data_13DO # _entry.id 13DO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.417 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 13DO pdb_000013do 10.2210/pdb13do/pdb WWPDB D_1000307737 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-10-28 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 13DO _pdbx_database_status.recvd_initial_deposition_date 2026-05-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email andyn@uic.edu _pdbx_contact_author.name_first Andy _pdbx_contact_author.name_last Nguyen _pdbx_contact_author.name_mi I _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4137-6453 # _audit_author.name 'Ganatra, P.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-5836-6772 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Porous Framework Assembly Creates Functional Tertiary Folds in Small Peptides' _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ganatra, P.' 1 0000-0002-5836-6772 primary 'Wang, D.F.' 2 0009-0003-8171-6069 primary 'Nichols, S.' 3 ? primary 'Dang, V.T.' 4 ? primary 'Brunzelle, J.S.' 5 ? primary 'Jana, P.' 6 ? primary 'Nguyen, A.I.' 7 0000-0003-4137-6453 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn HelloB-GGFFAA-A6Dap-PFHpA 1797.128 1 ? ? ? ? 2 non-polymer syn 'perfluoroheptanoic acid' 364.061 1 ? ? ? ? 3 water nat water 18.015 3 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(Z7Z)A(AIB)L(AIB)(DPP)(AIB)L(AIB)Q(AIB)LGGFFAA(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XAALAAALAQALGGFFAAX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'perfluoroheptanoic acid' 4EI 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 Z7Z n 1 2 ALA n 1 3 AIB n 1 4 LEU n 1 5 AIB n 1 6 DPP n 1 7 AIB n 1 8 LEU n 1 9 AIB n 1 10 GLN n 1 11 AIB n 1 12 LEU n 1 13 GLY n 1 14 GLY n 1 15 PHE n 1 16 PHE n 1 17 ALA n 1 18 ALA n 1 19 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 19 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4EI non-polymer . 'perfluoroheptanoic acid' ? 'C7 H F13 O2' 364.061 AIB 'L-peptide linking' n 'ALPHA-AMINOISOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 DPP 'L-peptide linking' n 'DIAMINOPROPANOIC ACID' ? 'C3 H8 N2 O2' 104.108 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 Z7Z non-polymer . 'biphenyl-4-carboxylic acid' ? 'C13 H10 O2' 198.217 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 Z7Z 1 1 1 Z7Z BIF A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 AIB 3 3 3 AIB AIB A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 AIB 5 5 5 AIB AIB A . n A 1 6 DPP 6 6 6 DPP DPP A . n A 1 7 AIB 7 7 7 AIB AIB A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 AIB 9 9 9 AIB AIB A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 AIB 11 11 11 AIB AIB A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 NH2 19 19 19 NH2 NH2 A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 4EI _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 4EI _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4EI 1 101 1 4EI C7A A . C 3 HOH 1 201 1 HOH HOH A . C 3 HOH 2 202 2 HOH HOH A . C 3 HOH 3 203 3 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 110.100 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 13DO _cell.details ? _cell.formula_units_Z ? _cell.length_a 37.836 _cell.length_a_esd ? _cell.length_b 9.154 _cell.length_b_esd ? _cell.length_c 36.495 _cell.length_c_esd ? _cell.volume 11870.217 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 13DO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 13DO _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.65 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 25.51 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'SLOW COOLING' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Acetonitrile, water' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 298 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2026-04-08 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978720 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-G' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.978720 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-G _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 10.18 _reflns.entry_id 13DO _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.14 _reflns.d_resolution_low 18.6 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 4559 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.10 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.7 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.35 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.14 _reflns_shell.d_res_low 1.181 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 422 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.992 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 27.75 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 13DO _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.14 _refine.ls_d_res_low 18.60 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 4559 _refine.ls_number_reflns_R_free 819 _refine.ls_number_reflns_R_work 7417 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.50 _refine.ls_percent_reflns_R_free 9.94 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1710 _refine.ls_R_factor_R_free 0.2129 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1665 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 31.8962 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.0470 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.14 _refine_hist.d_res_low 18.60 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 154 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 128 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0067 ? 204 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 1.3685 ? 305 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.0751 ? 15 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.0062 ? 30 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 44.6116 ? 39 ? f_dihedral_angle_d ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.14 1.21 . . 129 1176 95.96 . . . . 0.1675 . . . . . . . . . . . . . . . 0.2176 'X-RAY DIFFRACTION' 1.21 1.31 . . 144 1294 99.17 . . . . 0.1473 . . . . . . . . . . . . . . . 0.2077 'X-RAY DIFFRACTION' 1.31 1.44 . . 133 1190 98.95 . . . . 0.1957 . . . . . . . . . . . . . . . 0.2171 'X-RAY DIFFRACTION' 1.44 1.64 . . 140 1245 98.51 . . . . 0.1759 . . . . . . . . . . . . . . . 0.1949 'X-RAY DIFFRACTION' 1.64 2.07 . . 135 1251 99.14 . . . . 0.1638 . . . . . . . . . . . . . . . 0.1919 'X-RAY DIFFRACTION' 2.07 18.60 . . 138 1261 99.36 . . . . 0.1635 . . . . . . . . . . . . . . . 0.2267 # _struct.entry_id 13DO _struct.title helloB-GGFFAA-A6Dpp+PFHpA _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 13DO _struct_keywords.text 'synthetic construct, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 13DO _struct_ref.pdbx_db_accession 13DO _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 13DO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 19 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 13DO _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 19 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 19 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id ALA _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 2 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LEU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 12 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ALA _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 2 _struct_conf.end_auth_comp_id LEU _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 12 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A Z7Z 1 C1 A ? ? 1_555 A ALA 2 N ? ? A Z7Z 1 A ALA 2 1_555 ? ? ? ? ? ? ? 1.427 ? ? covale2 covale both ? A Z7Z 1 C1 B ? ? 1_555 A ALA 2 N ? ? A Z7Z 1 A ALA 2 1_555 ? ? ? ? ? ? ? 1.428 ? ? covale3 covale both ? A ALA 2 C ? ? ? 1_555 A AIB 3 N ? ? A ALA 2 A AIB 3 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale4 covale both ? A AIB 3 C ? ? ? 1_555 A LEU 4 N ? ? A AIB 3 A LEU 4 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? A LEU 4 C ? ? ? 1_555 A AIB 5 N ? ? A LEU 4 A AIB 5 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale6 covale both ? A AIB 5 C ? ? ? 1_555 A DPP 6 N A ? A AIB 5 A DPP 6 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale7 covale both ? A AIB 5 C ? ? ? 1_555 A DPP 6 N B ? A AIB 5 A DPP 6 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale8 covale both ? A DPP 6 C A ? ? 1_555 A AIB 7 N ? ? A DPP 6 A AIB 7 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale9 covale both ? A DPP 6 C B ? ? 1_555 A AIB 7 N ? ? A DPP 6 A AIB 7 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale10 covale both ? A AIB 7 C ? ? ? 1_555 A LEU 8 N ? ? A AIB 7 A LEU 8 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale11 covale both ? A LEU 8 C ? ? ? 1_555 A AIB 9 N ? ? A LEU 8 A AIB 9 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale12 covale both ? A AIB 9 C ? ? ? 1_555 A GLN 10 N A ? A AIB 9 A GLN 10 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale13 covale both ? A AIB 9 C ? ? ? 1_555 A GLN 10 N B ? A AIB 9 A GLN 10 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale14 covale both ? A GLN 10 C A ? ? 1_555 A AIB 11 N ? ? A GLN 10 A AIB 11 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale15 covale both ? A GLN 10 C B ? ? 1_555 A AIB 11 N ? ? A GLN 10 A AIB 11 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale16 covale both ? A AIB 11 C ? ? ? 1_555 A LEU 12 N ? ? A AIB 11 A LEU 12 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale17 covale both ? A ALA 18 C ? ? ? 1_555 A NH2 19 N ? ? A ALA 18 A NH2 19 1_555 ? ? ? ? ? ? ? 1.430 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 AIB A 3 ? . . . . AIB A 3 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 2 AIB A 5 ? . . . . AIB A 5 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 3 DPP A 6 A . . . . DPP A 6 ? 1_555 . . . . . . . ALA 1 DPP Amination 'Named protein modification' 4 DPP A 6 B . . . . DPP A 6 ? 1_555 . . . . . . . ALA 1 DPP Amination 'Named protein modification' 5 AIB A 7 ? . . . . AIB A 7 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 6 AIB A 9 ? . . . . AIB A 9 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 7 AIB A 11 ? . . . . AIB A 11 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 8 Z7Z A 1 A . . . . Z7Z A 1 ? 1_555 . . . . . . . ? 1 Z7Z None 'Non-standard residue' 9 Z7Z A 1 B . . . . Z7Z A 1 ? 1_555 . . . . . . . ? 1 Z7Z None 'Non-standard residue' 10 NH2 A 19 ? ALA A 18 ? NH2 A 19 ? 1_555 ALA A 18 ? 1_555 . . ALA 1 NH2 None 'Terminal amidation' # _pdbx_entry_details.entry_id 13DO _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y,-z 3 x+1/2,y+1/2,z 4 -x+1/2,y+1/2,-z # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 4EI C5 C N N 1 4EI C6 C N N 2 4EI C7 C N N 3 4EI C1 C N N 4 4EI C2 C N N 5 4EI C3 C N N 6 4EI F73 F N N 7 4EI F71 F N N 8 4EI F72 F N N 9 4EI F61 F N N 10 4EI F62 F N N 11 4EI F51 F N N 12 4EI F52 F N N 13 4EI C4 C N N 14 4EI F41 F N N 15 4EI F42 F N N 16 4EI F31 F N N 17 4EI F32 F N N 18 4EI F21 F N N 19 4EI F22 F N N 20 4EI O1 O N N 21 4EI O2 O N N 22 4EI H1 H N N 23 AIB N N N N 24 AIB CA C N N 25 AIB C C N N 26 AIB O O N N 27 AIB OXT O N N 28 AIB CB1 C N N 29 AIB CB2 C N N 30 AIB H H N N 31 AIB H2 H N N 32 AIB HXT H N N 33 AIB HB11 H N N 34 AIB HB12 H N N 35 AIB HB13 H N N 36 AIB HB21 H N N 37 AIB HB22 H N N 38 AIB HB23 H N N 39 ALA N N N N 40 ALA CA C N S 41 ALA C C N N 42 ALA O O N N 43 ALA CB C N N 44 ALA OXT O N N 45 ALA H H N N 46 ALA H2 H N N 47 ALA HA H N N 48 ALA HB1 H N N 49 ALA HB2 H N N 50 ALA HB3 H N N 51 ALA HXT H N N 52 DPP N N N N 53 DPP CA C N S 54 DPP C C N N 55 DPP O O N N 56 DPP CB C N N 57 DPP NG N N N 58 DPP OXT O N N 59 DPP H H N N 60 DPP H2 H N N 61 DPP HA H N N 62 DPP HB2 H N N 63 DPP HB3 H N N 64 DPP HG1 H N N 65 DPP HG2 H N N 66 DPP HXT H N N 67 GLN N N N N 68 GLN CA C N S 69 GLN C C N N 70 GLN O O N N 71 GLN CB C N N 72 GLN CG C N N 73 GLN CD C N N 74 GLN OE1 O N N 75 GLN NE2 N N N 76 GLN OXT O N N 77 GLN H H N N 78 GLN H2 H N N 79 GLN HA H N N 80 GLN HB2 H N N 81 GLN HB3 H N N 82 GLN HG2 H N N 83 GLN HG3 H N N 84 GLN HE21 H N N 85 GLN HE22 H N N 86 GLN HXT H N N 87 GLY N N N N 88 GLY CA C N N 89 GLY C C N N 90 GLY O O N N 91 GLY OXT O N N 92 GLY H H N N 93 GLY H2 H N N 94 GLY HA2 H N N 95 GLY HA3 H N N 96 GLY HXT H N N 97 HOH O O N N 98 HOH H1 H N N 99 HOH H2 H N N 100 LEU N N N N 101 LEU CA C N S 102 LEU C C N N 103 LEU O O N N 104 LEU CB C N N 105 LEU CG C N N 106 LEU CD1 C N N 107 LEU CD2 C N N 108 LEU OXT O N N 109 LEU H H N N 110 LEU H2 H N N 111 LEU HA H N N 112 LEU HB2 H N N 113 LEU HB3 H N N 114 LEU HG H N N 115 LEU HD11 H N N 116 LEU HD12 H N N 117 LEU HD13 H N N 118 LEU HD21 H N N 119 LEU HD22 H N N 120 LEU HD23 H N N 121 LEU HXT H N N 122 NH2 N N N N 123 NH2 HN1 H N N 124 NH2 HN2 H N N 125 PHE N N N N 126 PHE CA C N S 127 PHE C C N N 128 PHE O O N N 129 PHE CB C N N 130 PHE CG C Y N 131 PHE CD1 C Y N 132 PHE CD2 C Y N 133 PHE CE1 C Y N 134 PHE CE2 C Y N 135 PHE CZ C Y N 136 PHE OXT O N N 137 PHE H H N N 138 PHE H2 H N N 139 PHE HA H N N 140 PHE HB2 H N N 141 PHE HB3 H N N 142 PHE HD1 H N N 143 PHE HD2 H N N 144 PHE HE1 H N N 145 PHE HE2 H N N 146 PHE HZ H N N 147 PHE HXT H N N 148 Z7Z O1 O N N 149 Z7Z C1 C N N 150 Z7Z O2 O N N 151 Z7Z C2 C Y N 152 Z7Z C3 C Y N 153 Z7Z C4 C Y N 154 Z7Z C5 C Y N 155 Z7Z C6 C Y N 156 Z7Z C7 C Y N 157 Z7Z C8 C Y N 158 Z7Z C9 C Y N 159 Z7Z C10 C Y N 160 Z7Z C11 C Y N 161 Z7Z C12 C Y N 162 Z7Z C13 C Y N 163 Z7Z H1O H N N 164 Z7Z H31 H N N 165 Z7Z H41 H N N 166 Z7Z H51 H N N 167 Z7Z H61 H N N 168 Z7Z H91 H N N 169 Z7Z H101 H N N 170 Z7Z H111 H N N 171 Z7Z H121 H N N 172 Z7Z H131 H N N 173 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4EI F62 C6 sing N N 1 4EI F72 C7 sing N N 2 4EI F61 C6 sing N N 3 4EI C6 C7 sing N N 4 4EI C6 C5 sing N N 5 4EI C7 F71 sing N N 6 4EI C7 F73 sing N N 7 4EI F51 C5 sing N N 8 4EI F41 C4 sing N N 9 4EI C5 C4 sing N N 10 4EI C5 F52 sing N N 11 4EI C4 F42 sing N N 12 4EI C4 C3 sing N N 13 4EI F32 C3 sing N N 14 4EI C3 F31 sing N N 15 4EI C3 C2 sing N N 16 4EI F21 C2 sing N N 17 4EI C2 C1 sing N N 18 4EI C2 F22 sing N N 19 4EI C1 O1 doub N N 20 4EI C1 O2 sing N N 21 4EI O2 H1 sing N N 22 AIB N CA sing N N 23 AIB N H sing N N 24 AIB N H2 sing N N 25 AIB CA C sing N N 26 AIB CA CB1 sing N N 27 AIB CA CB2 sing N N 28 AIB C O doub N N 29 AIB C OXT sing N N 30 AIB OXT HXT sing N N 31 AIB CB1 HB11 sing N N 32 AIB CB1 HB12 sing N N 33 AIB CB1 HB13 sing N N 34 AIB CB2 HB21 sing N N 35 AIB CB2 HB22 sing N N 36 AIB CB2 HB23 sing N N 37 ALA N CA sing N N 38 ALA N H sing N N 39 ALA N H2 sing N N 40 ALA CA C sing N N 41 ALA CA CB sing N N 42 ALA CA HA sing N N 43 ALA C O doub N N 44 ALA C OXT sing N N 45 ALA CB HB1 sing N N 46 ALA CB HB2 sing N N 47 ALA CB HB3 sing N N 48 ALA OXT HXT sing N N 49 DPP N CA sing N N 50 DPP N H sing N N 51 DPP N H2 sing N N 52 DPP CA C sing N N 53 DPP CA CB sing N N 54 DPP CA HA sing N N 55 DPP C O doub N N 56 DPP C OXT sing N N 57 DPP CB NG sing N N 58 DPP CB HB2 sing N N 59 DPP CB HB3 sing N N 60 DPP NG HG1 sing N N 61 DPP NG HG2 sing N N 62 DPP OXT HXT sing N N 63 GLN N CA sing N N 64 GLN N H sing N N 65 GLN N H2 sing N N 66 GLN CA C sing N N 67 GLN CA CB sing N N 68 GLN CA HA sing N N 69 GLN C O doub N N 70 GLN C OXT sing N N 71 GLN CB CG sing N N 72 GLN CB HB2 sing N N 73 GLN CB HB3 sing N N 74 GLN CG CD sing N N 75 GLN CG HG2 sing N N 76 GLN CG HG3 sing N N 77 GLN CD OE1 doub N N 78 GLN CD NE2 sing N N 79 GLN NE2 HE21 sing N N 80 GLN NE2 HE22 sing N N 81 GLN OXT HXT sing N N 82 GLY N CA sing N N 83 GLY N H sing N N 84 GLY N H2 sing N N 85 GLY CA C sing N N 86 GLY CA HA2 sing N N 87 GLY CA HA3 sing N N 88 GLY C O doub N N 89 GLY C OXT sing N N 90 GLY OXT HXT sing N N 91 HOH O H1 sing N N 92 HOH O H2 sing N N 93 LEU N CA sing N N 94 LEU N H sing N N 95 LEU N H2 sing N N 96 LEU CA C sing N N 97 LEU CA CB sing N N 98 LEU CA HA sing N N 99 LEU C O doub N N 100 LEU C OXT sing N N 101 LEU CB CG sing N N 102 LEU CB HB2 sing N N 103 LEU CB HB3 sing N N 104 LEU CG CD1 sing N N 105 LEU CG CD2 sing N N 106 LEU CG HG sing N N 107 LEU CD1 HD11 sing N N 108 LEU CD1 HD12 sing N N 109 LEU CD1 HD13 sing N N 110 LEU CD2 HD21 sing N N 111 LEU CD2 HD22 sing N N 112 LEU CD2 HD23 sing N N 113 LEU OXT HXT sing N N 114 NH2 N HN1 sing N N 115 NH2 N HN2 sing N N 116 PHE N CA sing N N 117 PHE N H sing N N 118 PHE N H2 sing N N 119 PHE CA C sing N N 120 PHE CA CB sing N N 121 PHE CA HA sing N N 122 PHE C O doub N N 123 PHE C OXT sing N N 124 PHE CB CG sing N N 125 PHE CB HB2 sing N N 126 PHE CB HB3 sing N N 127 PHE CG CD1 doub Y N 128 PHE CG CD2 sing Y N 129 PHE CD1 CE1 sing Y N 130 PHE CD1 HD1 sing N N 131 PHE CD2 CE2 doub Y N 132 PHE CD2 HD2 sing N N 133 PHE CE1 CZ doub Y N 134 PHE CE1 HE1 sing N N 135 PHE CE2 CZ sing Y N 136 PHE CE2 HE2 sing N N 137 PHE CZ HZ sing N N 138 PHE OXT HXT sing N N 139 Z7Z O1 C1 sing N N 140 Z7Z O1 H1O sing N N 141 Z7Z C1 O2 doub N N 142 Z7Z C1 C2 sing N N 143 Z7Z C2 C3 doub Y N 144 Z7Z C2 C5 sing Y N 145 Z7Z C3 C4 sing Y N 146 Z7Z C3 H31 sing N N 147 Z7Z C4 C7 doub Y N 148 Z7Z C4 H41 sing N N 149 Z7Z C5 C6 doub Y N 150 Z7Z C5 H51 sing N N 151 Z7Z C6 C7 sing Y N 152 Z7Z C6 H61 sing N N 153 Z7Z C7 C8 sing N N 154 Z7Z C8 C9 doub Y N 155 Z7Z C8 C10 sing Y N 156 Z7Z C9 C11 sing Y N 157 Z7Z C9 H91 sing N N 158 Z7Z C10 C12 doub Y N 159 Z7Z C10 H101 sing N N 160 Z7Z C11 C13 doub Y N 161 Z7Z C11 H111 sing N N 162 Z7Z C12 C13 sing Y N 163 Z7Z C12 H121 sing N N 164 Z7Z C13 H131 sing N N 165 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Department of Energy (DOE, United States)' 'United States' DE-AC02-06CH11357 1 'Department of Energy (DOE, United States)' 'United States' 'DOE DE-SC0025651' 2 'National Science Foundation (NSF, United States)' 'United States' 2440121 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8VPD _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'C 1 2 1' _space_group.name_Hall 'C 2y' _space_group.IT_number 5 _space_group.crystal_system monoclinic _space_group.id 1 # _atom_sites.entry_id 13DO _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.026430 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.009672 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.109242 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029178 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? F ? ? 4.90428 4.07044 ? ? 12.99538 1.63651 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #