HEADER HYDROLASE 13-APR-26 12NV TITLE CRYSTAL STRUCTURE OF A GH26 ENZYME (EIGH26A) IN COMPLEX WITH GLUCOSE- TITLE 2 BETA-1,4-GLUCOSE-BETA-1,4-MANNOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSIDE HYDROLASE FAMILY 26; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METAGENOME; SOURCE 3 ORGANISM_TAXID: 256318; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HYDROLASE, METAGENOME, MANATEE, GUT MICROBIOTA, HETEROMANNAN EXPDTA X-RAY DIFFRACTION AUTHOR C.H.M.OLIVEIRA,R.Y.MIYAMOTO,L.G.MORAO,M.P.MARTINS,M.T.MURAKAMI REVDAT 1 09-SEP-26 12NV 0 JRNL AUTH G.F.PERSINOTI,M.P.MARTINS,C.B.C.SILVA,R.S.A.STREIT, JRNL AUTH 2 D.A.A.PAIXAO,G.H.MARTINS,P.M.R.HIGASI,G.M.BRAATZ, JRNL AUTH 3 M.K.P.SILVA,L.G.MORAO,J.MARTINS-JUNIOR,F.STOFFEL,H.CIOL, JRNL AUTH 4 G.D.NOSKE,R.Y.MIYAMOTO,G.M.OLIVEIRA,D.B.MARTIM, JRNL AUTH 5 C.H.M.OLIVEIRA,O.A.C.ALMEIDA,E.A.ARAUJO,M.O.ANDRADE, JRNL AUTH 6 C.A.SANTOS,J.A.DIOGO,L.D.WOLF,J.V.ZANOTTO,A.R.SOUZA, JRNL AUTH 7 F.A.C.GONCALVES,D.M.D.MELLO,M.A.B.MORAIS,J.PORTO,V.LOMBARD, JRNL AUTH 8 P.O.GIUSEPPE,N.TERRAPON,L.N.LEMOS,B.HENRISSAT,V.L.CARVALHO, JRNL AUTH 9 V.M.F.SILVA,M.T.MURAKAMI JRNL TITL CRYSTAL STRUCTURE OF A GH26 ENZYME (EIGH26A) IN COMPLEX WITH JRNL TITL 2 GLUCOSE-BETA-1,4-GLUCOSE-BETA-1,4-MANNOSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 108182 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.170 REMARK 3 FREE R VALUE TEST SET COUNT : 5595 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.2100 - 3.6500 0.99 3671 177 0.1327 0.1317 REMARK 3 2 3.6500 - 2.9000 0.99 3541 218 0.1451 0.1573 REMARK 3 3 2.9000 - 2.5300 0.99 3557 188 0.1499 0.1752 REMARK 3 4 2.5300 - 2.3000 0.99 3539 202 0.1530 0.1701 REMARK 3 5 2.3000 - 2.1400 0.99 3489 209 0.1330 0.1442 REMARK 3 6 2.1400 - 2.0100 0.99 3515 210 0.1344 0.1498 REMARK 3 7 2.0100 - 1.9100 0.98 3566 151 0.1352 0.1519 REMARK 3 8 1.9100 - 1.8300 0.98 3475 225 0.1350 0.1577 REMARK 3 9 1.8300 - 1.7600 0.98 3478 187 0.1344 0.1494 REMARK 3 10 1.7600 - 1.7000 0.98 3467 187 0.1353 0.1646 REMARK 3 11 1.7000 - 1.6400 0.98 3516 163 0.1394 0.1580 REMARK 3 12 1.6400 - 1.6000 0.97 3474 177 0.1432 0.1813 REMARK 3 13 1.6000 - 1.5500 0.97 3443 174 0.1497 0.1697 REMARK 3 14 1.5500 - 1.5200 0.97 3445 175 0.1546 0.1904 REMARK 3 15 1.5200 - 1.4800 0.97 3448 191 0.1788 0.1728 REMARK 3 16 1.4800 - 1.4500 0.97 3450 180 0.1827 0.2032 REMARK 3 17 1.4500 - 1.4200 0.96 3402 161 0.1897 0.2187 REMARK 3 18 1.4200 - 1.3900 0.96 3456 192 0.1964 0.2139 REMARK 3 19 1.3900 - 1.3700 0.96 3398 187 0.2020 0.2200 REMARK 3 20 1.3700 - 1.3500 0.96 3350 206 0.2117 0.2282 REMARK 3 21 1.3500 - 1.3200 0.96 3404 212 0.2275 0.2323 REMARK 3 22 1.3200 - 1.3000 0.95 3336 183 0.2366 0.2395 REMARK 3 23 1.3000 - 1.2800 0.95 3384 203 0.2525 0.2268 REMARK 3 24 1.2800 - 1.2700 0.95 3327 190 0.2717 0.2903 REMARK 3 25 1.2700 - 1.2500 0.95 3393 199 0.2874 0.2851 REMARK 3 26 1.2500 - 1.2300 0.94 3263 180 0.3004 0.3053 REMARK 3 27 1.2300 - 1.2200 0.94 3370 201 0.3075 0.3194 REMARK 3 28 1.2200 - 1.2000 0.92 3228 152 0.3275 0.3219 REMARK 3 29 1.2000 - 1.1900 0.91 3283 166 0.3471 0.3809 REMARK 3 30 1.1900 - 1.1800 0.83 2919 149 0.3746 0.3523 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2756 REMARK 3 ANGLE : 0.797 3750 REMARK 3 CHIRALITY : 0.074 396 REMARK 3 PLANARITY : 0.007 472 REMARK 3 DIHEDRAL : 11.690 981 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.5203 -3.0988 26.2037 REMARK 3 T TENSOR REMARK 3 T11: 0.0952 T22: 0.1379 REMARK 3 T33: 0.0550 T12: -0.0025 REMARK 3 T13: -0.0014 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.4472 L22: 2.1313 REMARK 3 L33: 2.3360 L12: 0.4479 REMARK 3 L13: 0.1179 L23: 1.2732 REMARK 3 S TENSOR REMARK 3 S11: -0.0027 S12: 0.0011 S13: 0.0133 REMARK 3 S21: -0.0020 S22: -0.0802 S23: 0.1554 REMARK 3 S31: 0.0466 S32: -0.1729 S33: 0.0765 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4921 -1.0329 10.4810 REMARK 3 T TENSOR REMARK 3 T11: 0.1351 T22: 0.1473 REMARK 3 T33: 0.0499 T12: 0.0048 REMARK 3 T13: -0.0025 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.4530 L22: 0.3063 REMARK 3 L33: 1.1132 L12: 0.1965 REMARK 3 L13: 0.1662 L23: 0.1373 REMARK 3 S TENSOR REMARK 3 S11: 0.0070 S12: 0.0736 S13: -0.0165 REMARK 3 S21: -0.0229 S22: 0.0186 S23: -0.0304 REMARK 3 S31: 0.0106 S32: 0.0844 S33: -0.0230 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 163 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3208 7.9730 18.2513 REMARK 3 T TENSOR REMARK 3 T11: 0.1429 T22: 0.1327 REMARK 3 T33: 0.0459 T12: -0.0289 REMARK 3 T13: 0.0023 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 1.0071 L22: 0.8525 REMARK 3 L33: 2.2970 L12: -0.1262 REMARK 3 L13: 0.2639 L23: -0.2421 REMARK 3 S TENSOR REMARK 3 S11: -0.0195 S12: 0.0536 S13: 0.0731 REMARK 3 S21: 0.0010 S22: 0.0137 S23: -0.0511 REMARK 3 S31: -0.1817 S32: 0.2039 S33: 0.0155 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 225 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7307 2.6674 32.1778 REMARK 3 T TENSOR REMARK 3 T11: 0.1201 T22: 0.1409 REMARK 3 T33: 0.0295 T12: -0.0036 REMARK 3 T13: 0.0008 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.2159 L22: 3.1552 REMARK 3 L33: 2.1085 L12: 0.3159 REMARK 3 L13: -0.2541 L23: 0.8210 REMARK 3 S TENSOR REMARK 3 S11: 0.0251 S12: -0.1012 S13: 0.0629 REMARK 3 S21: 0.0726 S22: 0.0304 S23: -0.0768 REMARK 3 S31: -0.0480 S32: 0.1243 S33: -0.0493 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 262 THROUGH 323 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1452 -8.8220 34.8770 REMARK 3 T TENSOR REMARK 3 T11: 0.1569 T22: 0.1337 REMARK 3 T33: 0.0391 T12: -0.0083 REMARK 3 T13: 0.0069 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 1.0097 L22: 1.4742 REMARK 3 L33: 1.0123 L12: -0.0402 REMARK 3 L13: 0.1023 L23: -0.3553 REMARK 3 S TENSOR REMARK 3 S11: 0.0052 S12: -0.0840 S13: -0.0315 REMARK 3 S21: 0.0830 S22: -0.0072 S23: 0.0324 REMARK 3 S31: 0.1345 S32: -0.0272 S33: -0.0005 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 12NV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-26. REMARK 100 THE DEPOSITION ID IS D_1000306771. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-NOV-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS SIRIUS REMARK 200 BEAMLINE : MANACA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.977200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 108183 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.180 REMARK 200 RESOLUTION RANGE LOW (A) : 45.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 6.716 REMARK 200 R MERGE (I) : 0.03500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.25 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.77600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MAGNESIUM CHLORIDE HEXAHYDRATE; REMARK 280 0.1M TRIS HYDROCHLORIDE PH 8.5; 30% (W/V) PEG 4000, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 33.65550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.61500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 33.65550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.61500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 716 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 741 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 295 69.16 -114.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 746 DISTANCE = 5.94 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 13 O REMARK 620 2 THR A 17 O 85.3 REMARK 620 3 LYS A 19 O 98.1 99.1 REMARK 620 4 CYS A 289 O 94.2 162.9 97.9 REMARK 620 5 HOH A 588 O 95.7 80.7 166.1 82.3 REMARK 620 N 1 2 3 4 DBREF 12NV A -19 323 PDB 12NV 12NV -19 323 SEQRES 1 A 343 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 343 LEU VAL PRO ARG GLY SER HIS MET THR LYS LYS GLU LEU SEQRES 3 A 343 TYR ASP ILE VAL TYR ASN LEU THR TYR LYS THR ASP LYS SEQRES 4 A 343 TYR ALA VAL GLY ALA HIS LEU CYS GLY ASN LEU ASP VAL SEQRES 5 A 343 ASN ARG GLN LEU GLU LEU PHE LYS LYS TYR THR GLY ASP SEQRES 6 A 343 LYS PRO ALA PHE ILE ASP PHE ASP MET HIS SER LEU PRO SEQRES 7 A 343 TYR LYS THR PRO SER ASP VAL ALA LYS ALA ALA ALA GLN SEQRES 8 A 343 LEU LYS ALA PHE THR GLU GLU GLY GLY PHE VAL THR LEU SEQRES 9 A 343 THR ASN HIS TRP VAL VAL PRO THR VAL ASN ILE LYS ASP SEQRES 10 A 343 ALA THR CYS GLN GLY ALA ASN ASN CYS ARG TYR THR LEU SEQRES 11 A 343 THR HIS GLU GLN TYR ARG GLU VAL MET THR PRO GLY THR SEQRES 12 A 343 GLY LEU TYR THR ASN PHE THR ASP GLU LEU ASN GLY THR SEQRES 13 A 343 ALA VAL PHE MET LYS LYS LEU GLU THR LEU GLY ILE PRO SEQRES 14 A 343 VAL ILE TYR ARG PRO LEU HIS GLU GLY ASN GLY ALA TRP SEQRES 15 A 343 PHE TRP TRP GLY VAL HIS LYS ASP LEU GLY VAL ILE GLY SEQRES 16 A 343 LYS ASP VAL ALA ASP LEU PHE ARG PHE VAL HIS ASP TYR SEQRES 17 A 343 TYR GLU ASN LYS CYS GLY ILE HIS ASN ILE LEU TRP GLU SEQRES 18 A 343 PHE ASN THR ALA MET ALA GLY THR TYR GLU GLU MET ALA SEQRES 19 A 343 THR TRP PHE PRO GLY GLU ASP TYR VAL GLN ILE MET SER SEQRES 20 A 343 THR ASP TRP TYR LEU LYS GLU GLY ASP TYR MET GLY TYR SEQRES 21 A 343 TYR GLU LYS PRO MET ALA LEU CYS SER LYS PRO LEU PRO SEQRES 22 A 343 TYR THR ILE ALA GLU PHE GLY GLY ASP GLY ASN TYR PRO SEQRES 23 A 343 MET TRP GLU HIS PRO MET ARG GLU SER LEU GLY TYR VAL SEQRES 24 A 343 ASP ALA GLN LEU GLU LYS GLY GLY LYS CYS ALA PHE ILE SEQRES 25 A 343 GLY PHE TYR PHE ASP TYR PRO ASP ASN ILE ASP TRP THR SEQRES 26 A 343 LEU SER PRO ASN ALA LEU THR LEU LYS ASP PHE LEU GLU SEQRES 27 A 343 ILE LYS LYS THR PHE HET BMA B 1 12 HET BGC B 2 11 HET BGC B 3 11 HET TRS A 401 8 HET MG A 402 1 HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM MG MAGNESIUM ION HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN TRS TRIS BUFFER FORMUL 2 BMA C6 H12 O6 FORMUL 2 BGC 2(C6 H12 O6) FORMUL 3 TRS C4 H12 N O3 1+ FORMUL 4 MG MG 2+ FORMUL 5 HOH *246(H2 O) HELIX 1 AA1 THR A 2 LYS A 16 1 15 HELIX 2 AA2 ASP A 31 GLY A 44 1 14 HELIX 3 AA3 HIS A 55 LYS A 60 5 6 HELIX 4 AA4 THR A 61 GLU A 78 1 18 HELIX 5 AA5 ASN A 94 ALA A 98 5 5 HELIX 6 AA6 GLN A 101 CYS A 106 5 6 HELIX 7 AA7 THR A 111 MET A 119 1 9 HELIX 8 AA8 THR A 123 LEU A 146 1 24 HELIX 9 AA9 HIS A 168 GLY A 172 5 5 HELIX 10 AB1 ILE A 174 ASN A 191 1 18 HELIX 11 AB2 THR A 209 MET A 213 5 5 HELIX 12 AB3 GLY A 219 VAL A 223 5 5 HELIX 13 AB4 ASP A 236 ALA A 246 1 11 HELIX 14 AB5 PRO A 266 HIS A 270 5 5 HELIX 15 AB6 PRO A 271 LYS A 285 1 15 HELIX 16 AB7 THR A 312 LYS A 320 1 9 HELIX 17 AB8 LYS A 321 PHE A 323 5 3 SHEET 1 AA110 ALA A 310 LEU A 311 0 SHEET 2 AA110 TYR A 20 HIS A 25 1 N TYR A 20 O LEU A 311 SHEET 3 AA110 PHE A 291 PHE A 294 1 O PHE A 294 N GLY A 23 SHEET 4 AA110 TYR A 254 GLY A 261 1 N ILE A 256 O PHE A 291 SHEET 5 AA110 ILE A 225 LEU A 232 1 N LEU A 232 O GLY A 260 SHEET 6 AA110 ILE A 198 ALA A 205 1 N PHE A 202 O ILE A 225 SHEET 7 AA110 VAL A 150 TYR A 152 1 N VAL A 150 O LEU A 199 SHEET 8 AA110 PHE A 81 THR A 85 1 N LEU A 84 O ILE A 151 SHEET 9 AA110 PHE A 49 ASP A 53 1 N PHE A 52 O THR A 83 SHEET 10 AA110 TYR A 20 HIS A 25 1 N ALA A 24 O ASP A 51 LINK O4 BMA B 1 C1 BGC B 2 1555 1555 1.39 LINK O4 BGC B 2 C1 BGC B 3 1555 1555 1.46 LINK O LEU A 13 MG MG A 402 1555 1555 2.22 LINK O THR A 17 MG MG A 402 1555 1555 2.49 LINK O LYS A 19 MG MG A 402 1555 1555 2.31 LINK O CYS A 289 MG MG A 402 1555 1555 2.40 LINK MG MG A 402 O HOH A 588 1555 1555 2.42 CISPEP 1 LEU A 232 LYS A 233 0 0.76 CRYST1 67.311 65.230 84.229 90.00 111.27 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014856 0.000000 0.005783 0.00000 SCALE2 0.000000 0.015330 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012740 0.00000 CONECT 109 2675 CONECT 145 2675 CONECT 160 2675 CONECT 2335 2675 CONECT 2633 2634 2639 2643 CONECT 2634 2633 2635 2640 CONECT 2635 2634 2636 2641 CONECT 2636 2635 2637 2642 CONECT 2637 2636 2638 2643 CONECT 2638 2637 2644 CONECT 2639 2633 CONECT 2640 2634 CONECT 2641 2635 CONECT 2642 2636 2650 CONECT 2643 2633 2637 CONECT 2644 2638 CONECT 2645 2646 2650 2651 CONECT 2646 2645 2647 2652 CONECT 2647 2646 2648 2653 CONECT 2648 2647 2649 2654 CONECT 2649 2648 2655 CONECT 2650 2642 2645 2654 CONECT 2651 2645 CONECT 2652 2646 CONECT 2653 2647 2661 CONECT 2654 2648 2650 CONECT 2655 2649 CONECT 2656 2657 2661 2662 CONECT 2657 2656 2658 2663 CONECT 2658 2657 2659 2664 CONECT 2659 2658 2660 2665 CONECT 2660 2659 2666 CONECT 2661 2653 2656 2665 CONECT 2662 2656 CONECT 2663 2657 CONECT 2664 2658 CONECT 2665 2659 2661 CONECT 2666 2660 CONECT 2667 2668 2669 2670 2671 CONECT 2668 2667 2672 CONECT 2669 2667 2673 CONECT 2670 2667 2674 CONECT 2671 2667 CONECT 2672 2668 CONECT 2673 2669 CONECT 2674 2670 CONECT 2675 109 145 160 2335 CONECT 2675 2763 CONECT 2763 2675 MASTER 379 0 5 17 10 0 0 6 2908 1 49 27 END