HEADER LIPID BINDING PROTEIN/IMMUNE SYSTEM 28-APR-26 13BR TITLE CRYO-EM STRUCTURE OF AZGP1-FAB COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ZINC-ALPHA-2-GLYCOPROTEIN; COMPND 11 CHAIN: A; COMPND 12 SYNONYM: ZN-ALPHA-2-GP,ZN-ALPHA-2-GLYCOPROTEIN; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: AZGP1, ZAG, ZNGP1; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS ADIPOKINE, SECRETED GLYCOPROTEIN, ANTIGEN ANTIBODY INTERACTION, ZINC KEYWDS 2 ALPHA2 GLYCOPROTEIN, LIPID BINDING PROTEIN, LIPID BINDING PROTEIN- KEYWDS 3 IMMUNE SYSTEM COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR E.MEDINA,J.S.JOSEPH,M.GOWDA,A.SHANEHSAZZADEH,P.PANWAR REVDAT 1 15-JUL-26 13BR 0 JRNL AUTH S.LEVINE,A.SHANEHSAZZADEH JRNL TITL CRYOEM STRUCTURE OF AZGP1-FAB COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, PHENIX, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.100 REMARK 3 NUMBER OF PARTICLES : 435000 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 13BR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAY-26. REMARK 100 THE DEPOSITION ID IS D_1000307546. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : AZGP1-FAB COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : TFS FALCON 4I (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 122.50 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO L 12 REMARK 465 VAL L 13 REMARK 465 THR L 14 REMARK 465 PRO L 15 REMARK 465 GLY L 16 REMARK 465 GLU L 17 REMARK 465 THR L 110 REMARK 465 VAL L 111 REMARK 465 ALA L 112 REMARK 465 ALA L 113 REMARK 465 PRO L 114 REMARK 465 SER L 115 REMARK 465 VAL L 116 REMARK 465 PHE L 117 REMARK 465 ILE L 118 REMARK 465 PHE L 119 REMARK 465 PRO L 120 REMARK 465 PRO L 121 REMARK 465 SER L 122 REMARK 465 ASP L 123 REMARK 465 GLU L 124 REMARK 465 GLN L 125 REMARK 465 LEU L 126 REMARK 465 LYS L 127 REMARK 465 SER L 128 REMARK 465 GLY L 129 REMARK 465 THR L 130 REMARK 465 ALA L 131 REMARK 465 SER L 132 REMARK 465 VAL L 133 REMARK 465 VAL L 134 REMARK 465 CYS L 135 REMARK 465 LEU L 136 REMARK 465 LEU L 137 REMARK 465 ASN L 138 REMARK 465 ASN L 139 REMARK 465 PHE L 140 REMARK 465 TYR L 141 REMARK 465 PRO L 142 REMARK 465 ARG L 143 REMARK 465 GLU L 144 REMARK 465 ALA L 145 REMARK 465 LYS L 146 REMARK 465 VAL L 147 REMARK 465 GLN L 148 REMARK 465 TRP L 149 REMARK 465 LYS L 150 REMARK 465 VAL L 151 REMARK 465 ASP L 152 REMARK 465 ASN L 153 REMARK 465 ALA L 154 REMARK 465 LEU L 155 REMARK 465 GLN L 156 REMARK 465 SER L 157 REMARK 465 GLY L 158 REMARK 465 ASN L 159 REMARK 465 SER L 160 REMARK 465 GLN L 161 REMARK 465 GLU L 162 REMARK 465 SER L 163 REMARK 465 VAL L 164 REMARK 465 THR L 165 REMARK 465 GLU L 166 REMARK 465 GLN L 167 REMARK 465 ASP L 168 REMARK 465 SER L 169 REMARK 465 LYS L 170 REMARK 465 ASP L 171 REMARK 465 SER L 172 REMARK 465 THR L 173 REMARK 465 TYR L 174 REMARK 465 SER L 175 REMARK 465 LEU L 176 REMARK 465 SER L 177 REMARK 465 SER L 178 REMARK 465 THR L 179 REMARK 465 LEU L 180 REMARK 465 THR L 181 REMARK 465 LEU L 182 REMARK 465 SER L 183 REMARK 465 LYS L 184 REMARK 465 ALA L 185 REMARK 465 ASP L 186 REMARK 465 TYR L 187 REMARK 465 GLU L 188 REMARK 465 LYS L 189 REMARK 465 HIS L 190 REMARK 465 LYS L 191 REMARK 465 VAL L 192 REMARK 465 TYR L 193 REMARK 465 ALA L 194 REMARK 465 CYS L 195 REMARK 465 GLU L 196 REMARK 465 VAL L 197 REMARK 465 THR L 198 REMARK 465 HIS L 199 REMARK 465 GLN L 200 REMARK 465 GLY L 201 REMARK 465 LEU L 202 REMARK 465 SER L 203 REMARK 465 SER L 204 REMARK 465 PRO L 205 REMARK 465 VAL L 206 REMARK 465 THR L 207 REMARK 465 LYS L 208 REMARK 465 SER L 209 REMARK 465 PHE L 210 REMARK 465 ASN L 211 REMARK 465 ARG L 212 REMARK 465 GLY L 213 REMARK 465 GLU L 214 REMARK 465 CYS L 215 REMARK 465 GLU H 1 REMARK 465 ALA H 123 REMARK 465 SER H 124 REMARK 465 THR H 125 REMARK 465 LYS H 126 REMARK 465 GLY H 127 REMARK 465 PRO H 128 REMARK 465 SER H 129 REMARK 465 VAL H 130 REMARK 465 PHE H 131 REMARK 465 PRO H 132 REMARK 465 LEU H 133 REMARK 465 ALA H 134 REMARK 465 PRO H 135 REMARK 465 SER H 136 REMARK 465 SER H 137 REMARK 465 LYS H 138 REMARK 465 SER H 139 REMARK 465 THR H 140 REMARK 465 SER H 141 REMARK 465 GLY H 142 REMARK 465 GLY H 143 REMARK 465 THR H 144 REMARK 465 ALA H 145 REMARK 465 ALA H 146 REMARK 465 LEU H 147 REMARK 465 GLY H 148 REMARK 465 CYS H 149 REMARK 465 LEU H 150 REMARK 465 VAL H 151 REMARK 465 LYS H 152 REMARK 465 ASP H 153 REMARK 465 TYR H 154 REMARK 465 PHE H 155 REMARK 465 PRO H 156 REMARK 465 GLU H 157 REMARK 465 PRO H 158 REMARK 465 VAL H 159 REMARK 465 THR H 160 REMARK 465 VAL H 161 REMARK 465 SER H 162 REMARK 465 TRP H 163 REMARK 465 ASN H 164 REMARK 465 SER H 165 REMARK 465 GLY H 166 REMARK 465 ALA H 167 REMARK 465 LEU H 168 REMARK 465 THR H 169 REMARK 465 SER H 170 REMARK 465 GLY H 171 REMARK 465 VAL H 172 REMARK 465 HIS H 173 REMARK 465 THR H 174 REMARK 465 PHE H 175 REMARK 465 PRO H 176 REMARK 465 ALA H 177 REMARK 465 VAL H 178 REMARK 465 LEU H 179 REMARK 465 GLN H 180 REMARK 465 SER H 181 REMARK 465 SER H 182 REMARK 465 GLY H 183 REMARK 465 LEU H 184 REMARK 465 TYR H 185 REMARK 465 SER H 186 REMARK 465 LEU H 187 REMARK 465 SER H 188 REMARK 465 SER H 189 REMARK 465 VAL H 190 REMARK 465 VAL H 191 REMARK 465 THR H 192 REMARK 465 VAL H 193 REMARK 465 PRO H 194 REMARK 465 SER H 195 REMARK 465 SER H 196 REMARK 465 SER H 197 REMARK 465 LEU H 198 REMARK 465 GLY H 199 REMARK 465 THR H 200 REMARK 465 GLN H 201 REMARK 465 THR H 202 REMARK 465 TYR H 203 REMARK 465 ILE H 204 REMARK 465 CYS H 205 REMARK 465 ASN H 206 REMARK 465 VAL H 207 REMARK 465 ASN H 208 REMARK 465 HIS H 209 REMARK 465 LYS H 210 REMARK 465 PRO H 211 REMARK 465 SER H 212 REMARK 465 ASN H 213 REMARK 465 THR H 214 REMARK 465 LYS H 215 REMARK 465 VAL H 216 REMARK 465 ASP H 217 REMARK 465 LYS H 218 REMARK 465 LYS H 219 REMARK 465 VAL H 220 REMARK 465 GLU H 221 REMARK 465 PRO H 222 REMARK 465 LYS H 223 REMARK 465 SER H 224 REMARK 465 CYS H 225 REMARK 465 ASP H 226 REMARK 465 LYS H 227 REMARK 465 THR H 228 REMARK 465 HIS H 229 REMARK 465 THR H 230 REMARK 465 GLY H 231 REMARK 465 SER H 232 REMARK 465 GLY H 233 REMARK 465 SER H 234 REMARK 465 ASP H 235 REMARK 465 TYR H 236 REMARK 465 LYS H 237 REMARK 465 ASP H 238 REMARK 465 ASP H 239 REMARK 465 ASP H 240 REMARK 465 ASP H 241 REMARK 465 LYS H 242 REMARK 465 GLN A 1 REMARK 465 GLU A 2 REMARK 465 ASN A 3 REMARK 465 GLN A 4 REMARK 465 SER A 18 REMARK 465 LYS A 19 REMARK 465 HIS A 20 REMARK 465 VAL A 21 REMARK 465 GLU A 22 REMARK 465 ASP A 23 REMARK 465 VAL A 24 REMARK 465 GLY A 121 REMARK 465 LYS A 122 REMARK 465 LYS A 129 REMARK 465 GLU A 130 REMARK 465 ILE A 131 REMARK 465 PRO A 132 REMARK 465 LYS A 178 REMARK 465 ASN A 179 REMARK 465 ILE A 180 REMARK 465 LEU A 181 REMARK 465 ASP A 182 REMARK 465 ARG A 183 REMARK 465 GLN A 184 REMARK 465 ASP A 185 REMARK 465 PRO A 186 REMARK 465 PRO A 187 REMARK 465 SER A 188 REMARK 465 VAL A 189 REMARK 465 VAL A 190 REMARK 465 VAL A 191 REMARK 465 THR A 192 REMARK 465 SER A 193 REMARK 465 HIS A 194 REMARK 465 GLN A 195 REMARK 465 ALA A 196 REMARK 465 PRO A 197 REMARK 465 GLY A 198 REMARK 465 GLU A 199 REMARK 465 LYS A 200 REMARK 465 LYS A 201 REMARK 465 LYS A 202 REMARK 465 LEU A 203 REMARK 465 LYS A 204 REMARK 465 CYS A 205 REMARK 465 LEU A 206 REMARK 465 ALA A 207 REMARK 465 TYR A 208 REMARK 465 ASP A 209 REMARK 465 PHE A 210 REMARK 465 TYR A 211 REMARK 465 PRO A 212 REMARK 465 GLY A 213 REMARK 465 LYS A 214 REMARK 465 ILE A 215 REMARK 465 ASP A 216 REMARK 465 VAL A 217 REMARK 465 HIS A 218 REMARK 465 TRP A 219 REMARK 465 THR A 220 REMARK 465 ARG A 221 REMARK 465 ALA A 222 REMARK 465 GLY A 223 REMARK 465 GLU A 224 REMARK 465 VAL A 225 REMARK 465 GLN A 226 REMARK 465 GLU A 227 REMARK 465 PRO A 228 REMARK 465 GLU A 229 REMARK 465 LEU A 230 REMARK 465 ARG A 231 REMARK 465 GLY A 232 REMARK 465 ASP A 233 REMARK 465 VAL A 234 REMARK 465 LEU A 235 REMARK 465 HIS A 236 REMARK 465 ASN A 237 REMARK 465 GLY A 238 REMARK 465 ASN A 239 REMARK 465 GLY A 240 REMARK 465 THR A 241 REMARK 465 TYR A 242 REMARK 465 GLN A 243 REMARK 465 SER A 244 REMARK 465 TRP A 245 REMARK 465 VAL A 246 REMARK 465 VAL A 247 REMARK 465 VAL A 248 REMARK 465 ALA A 249 REMARK 465 VAL A 250 REMARK 465 PRO A 251 REMARK 465 PRO A 252 REMARK 465 GLN A 253 REMARK 465 ASP A 254 REMARK 465 THR A 255 REMARK 465 ALA A 256 REMARK 465 PRO A 257 REMARK 465 TYR A 258 REMARK 465 SER A 259 REMARK 465 CYS A 260 REMARK 465 HIS A 261 REMARK 465 VAL A 262 REMARK 465 GLN A 263 REMARK 465 HIS A 264 REMARK 465 SER A 265 REMARK 465 SER A 266 REMARK 465 LEU A 267 REMARK 465 ALA A 268 REMARK 465 GLN A 269 REMARK 465 PRO A 270 REMARK 465 LEU A 271 REMARK 465 VAL A 272 REMARK 465 VAL A 273 REMARK 465 PRO A 274 REMARK 465 TRP A 275 REMARK 465 GLU A 276 REMARK 465 ALA A 277 REMARK 465 SER A 278 REMARK 465 HIS A 279 REMARK 465 HIS A 280 REMARK 465 HIS A 281 REMARK 465 HIS A 282 REMARK 465 HIS A 283 REMARK 465 HIS A 284 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS L 40 CG CD CE NZ REMARK 470 ARG L 55 CG CD NE CZ NH1 NH2 REMARK 470 ASP L 61 CG OD1 OD2 REMARK 470 ARG L 62 CG CD NE CZ NH1 NH2 REMARK 470 LYS L 75 CG CD CE NZ REMARK 470 ARG L 78 CG CD NE CZ NH1 NH2 REMARK 470 GLU L 80 CG CD OE1 OE2 REMARK 470 LYS L 104 CG CD CE NZ REMARK 470 GLU L 106 CG CD OE1 OE2 REMARK 470 LYS L 108 CG CD CE NZ REMARK 470 LYS H 43 CG CD CE NZ REMARK 470 ASP H 62 CG OD1 OD2 REMARK 470 LYS H 76 CG CD CE NZ REMARK 470 ARG A 7 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 28 CG CD OE1 NE2 REMARK 470 LYS A 44 CG CD CE NZ REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 GLN A 56 CG CD OE1 NE2 REMARK 470 GLU A 58 CG CD OE1 OE2 REMARK 470 GLU A 61 CG CD OE1 OE2 REMARK 470 ASP A 62 CG OD1 OD2 REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 GLN A 98 CG CD OE1 NE2 REMARK 470 ARG A 100 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 106 CG CD OE1 OE2 REMARK 470 ARG A 109 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER L 26 -146.09 56.00 REMARK 500 ILE L 29 71.38 57.52 REMARK 500 LYS L 40 -179.85 -67.17 REMARK 500 ALA L 52 -5.19 67.08 REMARK 500 LEU L 105 35.45 -99.80 REMARK 500 GLN H 3 -97.24 52.94 REMARK 500 VAL H 48 -62.41 -121.83 REMARK 500 SER H 63 -1.11 65.59 REMARK 500 ALA H 88 -3.85 68.03 REMARK 500 THR H 91 47.19 38.48 REMARK 500 ASN A 34 -118.59 56.95 REMARK 500 ASN A 89 -96.53 -63.74 REMARK 500 GLU A 149 35.87 -99.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR L 95 PRO L 96 129.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-76947 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF AZGP1-FAB COMPLEX DBREF 13BR L 1 215 PDB 13BR 13BR 1 215 DBREF 13BR H 1 242 PDB 13BR 13BR 1 242 DBREF 13BR A 1 278 UNP P25311 ZA2G_HUMAN 21 298 SEQADV 13BR HIS A 279 UNP P25311 EXPRESSION TAG SEQADV 13BR HIS A 280 UNP P25311 EXPRESSION TAG SEQADV 13BR HIS A 281 UNP P25311 EXPRESSION TAG SEQADV 13BR HIS A 282 UNP P25311 EXPRESSION TAG SEQADV 13BR HIS A 283 UNP P25311 EXPRESSION TAG SEQADV 13BR HIS A 284 UNP P25311 EXPRESSION TAG SEQRES 1 L 215 ASP ILE VAL MET THR GLN SER PRO LEU SER LEU PRO VAL SEQRES 2 L 215 THR PRO GLY GLU PRO ALA SER ILE SER CYS ARG SER SER SEQRES 3 L 215 GLN SER ILE PRO TYR ASN LEU LEU ASP TRP TYR LEU GLN SEQRES 4 L 215 LYS SER GLY GLN SER PRO GLN LEU LEU ILE TYR LEU ALA SEQRES 5 L 215 SER ASN ARG ALA SER GLY VAL PRO ASP ARG PHE SER GLY SEQRES 6 L 215 SER GLY SER GLY THR ASP PHE THR LEU LYS ILE SER ARG SEQRES 7 L 215 VAL GLU ALA GLU ASP VAL GLY PHE TYR TYR CYS MET GLN SEQRES 8 L 215 GLY LEU GLU THR PRO LEU THR PHE GLY GLN GLY THR LYS SEQRES 9 L 215 LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 H 242 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU GLU GLN SEQRES 2 H 242 PRO GLY GLY SER LEU ARG LEU SER CYS ALA GLY SER GLY SEQRES 3 H 242 PHE THR PHE SER SER TYR GLY MET THR TRP VAL ARG GLN SEQRES 4 H 242 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER SER ILE SER SEQRES 5 H 242 SER SER GLY TYR TYR THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 H 242 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 H 242 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 242 ALA VAL TYR TYR CYS ALA ARG ASP LEU GLY THR LEU LEU SEQRES 9 H 242 GLY SER LEU GLY MET ASP VAL TRP GLY GLN GLY THR THR SEQRES 10 H 242 VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL SEQRES 11 H 242 PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY SEQRES 12 H 242 THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO SEQRES 13 H 242 GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SEQRES 14 H 242 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER SEQRES 15 H 242 GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SEQRES 16 H 242 SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN SEQRES 17 H 242 HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU SEQRES 18 H 242 PRO LYS SER CYS ASP LYS THR HIS THR GLY SER GLY SER SEQRES 19 H 242 ASP TYR LYS ASP ASP ASP ASP LYS SEQRES 1 A 284 GLN GLU ASN GLN ASP GLY ARG TYR SER LEU THR TYR ILE SEQRES 2 A 284 TYR THR GLY LEU SER LYS HIS VAL GLU ASP VAL PRO ALA SEQRES 3 A 284 PHE GLN ALA LEU GLY SER LEU ASN ASP LEU GLN PHE PHE SEQRES 4 A 284 ARG TYR ASN SER LYS ASP ARG LYS SER GLN PRO MET GLY SEQRES 5 A 284 LEU TRP ARG GLN VAL GLU GLY MET GLU ASP TRP LYS GLN SEQRES 6 A 284 ASP SER GLN LEU GLN LYS ALA ARG GLU ASP ILE PHE MET SEQRES 7 A 284 GLU THR LEU LYS ASP ILE VAL GLU TYR TYR ASN ASP SER SEQRES 8 A 284 ASN GLY SER HIS VAL LEU GLN GLY ARG PHE GLY CYS GLU SEQRES 9 A 284 ILE GLU ASN ASN ARG SER SER GLY ALA PHE TRP LYS TYR SEQRES 10 A 284 TYR TYR ASP GLY LYS ASP TYR ILE GLU PHE ASN LYS GLU SEQRES 11 A 284 ILE PRO ALA TRP VAL PRO PHE ASP PRO ALA ALA GLN ILE SEQRES 12 A 284 THR LYS GLN LYS TRP GLU ALA GLU PRO VAL TYR VAL GLN SEQRES 13 A 284 ARG ALA LYS ALA TYR LEU GLU GLU GLU CYS PRO ALA THR SEQRES 14 A 284 LEU ARG LYS TYR LEU LYS TYR SER LYS ASN ILE LEU ASP SEQRES 15 A 284 ARG GLN ASP PRO PRO SER VAL VAL VAL THR SER HIS GLN SEQRES 16 A 284 ALA PRO GLY GLU LYS LYS LYS LEU LYS CYS LEU ALA TYR SEQRES 17 A 284 ASP PHE TYR PRO GLY LYS ILE ASP VAL HIS TRP THR ARG SEQRES 18 A 284 ALA GLY GLU VAL GLN GLU PRO GLU LEU ARG GLY ASP VAL SEQRES 19 A 284 LEU HIS ASN GLY ASN GLY THR TYR GLN SER TRP VAL VAL SEQRES 20 A 284 VAL ALA VAL PRO PRO GLN ASP THR ALA PRO TYR SER CYS SEQRES 21 A 284 HIS VAL GLN HIS SER SER LEU ALA GLN PRO LEU VAL VAL SEQRES 22 A 284 PRO TRP GLU ALA SER HIS HIS HIS HIS HIS HIS HELIX 1 AA1 THR H 28 TYR H 32 5 5 HELIX 2 AA2 MET A 51 ARG A 55 5 5 HELIX 3 AA3 ASP A 62 TYR A 88 1 27 HELIX 4 AA4 ASP A 138 GLU A 149 1 12 HELIX 5 AA5 GLU A 151 GLU A 164 1 14 HELIX 6 AA6 GLU A 164 SER A 177 1 14 SHEET 1 AA1 2 THR L 5 GLN L 6 0 SHEET 2 AA1 2 CYS L 23 ARG L 24 -1 O ARG L 24 N THR L 5 SHEET 1 AA2 3 LEU L 47 ILE L 49 0 SHEET 2 AA2 3 LEU L 34 TYR L 37 -1 N TRP L 36 O LEU L 48 SHEET 3 AA2 3 TYR L 88 GLN L 91 -1 O TYR L 88 N TYR L 37 SHEET 1 AA3 2 GLY L 65 GLY L 67 0 SHEET 2 AA3 2 PHE L 72 LEU L 74 -1 O THR L 73 N SER L 66 SHEET 1 AA4 4 GLU H 6 SER H 7 0 SHEET 2 AA4 4 ARG H 19 CYS H 22 -1 O SER H 21 N SER H 7 SHEET 3 AA4 4 THR H 78 MET H 83 -1 O LEU H 79 N CYS H 22 SHEET 4 AA4 4 PHE H 68 ASP H 73 -1 N SER H 71 O TYR H 80 SHEET 1 AA5 5 THR H 58 TYR H 60 0 SHEET 2 AA5 5 LEU H 45 ILE H 51 -1 N SER H 50 O TYR H 59 SHEET 3 AA5 5 GLY H 33 GLN H 39 -1 N TRP H 36 O SER H 49 SHEET 4 AA5 5 VAL H 93 ASP H 99 -1 O ASP H 99 N GLY H 33 SHEET 5 AA5 5 MET H 109 TRP H 112 -1 O VAL H 111 N ARG H 98 SHEET 1 AA6 5 THR H 58 TYR H 60 0 SHEET 2 AA6 5 LEU H 45 ILE H 51 -1 N SER H 50 O TYR H 59 SHEET 3 AA6 5 GLY H 33 GLN H 39 -1 N TRP H 36 O SER H 49 SHEET 4 AA6 5 VAL H 93 ASP H 99 -1 O ASP H 99 N GLY H 33 SHEET 5 AA6 5 THR H 116 THR H 117 -1 O THR H 116 N TYR H 94 SHEET 1 AA7 6 SER A 48 GLN A 49 0 SHEET 2 AA7 6 LEU A 36 TYR A 41 -1 N ARG A 40 O GLN A 49 SHEET 3 AA7 6 PHE A 27 LEU A 33 -1 N LEU A 33 O LEU A 36 SHEET 4 AA7 6 TYR A 8 GLY A 16 -1 N THR A 11 O SER A 32 SHEET 5 AA7 6 ARG A 100 ILE A 105 -1 O PHE A 101 N TYR A 12 SHEET 6 AA7 6 SER A 110 LYS A 116 -1 O LYS A 116 N ARG A 100 SHEET 1 AA8 2 ILE A 125 GLU A 126 0 SHEET 2 AA8 2 VAL A 135 PRO A 136 -1 O VAL A 135 N GLU A 126 SSBOND 1 CYS L 23 CYS L 89 1555 1555 2.03 SSBOND 2 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 3 CYS A 103 CYS A 166 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 120 605 CONECT 605 120 CONECT 894 1467 CONECT 1467 894 CONECT 2363 2843 CONECT 2843 2363 MASTER 536 0 0 6 29 0 0 6 2935 3 6 58 END