data_13SD # _entry.id 13SD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.408 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 13SD pdb_000013sd 10.2210/pdb13sd/pdb WWPDB D_1001409336 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-12-10 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.entry_id 13SD _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2025-10-10 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.pdb_format_compatible N _pdbx_database_status.methods_development_category ? # _pdbx_contact_author.id 1 _pdbx_contact_author.email emma.murphy@cmd.ox.ac.uk _pdbx_contact_author.name_first Murphy _pdbx_contact_author.name_last Emma _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4551-8068 _pdbx_contact_author.name_mi ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bradshaw, W.J.' 1 'Guenther, F.' 2 'Murphy, E.J.' 3 # _citation.id primary _citation.title 'PanDDA analysis group deposition' _citation.journal_abbrev 'To Be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.identifier_ORCID _citation_author.ordinal primary 'Bradshaw, W.J.' ? 1 primary 'Guenther, F.' ? 2 primary 'Murphy, E.J.' ? 3 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'E3 ubiquitin-protein ligase MYLIP' 8820.361 4 2.3.2.27 ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 8 ? ? ? ? 3 non-polymer syn '3-ethyl-5-methyl-4-[(3-methyl-1H-pyrazol-1-yl)methyl]-1,2-oxazole' 205.256 1 ? ? ? ? 4 water nat water 18.015 295 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Inducible degrader of the LDL-receptor,Idol,Myosin regulatory light chain interacting protein,MIR,RING-type E3 ubiquitin transferase MYLIP ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code SQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVYLPTHTSLLNLTVI _entity_poly.pdbx_seq_one_letter_code_can SQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVYLPTHTSLLNLTVI _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 '3-ethyl-5-methyl-4-[(3-methyl-1H-pyrazol-1-yl)methyl]-1,2-oxazole' A1CYB 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLN n 1 3 GLN n 1 4 THR n 1 5 ARG n 1 6 VAL n 1 7 LEU n 1 8 GLN n 1 9 GLU n 1 10 LYS n 1 11 LEU n 1 12 ARG n 1 13 LYS n 1 14 LEU n 1 15 LYS n 1 16 GLU n 1 17 ALA n 1 18 MET n 1 19 LEU n 1 20 CYS n 1 21 MET n 1 22 VAL n 1 23 CYS n 1 24 CYS n 1 25 GLU n 1 26 GLU n 1 27 GLU n 1 28 ILE n 1 29 ASN n 1 30 SER n 1 31 THR n 1 32 PHE n 1 33 CYS n 1 34 PRO n 1 35 CYS n 1 36 GLY n 1 37 HIS n 1 38 THR n 1 39 VAL n 1 40 CYS n 1 41 CYS n 1 42 GLU n 1 43 SER n 1 44 CYS n 1 45 ALA n 1 46 ALA n 1 47 GLN n 1 48 LEU n 1 49 GLN n 1 50 SER n 1 51 CYS n 1 52 PRO n 1 53 VAL n 1 54 CYS n 1 55 ARG n 1 56 SER n 1 57 ARG n 1 58 VAL n 1 59 GLU n 1 60 HIS n 1 61 VAL n 1 62 GLN n 1 63 HIS n 1 64 VAL n 1 65 TYR n 1 66 LEU n 1 67 PRO n 1 68 THR n 1 69 HIS n 1 70 THR n 1 71 SER n 1 72 LEU n 1 73 LEU n 1 74 ASN n 1 75 LEU n 1 76 THR n 1 77 VAL n 1 78 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 78 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MYLIP, BZF1, IDOL, BM-023, PP5242' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1CYB non-polymer . '3-ethyl-5-methyl-4-[(3-methyl-1H-pyrazol-1-yl)methyl]-1,2-oxazole' ? 'C11 H15 N3 O' 205.256 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 368 368 SER SER A . n A 1 2 GLN 2 369 369 GLN GLN A . n A 1 3 GLN 3 370 370 GLN GLN A . n A 1 4 THR 4 371 371 THR THR A . n A 1 5 ARG 5 372 372 ARG ARG A . n A 1 6 VAL 6 373 373 VAL VAL A . n A 1 7 LEU 7 374 374 LEU LEU A . n A 1 8 GLN 8 375 375 GLN GLN A . n A 1 9 GLU 9 376 376 GLU GLU A . n A 1 10 LYS 10 377 377 LYS LYS A . n A 1 11 LEU 11 378 378 LEU LEU A . n A 1 12 ARG 12 379 379 ARG ARG A . n A 1 13 LYS 13 380 380 LYS LYS A . n A 1 14 LEU 14 381 381 LEU LEU A . n A 1 15 LYS 15 382 382 LYS LYS A . n A 1 16 GLU 16 383 383 GLU GLU A . n A 1 17 ALA 17 384 384 ALA ALA A . n A 1 18 MET 18 385 385 MET MET A . n A 1 19 LEU 19 386 386 LEU LEU A . n A 1 20 CYS 20 387 387 CYS CYS A . n A 1 21 MET 21 388 388 MET MET A . n A 1 22 VAL 22 389 389 VAL VAL A . n A 1 23 CYS 23 390 390 CYS CYS A . n A 1 24 CYS 24 391 391 CYS CYS A . n A 1 25 GLU 25 392 392 GLU GLU A . n A 1 26 GLU 26 393 393 GLU GLU A . n A 1 27 GLU 27 394 394 GLU GLU A . n A 1 28 ILE 28 395 395 ILE ILE A . n A 1 29 ASN 29 396 396 ASN ASN A . n A 1 30 SER 30 397 397 SER SER A . n A 1 31 THR 31 398 398 THR THR A . n A 1 32 PHE 32 399 399 PHE PHE A . n A 1 33 CYS 33 400 400 CYS CYS A . n A 1 34 PRO 34 401 401 PRO PRO A . n A 1 35 CYS 35 402 402 CYS CYS A . n A 1 36 GLY 36 403 403 GLY GLY A . n A 1 37 HIS 37 404 404 HIS HIS A . n A 1 38 THR 38 405 405 THR THR A . n A 1 39 VAL 39 406 406 VAL VAL A . n A 1 40 CYS 40 407 407 CYS CYS A . n A 1 41 CYS 41 408 408 CYS CYS A . n A 1 42 GLU 42 409 409 GLU GLU A . n A 1 43 SER 43 410 410 SER SER A . n A 1 44 CYS 44 411 411 CYS CYS A . n A 1 45 ALA 45 412 412 ALA ALA A . n A 1 46 ALA 46 413 413 ALA ALA A . n A 1 47 GLN 47 414 414 GLN GLN A . n A 1 48 LEU 48 415 415 LEU LEU A . n A 1 49 GLN 49 416 416 GLN GLN A . n A 1 50 SER 50 417 417 SER SER A . n A 1 51 CYS 51 418 418 CYS CYS A . n A 1 52 PRO 52 419 419 PRO PRO A . n A 1 53 VAL 53 420 420 VAL VAL A . n A 1 54 CYS 54 421 421 CYS CYS A . n A 1 55 ARG 55 422 422 ARG ARG A . n A 1 56 SER 56 423 423 SER SER A . n A 1 57 ARG 57 424 424 ARG ARG A . n A 1 58 VAL 58 425 425 VAL VAL A . n A 1 59 GLU 59 426 426 GLU GLU A . n A 1 60 HIS 60 427 427 HIS HIS A . n A 1 61 VAL 61 428 428 VAL VAL A . n A 1 62 GLN 62 429 429 GLN GLN A . n A 1 63 HIS 63 430 430 HIS HIS A . n A 1 64 VAL 64 431 431 VAL VAL A . n A 1 65 TYR 65 432 432 TYR TYR A . n A 1 66 LEU 66 433 433 LEU LEU A . n A 1 67 PRO 67 434 434 PRO PRO A . n A 1 68 THR 68 435 435 THR THR A . n A 1 69 HIS 69 436 436 HIS HIS A . n A 1 70 THR 70 437 437 THR THR A . n A 1 71 SER 71 438 438 SER SER A . n A 1 72 LEU 72 439 439 LEU LEU A . n A 1 73 LEU 73 440 440 LEU LEU A . n A 1 74 ASN 74 441 441 ASN ASN A . n A 1 75 LEU 75 442 442 LEU LEU A . n A 1 76 THR 76 443 443 THR THR A . n A 1 77 VAL 77 444 ? ? ? A . n A 1 78 ILE 78 445 ? ? ? A . n B 1 1 SER 1 368 368 SER SER B . n B 1 2 GLN 2 369 369 GLN GLN B . n B 1 3 GLN 3 370 370 GLN GLN B . n B 1 4 THR 4 371 371 THR THR B . n B 1 5 ARG 5 372 372 ARG ARG B . n B 1 6 VAL 6 373 373 VAL VAL B . n B 1 7 LEU 7 374 374 LEU LEU B . n B 1 8 GLN 8 375 375 GLN GLN B . n B 1 9 GLU 9 376 376 GLU GLU B . n B 1 10 LYS 10 377 377 LYS LYS B . n B 1 11 LEU 11 378 378 LEU LEU B . n B 1 12 ARG 12 379 379 ARG ARG B . n B 1 13 LYS 13 380 380 LYS LYS B . n B 1 14 LEU 14 381 381 LEU LEU B . n B 1 15 LYS 15 382 382 LYS LYS B . n B 1 16 GLU 16 383 383 GLU GLU B . n B 1 17 ALA 17 384 384 ALA ALA B . n B 1 18 MET 18 385 385 MET MET B . n B 1 19 LEU 19 386 386 LEU LEU B . n B 1 20 CYS 20 387 387 CYS CYS B . n B 1 21 MET 21 388 388 MET MET B . n B 1 22 VAL 22 389 389 VAL VAL B . n B 1 23 CYS 23 390 390 CYS CYS B . n B 1 24 CYS 24 391 391 CYS CYS B . n B 1 25 GLU 25 392 392 GLU GLU B . n B 1 26 GLU 26 393 393 GLU GLU B . n B 1 27 GLU 27 394 394 GLU GLU B . n B 1 28 ILE 28 395 395 ILE ILE B . n B 1 29 ASN 29 396 396 ASN ASN B . n B 1 30 SER 30 397 397 SER SER B . n B 1 31 THR 31 398 398 THR THR B . n B 1 32 PHE 32 399 399 PHE PHE B . n B 1 33 CYS 33 400 400 CYS CYS B . n B 1 34 PRO 34 401 401 PRO PRO B . n B 1 35 CYS 35 402 402 CYS CYS B . n B 1 36 GLY 36 403 403 GLY GLY B . n B 1 37 HIS 37 404 404 HIS HIS B . n B 1 38 THR 38 405 405 THR THR B . n B 1 39 VAL 39 406 406 VAL VAL B . n B 1 40 CYS 40 407 407 CYS CYS B . n B 1 41 CYS 41 408 408 CYS CYS B . n B 1 42 GLU 42 409 409 GLU GLU B . n B 1 43 SER 43 410 410 SER SER B . n B 1 44 CYS 44 411 411 CYS CYS B . n B 1 45 ALA 45 412 412 ALA ALA B . n B 1 46 ALA 46 413 413 ALA ALA B . n B 1 47 GLN 47 414 414 GLN GLN B . n B 1 48 LEU 48 415 415 LEU LEU B . n B 1 49 GLN 49 416 416 GLN GLN B . n B 1 50 SER 50 417 417 SER SER B . n B 1 51 CYS 51 418 418 CYS CYS B . n B 1 52 PRO 52 419 419 PRO PRO B . n B 1 53 VAL 53 420 420 VAL VAL B . n B 1 54 CYS 54 421 421 CYS CYS B . n B 1 55 ARG 55 422 422 ARG ARG B . n B 1 56 SER 56 423 423 SER SER B . n B 1 57 ARG 57 424 424 ARG ARG B . n B 1 58 VAL 58 425 425 VAL VAL B . n B 1 59 GLU 59 426 426 GLU GLU B . n B 1 60 HIS 60 427 427 HIS HIS B . n B 1 61 VAL 61 428 428 VAL VAL B . n B 1 62 GLN 62 429 429 GLN GLN B . n B 1 63 HIS 63 430 430 HIS HIS B . n B 1 64 VAL 64 431 431 VAL VAL B . n B 1 65 TYR 65 432 432 TYR TYR B . n B 1 66 LEU 66 433 433 LEU LEU B . n B 1 67 PRO 67 434 434 PRO PRO B . n B 1 68 THR 68 435 435 THR THR B . n B 1 69 HIS 69 436 ? ? ? B . n B 1 70 THR 70 437 ? ? ? B . n B 1 71 SER 71 438 ? ? ? B . n B 1 72 LEU 72 439 ? ? ? B . n B 1 73 LEU 73 440 ? ? ? B . n B 1 74 ASN 74 441 ? ? ? B . n B 1 75 LEU 75 442 ? ? ? B . n B 1 76 THR 76 443 ? ? ? B . n B 1 77 VAL 77 444 ? ? ? B . n B 1 78 ILE 78 445 ? ? ? B . n C 1 1 SER 1 368 368 SER SER C . n C 1 2 GLN 2 369 369 GLN GLN C . n C 1 3 GLN 3 370 370 GLN GLN C . n C 1 4 THR 4 371 371 THR THR C . n C 1 5 ARG 5 372 372 ARG ARG C . n C 1 6 VAL 6 373 373 VAL VAL C . n C 1 7 LEU 7 374 374 LEU LEU C . n C 1 8 GLN 8 375 375 GLN GLN C . n C 1 9 GLU 9 376 376 GLU GLU C . n C 1 10 LYS 10 377 377 LYS LYS C . n C 1 11 LEU 11 378 378 LEU LEU C . n C 1 12 ARG 12 379 379 ARG ARG C . n C 1 13 LYS 13 380 380 LYS LYS C . n C 1 14 LEU 14 381 381 LEU LEU C . n C 1 15 LYS 15 382 382 LYS LYS C . n C 1 16 GLU 16 383 383 GLU GLU C . n C 1 17 ALA 17 384 384 ALA ALA C . n C 1 18 MET 18 385 385 MET MET C . n C 1 19 LEU 19 386 386 LEU LEU C . n C 1 20 CYS 20 387 387 CYS CYS C . n C 1 21 MET 21 388 388 MET MET C . n C 1 22 VAL 22 389 389 VAL VAL C . n C 1 23 CYS 23 390 390 CYS CYS C . n C 1 24 CYS 24 391 391 CYS CYS C . n C 1 25 GLU 25 392 392 GLU GLU C . n C 1 26 GLU 26 393 393 GLU GLU C . n C 1 27 GLU 27 394 394 GLU GLU C . n C 1 28 ILE 28 395 395 ILE ILE C . n C 1 29 ASN 29 396 396 ASN ASN C . n C 1 30 SER 30 397 397 SER SER C . n C 1 31 THR 31 398 398 THR THR C . n C 1 32 PHE 32 399 399 PHE PHE C . n C 1 33 CYS 33 400 400 CYS CYS C . n C 1 34 PRO 34 401 401 PRO PRO C . n C 1 35 CYS 35 402 402 CYS CYS C . n C 1 36 GLY 36 403 403 GLY GLY C . n C 1 37 HIS 37 404 404 HIS HIS C . n C 1 38 THR 38 405 405 THR THR C . n C 1 39 VAL 39 406 406 VAL VAL C . n C 1 40 CYS 40 407 407 CYS CYS C . n C 1 41 CYS 41 408 408 CYS CYS C . n C 1 42 GLU 42 409 409 GLU GLU C . n C 1 43 SER 43 410 410 SER SER C . n C 1 44 CYS 44 411 411 CYS CYS C . n C 1 45 ALA 45 412 412 ALA ALA C . n C 1 46 ALA 46 413 413 ALA ALA C . n C 1 47 GLN 47 414 414 GLN GLN C . n C 1 48 LEU 48 415 415 LEU LEU C . n C 1 49 GLN 49 416 416 GLN GLN C . n C 1 50 SER 50 417 417 SER SER C . n C 1 51 CYS 51 418 418 CYS CYS C . n C 1 52 PRO 52 419 419 PRO PRO C . n C 1 53 VAL 53 420 420 VAL VAL C . n C 1 54 CYS 54 421 421 CYS CYS C . n C 1 55 ARG 55 422 422 ARG ARG C . n C 1 56 SER 56 423 423 SER SER C . n C 1 57 ARG 57 424 424 ARG ARG C . n C 1 58 VAL 58 425 425 VAL VAL C . n C 1 59 GLU 59 426 426 GLU GLU C . n C 1 60 HIS 60 427 427 HIS HIS C . n C 1 61 VAL 61 428 428 VAL VAL C . n C 1 62 GLN 62 429 429 GLN GLN C . n C 1 63 HIS 63 430 430 HIS HIS C . n C 1 64 VAL 64 431 431 VAL VAL C . n C 1 65 TYR 65 432 432 TYR TYR C . n C 1 66 LEU 66 433 433 LEU LEU C . n C 1 67 PRO 67 434 434 PRO PRO C . n C 1 68 THR 68 435 435 THR THR C . n C 1 69 HIS 69 436 436 HIS HIS C . n C 1 70 THR 70 437 ? ? ? C . n C 1 71 SER 71 438 ? ? ? C . n C 1 72 LEU 72 439 ? ? ? C . n C 1 73 LEU 73 440 ? ? ? C . n C 1 74 ASN 74 441 ? ? ? C . n C 1 75 LEU 75 442 ? ? ? C . n C 1 76 THR 76 443 ? ? ? C . n C 1 77 VAL 77 444 ? ? ? C . n C 1 78 ILE 78 445 ? ? ? C . n D 1 1 SER 1 368 368 SER SER D . n D 1 2 GLN 2 369 369 GLN GLN D . n D 1 3 GLN 3 370 370 GLN GLN D . n D 1 4 THR 4 371 371 THR THR D . n D 1 5 ARG 5 372 372 ARG ARG D . n D 1 6 VAL 6 373 373 VAL VAL D . n D 1 7 LEU 7 374 374 LEU LEU D . n D 1 8 GLN 8 375 375 GLN GLN D . n D 1 9 GLU 9 376 376 GLU GLU D . n D 1 10 LYS 10 377 377 LYS LYS D . n D 1 11 LEU 11 378 378 LEU LEU D . n D 1 12 ARG 12 379 379 ARG ARG D . n D 1 13 LYS 13 380 380 LYS LYS D . n D 1 14 LEU 14 381 381 LEU LEU D . n D 1 15 LYS 15 382 382 LYS LYS D . n D 1 16 GLU 16 383 383 GLU GLU D . n D 1 17 ALA 17 384 384 ALA ALA D . n D 1 18 MET 18 385 385 MET MET D . n D 1 19 LEU 19 386 386 LEU LEU D . n D 1 20 CYS 20 387 387 CYS CYS D . n D 1 21 MET 21 388 388 MET MET D . n D 1 22 VAL 22 389 389 VAL VAL D . n D 1 23 CYS 23 390 390 CYS CYS D . n D 1 24 CYS 24 391 391 CYS CYS D . n D 1 25 GLU 25 392 392 GLU GLU D . n D 1 26 GLU 26 393 393 GLU GLU D . n D 1 27 GLU 27 394 394 GLU GLU D . n D 1 28 ILE 28 395 395 ILE ILE D . n D 1 29 ASN 29 396 396 ASN ASN D . n D 1 30 SER 30 397 397 SER SER D . n D 1 31 THR 31 398 398 THR THR D . n D 1 32 PHE 32 399 399 PHE PHE D . n D 1 33 CYS 33 400 400 CYS CYS D . n D 1 34 PRO 34 401 401 PRO PRO D . n D 1 35 CYS 35 402 402 CYS CYS D . n D 1 36 GLY 36 403 403 GLY GLY D . n D 1 37 HIS 37 404 404 HIS HIS D . n D 1 38 THR 38 405 405 THR THR D . n D 1 39 VAL 39 406 406 VAL VAL D . n D 1 40 CYS 40 407 407 CYS CYS D . n D 1 41 CYS 41 408 408 CYS CYS D . n D 1 42 GLU 42 409 409 GLU GLU D . n D 1 43 SER 43 410 410 SER SER D . n D 1 44 CYS 44 411 411 CYS CYS D . n D 1 45 ALA 45 412 412 ALA ALA D . n D 1 46 ALA 46 413 413 ALA ALA D . n D 1 47 GLN 47 414 414 GLN GLN D . n D 1 48 LEU 48 415 415 LEU LEU D . n D 1 49 GLN 49 416 416 GLN GLN D . n D 1 50 SER 50 417 417 SER SER D . n D 1 51 CYS 51 418 418 CYS CYS D . n D 1 52 PRO 52 419 419 PRO PRO D . n D 1 53 VAL 53 420 420 VAL VAL D . n D 1 54 CYS 54 421 421 CYS CYS D . n D 1 55 ARG 55 422 422 ARG ARG D . n D 1 56 SER 56 423 423 SER SER D . n D 1 57 ARG 57 424 424 ARG ARG D . n D 1 58 VAL 58 425 425 VAL VAL D . n D 1 59 GLU 59 426 426 GLU GLU D . n D 1 60 HIS 60 427 427 HIS HIS D . n D 1 61 VAL 61 428 428 VAL VAL D . n D 1 62 GLN 62 429 429 GLN GLN D . n D 1 63 HIS 63 430 430 HIS HIS D . n D 1 64 VAL 64 431 431 VAL VAL D . n D 1 65 TYR 65 432 432 TYR TYR D . n D 1 66 LEU 66 433 433 LEU LEU D . n D 1 67 PRO 67 434 434 PRO PRO D . n D 1 68 THR 68 435 435 THR THR D . n D 1 69 HIS 69 436 436 HIS HIS D . n D 1 70 THR 70 437 ? ? ? D . n D 1 71 SER 71 438 ? ? ? D . n D 1 72 LEU 72 439 ? ? ? D . n D 1 73 LEU 73 440 ? ? ? D . n D 1 74 ASN 74 441 ? ? ? D . n D 1 75 LEU 75 442 ? ? ? D . n D 1 76 THR 76 443 ? ? ? D . n D 1 77 VAL 77 444 ? ? ? D . n D 1 78 ILE 78 445 ? ? ? D . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1CYB _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1CYB _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN 1 501 501 ZN ZN A . F 2 ZN 1 502 502 ZN ZN A . G 2 ZN 1 501 501 ZN ZN B . H 2 ZN 1 502 502 ZN ZN B . I 3 A1CYB 1 503 503 A1CYB LIG B . J 2 ZN 1 501 501 ZN ZN C . K 2 ZN 1 502 502 ZN ZN C . L 2 ZN 1 501 501 ZN ZN D . M 2 ZN 1 502 502 ZN ZN D . N 4 HOH 1 601 122 HOH HOH A . N 4 HOH 2 602 350 HOH HOH A . N 4 HOH 3 603 250 HOH HOH A . N 4 HOH 4 604 239 HOH HOH A . N 4 HOH 5 605 273 HOH HOH A . N 4 HOH 6 606 140 HOH HOH A . N 4 HOH 7 607 310 HOH HOH A . N 4 HOH 8 608 348 HOH HOH A . N 4 HOH 9 609 149 HOH HOH A . N 4 HOH 10 610 12 HOH HOH A . N 4 HOH 11 611 210 HOH HOH A . N 4 HOH 12 612 209 HOH HOH A . N 4 HOH 13 613 76 HOH HOH A . N 4 HOH 14 614 254 HOH HOH A . N 4 HOH 15 615 6 HOH HOH A . N 4 HOH 16 616 339 HOH HOH A . N 4 HOH 17 617 36 HOH HOH A . N 4 HOH 18 618 86 HOH HOH A . N 4 HOH 19 619 39 HOH HOH A . N 4 HOH 20 620 162 HOH HOH A . N 4 HOH 21 621 88 HOH HOH A . N 4 HOH 22 622 282 HOH HOH A . N 4 HOH 23 623 221 HOH HOH A . N 4 HOH 24 624 105 HOH HOH A . N 4 HOH 25 625 40 HOH HOH A . N 4 HOH 26 626 19 HOH HOH A . N 4 HOH 27 627 30 HOH HOH A . N 4 HOH 28 628 87 HOH HOH A . N 4 HOH 29 629 188 HOH HOH A . N 4 HOH 30 630 17 HOH HOH A . N 4 HOH 31 631 235 HOH HOH A . N 4 HOH 32 632 45 HOH HOH A . N 4 HOH 33 633 104 HOH HOH A . N 4 HOH 34 634 301 HOH HOH A . N 4 HOH 35 635 74 HOH HOH A . N 4 HOH 36 636 75 HOH HOH A . N 4 HOH 37 637 61 HOH HOH A . N 4 HOH 38 638 207 HOH HOH A . N 4 HOH 39 639 115 HOH HOH A . N 4 HOH 40 640 347 HOH HOH A . N 4 HOH 41 641 31 HOH HOH A . N 4 HOH 42 642 35 HOH HOH A . N 4 HOH 43 643 102 HOH HOH A . N 4 HOH 44 644 90 HOH HOH A . N 4 HOH 45 645 351 HOH HOH A . N 4 HOH 46 646 327 HOH HOH A . N 4 HOH 47 647 159 HOH HOH A . N 4 HOH 48 648 4 HOH HOH A . N 4 HOH 49 649 50 HOH HOH A . N 4 HOH 50 650 256 HOH HOH A . N 4 HOH 51 651 68 HOH HOH A . N 4 HOH 52 652 186 HOH HOH A . N 4 HOH 53 653 154 HOH HOH A . N 4 HOH 54 654 331 HOH HOH A . N 4 HOH 55 655 99 HOH HOH A . N 4 HOH 56 656 253 HOH HOH A . N 4 HOH 57 657 73 HOH HOH A . N 4 HOH 58 658 138 HOH HOH A . N 4 HOH 59 659 325 HOH HOH A . N 4 HOH 60 660 148 HOH HOH A . N 4 HOH 61 661 183 HOH HOH A . N 4 HOH 62 662 357 HOH HOH A . N 4 HOH 63 663 321 HOH HOH A . N 4 HOH 64 664 228 HOH HOH A . N 4 HOH 65 665 268 HOH HOH A . N 4 HOH 66 666 26 HOH HOH A . N 4 HOH 67 667 109 HOH HOH A . N 4 HOH 68 668 224 HOH HOH A . N 4 HOH 69 669 180 HOH HOH A . N 4 HOH 70 670 108 HOH HOH A . N 4 HOH 71 671 197 HOH HOH A . N 4 HOH 72 672 193 HOH HOH A . N 4 HOH 73 673 220 HOH HOH A . N 4 HOH 74 674 142 HOH HOH A . N 4 HOH 75 675 342 HOH HOH A . N 4 HOH 76 676 217 HOH HOH A . N 4 HOH 77 677 243 HOH HOH A . N 4 HOH 78 678 219 HOH HOH A . N 4 HOH 79 679 238 HOH HOH A . O 4 HOH 1 601 117 HOH HOH B . O 4 HOH 2 602 352 HOH HOH B . O 4 HOH 3 603 157 HOH HOH B . O 4 HOH 4 604 155 HOH HOH B . O 4 HOH 5 605 283 HOH HOH B . O 4 HOH 6 606 158 HOH HOH B . O 4 HOH 7 607 328 HOH HOH B . O 4 HOH 8 608 85 HOH HOH B . O 4 HOH 9 609 181 HOH HOH B . O 4 HOH 10 610 333 HOH HOH B . O 4 HOH 11 611 14 HOH HOH B . O 4 HOH 12 612 52 HOH HOH B . O 4 HOH 13 613 38 HOH HOH B . O 4 HOH 14 614 72 HOH HOH B . O 4 HOH 15 615 201 HOH HOH B . O 4 HOH 16 616 13 HOH HOH B . O 4 HOH 17 617 112 HOH HOH B . O 4 HOH 18 618 60 HOH HOH B . O 4 HOH 19 619 44 HOH HOH B . O 4 HOH 20 620 94 HOH HOH B . O 4 HOH 21 621 318 HOH HOH B . O 4 HOH 22 622 106 HOH HOH B . O 4 HOH 23 623 322 HOH HOH B . O 4 HOH 24 624 338 HOH HOH B . O 4 HOH 25 625 192 HOH HOH B . O 4 HOH 26 626 326 HOH HOH B . O 4 HOH 27 627 101 HOH HOH B . O 4 HOH 28 628 118 HOH HOH B . O 4 HOH 29 629 287 HOH HOH B . O 4 HOH 30 630 83 HOH HOH B . O 4 HOH 31 631 2 HOH HOH B . O 4 HOH 32 632 1 HOH HOH B . O 4 HOH 33 633 43 HOH HOH B . O 4 HOH 34 634 355 HOH HOH B . O 4 HOH 35 635 214 HOH HOH B . O 4 HOH 36 636 124 HOH HOH B . O 4 HOH 37 637 41 HOH HOH B . O 4 HOH 38 638 59 HOH HOH B . O 4 HOH 39 639 80 HOH HOH B . O 4 HOH 40 640 62 HOH HOH B . O 4 HOH 41 641 185 HOH HOH B . O 4 HOH 42 642 51 HOH HOH B . O 4 HOH 43 643 57 HOH HOH B . O 4 HOH 44 644 317 HOH HOH B . O 4 HOH 45 645 132 HOH HOH B . O 4 HOH 46 646 212 HOH HOH B . O 4 HOH 47 647 179 HOH HOH B . O 4 HOH 48 648 48 HOH HOH B . O 4 HOH 49 649 182 HOH HOH B . O 4 HOH 50 650 244 HOH HOH B . O 4 HOH 51 651 15 HOH HOH B . O 4 HOH 52 652 345 HOH HOH B . O 4 HOH 53 653 69 HOH HOH B . O 4 HOH 54 654 92 HOH HOH B . O 4 HOH 55 655 293 HOH HOH B . O 4 HOH 56 656 195 HOH HOH B . O 4 HOH 57 657 264 HOH HOH B . O 4 HOH 58 658 334 HOH HOH B . O 4 HOH 59 659 290 HOH HOH B . O 4 HOH 60 660 281 HOH HOH B . O 4 HOH 61 661 24 HOH HOH B . O 4 HOH 62 662 203 HOH HOH B . O 4 HOH 63 663 236 HOH HOH B . O 4 HOH 64 664 330 HOH HOH B . O 4 HOH 65 665 262 HOH HOH B . O 4 HOH 66 666 277 HOH HOH B . O 4 HOH 67 667 346 HOH HOH B . O 4 HOH 68 668 341 HOH HOH B . O 4 HOH 69 669 136 HOH HOH B . O 4 HOH 70 670 123 HOH HOH B . O 4 HOH 71 671 245 HOH HOH B . O 4 HOH 72 672 308 HOH HOH B . O 4 HOH 73 673 84 HOH HOH B . O 4 HOH 74 674 16 HOH HOH B . O 4 HOH 75 675 120 HOH HOH B . O 4 HOH 76 676 247 HOH HOH B . O 4 HOH 77 677 233 HOH HOH B . O 4 HOH 78 678 107 HOH HOH B . O 4 HOH 79 679 344 HOH HOH B . O 4 HOH 80 680 343 HOH HOH B . O 4 HOH 81 681 234 HOH HOH B . P 4 HOH 1 601 358 HOH HOH C . P 4 HOH 2 602 302 HOH HOH C . P 4 HOH 3 603 97 HOH HOH C . P 4 HOH 4 604 54 HOH HOH C . P 4 HOH 5 605 177 HOH HOH C . P 4 HOH 6 606 152 HOH HOH C . P 4 HOH 7 607 11 HOH HOH C . P 4 HOH 8 608 166 HOH HOH C . P 4 HOH 9 609 130 HOH HOH C . P 4 HOH 10 610 128 HOH HOH C . P 4 HOH 11 611 232 HOH HOH C . P 4 HOH 12 612 187 HOH HOH C . P 4 HOH 13 613 146 HOH HOH C . P 4 HOH 14 614 145 HOH HOH C . P 4 HOH 15 615 137 HOH HOH C . P 4 HOH 16 616 206 HOH HOH C . P 4 HOH 17 617 252 HOH HOH C . P 4 HOH 18 618 171 HOH HOH C . P 4 HOH 19 619 303 HOH HOH C . P 4 HOH 20 620 25 HOH HOH C . P 4 HOH 21 621 163 HOH HOH C . P 4 HOH 22 622 134 HOH HOH C . P 4 HOH 23 623 78 HOH HOH C . P 4 HOH 24 624 349 HOH HOH C . P 4 HOH 25 625 184 HOH HOH C . P 4 HOH 26 626 9 HOH HOH C . P 4 HOH 27 627 332 HOH HOH C . P 4 HOH 28 628 5 HOH HOH C . P 4 HOH 29 629 53 HOH HOH C . P 4 HOH 30 630 55 HOH HOH C . P 4 HOH 31 631 34 HOH HOH C . P 4 HOH 32 632 33 HOH HOH C . P 4 HOH 33 633 191 HOH HOH C . P 4 HOH 34 634 42 HOH HOH C . P 4 HOH 35 635 257 HOH HOH C . P 4 HOH 36 636 237 HOH HOH C . P 4 HOH 37 637 153 HOH HOH C . P 4 HOH 38 638 161 HOH HOH C . P 4 HOH 39 639 64 HOH HOH C . P 4 HOH 40 640 100 HOH HOH C . P 4 HOH 41 641 46 HOH HOH C . P 4 HOH 42 642 20 HOH HOH C . P 4 HOH 43 643 79 HOH HOH C . P 4 HOH 44 644 127 HOH HOH C . P 4 HOH 45 645 27 HOH HOH C . P 4 HOH 46 646 173 HOH HOH C . P 4 HOH 47 647 279 HOH HOH C . P 4 HOH 48 648 66 HOH HOH C . P 4 HOH 49 649 141 HOH HOH C . P 4 HOH 50 650 65 HOH HOH C . P 4 HOH 51 651 32 HOH HOH C . P 4 HOH 52 652 77 HOH HOH C . P 4 HOH 53 653 67 HOH HOH C . P 4 HOH 54 654 309 HOH HOH C . P 4 HOH 55 655 164 HOH HOH C . P 4 HOH 56 656 294 HOH HOH C . P 4 HOH 57 657 265 HOH HOH C . P 4 HOH 58 658 304 HOH HOH C . P 4 HOH 59 659 169 HOH HOH C . P 4 HOH 60 660 227 HOH HOH C . P 4 HOH 61 661 280 HOH HOH C . P 4 HOH 62 662 49 HOH HOH C . P 4 HOH 63 663 240 HOH HOH C . P 4 HOH 64 664 211 HOH HOH C . P 4 HOH 65 665 81 HOH HOH C . P 4 HOH 66 666 218 HOH HOH C . P 4 HOH 67 667 222 HOH HOH C . P 4 HOH 68 668 225 HOH HOH C . Q 4 HOH 1 601 335 HOH HOH D . Q 4 HOH 2 602 29 HOH HOH D . Q 4 HOH 3 603 116 HOH HOH D . Q 4 HOH 4 604 156 HOH HOH D . Q 4 HOH 5 605 7 HOH HOH D . Q 4 HOH 6 606 323 HOH HOH D . Q 4 HOH 7 607 37 HOH HOH D . Q 4 HOH 8 608 8 HOH HOH D . Q 4 HOH 9 609 269 HOH HOH D . Q 4 HOH 10 610 82 HOH HOH D . Q 4 HOH 11 611 22 HOH HOH D . Q 4 HOH 12 612 204 HOH HOH D . Q 4 HOH 13 613 291 HOH HOH D . Q 4 HOH 14 614 47 HOH HOH D . Q 4 HOH 15 615 18 HOH HOH D . Q 4 HOH 16 616 208 HOH HOH D . Q 4 HOH 17 617 114 HOH HOH D . Q 4 HOH 18 618 289 HOH HOH D . Q 4 HOH 19 619 172 HOH HOH D . Q 4 HOH 20 620 324 HOH HOH D . Q 4 HOH 21 621 23 HOH HOH D . Q 4 HOH 22 622 95 HOH HOH D . Q 4 HOH 23 623 356 HOH HOH D . Q 4 HOH 24 624 354 HOH HOH D . Q 4 HOH 25 625 21 HOH HOH D . Q 4 HOH 26 626 56 HOH HOH D . Q 4 HOH 27 627 226 HOH HOH D . Q 4 HOH 28 628 288 HOH HOH D . Q 4 HOH 29 629 111 HOH HOH D . Q 4 HOH 30 630 199 HOH HOH D . Q 4 HOH 31 631 3 HOH HOH D . Q 4 HOH 32 632 58 HOH HOH D . Q 4 HOH 33 633 113 HOH HOH D . Q 4 HOH 34 634 103 HOH HOH D . Q 4 HOH 35 635 296 HOH HOH D . Q 4 HOH 36 636 223 HOH HOH D . Q 4 HOH 37 637 125 HOH HOH D . Q 4 HOH 38 638 167 HOH HOH D . Q 4 HOH 39 639 216 HOH HOH D . Q 4 HOH 40 640 202 HOH HOH D . Q 4 HOH 41 641 194 HOH HOH D . Q 4 HOH 42 642 96 HOH HOH D . Q 4 HOH 43 643 121 HOH HOH D . Q 4 HOH 44 644 278 HOH HOH D . Q 4 HOH 45 645 151 HOH HOH D . Q 4 HOH 46 646 70 HOH HOH D . Q 4 HOH 47 647 299 HOH HOH D . Q 4 HOH 48 648 231 HOH HOH D . Q 4 HOH 49 649 126 HOH HOH D . Q 4 HOH 50 650 63 HOH HOH D . Q 4 HOH 51 651 175 HOH HOH D . Q 4 HOH 52 652 189 HOH HOH D . Q 4 HOH 53 653 178 HOH HOH D . Q 4 HOH 54 654 353 HOH HOH D . Q 4 HOH 55 655 259 HOH HOH D . Q 4 HOH 56 656 205 HOH HOH D . Q 4 HOH 57 657 260 HOH HOH D . Q 4 HOH 58 658 10 HOH HOH D . Q 4 HOH 59 659 270 HOH HOH D . Q 4 HOH 60 660 271 HOH HOH D . Q 4 HOH 61 661 295 HOH HOH D . Q 4 HOH 62 662 242 HOH HOH D . Q 4 HOH 63 663 230 HOH HOH D . Q 4 HOH 64 664 28 HOH HOH D . Q 4 HOH 65 665 150 HOH HOH D . Q 4 HOH 66 666 329 HOH HOH D . Q 4 HOH 67 667 119 HOH HOH D . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 BUSTER '2.10.4 (23-JAN-2024)' ? ? ? ? refinement ? ? ? 2 Aimless 0.7.7 23/04/21 program 'Phil Evans' ? 'data scaling' http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? ? 3 PDB_EXTRACT 3.23 'SEP. 23, 2016' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 XDS . ? program ? ? 'data reduction' ? ? ? 5 REFMAC . ? program ? ? phasing ? ? ? # _cell.entry_id 13SD _cell.length_a 44.715 _cell.length_b 48.178 _cell.length_c 70.669 _cell.angle_alpha 90.000 _cell.angle_beta 90.890 _cell.angle_gamma 90.000 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 13SD _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.crystals_number 1 _exptl.entry_id 13SD _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.000 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 42.98 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '200 mM Sodium acetate, 100 mM Tris, 30% w/v PEG 4000' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.crystal_id 1 _diffrn.ambient_temp_details ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS EIGER2 XE 9M' _diffrn_detector.pdbx_collection_date 2025-02-13 _diffrn_detector.diffrn_id 1 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92203 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_wavelength_list 0.92203 _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 13SD _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 39.820 _reflns.d_resolution_high 1.520 _reflns.number_obs 46398 _reflns.number_all ? _reflns.percent_possible_obs 99.900 _reflns.pdbx_Rmerge_I_obs 0.157 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.900 _reflns.B_iso_Wilson_estimate 19.480 _reflns.pdbx_redundancy 6.700 _reflns.pdbx_Rrim_I_all 0.170 _reflns.pdbx_Rpim_I_all 0.065 _reflns.pdbx_CC_half 0.994 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_number_measured_all 311311 _reflns.pdbx_scaling_rejects 0 _reflns.pdbx_chi_squared ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.details ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.520 1.550 ? ? 12018 ? 2.472 ? ? ? 5.400 ? 1.500 ? 2233 ? ? ? ? 97.600 2.754 1.194 0.263 1 2 8.330 39.820 ? ? 1728 ? 0.089 ? ? ? 5.600 ? 39.300 ? 307 ? ? ? ? 99.400 0.099 0.043 0.954 # _refine.entry_id 13SD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.5200 _refine.ls_d_res_low 21.4100 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.8000 _refine.ls_number_reflns_obs 46361 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1731 _refine.ls_R_factor_R_work 0.1721 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1924 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_number_reflns_R_free 2270 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 26.6100 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.8800 _refine.aniso_B[2][2] 0.8126 _refine.aniso_B[3][3] -2.6926 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.6606 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9570 _refine.correlation_coeff_Fo_to_Fc_free 0.9530 _refine.overall_SU_R_Cruickshank_DPI 0.0710 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.0700 _refine.pdbx_overall_SU_R_Blow_DPI 0.0760 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.0730 _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 9SA2 _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 72.980 _refine.B_iso_min 10.350 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_analyze.entry_id 13SD _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_obs 0.170 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.5200 _refine_hist.d_res_low 21.4100 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 295 _refine_hist.number_atoms_total 2512 _refine_hist.pdbx_number_residues_total 282 _refine_hist.pdbx_B_iso_mean_ligand 22.36 _refine_hist.pdbx_B_iso_mean_solvent 35.42 _refine_hist.pdbx_number_atoms_protein 2194 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' t_dihedral_angle_d 962 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes ? ? ? ? ? 'X-RAY DIFFRACTION' t_gen_planes 456 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 2459 ? ? 10.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd ? ? ? ? ? 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 333 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 2168 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 2459 0.011 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 3366 1.040 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 3.800 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 13.460 ? ? ? # _refine_ls_shell.d_res_high 1.5200 _refine_ls_shell.d_res_low 1.5300 _refine_ls_shell.pdbx_total_number_of_bins_used 51 _refine_ls_shell.percent_reflns_obs 91.3800 _refine_ls_shell.number_reflns_R_work 887 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2604 _refine_ls_shell.R_factor_R_free 0.2737 _refine_ls_shell.percent_reflns_R_free 4.4200 _refine_ls_shell.number_reflns_R_free 41 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 928 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 13SD _struct.title 'PanDDA analysis group deposition -- IDOL RING domain in complex with Z1516316257' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 13SD _struct_keywords.text 'Diamond I04-1 fragment screening, PanDDA, XChemExplorer, E3, ubiquitin, Zinc finger, RING, ligase' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 4 ? O N N 4 ? P N N 4 ? Q N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MYLIP_HUMAN _struct_ref.pdbx_db_accession Q8WY64 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code QQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVYLPTHTSLLNLTVI _struct_ref.pdbx_align_begin 369 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 13SD A 2 ? 78 ? Q8WY64 369 ? 445 ? 369 445 2 1 13SD B 2 ? 78 ? Q8WY64 369 ? 445 ? 369 445 3 1 13SD C 2 ? 78 ? Q8WY64 369 ? 445 ? 369 445 4 1 13SD D 2 ? 78 ? Q8WY64 369 ? 445 ? 369 445 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 13SD SER A 1 ? UNP Q8WY64 ? ? 'expression tag' 368 1 2 13SD SER B 1 ? UNP Q8WY64 ? ? 'expression tag' 368 2 3 13SD SER C 1 ? UNP Q8WY64 ? ? 'expression tag' 368 3 4 13SD SER D 1 ? UNP Q8WY64 ? ? 'expression tag' 368 4 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2720 ? 1 MORE -25 ? 1 'SSA (A^2)' 8720 ? 2 'ABSA (A^2)' 2130 ? 2 MORE -21 ? 2 'SSA (A^2)' 8570 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,G,H,I,N,O 2 1 C,D,J,K,L,M,P,Q # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 1 ? MET A 18 ? SER A 368 MET A 385 1 ? 18 HELX_P HELX_P2 AA2 CYS A 41 ? ALA A 46 ? CYS A 408 ALA A 413 1 ? 6 HELX_P HELX_P3 AA3 SER A 71 ? THR A 76 ? SER A 438 THR A 443 1 ? 6 HELX_P HELX_P4 AA4 GLN B 2 ? MET B 18 ? GLN B 369 MET B 385 1 ? 17 HELX_P HELX_P5 AA5 CYS B 41 ? GLN B 47 ? CYS B 408 GLN B 414 1 ? 7 HELX_P HELX_P6 AA6 GLN C 2 ? MET C 18 ? GLN C 369 MET C 385 1 ? 17 HELX_P HELX_P7 AA7 CYS C 41 ? GLN C 47 ? CYS C 408 GLN C 414 1 ? 7 HELX_P HELX_P8 AA8 GLN D 2 ? MET D 18 ? GLN D 369 MET D 385 1 ? 17 HELX_P HELX_P9 AA9 CYS D 41 ? GLN D 47 ? CYS D 408 GLN D 414 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 20 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 387 A ZN 502 1_555 ? ? ? ? ? ? ? 2.411 ? ? metalc2 metalc ? ? A CYS 23 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 390 A ZN 502 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc3 metalc ? ? A CYS 35 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 402 A ZN 501 1_555 ? ? ? ? ? ? ? 2.319 ? ? metalc4 metalc ? ? A HIS 37 ND1 ? ? ? 1_555 E ZN . ZN ? ? A HIS 404 A ZN 501 1_555 ? ? ? ? ? ? ? 2.050 ? ? metalc5 metalc ? ? A CYS 41 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 408 A ZN 502 1_555 ? ? ? ? ? ? ? 2.384 ? ? metalc6 metalc ? ? A CYS 44 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 411 A ZN 502 1_555 ? ? ? ? ? ? ? 2.376 ? ? metalc7 metalc ? ? A CYS 51 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 418 A ZN 501 1_555 ? ? ? ? ? ? ? 2.368 ? ? metalc8 metalc ? ? A CYS 54 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 421 A ZN 501 1_555 ? ? ? ? ? ? ? 2.349 ? ? metalc9 metalc ? ? B CYS 20 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 387 B ZN 502 1_555 ? ? ? ? ? ? ? 2.411 ? ? metalc10 metalc ? ? B CYS 23 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 390 B ZN 502 1_555 ? ? ? ? ? ? ? 2.353 ? ? metalc11 metalc ? ? B CYS 35 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 402 B ZN 501 1_555 ? ? ? ? ? ? ? 2.331 ? ? metalc12 metalc ? ? B HIS 37 ND1 ? ? ? 1_555 G ZN . ZN ? ? B HIS 404 B ZN 501 1_555 ? ? ? ? ? ? ? 2.009 ? ? metalc13 metalc ? ? B CYS 41 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 408 B ZN 502 1_555 ? ? ? ? ? ? ? 2.360 ? ? metalc14 metalc ? ? B CYS 44 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 411 B ZN 502 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc15 metalc ? ? B CYS 51 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 418 B ZN 501 1_555 ? ? ? ? ? ? ? 2.347 ? ? metalc16 metalc ? ? B CYS 54 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 421 B ZN 501 1_555 ? ? ? ? ? ? ? 2.346 ? ? metalc17 metalc ? ? C CYS 20 SG ? ? ? 1_555 K ZN . ZN ? ? C CYS 387 C ZN 502 1_555 ? ? ? ? ? ? ? 2.403 ? ? metalc18 metalc ? ? C CYS 23 SG ? ? ? 1_555 K ZN . ZN ? ? C CYS 390 C ZN 502 1_555 ? ? ? ? ? ? ? 2.400 ? ? metalc19 metalc ? ? C CYS 35 SG ? ? ? 1_555 J ZN . ZN ? ? C CYS 402 C ZN 501 1_555 ? ? ? ? ? ? ? 2.323 ? ? metalc20 metalc ? ? C HIS 37 ND1 ? ? ? 1_555 J ZN . ZN ? ? C HIS 404 C ZN 501 1_555 ? ? ? ? ? ? ? 2.035 ? ? metalc21 metalc ? ? C CYS 41 SG ? ? ? 1_555 K ZN . ZN ? ? C CYS 408 C ZN 502 1_555 ? ? ? ? ? ? ? 2.371 ? ? metalc22 metalc ? ? C CYS 44 SG ? ? ? 1_555 K ZN . ZN ? ? C CYS 411 C ZN 502 1_555 ? ? ? ? ? ? ? 2.356 ? ? metalc23 metalc ? ? C CYS 51 SG ? ? ? 1_555 J ZN . ZN ? ? C CYS 418 C ZN 501 1_555 ? ? ? ? ? ? ? 2.364 ? ? metalc24 metalc ? ? C CYS 54 SG ? ? ? 1_555 J ZN . ZN ? ? C CYS 421 C ZN 501 1_555 ? ? ? ? ? ? ? 2.331 ? ? metalc25 metalc ? ? D CYS 20 SG ? ? ? 1_555 M ZN . ZN ? ? D CYS 387 D ZN 502 1_555 ? ? ? ? ? ? ? 2.418 ? ? metalc26 metalc ? ? D CYS 23 SG ? ? ? 1_555 M ZN . ZN ? ? D CYS 390 D ZN 502 1_555 ? ? ? ? ? ? ? 2.291 ? ? metalc27 metalc ? ? D CYS 35 SG ? ? ? 1_555 L ZN . ZN ? ? D CYS 402 D ZN 501 1_555 ? ? ? ? ? ? ? 2.357 ? ? metalc28 metalc ? ? D HIS 37 ND1 ? ? ? 1_555 L ZN . ZN ? ? D HIS 404 D ZN 501 1_555 ? ? ? ? ? ? ? 2.044 ? ? metalc29 metalc ? ? D CYS 41 SG ? ? ? 1_555 M ZN . ZN ? ? D CYS 408 D ZN 502 1_555 ? ? ? ? ? ? ? 2.411 ? ? metalc30 metalc ? ? D CYS 44 SG ? ? ? 1_555 M ZN . ZN ? ? D CYS 411 D ZN 502 1_555 ? ? ? ? ? ? ? 2.362 ? ? metalc31 metalc ? ? D CYS 51 SG ? ? ? 1_555 L ZN . ZN ? ? D CYS 418 D ZN 501 1_555 ? ? ? ? ? ? ? 2.342 ? ? metalc32 metalc ? ? D CYS 54 SG ? ? ? 1_555 L ZN . ZN ? ? D CYS 421 D ZN 501 1_555 ? ? ? ? ? ? ? 2.321 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 20 ? A CYS 387 ? 1_555 ZN ? F ZN . ? A ZN 502 ? 1_555 SG ? A CYS 23 ? A CYS 390 ? 1_555 107.1 ? 2 SG ? A CYS 20 ? A CYS 387 ? 1_555 ZN ? F ZN . ? A ZN 502 ? 1_555 SG ? A CYS 41 ? A CYS 408 ? 1_555 113.1 ? 3 SG ? A CYS 23 ? A CYS 390 ? 1_555 ZN ? F ZN . ? A ZN 502 ? 1_555 SG ? A CYS 41 ? A CYS 408 ? 1_555 113.9 ? 4 SG ? A CYS 20 ? A CYS 387 ? 1_555 ZN ? F ZN . ? A ZN 502 ? 1_555 SG ? A CYS 44 ? A CYS 411 ? 1_555 103.7 ? 5 SG ? A CYS 23 ? A CYS 390 ? 1_555 ZN ? F ZN . ? A ZN 502 ? 1_555 SG ? A CYS 44 ? A CYS 411 ? 1_555 113.2 ? 6 SG ? A CYS 41 ? A CYS 408 ? 1_555 ZN ? F ZN . ? A ZN 502 ? 1_555 SG ? A CYS 44 ? A CYS 411 ? 1_555 105.6 ? 7 SG ? A CYS 35 ? A CYS 402 ? 1_555 ZN ? E ZN . ? A ZN 501 ? 1_555 ND1 ? A HIS 37 ? A HIS 404 ? 1_555 109.0 ? 8 SG ? A CYS 35 ? A CYS 402 ? 1_555 ZN ? E ZN . ? A ZN 501 ? 1_555 SG ? A CYS 51 ? A CYS 418 ? 1_555 107.4 ? 9 ND1 ? A HIS 37 ? A HIS 404 ? 1_555 ZN ? E ZN . ? A ZN 501 ? 1_555 SG ? A CYS 51 ? A CYS 418 ? 1_555 107.9 ? 10 SG ? A CYS 35 ? A CYS 402 ? 1_555 ZN ? E ZN . ? A ZN 501 ? 1_555 SG ? A CYS 54 ? A CYS 421 ? 1_555 110.3 ? 11 ND1 ? A HIS 37 ? A HIS 404 ? 1_555 ZN ? E ZN . ? A ZN 501 ? 1_555 SG ? A CYS 54 ? A CYS 421 ? 1_555 110.8 ? 12 SG ? A CYS 51 ? A CYS 418 ? 1_555 ZN ? E ZN . ? A ZN 501 ? 1_555 SG ? A CYS 54 ? A CYS 421 ? 1_555 111.2 ? 13 SG ? B CYS 20 ? B CYS 387 ? 1_555 ZN ? H ZN . ? B ZN 502 ? 1_555 SG ? B CYS 23 ? B CYS 390 ? 1_555 107.2 ? 14 SG ? B CYS 20 ? B CYS 387 ? 1_555 ZN ? H ZN . ? B ZN 502 ? 1_555 SG ? B CYS 41 ? B CYS 408 ? 1_555 115.0 ? 15 SG ? B CYS 23 ? B CYS 390 ? 1_555 ZN ? H ZN . ? B ZN 502 ? 1_555 SG ? B CYS 41 ? B CYS 408 ? 1_555 112.2 ? 16 SG ? B CYS 20 ? B CYS 387 ? 1_555 ZN ? H ZN . ? B ZN 502 ? 1_555 SG ? B CYS 44 ? B CYS 411 ? 1_555 103.5 ? 17 SG ? B CYS 23 ? B CYS 390 ? 1_555 ZN ? H ZN . ? B ZN 502 ? 1_555 SG ? B CYS 44 ? B CYS 411 ? 1_555 110.4 ? 18 SG ? B CYS 41 ? B CYS 408 ? 1_555 ZN ? H ZN . ? B ZN 502 ? 1_555 SG ? B CYS 44 ? B CYS 411 ? 1_555 108.3 ? 19 SG ? B CYS 35 ? B CYS 402 ? 1_555 ZN ? G ZN . ? B ZN 501 ? 1_555 ND1 ? B HIS 37 ? B HIS 404 ? 1_555 107.8 ? 20 SG ? B CYS 35 ? B CYS 402 ? 1_555 ZN ? G ZN . ? B ZN 501 ? 1_555 SG ? B CYS 51 ? B CYS 418 ? 1_555 109.2 ? 21 ND1 ? B HIS 37 ? B HIS 404 ? 1_555 ZN ? G ZN . ? B ZN 501 ? 1_555 SG ? B CYS 51 ? B CYS 418 ? 1_555 107.0 ? 22 SG ? B CYS 35 ? B CYS 402 ? 1_555 ZN ? G ZN . ? B ZN 501 ? 1_555 SG ? B CYS 54 ? B CYS 421 ? 1_555 110.8 ? 23 ND1 ? B HIS 37 ? B HIS 404 ? 1_555 ZN ? G ZN . ? B ZN 501 ? 1_555 SG ? B CYS 54 ? B CYS 421 ? 1_555 110.9 ? 24 SG ? B CYS 51 ? B CYS 418 ? 1_555 ZN ? G ZN . ? B ZN 501 ? 1_555 SG ? B CYS 54 ? B CYS 421 ? 1_555 111.1 ? 25 SG ? C CYS 20 ? C CYS 387 ? 1_555 ZN ? K ZN . ? C ZN 502 ? 1_555 SG ? C CYS 23 ? C CYS 390 ? 1_555 106.7 ? 26 SG ? C CYS 20 ? C CYS 387 ? 1_555 ZN ? K ZN . ? C ZN 502 ? 1_555 SG ? C CYS 41 ? C CYS 408 ? 1_555 113.6 ? 27 SG ? C CYS 23 ? C CYS 390 ? 1_555 ZN ? K ZN . ? C ZN 502 ? 1_555 SG ? C CYS 41 ? C CYS 408 ? 1_555 114.8 ? 28 SG ? C CYS 20 ? C CYS 387 ? 1_555 ZN ? K ZN . ? C ZN 502 ? 1_555 SG ? C CYS 44 ? C CYS 411 ? 1_555 104.0 ? 29 SG ? C CYS 23 ? C CYS 390 ? 1_555 ZN ? K ZN . ? C ZN 502 ? 1_555 SG ? C CYS 44 ? C CYS 411 ? 1_555 113.3 ? 30 SG ? C CYS 41 ? C CYS 408 ? 1_555 ZN ? K ZN . ? C ZN 502 ? 1_555 SG ? C CYS 44 ? C CYS 411 ? 1_555 104.0 ? 31 SG ? C CYS 35 ? C CYS 402 ? 1_555 ZN ? J ZN . ? C ZN 501 ? 1_555 ND1 ? C HIS 37 ? C HIS 404 ? 1_555 109.0 ? 32 SG ? C CYS 35 ? C CYS 402 ? 1_555 ZN ? J ZN . ? C ZN 501 ? 1_555 SG ? C CYS 51 ? C CYS 418 ? 1_555 108.0 ? 33 ND1 ? C HIS 37 ? C HIS 404 ? 1_555 ZN ? J ZN . ? C ZN 501 ? 1_555 SG ? C CYS 51 ? C CYS 418 ? 1_555 107.6 ? 34 SG ? C CYS 35 ? C CYS 402 ? 1_555 ZN ? J ZN . ? C ZN 501 ? 1_555 SG ? C CYS 54 ? C CYS 421 ? 1_555 110.6 ? 35 ND1 ? C HIS 37 ? C HIS 404 ? 1_555 ZN ? J ZN . ? C ZN 501 ? 1_555 SG ? C CYS 54 ? C CYS 421 ? 1_555 110.3 ? 36 SG ? C CYS 51 ? C CYS 418 ? 1_555 ZN ? J ZN . ? C ZN 501 ? 1_555 SG ? C CYS 54 ? C CYS 421 ? 1_555 111.3 ? 37 SG ? D CYS 20 ? D CYS 387 ? 1_555 ZN ? M ZN . ? D ZN 502 ? 1_555 SG ? D CYS 23 ? D CYS 390 ? 1_555 107.1 ? 38 SG ? D CYS 20 ? D CYS 387 ? 1_555 ZN ? M ZN . ? D ZN 502 ? 1_555 SG ? D CYS 41 ? D CYS 408 ? 1_555 114.6 ? 39 SG ? D CYS 23 ? D CYS 390 ? 1_555 ZN ? M ZN . ? D ZN 502 ? 1_555 SG ? D CYS 41 ? D CYS 408 ? 1_555 111.6 ? 40 SG ? D CYS 20 ? D CYS 387 ? 1_555 ZN ? M ZN . ? D ZN 502 ? 1_555 SG ? D CYS 44 ? D CYS 411 ? 1_555 104.5 ? 41 SG ? D CYS 23 ? D CYS 390 ? 1_555 ZN ? M ZN . ? D ZN 502 ? 1_555 SG ? D CYS 44 ? D CYS 411 ? 1_555 111.2 ? 42 SG ? D CYS 41 ? D CYS 408 ? 1_555 ZN ? M ZN . ? D ZN 502 ? 1_555 SG ? D CYS 44 ? D CYS 411 ? 1_555 107.7 ? 43 SG ? D CYS 35 ? D CYS 402 ? 1_555 ZN ? L ZN . ? D ZN 501 ? 1_555 ND1 ? D HIS 37 ? D HIS 404 ? 1_555 107.7 ? 44 SG ? D CYS 35 ? D CYS 402 ? 1_555 ZN ? L ZN . ? D ZN 501 ? 1_555 SG ? D CYS 51 ? D CYS 418 ? 1_555 106.4 ? 45 ND1 ? D HIS 37 ? D HIS 404 ? 1_555 ZN ? L ZN . ? D ZN 501 ? 1_555 SG ? D CYS 51 ? D CYS 418 ? 1_555 108.8 ? 46 SG ? D CYS 35 ? D CYS 402 ? 1_555 ZN ? L ZN . ? D ZN 501 ? 1_555 SG ? D CYS 54 ? D CYS 421 ? 1_555 110.1 ? 47 ND1 ? D HIS 37 ? D HIS 404 ? 1_555 ZN ? L ZN . ? D ZN 501 ? 1_555 SG ? D CYS 54 ? D CYS 421 ? 1_555 111.6 ? 48 SG ? D CYS 51 ? D CYS 418 ? 1_555 ZN ? L ZN . ? D ZN 501 ? 1_555 SG ? D CYS 54 ? D CYS 421 ? 1_555 112.0 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 CYS 33 A . ? CYS 400 A PRO 34 A ? PRO 401 A 1 7.81 2 CYS 33 B . ? CYS 400 B PRO 34 B ? PRO 401 B 1 8.47 3 CYS 33 C . ? CYS 400 C PRO 34 C ? PRO 401 C 1 6.19 4 CYS 33 D . ? CYS 400 D PRO 34 D ? PRO 401 D 1 3.30 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 30 ? CYS A 33 ? SER A 397 CYS A 400 AA1 2 HIS A 60 ? HIS A 63 ? HIS A 427 HIS A 430 AA2 1 SER B 30 ? CYS B 33 ? SER B 397 CYS B 400 AA2 2 HIS B 60 ? HIS B 63 ? HIS B 427 HIS B 430 AA3 1 SER C 30 ? CYS C 33 ? SER C 397 CYS C 400 AA3 2 HIS C 60 ? HIS C 63 ? HIS C 427 HIS C 430 AA4 1 SER D 30 ? CYS D 33 ? SER D 397 CYS D 400 AA4 2 HIS D 60 ? HIS D 63 ? HIS D 427 HIS D 430 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N CYS A 33 ? N CYS A 400 O HIS A 60 ? O HIS A 427 AA2 1 2 N THR B 31 ? N THR B 398 O GLN B 62 ? O GLN B 429 AA3 1 2 N CYS C 33 ? N CYS C 400 O HIS C 60 ? O HIS C 427 AA4 1 2 N THR D 31 ? N THR D 398 O GLN D 62 ? O GLN D 429 # _pdbx_entry_details.entry_id 13SD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 655 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 665 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 396 ? ? -151.73 21.63 2 1 ASN B 396 ? ? -152.30 19.26 3 1 ASN C 396 ? ? -152.85 21.76 4 1 ASN D 396 ? ? -151.70 19.00 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -24.0832 9.1509 15.6244 -0.0438 0.0306 0.0262 -0.0000 -0.0163 0.0278 0.0929 0.3437 0.6102 0.0820 -0.2289 -0.3485 0.0034 0.0139 -0.0173 0.0762 0.1134 0.0614 0.0346 0.0262 -0.0392 'X-RAY DIFFRACTION' 2 ? refined -9.8495 13.0323 15.4612 -0.0286 0.0213 0.0004 -0.0016 0.0000 0.0168 0.3809 0.1974 0.8217 -0.1238 0.5459 -0.1460 -0.0049 -0.0204 0.0253 0.1040 0.0987 -0.0085 0.0350 -0.0073 0.0733 'X-RAY DIFFRACTION' 3 ? refined 1.7407 -8.0150 17.4703 -0.0375 0.0226 0.0154 -0.0071 0.0056 -0.0094 0.3227 0.2858 0.5257 -0.0321 0.3782 0.1676 -0.0262 0.0212 0.0050 0.0824 -0.0685 -0.0185 0.0403 0.0079 0.0561 'X-RAY DIFFRACTION' 4 ? refined -12.6739 -12.4698 17.2909 -0.0310 0.0037 0.0173 -0.0060 -0.0066 -0.0097 0.9615 0.0520 0.5784 -0.2293 -0.8273 -0.1835 -0.0479 -0.0526 0.1006 0.0907 -0.1814 0.0459 0.0041 0.0029 -0.0970 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 368 A 443 '{ A|* }' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 368 B 435 '{ B|* }' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 368 C 436 '{ C|* }' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 D 368 D 436 '{ D|* }' ? ? ? ? ? # _phasing.method MR # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id B _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 681 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.94 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 444 ? A VAL 77 2 1 Y 1 A ILE 445 ? A ILE 78 3 1 Y 1 B HIS 436 ? B HIS 69 4 1 Y 1 B THR 437 ? B THR 70 5 1 Y 1 B SER 438 ? B SER 71 6 1 Y 1 B LEU 439 ? B LEU 72 7 1 Y 1 B LEU 440 ? B LEU 73 8 1 Y 1 B ASN 441 ? B ASN 74 9 1 Y 1 B LEU 442 ? B LEU 75 10 1 Y 1 B THR 443 ? B THR 76 11 1 Y 1 B VAL 444 ? B VAL 77 12 1 Y 1 B ILE 445 ? B ILE 78 13 1 Y 1 C THR 437 ? C THR 70 14 1 Y 1 C SER 438 ? C SER 71 15 1 Y 1 C LEU 439 ? C LEU 72 16 1 Y 1 C LEU 440 ? C LEU 73 17 1 Y 1 C ASN 441 ? C ASN 74 18 1 Y 1 C LEU 442 ? C LEU 75 19 1 Y 1 C THR 443 ? C THR 76 20 1 Y 1 C VAL 444 ? C VAL 77 21 1 Y 1 C ILE 445 ? C ILE 78 22 1 Y 1 D THR 437 ? D THR 70 23 1 Y 1 D SER 438 ? D SER 71 24 1 Y 1 D LEU 439 ? D LEU 72 25 1 Y 1 D LEU 440 ? D LEU 73 26 1 Y 1 D ASN 441 ? D ASN 74 27 1 Y 1 D LEU 442 ? D LEU 75 28 1 Y 1 D THR 443 ? D THR 76 29 1 Y 1 D VAL 444 ? D VAL 77 30 1 Y 1 D ILE 445 ? D ILE 78 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1CYB C1 C N N 1 A1CYB C2 C N N 2 A1CYB C3 C Y N 3 A1CYB N1 N Y N 4 A1CYB O1 O Y N 5 A1CYB C4 C Y N 6 A1CYB C5 C N N 7 A1CYB C6 C Y N 8 A1CYB C7 C N N 9 A1CYB N2 N Y N 10 A1CYB C8 C Y N 11 A1CYB C9 C Y N 12 A1CYB C10 C Y N 13 A1CYB C11 C N N 14 A1CYB N3 N Y N 15 A1CYB H1 H N N 16 A1CYB H2 H N N 17 A1CYB H3 H N N 18 A1CYB H4 H N N 19 A1CYB H5 H N N 20 A1CYB H6 H N N 21 A1CYB H7 H N N 22 A1CYB H8 H N N 23 A1CYB H9 H N N 24 A1CYB H10 H N N 25 A1CYB H11 H N N 26 A1CYB H12 H N N 27 A1CYB H13 H N N 28 A1CYB H14 H N N 29 A1CYB H15 H N N 30 ALA N N N N 31 ALA CA C N S 32 ALA C C N N 33 ALA O O N N 34 ALA CB C N N 35 ALA OXT O N N 36 ALA H H N N 37 ALA H2 H N N 38 ALA HA H N N 39 ALA HB1 H N N 40 ALA HB2 H N N 41 ALA HB3 H N N 42 ALA HXT H N N 43 ARG N N N N 44 ARG CA C N S 45 ARG C C N N 46 ARG O O N N 47 ARG CB C N N 48 ARG CG C N N 49 ARG CD C N N 50 ARG NE N N N 51 ARG CZ C N N 52 ARG NH1 N N N 53 ARG NH2 N N N 54 ARG OXT O N N 55 ARG H H N N 56 ARG H2 H N N 57 ARG HA H N N 58 ARG HB2 H N N 59 ARG HB3 H N N 60 ARG HG2 H N N 61 ARG HG3 H N N 62 ARG HD2 H N N 63 ARG HD3 H N N 64 ARG HE H N N 65 ARG HH11 H N N 66 ARG HH12 H N N 67 ARG HH21 H N N 68 ARG HH22 H N N 69 ARG HXT H N N 70 ASN N N N N 71 ASN CA C N S 72 ASN C C N N 73 ASN O O N N 74 ASN CB C N N 75 ASN CG C N N 76 ASN OD1 O N N 77 ASN ND2 N N N 78 ASN OXT O N N 79 ASN H H N N 80 ASN H2 H N N 81 ASN HA H N N 82 ASN HB2 H N N 83 ASN HB3 H N N 84 ASN HD21 H N N 85 ASN HD22 H N N 86 ASN HXT H N N 87 CYS N N N N 88 CYS CA C N R 89 CYS C C N N 90 CYS O O N N 91 CYS CB C N N 92 CYS SG S N N 93 CYS OXT O N N 94 CYS H H N N 95 CYS H2 H N N 96 CYS HA H N N 97 CYS HB2 H N N 98 CYS HB3 H N N 99 CYS HG H N N 100 CYS HXT H N N 101 GLN N N N N 102 GLN CA C N S 103 GLN C C N N 104 GLN O O N N 105 GLN CB C N N 106 GLN CG C N N 107 GLN CD C N N 108 GLN OE1 O N N 109 GLN NE2 N N N 110 GLN OXT O N N 111 GLN H H N N 112 GLN H2 H N N 113 GLN HA H N N 114 GLN HB2 H N N 115 GLN HB3 H N N 116 GLN HG2 H N N 117 GLN HG3 H N N 118 GLN HE21 H N N 119 GLN HE22 H N N 120 GLN HXT H N N 121 GLU N N N N 122 GLU CA C N S 123 GLU C C N N 124 GLU O O N N 125 GLU CB C N N 126 GLU CG C N N 127 GLU CD C N N 128 GLU OE1 O N N 129 GLU OE2 O N N 130 GLU OXT O N N 131 GLU H H N N 132 GLU H2 H N N 133 GLU HA H N N 134 GLU HB2 H N N 135 GLU HB3 H N N 136 GLU HG2 H N N 137 GLU HG3 H N N 138 GLU HE2 H N N 139 GLU HXT H N N 140 GLY N N N N 141 GLY CA C N N 142 GLY C C N N 143 GLY O O N N 144 GLY OXT O N N 145 GLY H H N N 146 GLY H2 H N N 147 GLY HA2 H N N 148 GLY HA3 H N N 149 GLY HXT H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 PHE N N N N 264 PHE CA C N S 265 PHE C C N N 266 PHE O O N N 267 PHE CB C N N 268 PHE CG C Y N 269 PHE CD1 C Y N 270 PHE CD2 C Y N 271 PHE CE1 C Y N 272 PHE CE2 C Y N 273 PHE CZ C Y N 274 PHE OXT O N N 275 PHE H H N N 276 PHE H2 H N N 277 PHE HA H N N 278 PHE HB2 H N N 279 PHE HB3 H N N 280 PHE HD1 H N N 281 PHE HD2 H N N 282 PHE HE1 H N N 283 PHE HE2 H N N 284 PHE HZ H N N 285 PHE HXT H N N 286 PRO N N N N 287 PRO CA C N S 288 PRO C C N N 289 PRO O O N N 290 PRO CB C N N 291 PRO CG C N N 292 PRO CD C N N 293 PRO OXT O N N 294 PRO H H N N 295 PRO HA H N N 296 PRO HB2 H N N 297 PRO HB3 H N N 298 PRO HG2 H N N 299 PRO HG3 H N N 300 PRO HD2 H N N 301 PRO HD3 H N N 302 PRO HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 THR N N N N 318 THR CA C N S 319 THR C C N N 320 THR O O N N 321 THR CB C N R 322 THR OG1 O N N 323 THR CG2 C N N 324 THR OXT O N N 325 THR H H N N 326 THR H2 H N N 327 THR HA H N N 328 THR HB H N N 329 THR HG1 H N N 330 THR HG21 H N N 331 THR HG22 H N N 332 THR HG23 H N N 333 THR HXT H N N 334 TYR N N N N 335 TYR CA C N S 336 TYR C C N N 337 TYR O O N N 338 TYR CB C N N 339 TYR CG C Y N 340 TYR CD1 C Y N 341 TYR CD2 C Y N 342 TYR CE1 C Y N 343 TYR CE2 C Y N 344 TYR CZ C Y N 345 TYR OH O N N 346 TYR OXT O N N 347 TYR H H N N 348 TYR H2 H N N 349 TYR HA H N N 350 TYR HB2 H N N 351 TYR HB3 H N N 352 TYR HD1 H N N 353 TYR HD2 H N N 354 TYR HE1 H N N 355 TYR HE2 H N N 356 TYR HH H N N 357 TYR HXT H N N 358 VAL N N N N 359 VAL CA C N S 360 VAL C C N N 361 VAL O O N N 362 VAL CB C N N 363 VAL CG1 C N N 364 VAL CG2 C N N 365 VAL OXT O N N 366 VAL H H N N 367 VAL H2 H N N 368 VAL HA H N N 369 VAL HB H N N 370 VAL HG11 H N N 371 VAL HG12 H N N 372 VAL HG13 H N N 373 VAL HG21 H N N 374 VAL HG22 H N N 375 VAL HG23 H N N 376 VAL HXT H N N 377 ZN ZN ZN N N 378 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CYB C5 C4 sing N N 1 A1CYB C4 O1 sing Y N 2 A1CYB C4 C6 doub Y N 3 A1CYB O1 N1 sing Y N 4 A1CYB C7 C6 sing N N 5 A1CYB C7 N2 sing N N 6 A1CYB C6 C3 sing Y N 7 A1CYB N2 N3 sing Y N 8 A1CYB N2 C8 sing Y N 9 A1CYB N3 C10 doub Y N 10 A1CYB N1 C3 doub Y N 11 A1CYB C3 C2 sing N N 12 A1CYB C8 C9 doub Y N 13 A1CYB C10 C11 sing N N 14 A1CYB C10 C9 sing Y N 15 A1CYB C2 C1 sing N N 16 A1CYB C1 H1 sing N N 17 A1CYB C1 H2 sing N N 18 A1CYB C1 H3 sing N N 19 A1CYB C2 H4 sing N N 20 A1CYB C2 H5 sing N N 21 A1CYB C5 H6 sing N N 22 A1CYB C5 H7 sing N N 23 A1CYB C5 H8 sing N N 24 A1CYB C7 H9 sing N N 25 A1CYB C7 H10 sing N N 26 A1CYB C8 H11 sing N N 27 A1CYB C9 H12 sing N N 28 A1CYB C11 H13 sing N N 29 A1CYB C11 H14 sing N N 30 A1CYB C11 H15 sing N N 31 ALA N CA sing N N 32 ALA N H sing N N 33 ALA N H2 sing N N 34 ALA CA C sing N N 35 ALA CA CB sing N N 36 ALA CA HA sing N N 37 ALA C O doub N N 38 ALA C OXT sing N N 39 ALA CB HB1 sing N N 40 ALA CB HB2 sing N N 41 ALA CB HB3 sing N N 42 ALA OXT HXT sing N N 43 ARG N CA sing N N 44 ARG N H sing N N 45 ARG N H2 sing N N 46 ARG CA C sing N N 47 ARG CA CB sing N N 48 ARG CA HA sing N N 49 ARG C O doub N N 50 ARG C OXT sing N N 51 ARG CB CG sing N N 52 ARG CB HB2 sing N N 53 ARG CB HB3 sing N N 54 ARG CG CD sing N N 55 ARG CG HG2 sing N N 56 ARG CG HG3 sing N N 57 ARG CD NE sing N N 58 ARG CD HD2 sing N N 59 ARG CD HD3 sing N N 60 ARG NE CZ sing N N 61 ARG NE HE sing N N 62 ARG CZ NH1 sing N N 63 ARG CZ NH2 doub N N 64 ARG NH1 HH11 sing N N 65 ARG NH1 HH12 sing N N 66 ARG NH2 HH21 sing N N 67 ARG NH2 HH22 sing N N 68 ARG OXT HXT sing N N 69 ASN N CA sing N N 70 ASN N H sing N N 71 ASN N H2 sing N N 72 ASN CA C sing N N 73 ASN CA CB sing N N 74 ASN CA HA sing N N 75 ASN C O doub N N 76 ASN C OXT sing N N 77 ASN CB CG sing N N 78 ASN CB HB2 sing N N 79 ASN CB HB3 sing N N 80 ASN CG OD1 doub N N 81 ASN CG ND2 sing N N 82 ASN ND2 HD21 sing N N 83 ASN ND2 HD22 sing N N 84 ASN OXT HXT sing N N 85 CYS N CA sing N N 86 CYS N H sing N N 87 CYS N H2 sing N N 88 CYS CA C sing N N 89 CYS CA CB sing N N 90 CYS CA HA sing N N 91 CYS C O doub N N 92 CYS C OXT sing N N 93 CYS CB SG sing N N 94 CYS CB HB2 sing N N 95 CYS CB HB3 sing N N 96 CYS SG HG sing N N 97 CYS OXT HXT sing N N 98 GLN N CA sing N N 99 GLN N H sing N N 100 GLN N H2 sing N N 101 GLN CA C sing N N 102 GLN CA CB sing N N 103 GLN CA HA sing N N 104 GLN C O doub N N 105 GLN C OXT sing N N 106 GLN CB CG sing N N 107 GLN CB HB2 sing N N 108 GLN CB HB3 sing N N 109 GLN CG CD sing N N 110 GLN CG HG2 sing N N 111 GLN CG HG3 sing N N 112 GLN CD OE1 doub N N 113 GLN CD NE2 sing N N 114 GLN NE2 HE21 sing N N 115 GLN NE2 HE22 sing N N 116 GLN OXT HXT sing N N 117 GLU N CA sing N N 118 GLU N H sing N N 119 GLU N H2 sing N N 120 GLU CA C sing N N 121 GLU CA CB sing N N 122 GLU CA HA sing N N 123 GLU C O doub N N 124 GLU C OXT sing N N 125 GLU CB CG sing N N 126 GLU CB HB2 sing N N 127 GLU CB HB3 sing N N 128 GLU CG CD sing N N 129 GLU CG HG2 sing N N 130 GLU CG HG3 sing N N 131 GLU CD OE1 doub N N 132 GLU CD OE2 sing N N 133 GLU OE2 HE2 sing N N 134 GLU OXT HXT sing N N 135 GLY N CA sing N N 136 GLY N H sing N N 137 GLY N H2 sing N N 138 GLY CA C sing N N 139 GLY CA HA2 sing N N 140 GLY CA HA3 sing N N 141 GLY C O doub N N 142 GLY C OXT sing N N 143 GLY OXT HXT sing N N 144 HIS N CA sing N N 145 HIS N H sing N N 146 HIS N H2 sing N N 147 HIS CA C sing N N 148 HIS CA CB sing N N 149 HIS CA HA sing N N 150 HIS C O doub N N 151 HIS C OXT sing N N 152 HIS CB CG sing N N 153 HIS CB HB2 sing N N 154 HIS CB HB3 sing N N 155 HIS CG ND1 sing Y N 156 HIS CG CD2 doub Y N 157 HIS ND1 CE1 doub Y N 158 HIS ND1 HD1 sing N N 159 HIS CD2 NE2 sing Y N 160 HIS CD2 HD2 sing N N 161 HIS CE1 NE2 sing Y N 162 HIS CE1 HE1 sing N N 163 HIS NE2 HE2 sing N N 164 HIS OXT HXT sing N N 165 HOH O H1 sing N N 166 HOH O H2 sing N N 167 ILE N CA sing N N 168 ILE N H sing N N 169 ILE N H2 sing N N 170 ILE CA C sing N N 171 ILE CA CB sing N N 172 ILE CA HA sing N N 173 ILE C O doub N N 174 ILE C OXT sing N N 175 ILE CB CG1 sing N N 176 ILE CB CG2 sing N N 177 ILE CB HB sing N N 178 ILE CG1 CD1 sing N N 179 ILE CG1 HG12 sing N N 180 ILE CG1 HG13 sing N N 181 ILE CG2 HG21 sing N N 182 ILE CG2 HG22 sing N N 183 ILE CG2 HG23 sing N N 184 ILE CD1 HD11 sing N N 185 ILE CD1 HD12 sing N N 186 ILE CD1 HD13 sing N N 187 ILE OXT HXT sing N N 188 LEU N CA sing N N 189 LEU N H sing N N 190 LEU N H2 sing N N 191 LEU CA C sing N N 192 LEU CA CB sing N N 193 LEU CA HA sing N N 194 LEU C O doub N N 195 LEU C OXT sing N N 196 LEU CB CG sing N N 197 LEU CB HB2 sing N N 198 LEU CB HB3 sing N N 199 LEU CG CD1 sing N N 200 LEU CG CD2 sing N N 201 LEU CG HG sing N N 202 LEU CD1 HD11 sing N N 203 LEU CD1 HD12 sing N N 204 LEU CD1 HD13 sing N N 205 LEU CD2 HD21 sing N N 206 LEU CD2 HD22 sing N N 207 LEU CD2 HD23 sing N N 208 LEU OXT HXT sing N N 209 LYS N CA sing N N 210 LYS N H sing N N 211 LYS N H2 sing N N 212 LYS CA C sing N N 213 LYS CA CB sing N N 214 LYS CA HA sing N N 215 LYS C O doub N N 216 LYS C OXT sing N N 217 LYS CB CG sing N N 218 LYS CB HB2 sing N N 219 LYS CB HB3 sing N N 220 LYS CG CD sing N N 221 LYS CG HG2 sing N N 222 LYS CG HG3 sing N N 223 LYS CD CE sing N N 224 LYS CD HD2 sing N N 225 LYS CD HD3 sing N N 226 LYS CE NZ sing N N 227 LYS CE HE2 sing N N 228 LYS CE HE3 sing N N 229 LYS NZ HZ1 sing N N 230 LYS NZ HZ2 sing N N 231 LYS NZ HZ3 sing N N 232 LYS OXT HXT sing N N 233 MET N CA sing N N 234 MET N H sing N N 235 MET N H2 sing N N 236 MET CA C sing N N 237 MET CA CB sing N N 238 MET CA HA sing N N 239 MET C O doub N N 240 MET C OXT sing N N 241 MET CB CG sing N N 242 MET CB HB2 sing N N 243 MET CB HB3 sing N N 244 MET CG SD sing N N 245 MET CG HG2 sing N N 246 MET CG HG3 sing N N 247 MET SD CE sing N N 248 MET CE HE1 sing N N 249 MET CE HE2 sing N N 250 MET CE HE3 sing N N 251 MET OXT HXT sing N N 252 PHE N CA sing N N 253 PHE N H sing N N 254 PHE N H2 sing N N 255 PHE CA C sing N N 256 PHE CA CB sing N N 257 PHE CA HA sing N N 258 PHE C O doub N N 259 PHE C OXT sing N N 260 PHE CB CG sing N N 261 PHE CB HB2 sing N N 262 PHE CB HB3 sing N N 263 PHE CG CD1 doub Y N 264 PHE CG CD2 sing Y N 265 PHE CD1 CE1 sing Y N 266 PHE CD1 HD1 sing N N 267 PHE CD2 CE2 doub Y N 268 PHE CD2 HD2 sing N N 269 PHE CE1 CZ doub Y N 270 PHE CE1 HE1 sing N N 271 PHE CE2 CZ sing Y N 272 PHE CE2 HE2 sing N N 273 PHE CZ HZ sing N N 274 PHE OXT HXT sing N N 275 PRO N CA sing N N 276 PRO N CD sing N N 277 PRO N H sing N N 278 PRO CA C sing N N 279 PRO CA CB sing N N 280 PRO CA HA sing N N 281 PRO C O doub N N 282 PRO C OXT sing N N 283 PRO CB CG sing N N 284 PRO CB HB2 sing N N 285 PRO CB HB3 sing N N 286 PRO CG CD sing N N 287 PRO CG HG2 sing N N 288 PRO CG HG3 sing N N 289 PRO CD HD2 sing N N 290 PRO CD HD3 sing N N 291 PRO OXT HXT sing N N 292 SER N CA sing N N 293 SER N H sing N N 294 SER N H2 sing N N 295 SER CA C sing N N 296 SER CA CB sing N N 297 SER CA HA sing N N 298 SER C O doub N N 299 SER C OXT sing N N 300 SER CB OG sing N N 301 SER CB HB2 sing N N 302 SER CB HB3 sing N N 303 SER OG HG sing N N 304 SER OXT HXT sing N N 305 THR N CA sing N N 306 THR N H sing N N 307 THR N H2 sing N N 308 THR CA C sing N N 309 THR CA CB sing N N 310 THR CA HA sing N N 311 THR C O doub N N 312 THR C OXT sing N N 313 THR CB OG1 sing N N 314 THR CB CG2 sing N N 315 THR CB HB sing N N 316 THR OG1 HG1 sing N N 317 THR CG2 HG21 sing N N 318 THR CG2 HG22 sing N N 319 THR CG2 HG23 sing N N 320 THR OXT HXT sing N N 321 TYR N CA sing N N 322 TYR N H sing N N 323 TYR N H2 sing N N 324 TYR CA C sing N N 325 TYR CA CB sing N N 326 TYR CA HA sing N N 327 TYR C O doub N N 328 TYR C OXT sing N N 329 TYR CB CG sing N N 330 TYR CB HB2 sing N N 331 TYR CB HB3 sing N N 332 TYR CG CD1 doub Y N 333 TYR CG CD2 sing Y N 334 TYR CD1 CE1 sing Y N 335 TYR CD1 HD1 sing N N 336 TYR CD2 CE2 doub Y N 337 TYR CD2 HD2 sing N N 338 TYR CE1 CZ doub Y N 339 TYR CE1 HE1 sing N N 340 TYR CE2 CZ sing Y N 341 TYR CE2 HE2 sing N N 342 TYR CZ OH sing N N 343 TYR OH HH sing N N 344 TYR OXT HXT sing N N 345 VAL N CA sing N N 346 VAL N H sing N N 347 VAL N H2 sing N N 348 VAL CA C sing N N 349 VAL CA CB sing N N 350 VAL CA HA sing N N 351 VAL C O doub N N 352 VAL C OXT sing N N 353 VAL CB CG1 sing N N 354 VAL CB CG2 sing N N 355 VAL CB HB sing N N 356 VAL CG1 HG11 sing N N 357 VAL CG1 HG12 sing N N 358 VAL CG1 HG13 sing N N 359 VAL CG2 HG21 sing N N 360 VAL CG2 HG22 sing N N 361 VAL CG2 HG23 sing N N 362 VAL OXT HXT sing N N 363 # loop_ _pdbx_audit_support.ordinal _pdbx_audit_support.funding_organization _pdbx_audit_support.grant_number _pdbx_audit_support.country 1 'Alzheimers Research UK (ARUK)' ARUK2018DDI-OX 'United Kingdom' 2 'Alzheimers Research UK (ARUK)' 520909 'United Kingdom' # _pdbx_deposit_group.group_id G_1002355 _pdbx_deposit_group.group_description ;RING domain of human E3 ligase IDOL screened against Fragment Libraries by X-ray Crystallography at the XChem facility of Diamond Light Source beamline I04-1 ; _pdbx_deposit_group.group_title 'PanDDA analysis group deposition' _pdbx_deposit_group.group_type 'changed state' # _pdbx_initial_refinement_model.accession_code 9SA2 _pdbx_initial_refinement_model.details ? _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.type 'experimental model' # _atom_sites.entry_id 13SD _atom_sites.fract_transf_matrix[1][1] 0.022364 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000347 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020756 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014152 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ # loop_ #