP GLN ALA MET THR GLN MET TYR LYS GLN ALA ARG SEQRES 7 A 79 SER SEQRES 1 B 79 SER ASN ALA ALA ILE ALA SER GLU PHE SER SER LEU PRO SEQRES 2 B 79 SER TYR ALA ALA PHE ALA THR ALA GLN GLU ALA TYR GLU SEQRES 3 B 79 GLN ALA VAL ALA ASN GLY ASP SER GLU VAL VAL LEU LYS SEQRES 4 B 79 LYS LEU LYS LYS SER LEU ASN VAL ALA LYS SER GLU PHE SEQRES 5 B 79 ASP ARG ASP ALA ALA MET GLN ARG LYS LEU GLU LYS MET SEQRES 6 B 79 ALA ASP GLN ALA MET THR GLN MET TYR LYS GLN ALA ARG SEQRES 7 B 79 SER SEQRES 1 C 79 SER ASN ALA ALA ILE ALA SER GLU PHE SER SER LEU PRO SEQRES 2 C 79 SER TYR ALA ALA PHE ALA THR ALA GLN GLU ALA TYR GLU SEQRES 3 C 79 GLN ALA VAL ALA ASN GLY ASP SER GLU VAL VAL LEU LYS SEQRES 4 C 79 LYS LEU LYS LYS SER LEU ASN VAL ALA LYS SER GLU PHE SEQRES 5 C 79 ASP ARG ASP ALA ALA MET GLN ARG LYS LEU GLU LYS MET SEQRES 6 C 79 ALA ASP GLN ALA MET THR GLN MET TYR LYS GLN ALA ARG SEQRES 7 C 79 SER SEQRES 1 D 79 SER ASN ALA ALA ILE ALA SER GLU PHE SER SER LEU PRO SEQRES 2 D 79 SER TYR ALA ALA PHE ALA THR ALA GLN GLU ALA TYR GLU SEQRES 3 D 79 GLN ALA VAL ALA ASN GLY ASP SER GLU VAL VAL LEU LYS SEQRES 4 D 79 LYS LEU LYS LYS SER LEU ASN VAL ALA LYS SER GLU PHE SEQRES 5 D 79 ASP ARG ASP ALA ALA MET GLN ARG LYS LEU GLU LYS MET SEQRES 6 D 79 ALA ASP GLN ALA MET THR GLN MET TYR LYS GLN ALA ARG SEQRES 7 D 79 SER SEQRES 1 E 79 SER ASN ALA ALA ILE ALA SER GLU PHE SER SER LEU PRO SEQRES 2 E 79 SER TYR ALA ALA PHE ALA THR ALA GLN GLU ALA TYR GLU SEQRES 3 E 79 GLN ALA VAL ALA ASN GLY ASP SER GLU VAL VAL LEU LYS SEQRES 4 E 79 LYS LEU LYS LYS SER LEU ASN VAL ALA LYS SER GLU PHE SEQRES 5 E 79 ASP ARG ASP ALA ALA MET GLN ARG LYS LEU GLU LYS MET SEQRES 6 E 79 ALA ASP GLN ALA MET THR GLN MET TYR LYS GLN ALA ARG SEQRES 7 E 79 SER SEQRES 1 F 79 SER ASN ALA ALA ILE ALA SER GLU PHE SER SER LEU PRO SEQRES 2 F 79 SER TYR ALA ALA PHE ALA THR ALA GLN GLU ALA TYR GLU SEQRES 3 F 79 GLN ALA VAL ALA ASN GLY ASP SER GLU VAL VAL LEU LYS SEQRES 4 F 79 LYS LEU LYS LYS SER LEU ASN VAL ALA LYS SER GLU PHE SEQRES 5 F 79 ASP ARG ASP ALA ALA MET GLN ARG LYS LEU GLU LYS MET SEQRES 6 F 79 ALA ASP GLN ALA MET THR GLN MET TYR LYS GLN ALA ARG SEQRES 7 F 79 SER SEQRES 1 G 79 SER ASN ALA ALA ILE ALA SER GLU PHE SER SER LEU PRO SEQRES 2 G 79 SER TYR ALA ALA PHE ALA THR ALA GLN GLU ALA TYR GLU SEQRES 3 G 79 GLN ALA VAL ALA ASN GLY ASP SER GLU VAL VAL LEU LYS SEQRES 4 G 79 LYS LEU LYS LYS SER LEU ASN VAL ALA LYS SER GLU PHE SEQRES 5 G 79 ASP ARG ASP ALA ALA MET GLN ARG LYS LEU GLU LYS MET SEQRES 6 G 79 ALA ASP GLN ALA MET THR GLN MET TYR LYS GLN ALA ARG SEQRES 7 G 79 SER SEQRES 1 H 79 SER ASN ALA ALA ILE ALA SER GLU PHE SER SER LEU PRO SEQRES 2 H 79 SER TYR ALA ALA PHE ALA THR ALA GLN GLU ALA TYR GLU SEQRES 3 H 79 GLN ALA VAL ALA ASN GLY ASP SER GLU VAL VAL LEU LYS SEQRES 4 H 79 LYS LEU LYS LYS SER LEU ASN VAL ALA LYS SER GLU PHE SEQRES 5 H 79 ASP ARG ASP ALA ALA MET GLN ARG LYS LEU GLU LYS MET SEQRES 6 H 79 ALA ASP GLN ALA MET THR GLN MET TYR LYS GLN ALA ARG SEQRES 7 H 79 SER HET FMT B 101 3 HET FMT C 101 3 HET GOL C 102 6 HET FMT D 101 3 HET FMT F 101 3 HET FMT F 102 3 HET FMT G 101 3 HET FMT H 101 3 HETNAM FMT FORMIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 9 FMT 7(C H2 O2) FORMUL 11 GOL C3 H8 O3 FORMUL 17 HOH *33(H2 O) HELIX 1 AA1 ALA A 0 SER A 7 1 8 HELIX 2 AA2 LEU A 9 ASN A 28 1 20 HELIX 3 AA3 SER A 31 ARG A 75 1 45 HELIX 4 AA4 GLU B 5 SER B 8 5 4 HELIX 5 AA5 LEU B 9 ASN B 28 1 20 HELIX 6 AA6 SER B 31 MET B 67 1 37 HELIX 7 AA7 LEU C 9 ASN C 28 1 20 HELIX 8 AA8 SER C 31 ALA C 66 1 36 HELIX 9 AA9 SER D 11 ASN D 28 1 18 HELIX 10 AB1 SER D 31 SER D 76 1 46 HELIX 11 AB2 ALA E 0 SER E 7 1 8 HELIX 12 AB3 LEU E 9 ASN E 28 1 20 HELIX 13 AB4 SER E 31 SER E 76 1 46 HELIX 14 AB5 GLU F 5 SER F 8 5 4 HELIX 15 AB6 LEU F 9 GLY F 29 1 21 HELIX 16 AB7 SER F 31 GLN F 69 1 39 HELIX 17 AB8 LEU G 9 GLY G 29 1 21 HELIX 18 AB9 SER G 31 ALA G 66 1 36 HELIX 19 AC1 SER H 11 ASN H 28 1 18 HELIX 20 AC2 SER H 31 ALA H 74 1 44 CRYST1 80.879 56.272 81.043 90.00 92.73 90.00 P 1 21 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012364 0.000000 0.000590 0.00000 SCALE2 0.000000 0.017771 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012353 0.00000 CONECT 4365 4366 4367 CONECT 4366 4365 CONECT 4367 4365 CONECT 4368 4369 4370 CONECT 4369 4368 CONECT 4370 4368 CONECT 4371 4372 4373 CONECT 4372 4371 CONECT 4373 4371 4374 4375 CONECT 4374 4373 CONECT 4375 4373 4376 CONECT 4376 4375 CONECT 4377 4378 4379 CONECT 4378 4377 CONECT 4379 4377 CONECT 4380 4381 4382 CONECT 4381 4380 CONECT 4382 4380 CONECT 4383 4384 4385 CONECT 4384 4383 CONECT 4385 4383 CONECT 4386 4387 4388 CONECT 4387 4386 CONECT 4388 4386 CONECT 4389 4390 4391 CONECT 4390 4389 CONECT 4391 4389 MASTER 576 0 8 20 0 0 0 6 4416 8 27 56 END