HEADER DNA BINDING PROTEIN/DNA 19-APR-26 12UP TITLE BCL11B ZF2-3 IN COMPLEX WITH A DNA SEQUENCE OBSERVED IN THE HUMAN TITLE 2 GLOBIN LOCUS CONTAINING MOTIF TGGCCA (OLIGO 4-2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: B-CELL LYMPHOMA/LEUKEMIA 11B; COMPND 3 CHAIN: A, F; COMPND 4 FRAGMENT: DOMAINS ZF2-3; COMPND 5 SYNONYM: BCL-11B,B-CELL CLL/LYMPHOMA 11B,COUP-TF-INTERACTING PROTEIN COMPND 6 2,RADIATION-INDUCED TUMOR SUPPRESSOR GENE 1 PROTEIN,HRIT1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: STRAND TOP; COMPND 10 CHAIN: D, G; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: STRAND BOTTOM; COMPND 14 CHAIN: E, H; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL11B, CTIP2, RIT1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GOLD PLUS; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_TAXID: 9606 KEYWDS TRANSCRIPTION FACTOR, DNA BINDING, TRANSCRIPTION, TRANSCRIPTION-DNA KEYWDS 2 COMPLEX, GLOBIN LOCUS, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.R.HORTON,X.CHENG,J.ZHOU,J.LEE REVDAT 1 01-JUL-26 12UP 0 JRNL AUTH J.LEE,J.ZHOU,J.R.HORTON,M.YU,M.D.MUOGHALU,F.A.KHAN,X.ZHANG, JRNL AUTH 2 Y.HUANG,R.M.BLUMENTHAL,X.ZHANG,X.CHENG JRNL TITL BIPARTITE DNA BINDING DOMAIN OF TRANSCRIPTION FACTOR BCL11B JRNL TITL 2 BINDS CLUSTERED SHORT DNA SEQUENCE MOTIFS. JRNL REF BIORXIV 2026 JRNL REFN ISSN 2692-8205 JRNL PMID 42232506 JRNL DOI 10.64898/2026.05.01.721897 REMARK 2 REMARK 2 RESOLUTION. 2.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 2.0_5885 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 68.5 REMARK 3 NUMBER OF REFLECTIONS : 9905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.640 REMARK 3 FREE R VALUE TEST SET COUNT : 460 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.1500 - 4.0800 0.98 4564 203 0.2160 0.2201 REMARK 3 2 4.0800 - 3.2400 0.83 3790 212 0.2410 0.3353 REMARK 3 3 3.2400 - 2.8300 0.24 1091 45 0.2979 0.3937 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.954 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 7.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2011 REMARK 3 ANGLE : 0.590 2903 REMARK 3 CHIRALITY : 0.033 317 REMARK 3 PLANARITY : 0.003 193 REMARK 3 DIHEDRAL : 28.545 843 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 426 THROUGH 438 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.9540 14.4975 -64.5894 REMARK 3 T TENSOR REMARK 3 T11: 0.4514 T22: 0.9278 REMARK 3 T33: 0.9411 T12: 0.2960 REMARK 3 T13: 0.0988 T23: 0.2529 REMARK 3 L TENSOR REMARK 3 L11: 1.0704 L22: 0.4354 REMARK 3 L33: 0.1355 L12: -0.2889 REMARK 3 L13: 0.0059 L23: 0.2129 REMARK 3 S TENSOR REMARK 3 S11: -0.1287 S12: -0.2340 S13: 0.1918 REMARK 3 S21: 0.0777 S22: 0.0866 S23: 0.0422 REMARK 3 S31: -0.0006 S32: -0.0362 S33: 0.0216 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 439 THROUGH 450 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.0882 10.2037 -64.4820 REMARK 3 T TENSOR REMARK 3 T11: 0.2529 T22: 0.5962 REMARK 3 T33: 0.5911 T12: -0.0527 REMARK 3 T13: -0.0977 T23: 0.2909 REMARK 3 L TENSOR REMARK 3 L11: 8.2090 L22: 6.0663 REMARK 3 L33: 2.6674 L12: -2.3656 REMARK 3 L13: 2.3419 L23: 1.5270 REMARK 3 S TENSOR REMARK 3 S11: -0.0144 S12: -0.4135 S13: -0.2025 REMARK 3 S21: 0.0281 S22: 0.0216 S23: 0.5091 REMARK 3 S31: 0.1033 S32: -0.3997 S33: -0.0585 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 451 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5191 4.6950 -64.4072 REMARK 3 T TENSOR REMARK 3 T11: 0.2173 T22: 0.3962 REMARK 3 T33: 0.4523 T12: -0.1437 REMARK 3 T13: 0.0821 T23: 0.0424 REMARK 3 L TENSOR REMARK 3 L11: 2.4152 L22: 2.0825 REMARK 3 L33: 2.5719 L12: 0.2351 REMARK 3 L13: -0.1281 L23: -0.5834 REMARK 3 S TENSOR REMARK 3 S11: -0.0215 S12: -0.0022 S13: 0.0260 REMARK 3 S21: -0.0260 S22: 0.0065 S23: 0.1511 REMARK 3 S31: 0.0683 S32: -0.0823 S33: -0.0436 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 456 THROUGH 466 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4066 3.1001 -60.5605 REMARK 3 T TENSOR REMARK 3 T11: 0.2155 T22: 0.4282 REMARK 3 T33: 0.6570 T12: -0.0115 REMARK 3 T13: -0.0828 T23: 0.2180 REMARK 3 L TENSOR REMARK 3 L11: 2.7760 L22: 0.4304 REMARK 3 L33: 1.3973 L12: 0.6912 REMARK 3 L13: 1.5089 L23: 0.7619 REMARK 3 S TENSOR REMARK 3 S11: 0.0620 S12: 0.0735 S13: -0.4678 REMARK 3 S21: 0.0967 S22: 0.0825 S23: -0.1873 REMARK 3 S31: 0.1858 S32: 0.2618 S33: -0.1116 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 467 THROUGH 478 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4010 9.4493 -55.4213 REMARK 3 T TENSOR REMARK 3 T11: 0.4562 T22: 0.2653 REMARK 3 T33: 0.7508 T12: -0.0232 REMARK 3 T13: 0.1478 T23: 0.0832 REMARK 3 L TENSOR REMARK 3 L11: 0.6107 L22: 2.3330 REMARK 3 L33: 6.9841 L12: 0.1769 REMARK 3 L13: 0.2234 L23: -1.3941 REMARK 3 S TENSOR REMARK 3 S11: -0.1263 S12: 0.2299 S13: 0.1928 REMARK 3 S21: 0.1112 S22: -0.2920 S23: -1.2968 REMARK 3 S31: -0.0814 S32: 0.8435 S33: 0.4953 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6129 13.4549 -53.1023 REMARK 3 T TENSOR REMARK 3 T11: 0.7206 T22: 0.4980 REMARK 3 T33: 0.5632 T12: -0.0574 REMARK 3 T13: 0.0659 T23: 0.3350 REMARK 3 L TENSOR REMARK 3 L11: 0.1788 L22: 0.0038 REMARK 3 L33: 0.3253 L12: -0.0271 REMARK 3 L13: -0.2414 L23: 0.0358 REMARK 3 S TENSOR REMARK 3 S11: 0.0459 S12: -0.0957 S13: -0.0656 REMARK 3 S21: 0.4091 S22: -0.0139 S23: 0.2487 REMARK 3 S31: -0.1623 S32: -0.0702 S33: -0.3968 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 1 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4402 16.3966 -54.2756 REMARK 3 T TENSOR REMARK 3 T11: 0.7912 T22: 0.4820 REMARK 3 T33: 0.4424 T12: 0.0200 REMARK 3 T13: 0.0206 T23: 0.2769 REMARK 3 L TENSOR REMARK 3 L11: 1.0534 L22: 1.0042 REMARK 3 L33: 1.8785 L12: 0.4282 REMARK 3 L13: -1.3965 L23: -0.4161 REMARK 3 S TENSOR REMARK 3 S11: 0.2141 S12: -0.0753 S13: 0.1280 REMARK 3 S21: 0.1276 S22: 0.0154 S23: 0.0855 REMARK 3 S31: -0.2881 S32: -0.0118 S33: 0.1224 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 427 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.8130 -3.6687 -16.6848 REMARK 3 T TENSOR REMARK 3 T11: 0.2643 T22: 0.4309 REMARK 3 T33: 0.6852 T12: -0.1423 REMARK 3 T13: -0.0693 T23: 0.1466 REMARK 3 L TENSOR REMARK 3 L11: 2.2664 L22: 1.6031 REMARK 3 L33: 1.3927 L12: 0.3271 REMARK 3 L13: -0.4413 L23: -0.2798 REMARK 3 S TENSOR REMARK 3 S11: -0.1737 S12: 0.2801 S13: 0.0311 REMARK 3 S21: -0.0097 S22: -0.0429 S23: 0.3402 REMARK 3 S31: 0.1217 S32: -0.2978 S33: 0.1070 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 456 THROUGH 478 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0457 0.9178 -21.3673 REMARK 3 T TENSOR REMARK 3 T11: 0.5564 T22: 1.1276 REMARK 3 T33: 0.9966 T12: -0.1480 REMARK 3 T13: -0.3098 T23: 0.4155 REMARK 3 L TENSOR REMARK 3 L11: 1.5345 L22: 0.6504 REMARK 3 L33: 0.3690 L12: 0.1922 REMARK 3 L13: -0.4697 L23: 0.3169 REMARK 3 S TENSOR REMARK 3 S11: -0.3343 S12: 0.4963 S13: 0.8362 REMARK 3 S21: -0.0374 S22: -0.0052 S23: -0.4544 REMARK 3 S31: -0.4045 S32: 0.9494 S33: 0.3069 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 1 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3521 -6.1488 -27.1343 REMARK 3 T TENSOR REMARK 3 T11: 0.9732 T22: 0.7116 REMARK 3 T33: 0.6570 T12: 0.0423 REMARK 3 T13: 0.0412 T23: 0.4299 REMARK 3 L TENSOR REMARK 3 L11: 0.6401 L22: 0.3820 REMARK 3 L33: 0.9097 L12: -0.3753 REMARK 3 L13: -0.2200 L23: -0.2381 REMARK 3 S TENSOR REMARK 3 S11: -0.1463 S12: 0.0365 S13: 0.1297 REMARK 3 S21: -0.4542 S22: 0.0666 S23: 0.0984 REMARK 3 S31: -0.1383 S32: 0.1474 S33: 0.0509 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 2 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7412 -9.8031 -24.8649 REMARK 3 T TENSOR REMARK 3 T11: 0.9564 T22: 0.7394 REMARK 3 T33: 0.5838 T12: -0.0571 REMARK 3 T13: 0.1245 T23: 0.3672 REMARK 3 L TENSOR REMARK 3 L11: 1.0723 L22: 2.3020 REMARK 3 L33: 2.4105 L12: -0.8287 REMARK 3 L13: 1.5470 L23: -0.7325 REMARK 3 S TENSOR REMARK 3 S11: 0.0721 S12: -0.1659 S13: -0.2462 REMARK 3 S21: -0.1930 S22: -0.0870 S23: -0.1529 REMARK 3 S31: 0.6504 S32: 0.2796 S33: 0.0357 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 427 through 458 or REMARK 3 (resid 459 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 460 or REMARK 3 (resid 461 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 462 REMARK 3 through 474 or (resid 475 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 476 through 478)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "F" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : ens_2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "D" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "G" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : ens_3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "E" and resid 2 through 13) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "H" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 12UP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-26. REMARK 100 THE DEPOSITION ID IS D_1000307198. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.919716 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14314 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.830 REMARK 200 RESOLUTION RANGE LOW (A) : 34.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.88 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% W/V POLYETHYLENE GLYCOL MONOMETHYL REMARK 280 ETHER 2,000, 0.15 M POTASSIUM BROMIDE, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 418 REMARK 465 PRO A 419 REMARK 465 LEU A 420 REMARK 465 GLY A 421 REMARK 465 SER A 422 REMARK 465 PRO A 423 REMARK 465 ALA A 424 REMARK 465 LYS A 425 REMARK 465 HIS A 479 REMARK 465 LYS A 480 REMARK 465 ALA A 481 REMARK 465 GLY A 482 REMARK 465 SER A 483 REMARK 465 GLY F 418 REMARK 465 PRO F 419 REMARK 465 LEU F 420 REMARK 465 GLY F 421 REMARK 465 SER F 422 REMARK 465 PRO F 423 REMARK 465 ALA F 424 REMARK 465 LYS F 425 REMARK 465 SER F 426 REMARK 465 HIS F 479 REMARK 465 LYS F 480 REMARK 465 ALA F 481 REMARK 465 GLY F 482 REMARK 465 SER F 483 REMARK 465 DA H 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 434 CG CD CE NZ REMARK 470 LYS A 437 CG CD CE NZ REMARK 470 MET A 478 CG SD CE REMARK 470 LYS F 434 CG CD CE NZ REMARK 470 LYS F 437 CG CD CE NZ REMARK 470 LEU F 459 CG CD1 CD2 REMARK 470 ASP F 461 CG OD1 OD2 REMARK 470 LYS F 475 CG CD CE NZ REMARK 470 MET F 478 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC G 8 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 435 70.99 57.60 REMARK 500 LEU F 459 -60.51 -92.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 429 SG REMARK 620 2 CYS A 432 SG 117.7 REMARK 620 3 HIS A 445 NE2 110.5 62.0 REMARK 620 4 HIS A 449 NE2 114.5 127.5 104.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 457 SG REMARK 620 2 CYS A 460 SG 115.2 REMARK 620 3 HIS A 473 NE2 115.0 76.7 REMARK 620 4 HIS A 477 NE2 133.4 94.1 106.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN F 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS F 429 SG REMARK 620 2 CYS F 432 SG 110.7 REMARK 620 3 HIS F 445 NE2 106.2 77.2 REMARK 620 4 HIS F 449 NE2 103.4 144.7 102.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN F 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS F 457 SG REMARK 620 2 CYS F 460 SG 116.3 REMARK 620 3 HIS F 473 NE2 116.8 78.6 REMARK 620 4 HIS F 477 NE2 133.5 95.1 101.8 REMARK 620 N 1 2 3 DBREF 12UP A 423 483 UNP Q9C0K0 BC11B_HUMAN 423 483 DBREF 12UP D 1 13 PDB 12UP 12UP 1 13 DBREF 12UP E 1 13 PDB 12UP 12UP 1 13 DBREF 12UP F 423 483 UNP Q9C0K0 BC11B_HUMAN 423 483 DBREF 12UP G 1 13 PDB 12UP 12UP 1 13 DBREF 12UP H 1 13 PDB 12UP 12UP 1 13 SEQADV 12UP GLY A 418 UNP Q9C0K0 EXPRESSION TAG SEQADV 12UP PRO A 419 UNP Q9C0K0 EXPRESSION TAG SEQADV 12UP LEU A 420 UNP Q9C0K0 EXPRESSION TAG SEQADV 12UP GLY A 421 UNP Q9C0K0 EXPRESSION TAG SEQADV 12UP SER A 422 UNP Q9C0K0 EXPRESSION TAG SEQADV 12UP GLY F 418 UNP Q9C0K0 EXPRESSION TAG SEQADV 12UP PRO F 419 UNP Q9C0K0 EXPRESSION TAG SEQADV 12UP LEU F 420 UNP Q9C0K0 EXPRESSION TAG SEQADV 12UP GLY F 421 UNP Q9C0K0 EXPRESSION TAG SEQADV 12UP SER F 422 UNP Q9C0K0 EXPRESSION TAG SEQRES 1 A 66 GLY PRO LEU GLY SER PRO ALA LYS SER LYS SER CYS GLU SEQRES 2 A 66 PHE CYS GLY LYS THR PHE LYS PHE GLN SER ASN LEU ILE SEQRES 3 A 66 VAL HIS ARG ARG SER HIS THR GLY GLU LYS PRO TYR LYS SEQRES 4 A 66 CYS GLN LEU CYS ASP HIS ALA CYS SER GLN ALA SER LYS SEQRES 5 A 66 LEU LYS ARG HIS MET LYS THR HIS MET HIS LYS ALA GLY SEQRES 6 A 66 SER SEQRES 1 D 13 DG DA DA DT DG DG DC DC DA DT DC DT DC SEQRES 1 E 13 DA DG DA DT DG DG DC DC DA DT DT DC DG SEQRES 1 F 66 GLY PRO LEU GLY SER PRO ALA LYS SER LYS SER CYS GLU SEQRES 2 F 66 PHE CYS GLY LYS THR PHE LYS PHE GLN SER ASN LEU ILE SEQRES 3 F 66 VAL HIS ARG ARG SER HIS THR GLY GLU LYS PRO TYR LYS SEQRES 4 F 66 CYS GLN LEU CYS ASP HIS ALA CYS SER GLN ALA SER LYS SEQRES 5 F 66 LEU LYS ARG HIS MET LYS THR HIS MET HIS LYS ALA GLY SEQRES 6 F 66 SER SEQRES 1 G 13 DG DA DA DT DG DG DC DC DA DT DC DT DC SEQRES 1 H 13 DA DG DA DT DG DG DC DC DA DT DT DC DG HET ZN A 501 1 HET ZN A 502 1 HET BR E 101 1 HET BR E 102 1 HET ZN F 501 1 HET ZN F 502 1 HET BR F 503 1 HET BR H 101 1 HETNAM ZN ZINC ION HETNAM BR BROMIDE ION FORMUL 7 ZN 4(ZN 2+) FORMUL 9 BR 4(BR 1-) FORMUL 15 HOH *15(H2 O) HELIX 1 AA1 PHE A 438 GLY A 451 1 14 HELIX 2 AA2 GLN A 466 MET A 478 1 13 HELIX 3 AA3 PHE F 438 GLY F 451 1 14 HELIX 4 AA4 GLN F 466 MET F 478 1 13 SHEET 1 AA1 2 TYR A 455 LYS A 456 0 SHEET 2 AA1 2 ALA A 463 CYS A 464 -1 O CYS A 464 N TYR A 455 SHEET 1 AA2 2 TYR F 455 LYS F 456 0 SHEET 2 AA2 2 ALA F 463 CYS F 464 -1 O CYS F 464 N TYR F 455 LINK SG CYS A 429 ZN ZN A 502 1555 1555 2.31 LINK SG CYS A 432 ZN ZN A 502 1555 1555 2.31 LINK NE2 HIS A 445 ZN ZN A 502 1555 1555 2.05 LINK NE2 HIS A 449 ZN ZN A 502 1555 1555 2.02 LINK SG CYS A 457 ZN ZN A 501 1555 1555 2.31 LINK SG CYS A 460 ZN ZN A 501 1555 1555 2.29 LINK NE2 HIS A 473 ZN ZN A 501 1555 1555 2.05 LINK NE2 HIS A 477 ZN ZN A 501 1555 1555 2.07 LINK SG CYS F 429 ZN ZN F 502 1555 1555 2.31 LINK SG CYS F 432 ZN ZN F 502 1555 1555 2.31 LINK NE2 HIS F 445 ZN ZN F 502 1555 1555 2.05 LINK NE2 HIS F 449 ZN ZN F 502 1555 1555 2.03 LINK SG CYS F 457 ZN ZN F 501 1555 1555 2.30 LINK SG CYS F 460 ZN ZN F 501 1555 1555 2.31 LINK NE2 HIS F 473 ZN ZN F 501 1555 1555 2.01 LINK NE2 HIS F 477 ZN ZN F 501 1555 1555 2.01 CRYST1 35.167 38.701 59.860 97.11 98.65 99.71 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028436 0.004863 0.005133 0.00000 SCALE2 0.000000 0.026214 0.004059 0.00000 SCALE3 0.000000 0.000000 0.017099 0.00000 MTRIX1 1 0.995291 0.022238 0.094351 3.22612 1 MTRIX2 1 0.021729 -0.999743 0.006416 7.58263 1 MTRIX3 1 0.094469 -0.004336 -0.995518 -80.36132 1 MTRIX1 2 0.994926 0.024535 0.097568 3.61257 1 MTRIX2 2 0.025579 -0.999628 -0.009463 6.67510 1 MTRIX3 2 0.097300 0.011911 -0.995184 -80.58867 1 MTRIX1 3 0.993622 0.040829 0.105114 3.81621 1 MTRIX2 3 0.042129 -0.999060 -0.010178 6.57176 1 MTRIX3 3 0.104600 0.014541 -0.994408 -80.63033 1 CONECT 27 1862 CONECT 53 1862 CONECT 152 1862 CONECT 190 1862 CONECT 253 1861 CONECT 276 1861 CONECT 378 1861 CONECT 412 1861 CONECT 968 1866 CONECT 994 1866 CONECT 1093 1866 CONECT 1131 1866 CONECT 1194 1865 CONECT 1214 1865 CONECT 1313 1865 CONECT 1343 1865 CONECT 1861 253 276 378 412 CONECT 1862 27 53 152 190 CONECT 1865 1194 1214 1313 1343 CONECT 1866 968 994 1093 1131 MASTER 518 0 8 4 4 0 0 15 1877 6 20 16 END