data_135D # _entry.id 135D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 135D pdb_0000135d 10.2210/pdb135d/pdb WWPDB D_1000170083 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 134D 'MINIMIZED AVERAGE STRUCTURE' unspecified PDB 136D 'ENSEMBLE OF 14 STRUCTURES' ensemble # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 135D _pdbx_database_status.recvd_initial_deposition_date 1993-08-30 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Radhakrishnan, I.' 1 'Patel, D.J.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Solution structure of a purine.purine.pyrimidine DNA triplex containing G.GC and T.AT triples.' Structure 1 135 152 1993 STRUE6 UK 0969-2126 2005 ? 8069626 '10.1016/0969-2126(93)90028-F' 1 'Solution Structure of an Intramolecular Purine(Dot)Purine(Dot)Pyrimidine DNA Triplex' J.Am.Chem.Soc. 115 1615 ? 1993 JACSAT US 0002-7863 0004 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Radhakrishnan, I.' 1 ? primary 'Patel, D.J.' 2 ? 1 'Radhakrishnan, I.' 3 ? 1 'Patel, D.J.' 4 ? # _cell.entry_id 135D _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 135D _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'DNA TRIPLEX' _entity.formula_weight 9552.122 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_keywords.entity_id 1 _entity_keywords.text 'DEOXYRIBONUCLEIC ACID' # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DT)(DC)(DC)(DT)(DC)(DC)(DT)(DT)(DT)(DT)(DT)(DT)(DA)(DG)(DG)(DA)(DG)(DG)(DA)(DT) (DT)(DT)(DT)(DT)(DT)(DG)(DG)(DT)(DG)(DG)(DT) ; _entity_poly.pdbx_seq_one_letter_code_can TCCTCCTTTTTTAGGAGGATTTTTTGGTGGT _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DC n 1 3 DC n 1 4 DT n 1 5 DC n 1 6 DC n 1 7 DT n 1 8 DT n 1 9 DT n 1 10 DT n 1 11 DT n 1 12 DT n 1 13 DA n 1 14 DG n 1 15 DG n 1 16 DA n 1 17 DG n 1 18 DG n 1 19 DA n 1 20 DT n 1 21 DT n 1 22 DT n 1 23 DT n 1 24 DT n 1 25 DT n 1 26 DG n 1 27 DG n 1 28 DT n 1 29 DG n 1 30 DG n 1 31 DT n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'CHEMICALLY SYNTHESIZED' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 135D _struct_ref.pdbx_db_accession 135D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 135D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 31 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 135D _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 21 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # _pdbx_nmr_refine.entry_id 135D _pdbx_nmr_refine.method 'RESTRAINED MOLECULAR DYNAMICS, DISTANCE GEOMETRY' _pdbx_nmr_refine.details ;RESTRAINED MOLECULAR DYNAMICS CALCULATIONS WERE DONE ONIDEALIZED A'- AND B-FORM STARTING STRUCTURES. ONLY THE TRIPLEX REGION AND THE FIRST AND LAST RESIDUES OF EACH OF THE TWO LOOPS IN THE SEQUENCE WERE CONSIDERED. THE REFINEMENT WAS CONDUCTED IN TWO STAGES. IN THE FIRST STAGE, SIX STRUCTURES WERE CALCULATED (THREE FROM EACH STARTING STRUCTURE) USING DISTANCE RESTRAINTS. IN THE SECOND STAGE, TWO OF THE SIX STRUCTURES WERE REFINED DIRECTLY AGAINST PRIMARY NOE DATA. THE R(1/6) VALUE WAS USED TO MONITOR THE REFINEMENT DURING THIS STAGE. THE FINAL R(1/6) VALUES FOR THE TWO AVERAGED MINIMIZED STRUCTURES WERE 0.04 AND 0.045. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 135D _pdbx_nmr_ensemble.conformers_calculated_total_number ? _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_software.name X-PLOR _pdbx_nmr_software.version ? _pdbx_nmr_software.classification refinement _pdbx_nmr_software.authors BRUNGER _pdbx_nmr_software.ordinal 1 # _exptl.entry_id 135D _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 135D _struct.title 'SOLUTION STRUCTURE OF A PURINE(DOT)PURINE(DOT)PYRIMIDINE DNA TRIPLEX CONTAINING G(DOT)GC AND T(DOT)AT TRIPLES' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 135D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DNA, TRIPLEX' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 A DA 19 N1 ? ? A DT 1 A DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 A DA 19 N6 ? ? A DT 1 A DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 18 N1 ? ? A DC 2 A DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 18 O6 ? ? A DC 2 A DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 18 N2 ? ? A DC 2 A DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 17 N1 ? ? A DC 3 A DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 17 O6 ? ? A DC 3 A DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 17 N2 ? ? A DC 3 A DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DA 16 N1 ? ? A DT 4 A DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DA 16 N6 ? ? A DT 4 A DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 15 N1 ? ? A DC 5 A DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 15 O6 ? ? A DC 5 A DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 15 N2 ? ? A DC 5 A DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 14 N1 ? ? A DC 6 A DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 14 O6 ? ? A DC 6 A DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 14 N2 ? ? A DC 6 A DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 N3 ? ? ? 1_555 A DA 13 N1 ? ? A DT 7 A DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 7 O4 ? ? ? 1_555 A DA 13 N6 ? ? A DT 7 A DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 N3 ? L ? 1_555 A DT 12 O4 ? L A DT 1 A DT 5 1_555 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? hydrog20 hydrog ? ? A DA 13 N6 ? ? ? 1_555 A DT 31 O2 ? ? A DA 8 A DT 21 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog21 hydrog ? ? A DA 13 N7 ? ? ? 1_555 A DT 31 N3 ? ? A DA 8 A DT 21 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog22 hydrog ? ? A DG 14 N7 ? ? ? 1_555 A DG 30 N1 ? ? A DG 9 A DG 20 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog23 hydrog ? ? A DG 14 O6 ? ? ? 1_555 A DG 30 N2 ? ? A DG 9 A DG 20 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog24 hydrog ? ? A DG 15 N7 ? ? ? 1_555 A DG 29 N1 ? ? A DG 10 A DG 19 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog25 hydrog ? ? A DG 15 O6 ? ? ? 1_555 A DG 29 N2 ? ? A DG 10 A DG 19 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog26 hydrog ? ? A DA 16 N6 ? ? ? 1_555 A DT 28 O2 ? ? A DA 11 A DT 18 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog27 hydrog ? ? A DA 16 N7 ? ? ? 1_555 A DT 28 N3 ? ? A DA 11 A DT 18 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog28 hydrog ? ? A DG 17 N7 ? ? ? 1_555 A DG 27 N1 ? ? A DG 12 A DG 17 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog29 hydrog ? ? A DG 17 O6 ? ? ? 1_555 A DG 27 N2 ? ? A DG 12 A DG 17 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog30 hydrog ? ? A DG 18 N7 ? ? ? 1_555 A DG 26 N1 ? ? A DG 13 A DG 16 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog31 hydrog ? ? A DG 18 O6 ? ? ? 1_555 A DG 26 N2 ? ? A DG 13 A DG 16 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog32 hydrog ? ? A DA 19 N6 ? ? ? 1_555 A DT 25 O2 ? ? A DA 14 A DT 15 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog33 hydrog ? ? A DA 19 N7 ? ? ? 1_555 A DT 25 N3 ? ? A DA 14 A DT 15 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog34 hydrog ? ? A DT 20 N3 ? L ? 1_555 A DT 24 O2 ? L A DT 6 A DT 10 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog35 hydrog ? ? A DT 20 O2 ? L ? 1_555 A DT 24 N3 ? L A DT 6 A DT 10 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 135D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 135D _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DC 6 6 6 DC C A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DT 8 1 1 DT T A L n A 1 9 DT 9 2 ? ? ? A L n A 1 10 DT 10 3 ? ? ? A L n A 1 11 DT 11 4 ? ? ? A L n A 1 12 DT 12 5 5 DT T A L n A 1 13 DA 13 8 8 DA A A . n A 1 14 DG 14 9 9 DG G A . n A 1 15 DG 15 10 10 DG G A . n A 1 16 DA 16 11 11 DA A A . n A 1 17 DG 17 12 12 DG G A . n A 1 18 DG 18 13 13 DG G A . n A 1 19 DA 19 14 14 DA A A . n A 1 20 DT 20 6 6 DT T A L n A 1 21 DT 21 7 ? ? ? A L n A 1 22 DT 22 8 ? ? ? A L n A 1 23 DT 23 9 ? ? ? A L n A 1 24 DT 24 10 10 DT T A L n A 1 25 DT 25 15 15 DT T A . n A 1 26 DG 26 16 16 DG G A . n A 1 27 DG 27 17 17 DG G A . n A 1 28 DT 28 18 18 DT T A . n A 1 29 DG 29 19 19 DG G A . n A 1 30 DG 30 20 20 DG G A . n A 1 31 DT 31 21 21 DT T A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-04-30 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C3'" A DT 1 ? ? "C2'" A DT 1 ? ? 1.596 1.518 0.078 0.012 N 2 1 "C2'" A DT 1 ? ? "C1'" A DT 1 ? ? 1.582 1.519 0.063 0.010 N 3 1 C5 A DT 1 ? ? C7 A DT 1 ? ? 1.534 1.496 0.038 0.006 N 4 1 N1 A DC 2 ? ? C6 A DC 2 ? ? 1.407 1.367 0.040 0.006 N 5 1 N1 A DC 3 ? ? C6 A DC 3 ? ? 1.404 1.367 0.037 0.006 N 6 1 C5 A DT 4 ? ? C7 A DT 4 ? ? 1.538 1.496 0.042 0.006 N 7 1 N1 A DC 5 ? ? C6 A DC 5 ? ? 1.414 1.367 0.047 0.006 N 8 1 C5 A DT 7 ? ? C7 A DT 7 ? ? 1.546 1.496 0.050 0.006 N 9 1 C5 A DT 5 L ? C7 A DT 5 L ? 1.538 1.496 0.042 0.006 N 10 1 "C2'" A DA 8 ? ? "C1'" A DA 8 ? ? 1.584 1.519 0.065 0.010 N 11 1 "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? 1.646 1.529 0.117 0.010 N 12 1 "C3'" A DG 9 ? ? "C2'" A DG 9 ? ? 1.642 1.518 0.124 0.012 N 13 1 "C2'" A DG 9 ? ? "C1'" A DG 9 ? ? 1.582 1.519 0.063 0.010 N 14 1 "C4'" A DA 11 ? ? "C3'" A DA 11 ? ? 1.590 1.529 0.061 0.010 N 15 1 "C3'" A DA 11 ? ? "C2'" A DA 11 ? ? 1.618 1.518 0.100 0.012 N 16 1 "C3'" A DT 6 L ? "C2'" A DT 6 L ? 1.600 1.518 0.082 0.012 N 17 1 "C2'" A DT 6 L ? "C1'" A DT 6 L ? 1.621 1.519 0.102 0.010 N 18 1 "C3'" A DT 15 ? ? "C2'" A DT 15 ? ? 1.641 1.518 0.123 0.012 N 19 1 "C2'" A DT 15 ? ? "C1'" A DT 15 ? ? 1.582 1.519 0.063 0.010 N 20 1 "C2'" A DG 17 ? ? "C1'" A DG 17 ? ? 1.602 1.519 0.083 0.010 N 21 1 "C3'" A DT 18 ? ? "C2'" A DT 18 ? ? 1.646 1.518 0.128 0.012 N 22 1 "C2'" A DT 18 ? ? "C1'" A DT 18 ? ? 1.630 1.519 0.111 0.010 N 23 1 C5 A DT 18 ? ? C7 A DT 18 ? ? 1.539 1.496 0.043 0.006 N 24 1 "C2'" A DG 19 ? ? "C1'" A DG 19 ? ? 1.604 1.519 0.085 0.010 N 25 1 "C3'" A DG 20 ? ? "C2'" A DG 20 ? ? 1.595 1.518 0.077 0.012 N 26 1 "C2'" A DG 20 ? ? "C1'" A DG 20 ? ? 1.617 1.519 0.098 0.010 N 27 1 "C4'" A DT 21 ? ? "C3'" A DT 21 ? ? 1.609 1.529 0.080 0.010 N 28 1 C5 A DT 21 ? ? C7 A DT 21 ? ? 1.537 1.496 0.041 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? "C2'" A DT 1 ? ? 99.98 105.90 -5.92 0.80 N 2 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.93 108.30 2.63 0.30 N 3 1 "C4'" A DC 2 ? ? "C3'" A DC 2 ? ? "C2'" A DC 2 ? ? 97.96 102.20 -4.24 0.70 N 4 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? "C2'" A DC 2 ? ? 100.84 105.90 -5.06 0.80 N 5 1 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.15 118.90 4.25 0.60 N 6 1 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 117.62 121.90 -4.28 0.70 N 7 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 100.86 108.00 -7.14 0.70 N 8 1 "C1'" A DT 4 ? ? "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? 102.47 110.10 -7.63 1.00 N 9 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 99.02 105.90 -6.88 0.80 N 10 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 116.79 108.30 8.49 0.30 N 11 1 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 118.47 122.30 -3.83 0.60 N 12 1 N1 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 122.89 118.90 3.99 0.60 N 13 1 "C1'" A DT 7 ? ? "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? 103.04 110.10 -7.06 1.00 N 14 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? "C2'" A DT 7 ? ? 99.51 105.90 -6.39 0.80 N 15 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 112.78 108.30 4.48 0.30 N 16 1 C6 A DT 1 L ? C5 A DT 1 L ? C7 A DT 1 L ? 118.08 122.90 -4.82 0.60 N 17 1 C6 A DT 5 L ? C5 A DT 5 L ? C7 A DT 5 L ? 118.99 122.90 -3.91 0.60 N 18 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.19 108.30 1.89 0.30 N 19 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 100.98 105.90 -4.92 0.80 N 20 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.52 108.30 3.22 0.30 N 21 1 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 112.94 108.30 4.64 0.30 N 22 1 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? "C2'" A DG 13 ? ? 97.11 105.90 -8.79 0.80 N 23 1 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 113.19 108.30 4.89 0.30 N 24 1 "O4'" A DA 14 ? ? "C1'" A DA 14 ? ? N9 A DA 14 ? ? 115.21 108.30 6.91 0.30 N 25 1 "O4'" A DT 6 L ? "C1'" A DT 6 L ? N1 A DT 6 L ? 99.27 108.00 -8.73 0.70 N 26 1 C4 A DT 6 L ? C5 A DT 6 L ? C6 A DT 6 L ? 122.11 118.00 4.11 0.60 N 27 1 C6 A DT 6 L ? C5 A DT 6 L ? C7 A DT 6 L ? 119.15 122.90 -3.75 0.60 N 28 1 "C1'" A DT 10 L ? "O4'" A DT 10 L ? "C4'" A DT 10 L ? 103.75 110.10 -6.35 1.00 N 29 1 "O4'" A DT 10 L ? "C1'" A DT 10 L ? "C2'" A DT 10 L ? 100.21 105.90 -5.69 0.80 N 30 1 "O4'" A DT 10 L ? "C1'" A DT 10 L ? N1 A DT 10 L ? 111.48 108.30 3.18 0.30 N 31 1 "C1'" A DT 15 ? ? "O4'" A DT 15 ? ? "C4'" A DT 15 ? ? 101.73 110.10 -8.37 1.00 N 32 1 "C4'" A DT 15 ? ? "C3'" A DT 15 ? ? "C2'" A DT 15 ? ? 93.72 102.20 -8.48 0.70 N 33 1 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 114.02 108.30 5.72 0.30 N 34 1 N1 A DT 15 ? ? C2 A DT 15 ? ? N3 A DT 15 ? ? 118.55 114.60 3.95 0.60 N 35 1 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 118.98 122.90 -3.92 0.60 N 36 1 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? "C2'" A DG 16 ? ? 100.76 105.90 -5.14 0.80 N 37 1 "C1'" A DG 17 ? ? "O4'" A DG 17 ? ? "C4'" A DG 17 ? ? 114.65 110.30 4.35 0.70 N 38 1 "C4'" A DT 18 ? ? "C3'" A DT 18 ? ? "C2'" A DT 18 ? ? 97.73 102.20 -4.47 0.70 N 39 1 N3 A DT 18 ? ? C2 A DT 18 ? ? O2 A DT 18 ? ? 118.66 122.30 -3.64 0.60 N 40 1 C6 A DT 18 ? ? C5 A DT 18 ? ? C7 A DT 18 ? ? 117.06 122.90 -5.84 0.60 N 41 1 "O3'" A DG 19 ? ? P A DG 20 ? ? "O5'" A DG 20 ? ? 92.40 104.00 -11.60 1.90 Y 42 1 "C1'" A DG 20 ? ? "O4'" A DG 20 ? ? "C4'" A DG 20 ? ? 115.92 110.30 5.62 0.70 N 43 1 "O4'" A DT 21 ? ? "C4'" A DT 21 ? ? "C3'" A DT 21 ? ? 100.95 104.50 -3.55 0.40 N 44 1 "C1'" A DT 21 ? ? "O4'" A DT 21 ? ? "C4'" A DT 21 ? ? 103.76 110.10 -6.34 1.00 N 45 1 "C4'" A DT 21 ? ? "C3'" A DT 21 ? ? "C2'" A DT 21 ? ? 96.98 102.20 -5.22 0.70 N 46 1 C6 A DT 21 ? ? C5 A DT 21 ? ? C7 A DT 21 ? ? 119.28 122.90 -3.62 0.60 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A DT 5 L P ? A DT 12 P 2 1 Y 1 A DT 5 L OP1 ? A DT 12 OP1 3 1 Y 1 A DT 5 L OP2 ? A DT 12 OP2 4 1 Y 1 A DT 10 L P ? A DT 24 P 5 1 Y 1 A DT 10 L OP1 ? A DT 24 OP1 6 1 Y 1 A DT 10 L OP2 ? A DT 24 OP2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A DT 2 L A DT 9 2 1 Y 1 A DT 3 L A DT 10 3 1 Y 1 A DT 4 L A DT 11 4 1 Y 1 A DT 7 L A DT 21 5 1 Y 1 A DT 8 L A DT 22 6 1 Y 1 A DT 9 L A DT 23 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 135D 'double helix' 135D 'b-form double helix' 135D 'hairpin loop' 135D 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 12 1_555 A DT 8 1_555 -2.477 -1.574 0.755 -14.402 -5.362 -10.408 1 A_DT5L:DT1L_A A 5 L A 1 L ? ? 1 A DA 13 1_555 A DT 7 1_555 0.032 -0.162 0.112 7.295 -7.242 1.453 2 A_DA8:DT7_A A 8 ? A 7 ? 20 1 1 A DG 14 1_555 A DC 6 1_555 -0.683 -0.339 -0.512 -1.477 -10.757 0.949 3 A_DG9:DC6_A A 9 ? A 6 ? 19 1 1 A DG 15 1_555 A DC 5 1_555 -0.393 -0.253 0.176 -6.828 -4.426 -2.597 4 A_DG10:DC5_A A 10 ? A 5 ? 19 1 1 A DA 16 1_555 A DT 4 1_555 0.003 -0.221 0.233 0.152 -13.855 4.230 5 A_DA11:DT4_A A 11 ? A 4 ? 20 1 1 A DG 17 1_555 A DC 3 1_555 -0.755 -0.349 -0.307 -7.273 -14.638 2.937 6 A_DG12:DC3_A A 12 ? A 3 ? 19 1 1 A DG 18 1_555 A DC 2 1_555 -0.291 -0.175 -0.171 -5.824 -4.620 -3.751 7 A_DG13:DC2_A A 13 ? A 2 ? 19 1 1 A DA 19 1_555 A DT 1 1_555 -0.005 -0.504 -1.180 -14.662 -17.342 5.462 8 A_DA14:DT1_A A 14 ? A 1 ? 20 1 1 A DT 20 1_555 A DT 24 1_555 2.943 3.435 -0.849 -38.856 -6.894 152.402 9 A_DT6L:DT10L_A A 6 L A 10 L 13 2 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 12 1_555 A DT 8 1_555 A DA 13 1_555 A DT 7 1_555 0.380 -0.871 3.103 4.693 -3.506 39.989 -0.881 -0.040 3.188 -5.093 -6.818 40.398 1 AA_DT5LDA8:DT7DT1L_AA A 5 L A 1 L A 8 ? A 7 ? 1 A DA 13 1_555 A DT 7 1_555 A DG 14 1_555 A DC 6 1_555 -0.247 -1.603 3.936 1.291 -4.994 21.221 -1.777 1.288 4.175 -13.308 -3.441 21.832 2 AA_DA8DG9:DC6DT7_AA A 8 ? A 7 ? A 9 ? A 6 ? 1 A DG 14 1_555 A DC 6 1_555 A DG 15 1_555 A DC 5 1_555 -0.079 -1.184 3.667 -3.054 2.401 31.512 -2.654 -0.477 3.561 4.399 5.597 31.744 3 AA_DG9DG10:DC5DC6_AA A 9 ? A 6 ? A 10 ? A 5 ? 1 A DG 15 1_555 A DC 5 1_555 A DA 16 1_555 A DT 4 1_555 1.534 -0.783 3.701 0.053 -9.066 35.921 0.183 -2.408 3.784 -14.419 -0.085 37.011 4 AA_DG10DA11:DT4DC5_AA A 10 ? A 5 ? A 11 ? A 4 ? 1 A DA 16 1_555 A DT 4 1_555 A DG 17 1_555 A DC 3 1_555 -0.767 -1.039 3.735 6.857 1.216 20.496 -3.298 5.035 3.243 3.297 -18.592 21.635 5 AA_DA11DG12:DC3DT4_AA A 11 ? A 4 ? A 12 ? A 3 ? 1 A DG 17 1_555 A DC 3 1_555 A DG 18 1_555 A DC 2 1_555 0.144 -1.087 3.212 -0.791 -0.052 35.850 -1.758 -0.345 3.209 -0.085 1.285 35.858 6 AA_DG12DG13:DC2DC3_AA A 12 ? A 3 ? A 13 ? A 2 ? 1 A DG 18 1_555 A DC 2 1_555 A DA 19 1_555 A DT 1 1_555 0.665 -1.058 3.634 1.640 9.509 35.191 -3.110 -0.819 3.275 15.374 -2.651 36.450 7 AA_DG13DA14:DT1DC2_AA A 13 ? A 2 ? A 14 ? A 1 ? 1 A DA 19 1_555 A DT 1 1_555 A DT 20 1_555 A DT 24 1_555 -0.115 -1.010 3.597 2.395 -1.420 -23.764 2.941 0.574 3.526 3.433 5.791 -23.925 8 AA_DA14DT6L:DT10LDT1_AA A 14 ? A 1 ? A 6 L A 10 L #