data_143D # _entry.id 143D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 143D pdb_0000143d 10.2210/pdb143d/pdb WWPDB D_1000170100 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-04-30 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 5 'Structure model' 1 4 2023-03-29 6 'Structure model' 1 5 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other 6 5 'Structure model' Advisory 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Source and taxonomy' 9 6 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 5 'Structure model' database_PDB_caveat 6 5 'Structure model' ndb_struct_na_base_pair 7 5 'Structure model' ndb_struct_na_base_pair_step 8 5 'Structure model' pdbx_entity_src_syn 9 5 'Structure model' struct_conn 10 6 'Structure model' chem_comp_atom 11 6 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 5 'Structure model' '_ndb_struct_na_base_pair_step.helical_rise' 5 5 'Structure model' '_ndb_struct_na_base_pair_step.helical_twist' 6 5 'Structure model' '_ndb_struct_na_base_pair_step.i_auth_seq_id_1' 7 5 'Structure model' '_ndb_struct_na_base_pair_step.i_auth_seq_id_2' 8 5 'Structure model' '_ndb_struct_na_base_pair_step.i_label_comp_id_1' 9 5 'Structure model' '_ndb_struct_na_base_pair_step.i_label_comp_id_2' 10 5 'Structure model' '_ndb_struct_na_base_pair_step.i_label_seq_id_1' 11 5 'Structure model' '_ndb_struct_na_base_pair_step.i_label_seq_id_2' 12 5 'Structure model' '_ndb_struct_na_base_pair_step.inclination' 13 5 'Structure model' '_ndb_struct_na_base_pair_step.j_auth_seq_id_1' 14 5 'Structure model' '_ndb_struct_na_base_pair_step.j_auth_seq_id_2' 15 5 'Structure model' '_ndb_struct_na_base_pair_step.j_label_comp_id_1' 16 5 'Structure model' '_ndb_struct_na_base_pair_step.j_label_comp_id_2' 17 5 'Structure model' '_ndb_struct_na_base_pair_step.j_label_seq_id_1' 18 5 'Structure model' '_ndb_struct_na_base_pair_step.j_label_seq_id_2' 19 5 'Structure model' '_ndb_struct_na_base_pair_step.rise' 20 5 'Structure model' '_ndb_struct_na_base_pair_step.roll' 21 5 'Structure model' '_ndb_struct_na_base_pair_step.shift' 22 5 'Structure model' '_ndb_struct_na_base_pair_step.slide' 23 5 'Structure model' '_ndb_struct_na_base_pair_step.step_name' 24 5 'Structure model' '_ndb_struct_na_base_pair_step.tilt' 25 5 'Structure model' '_ndb_struct_na_base_pair_step.tip' 26 5 'Structure model' '_ndb_struct_na_base_pair_step.twist' 27 5 'Structure model' '_ndb_struct_na_base_pair_step.x_displacement' 28 5 'Structure model' '_ndb_struct_na_base_pair_step.y_displacement' 29 5 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 30 5 'Structure model' '_pdbx_entity_src_syn.organism_scientific' # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 ;DG A 3 HAS WRONG CHIRALITY AT ATOM C4' ; 2 ;DG A 3 HAS WRONG CHIRALITY AT ATOM C3' ; 3 ;DG A 10 HAS WRONG CHIRALITY AT ATOM C3' ; 4 ;DT A 11 HAS WRONG CHIRALITY AT ATOM C3' ; 5 ;DT A 11 HAS WRONG CHIRALITY AT ATOM C1' ; 6 ;DA A 13 HAS WRONG CHIRALITY AT ATOM C3' ; 7 ;DG A 2 HAS WRONG CHIRALITY AT ATOM C4' ; 8 ;DG A 4 HAS WRONG CHIRALITY AT ATOM C4' ; 9 ;DG A 10 HAS WRONG CHIRALITY AT ATOM C4' ; 10 ;DA A 1 HAS WRONG CHIRALITY AT ATOM C4' ; 11 ;DG A 21 HAS WRONG CHIRALITY AT ATOM C4' ; 12 ;DT A 5 HAS WRONG CHIRALITY AT ATOM C1' ; 13 ;DT A 6 HAS WRONG CHIRALITY AT ATOM C3' ; 14 ;DA A 13 HAS WRONG CHIRALITY AT ATOM C1' ; 15 ;DT A 17 HAS WRONG CHIRALITY AT ATOM C1' ; # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 143D _pdbx_database_status.recvd_initial_deposition_date 1993-10-08 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 201D 'ENSEMBLE OF 6 STRUCTURES' unspecified PDB 179D . unspecified PDB 186D . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, Y.' 1 'Patel, D.J.' 2 # _citation.id primary _citation.title 'Solution structure of the human telomeric repeat d[AG3(T2AG3)3] G-tetraplex.' _citation.journal_abbrev Structure _citation.journal_volume 1 _citation.page_first 263 _citation.page_last 282 _citation.year 1993 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 8081740 _citation.pdbx_database_id_DOI '10.1016/0969-2126(93)90015-9' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, Y.' 1 ? primary 'Patel, D.J.' 2 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3') ; _entity.formula_weight 6983.497 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG) (DG)(DG) ; _entity_poly.pdbx_seq_one_letter_code_can AGGGTTAGGGTTAGGGTTAGGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DG n 1 3 DG n 1 4 DG n 1 5 DT n 1 6 DT n 1 7 DA n 1 8 DG n 1 9 DG n 1 10 DG n 1 11 DT n 1 12 DT n 1 13 DA n 1 14 DG n 1 15 DG n 1 16 DG n 1 17 DT n 1 18 DT n 1 19 DA n 1 20 DG n 1 21 DG n 1 22 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'CHEMICALLY SYNTHESIZED' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA A A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DT 6 6 6 DT T A . n A 1 7 DA 7 7 7 DA A A . n A 1 8 DG 8 8 8 DG G A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n A 1 11 DT 11 11 11 DT T A . n A 1 12 DT 12 12 12 DT T A . n A 1 13 DA 13 13 13 DA A A . n A 1 14 DG 14 14 14 DG G A . n A 1 15 DG 15 15 15 DG G A . n A 1 16 DG 16 16 16 DG G A . n A 1 17 DT 17 17 17 DT T A . n A 1 18 DT 18 18 18 DT T A . n A 1 19 DA 19 19 19 DA A A . n A 1 20 DG 20 20 20 DG G A . n A 1 21 DG 21 21 21 DG G A . n A 1 22 DG 22 22 22 DG G A . n # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # _cell.entry_id 143D _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 143D _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 143D _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 143D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 143D _struct.title 'SOLUTION STRUCTURE OF THE HUMAN TELOMERIC REPEAT D(AG3[T2AG3]3) OF THE G-QUADRUPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 143D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DNA, HUMAN TELOMERIC SEQUENCE, AG3 REPEAT' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 143D _struct_ref.pdbx_db_accession 143D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 143D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 143D _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 22 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 1 N6 ? ? ? 1_555 A DG 10 O6 ? ? A DA 1 A DG 10 1_555 ? ? ? ? ? ? 'DA-DG MISPAIR' ? ? ? hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 A DA 13 N7 ? ? A DA 1 A DA 13 1_555 ? ? ? ? ? ? 'DA-DA MISPAIR' ? ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 2 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 2 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 14 N2 ? ? A DG 2 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG 14 N1 ? ? A DG 2 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 9 N2 ? ? A DG 3 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 9 N1 ? ? A DG 3 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 3 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 3 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 8 O6 ? ? A DG 4 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 8 N7 ? ? A DG 4 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 4 N7 ? ? ? 1_555 A DG 16 N2 ? ? A DG 4 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DG 16 N1 ? ? A DG 4 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DT 6 N3 ? ? ? 1_555 A DA 19 N1 ? ? A DT 6 A DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 6 O4 ? ? ? 1_555 A DA 19 N6 ? ? A DT 6 A DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DG 20 O6 ? ? A DG 8 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 20 N7 ? ? A DG 8 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 9 N7 ? ? ? 1_555 A DG 21 N2 ? ? A DG 9 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DG 21 N1 ? ? A DG 9 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 22 O6 ? ? A DG 10 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 22 N7 ? ? A DG 10 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 14 N7 ? ? ? 1_555 A DG 22 N2 ? ? A DG 14 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 14 O6 ? ? ? 1_555 A DG 22 N1 ? ? A DG 14 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 15 N1 ? ? ? 1_555 A DG 21 O6 ? ? A DG 15 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A DG 15 N2 ? ? ? 1_555 A DG 21 N7 ? ? A DG 15 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A DG 16 N7 ? ? ? 1_555 A DG 20 N2 ? ? A DG 16 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A DG 16 O6 ? ? ? 1_555 A DG 20 N1 ? ? A DG 16 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H62 A DA 7 ? ? O2 A DT 18 ? ? 1.43 2 3 H62 A DA 7 ? ? O2 A DT 18 ? ? 1.47 3 5 "H2''" A DT 17 ? ? "O4'" A DT 18 ? ? 1.55 4 6 O4 A DT 11 ? ? H62 A DA 13 ? ? 1.53 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C3'" A DT 5 ? ? "C2'" A DT 5 ? ? 1.467 1.516 -0.049 0.008 N 2 1 "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? 1.604 1.518 0.086 0.012 N 3 1 C5 A DT 6 ? ? C7 A DT 6 ? ? 1.546 1.496 0.050 0.006 N 4 1 "C5'" A DT 11 ? ? "C4'" A DT 11 ? ? 1.554 1.512 0.042 0.007 N 5 1 C5 A DT 12 ? ? C7 A DT 12 ? ? 1.534 1.496 0.038 0.006 N 6 1 "C5'" A DA 19 ? ? "C4'" A DA 19 ? ? 1.560 1.512 0.048 0.007 N 7 2 C6 A DT 5 ? ? N1 A DT 5 ? ? 1.326 1.378 -0.052 0.007 N 8 2 C5 A DT 5 ? ? C7 A DT 5 ? ? 1.534 1.496 0.038 0.006 N 9 2 C5 A DT 6 ? ? C7 A DT 6 ? ? 1.533 1.496 0.037 0.006 N 10 2 "C5'" A DA 13 ? ? "C4'" A DA 13 ? ? 1.560 1.512 0.048 0.007 N 11 2 C5 A DT 17 ? ? C7 A DT 17 ? ? 1.533 1.496 0.037 0.006 N 12 2 C5 A DT 18 ? ? C7 A DT 18 ? ? 1.535 1.496 0.039 0.006 N 13 2 "C5'" A DA 19 ? ? "C4'" A DA 19 ? ? 1.554 1.512 0.042 0.007 N 14 3 "C5'" A DA 1 ? ? "C4'" A DA 1 ? ? 1.558 1.512 0.046 0.007 N 15 3 C6 A DT 5 ? ? N1 A DT 5 ? ? 1.325 1.378 -0.053 0.007 N 16 3 C5 A DT 5 ? ? C7 A DT 5 ? ? 1.537 1.496 0.041 0.006 N 17 3 "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? 1.604 1.518 0.086 0.012 N 18 3 C5 A DT 6 ? ? C7 A DT 6 ? ? 1.532 1.496 0.036 0.006 N 19 3 C5 A DT 12 ? ? C7 A DT 12 ? ? 1.538 1.496 0.042 0.006 N 20 3 C5 A DT 17 ? ? C7 A DT 17 ? ? 1.532 1.496 0.036 0.006 N 21 4 C5 A DT 5 ? ? C7 A DT 5 ? ? 1.532 1.496 0.036 0.006 N 22 4 "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? 1.611 1.518 0.093 0.012 N 23 4 "C2'" A DG 9 ? ? "C1'" A DG 9 ? ? 1.583 1.519 0.064 0.010 N 24 4 "C2'" A DT 12 ? ? "C1'" A DT 12 ? ? 1.607 1.519 0.088 0.010 N 25 4 "C5'" A DA 13 ? ? "C4'" A DA 13 ? ? 1.563 1.512 0.051 0.007 N 26 4 C5 A DT 18 ? ? C7 A DT 18 ? ? 1.533 1.496 0.037 0.006 N 27 4 "C5'" A DA 19 ? ? "C4'" A DA 19 ? ? 1.560 1.512 0.048 0.007 N 28 5 C5 A DT 5 ? ? C7 A DT 5 ? ? 1.533 1.496 0.037 0.006 N 29 5 C5 A DT 6 ? ? C7 A DT 6 ? ? 1.544 1.496 0.048 0.006 N 30 5 C5 A DT 11 ? ? C7 A DT 11 ? ? 1.534 1.496 0.038 0.006 N 31 5 C5 A DT 12 ? ? C7 A DT 12 ? ? 1.533 1.496 0.037 0.006 N 32 5 "C5'" A DA 19 ? ? "C4'" A DA 19 ? ? 1.555 1.512 0.043 0.007 N 33 6 "C5'" A DA 1 ? ? "C4'" A DA 1 ? ? 1.555 1.512 0.043 0.007 N 34 6 C6 A DT 5 ? ? N1 A DT 5 ? ? 1.330 1.378 -0.048 0.007 N 35 6 "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? 1.610 1.518 0.092 0.012 N 36 6 C5 A DT 6 ? ? C7 A DT 6 ? ? 1.532 1.496 0.036 0.006 N 37 6 "C2'" A DG 9 ? ? "C1'" A DG 9 ? ? 1.579 1.519 0.060 0.010 N 38 6 "C2'" A DT 11 ? ? "C1'" A DT 11 ? ? 1.586 1.519 0.067 0.010 N 39 6 C5 A DT 12 ? ? C7 A DT 12 ? ? 1.537 1.496 0.041 0.006 N 40 6 "C5'" A DA 13 ? ? "C4'" A DA 13 ? ? 1.562 1.512 0.050 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DA 1 ? ? "C1'" A DA 1 ? ? N9 A DA 1 ? ? 111.79 108.30 3.49 0.30 N 2 1 "O4'" A DG 3 ? ? "C4'" A DG 3 ? ? "C3'" A DG 3 ? ? 109.69 106.00 3.69 0.60 N 3 1 "C5'" A DG 3 ? ? "C4'" A DG 3 ? ? "O4'" A DG 3 ? ? 88.23 109.30 -21.07 1.90 N 4 1 "C2'" A DG 3 ? ? "C3'" A DG 3 ? ? "O3'" A DG 3 ? ? 85.39 109.40 -24.01 2.50 N 5 1 "C4'" A DG 3 ? ? "C3'" A DG 3 ? ? "C2'" A DG 3 ? ? 97.04 102.20 -5.16 0.70 N 6 1 N9 A DG 3 ? ? "C1'" A DG 3 ? ? "C2'" A DG 3 ? ? 123.80 114.30 9.50 1.40 N 7 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.87 108.30 4.57 0.30 N 8 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.45 108.30 3.15 0.30 N 9 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 113.67 108.30 5.37 0.30 N 10 1 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 117.11 122.90 -5.79 0.60 N 11 1 "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? "C1'" A DT 6 ? ? 96.75 102.40 -5.65 0.80 N 12 1 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? "C2'" A DT 6 ? ? 100.83 105.90 -5.07 0.80 N 13 1 "C3'" A DA 7 ? ? "C2'" A DA 7 ? ? "C1'" A DA 7 ? ? 96.84 102.40 -5.56 0.80 N 14 1 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 114.73 108.30 6.43 0.30 N 15 1 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DG 9 ? ? 128.17 119.70 8.47 1.20 Y 16 1 "C3'" A DG 9 ? ? "C2'" A DG 9 ? ? "C1'" A DG 9 ? ? 96.84 102.40 -5.56 0.80 N 17 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? "C2'" A DG 9 ? ? 99.62 105.90 -6.28 0.80 N 18 1 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.00 108.30 4.70 0.30 N 19 1 "C3'" A DG 16 ? ? "C2'" A DG 16 ? ? "C1'" A DG 16 ? ? 97.41 102.40 -4.99 0.80 N 20 1 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 113.96 108.30 5.66 0.30 N 21 1 "C3'" A DT 17 ? ? "C2'" A DT 17 ? ? "C1'" A DT 17 ? ? 96.27 102.40 -6.13 0.80 N 22 1 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.85 108.30 3.55 0.30 N 23 1 "C3'" A DG 20 ? ? "C2'" A DG 20 ? ? "C1'" A DG 20 ? ? 96.32 102.40 -6.08 0.80 N 24 1 "C3'" A DG 20 ? ? "O3'" A DG 20 ? ? P A DG 21 ? ? 128.90 119.70 9.20 1.20 Y 25 1 "C3'" A DG 21 ? ? "C2'" A DG 21 ? ? "C1'" A DG 21 ? ? 96.30 102.40 -6.10 0.80 N 26 1 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.34 108.30 3.04 0.30 N 27 2 "C3'" A DA 1 ? ? "O3'" A DA 1 ? ? P A DG 2 ? ? 129.62 119.70 9.92 1.20 Y 28 2 "C3'" A DG 2 ? ? "C2'" A DG 2 ? ? "C1'" A DG 2 ? ? 97.24 102.40 -5.16 0.80 N 29 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 110.53 108.30 2.23 0.30 N 30 2 "O4'" A DG 3 ? ? "C4'" A DG 3 ? ? "C3'" A DG 3 ? ? 100.25 104.50 -4.25 0.40 N 31 2 "C4'" A DG 3 ? ? "C3'" A DG 3 ? ? "O3'" A DG 3 ? ? 130.87 112.30 18.57 2.00 N 32 2 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 113.82 108.30 5.52 0.30 N 33 2 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.37 108.30 2.07 0.30 N 34 2 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.95 108.30 3.65 0.30 N 35 2 "C4'" A DT 6 ? ? "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? 96.68 102.20 -5.52 0.70 N 36 2 "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? "C1'" A DT 6 ? ? 96.58 102.40 -5.82 0.80 N 37 2 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? "C2'" A DT 6 ? ? 99.82 105.90 -6.08 0.80 N 38 2 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 112.05 108.30 3.75 0.30 N 39 2 "C5'" A DA 7 ? ? "C4'" A DA 7 ? ? "O4'" A DA 7 ? ? 117.79 109.80 7.99 1.10 N 40 2 "C1'" A DA 7 ? ? "O4'" A DA 7 ? ? "C4'" A DA 7 ? ? 103.80 110.10 -6.30 1.00 N 41 2 "C3'" A DA 7 ? ? "C2'" A DA 7 ? ? "C1'" A DA 7 ? ? 96.65 102.40 -5.75 0.80 N 42 2 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? "C2'" A DA 7 ? ? 100.03 105.90 -5.87 0.80 N 43 2 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 116.79 108.30 8.49 0.30 N 44 2 "C3'" A DG 9 ? ? "O3'" A DG 9 ? ? P A DG 10 ? ? 131.20 119.70 11.50 1.20 Y 45 2 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 119.01 108.30 10.71 0.30 N 46 2 "C4'" A DT 11 ? ? "C3'" A DT 11 ? ? "C2'" A DT 11 ? ? 96.34 102.20 -5.86 0.70 N 47 2 "C3'" A DT 11 ? ? "C2'" A DT 11 ? ? "C1'" A DT 11 ? ? 96.34 102.40 -6.06 0.80 N 48 2 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.24 122.90 -3.66 0.60 N 49 2 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.50 108.30 5.20 0.30 N 50 2 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.06 122.90 -3.84 0.60 N 51 2 "O4'" A DA 13 ? ? "C4'" A DA 13 ? ? "C3'" A DA 13 ? ? 100.99 104.50 -3.51 0.40 N 52 2 "C3'" A DG 14 ? ? "C2'" A DG 14 ? ? "C1'" A DG 14 ? ? 96.24 102.40 -6.16 0.80 N 53 2 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.20 108.30 2.90 0.30 N 54 2 "C3'" A DG 20 ? ? "C2'" A DG 20 ? ? "C1'" A DG 20 ? ? 93.41 102.40 -8.99 0.80 N 55 2 "C3'" A DG 20 ? ? "O3'" A DG 20 ? ? P A DG 21 ? ? 127.37 119.70 7.67 1.20 Y 56 2 "C3'" A DG 21 ? ? "C2'" A DG 21 ? ? "C1'" A DG 21 ? ? 96.72 102.40 -5.68 0.80 N 57 2 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? "C2'" A DG 21 ? ? 100.26 105.90 -5.64 0.80 N 58 2 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 114.58 108.30 6.28 0.30 N 59 2 "C3'" A DG 22 ? ? "C2'" A DG 22 ? ? "C1'" A DG 22 ? ? 96.03 102.40 -6.37 0.80 N 60 3 "O4'" A DA 1 ? ? "C1'" A DA 1 ? ? N9 A DA 1 ? ? 115.52 108.30 7.22 0.30 N 61 3 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 110.36 106.00 4.36 0.60 N 62 3 "C5'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 129.62 115.70 13.92 1.20 N 63 3 "C5'" A DG 2 ? ? "C4'" A DG 2 ? ? "O4'" A DG 2 ? ? 119.18 109.80 9.38 1.10 N 64 3 "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? "C2'" A DG 2 ? ? 92.59 102.20 -9.61 0.70 N 65 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 103.50 108.00 -4.50 0.70 N 66 3 "O4'" A DG 4 ? ? "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? 110.92 106.00 4.92 0.60 N 67 3 "C5'" A DG 4 ? ? "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? 125.02 115.70 9.32 1.20 N 68 3 "C5'" A DG 4 ? ? "C4'" A DG 4 ? ? "O4'" A DG 4 ? ? 123.80 109.80 14.00 1.10 N 69 3 "C1'" A DG 4 ? ? "O4'" A DG 4 ? ? "C4'" A DG 4 ? ? 103.13 110.10 -6.97 1.00 N 70 3 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 94.92 102.20 -7.28 0.70 N 71 3 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 114.52 108.30 6.22 0.30 N 72 3 "O4'" A DT 5 ? ? "C4'" A DT 5 ? ? "C3'" A DT 5 ? ? 101.36 104.50 -3.14 0.40 N 73 3 "C1'" A DT 5 ? ? "O4'" A DT 5 ? ? "C4'" A DT 5 ? ? 102.20 110.10 -7.90 1.00 N 74 3 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 113.04 108.30 4.74 0.30 N 75 3 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.14 108.30 1.84 0.30 N 76 3 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 119.27 122.90 -3.63 0.60 N 77 3 "C3'" A DT 6 ? ? "O3'" A DT 6 ? ? P A DA 7 ? ? 130.83 119.70 11.13 1.20 Y 78 3 "C5'" A DA 7 ? ? "C4'" A DA 7 ? ? "O4'" A DA 7 ? ? 116.83 109.80 7.03 1.10 N 79 3 "C1'" A DA 7 ? ? "O4'" A DA 7 ? ? "C4'" A DA 7 ? ? 103.31 110.10 -6.79 1.00 N 80 3 "C3'" A DA 7 ? ? "C2'" A DA 7 ? ? "C1'" A DA 7 ? ? 96.95 102.40 -5.45 0.80 N 81 3 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? "C2'" A DA 7 ? ? 99.60 105.90 -6.30 0.80 N 82 3 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 119.02 108.30 10.72 0.30 N 83 3 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DG 9 ? ? 128.99 119.70 9.29 1.20 Y 84 3 "C3'" A DG 9 ? ? "C2'" A DG 9 ? ? "C1'" A DG 9 ? ? 96.77 102.40 -5.63 0.80 N 85 3 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 113.68 108.30 5.38 0.30 N 86 3 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 118.74 122.90 -4.16 0.60 N 87 3 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 114.96 108.30 6.66 0.30 N 88 3 "C3'" A DG 14 ? ? "C2'" A DG 14 ? ? "C1'" A DG 14 ? ? 97.09 102.40 -5.31 0.80 N 89 3 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 100.92 105.90 -4.98 0.80 N 90 3 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 115.03 108.30 6.73 0.30 N 91 3 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.60 108.30 3.30 0.30 N 92 3 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 119.25 122.90 -3.65 0.60 N 93 3 C6 A DT 18 ? ? C5 A DT 18 ? ? C7 A DT 18 ? ? 118.34 122.90 -4.56 0.60 N 94 3 "C3'" A DA 19 ? ? "O3'" A DA 19 ? ? P A DG 20 ? ? 127.35 119.70 7.65 1.20 Y 95 3 "C3'" A DG 20 ? ? "C2'" A DG 20 ? ? "C1'" A DG 20 ? ? 95.90 102.40 -6.50 0.80 N 96 3 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.31 108.30 3.01 0.30 N 97 3 "C3'" A DG 20 ? ? "O3'" A DG 20 ? ? P A DG 21 ? ? 131.73 119.70 12.03 1.20 Y 98 3 "C3'" A DG 21 ? ? "C2'" A DG 21 ? ? "C1'" A DG 21 ? ? 97.11 102.40 -5.29 0.80 N 99 3 "C3'" A DG 22 ? ? "C2'" A DG 22 ? ? "C1'" A DG 22 ? ? 96.97 102.40 -5.43 0.80 N 100 4 "C5'" A DA 1 ? ? "C4'" A DA 1 ? ? "C3'" A DA 1 ? ? 123.03 115.70 7.33 1.20 N 101 4 "C5'" A DA 1 ? ? "C4'" A DA 1 ? ? "O4'" A DA 1 ? ? 127.54 109.80 17.74 1.10 N 102 4 "C4'" A DA 1 ? ? "C3'" A DA 1 ? ? "C2'" A DA 1 ? ? 95.48 102.20 -6.72 0.70 N 103 4 "C5'" A DG 4 ? ? "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? 128.64 115.70 12.94 1.20 N 104 4 "C5'" A DG 4 ? ? "C4'" A DG 4 ? ? "O4'" A DG 4 ? ? 121.57 109.80 11.77 1.10 N 105 4 "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? "C1'" A DG 4 ? ? 97.57 102.40 -4.83 0.80 N 106 4 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? "C2'" A DT 5 ? ? 100.98 105.90 -4.92 0.80 N 107 4 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.84 108.30 3.54 0.30 N 108 4 "C4'" A DT 6 ? ? "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? 97.68 102.20 -4.52 0.70 N 109 4 "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? "C1'" A DT 6 ? ? 95.11 102.40 -7.29 0.80 N 110 4 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 119.05 122.90 -3.85 0.60 N 111 4 "C5'" A DA 7 ? ? "C4'" A DA 7 ? ? "O4'" A DA 7 ? ? 117.10 109.80 7.30 1.10 N 112 4 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? "C2'" A DA 7 ? ? 99.58 105.90 -6.32 0.80 N 113 4 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 116.24 108.30 7.94 0.30 N 114 4 "C3'" A DG 9 ? ? "C2'" A DG 9 ? ? "C1'" A DG 9 ? ? 96.89 102.40 -5.51 0.80 N 115 4 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? "C2'" A DG 9 ? ? 100.77 105.90 -5.13 0.80 N 116 4 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? 94.83 102.20 -7.37 0.70 N 117 4 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 113.93 108.30 5.63 0.30 N 118 4 "C1'" A DT 11 ? ? "O4'" A DT 11 ? ? "C4'" A DT 11 ? ? 99.39 110.10 -10.71 1.00 N 119 4 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? "C2'" A DT 12 ? ? 95.68 105.90 -10.22 0.80 N 120 4 N1 A DT 12 ? ? "C1'" A DT 12 ? ? "C2'" A DT 12 ? ? 123.44 114.30 9.14 1.40 N 121 4 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 111.21 108.30 2.91 0.30 N 122 4 N3 A DT 12 ? ? C2 A DT 12 ? ? O2 A DT 12 ? ? 118.35 122.30 -3.95 0.60 N 123 4 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 118.96 122.90 -3.94 0.60 N 124 4 "C5'" A DA 13 ? ? "C4'" A DA 13 ? ? "O4'" A DA 13 ? ? 116.41 109.80 6.61 1.10 N 125 4 "C3'" A DG 14 ? ? "C2'" A DG 14 ? ? "C1'" A DG 14 ? ? 97.23 102.40 -5.17 0.80 N 126 4 "C4'" A DG 16 ? ? "C3'" A DG 16 ? ? "C2'" A DG 16 ? ? 97.05 102.20 -5.15 0.70 N 127 4 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 113.16 108.30 4.86 0.30 N 128 4 "C5'" A DT 18 ? ? "C4'" A DT 18 ? ? "O4'" A DT 18 ? ? 116.98 109.80 7.18 1.10 N 129 4 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 116.42 108.30 8.12 0.30 N 130 4 "O5'" A DA 19 ? ? "C5'" A DA 19 ? ? "C4'" A DA 19 ? ? 104.19 109.40 -5.21 0.80 N 131 4 "O4'" A DA 19 ? ? "C1'" A DA 19 ? ? N9 A DA 19 ? ? 113.12 108.30 4.82 0.30 N 132 4 "C3'" A DG 20 ? ? "C2'" A DG 20 ? ? "C1'" A DG 20 ? ? 94.88 102.40 -7.52 0.80 N 133 4 "C5'" A DG 21 ? ? "C4'" A DG 21 ? ? "C3'" A DG 21 ? ? 126.40 115.70 10.70 1.20 N 134 4 "C5'" A DG 21 ? ? "C4'" A DG 21 ? ? "O4'" A DG 21 ? ? 123.68 109.80 13.88 1.10 N 135 4 "C4'" A DG 21 ? ? "C3'" A DG 21 ? ? "C2'" A DG 21 ? ? 96.74 102.20 -5.46 0.70 N 136 4 "C3'" A DG 21 ? ? "C2'" A DG 21 ? ? "C1'" A DG 21 ? ? 96.87 102.40 -5.53 0.80 N 137 4 "C3'" A DG 22 ? ? "C2'" A DG 22 ? ? "C1'" A DG 22 ? ? 96.54 102.40 -5.86 0.80 N 138 5 "O4'" A DA 1 ? ? "C1'" A DA 1 ? ? N9 A DA 1 ? ? 110.83 108.30 2.53 0.30 N 139 5 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DG 3 ? ? 128.62 119.70 8.92 1.20 Y 140 5 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? "C2'" A DG 4 ? ? 100.74 105.90 -5.16 0.80 N 141 5 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 112.77 108.30 4.47 0.30 N 142 5 "C4'" A DT 5 ? ? "C3'" A DT 5 ? ? "C2'" A DT 5 ? ? 97.40 102.20 -4.80 0.70 N 143 5 "C3'" A DT 5 ? ? "C2'" A DT 5 ? ? "C1'" A DT 5 ? ? 96.11 102.40 -6.29 0.80 N 144 5 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? "C2'" A DT 5 ? ? 100.40 105.90 -5.50 0.80 N 145 5 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 116.89 108.30 8.59 0.30 N 146 5 N3 A DT 5 ? ? C2 A DT 5 ? ? O2 A DT 5 ? ? 117.96 122.30 -4.34 0.60 N 147 5 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.28 122.90 -3.62 0.60 N 148 5 "C4'" A DT 6 ? ? "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? 95.40 102.20 -6.80 0.70 N 149 5 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 114.55 108.30 6.25 0.30 N 150 5 "C3'" A DT 6 ? ? "O3'" A DT 6 ? ? P A DA 7 ? ? 131.88 119.70 12.18 1.20 Y 151 5 "C3'" A DA 7 ? ? "C2'" A DA 7 ? ? "C1'" A DA 7 ? ? 96.70 102.40 -5.70 0.80 N 152 5 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 115.36 108.30 7.06 0.30 N 153 5 "C3'" A DG 8 ? ? "C2'" A DG 8 ? ? "C1'" A DG 8 ? ? 96.55 102.40 -5.85 0.80 N 154 5 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? "C2'" A DG 8 ? ? 101.08 105.90 -4.82 0.80 N 155 5 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.50 108.30 3.20 0.30 N 156 5 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? "C2'" A DG 9 ? ? 96.24 105.90 -9.66 0.80 N 157 5 "C3'" A DG 9 ? ? "O3'" A DG 9 ? ? P A DG 10 ? ? 129.55 119.70 9.85 1.20 Y 158 5 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.15 108.30 3.85 0.30 N 159 5 "C3'" A DG 10 ? ? "O3'" A DG 10 ? ? P A DT 11 ? ? 127.30 119.70 7.60 1.20 Y 160 5 "C4'" A DT 11 ? ? "C3'" A DT 11 ? ? "C2'" A DT 11 ? ? 97.78 102.20 -4.42 0.70 N 161 5 "C3'" A DT 11 ? ? "C2'" A DT 11 ? ? "C1'" A DT 11 ? ? 96.56 102.40 -5.84 0.80 N 162 5 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.18 122.90 -3.72 0.60 N 163 5 "C5'" A DT 12 ? ? "C4'" A DT 12 ? ? "O4'" A DT 12 ? ? 117.54 109.80 7.74 1.10 N 164 5 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? "C2'" A DT 12 ? ? 98.92 105.90 -6.98 0.80 N 165 5 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 114.74 108.30 6.44 0.30 N 166 5 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.13 122.90 -3.77 0.60 N 167 5 "O4'" A DA 13 ? ? "C4'" A DA 13 ? ? "C3'" A DA 13 ? ? 100.21 104.50 -4.29 0.40 N 168 5 P A DG 14 ? ? "O5'" A DG 14 ? ? "C5'" A DG 14 ? ? 133.11 120.90 12.21 1.60 N 169 5 "C3'" A DG 14 ? ? "C2'" A DG 14 ? ? "C1'" A DG 14 ? ? 97.57 102.40 -4.83 0.80 N 170 5 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 99.47 105.90 -6.43 0.80 N 171 5 "C3'" A DG 14 ? ? "O3'" A DG 14 ? ? P A DG 15 ? ? 133.81 119.70 14.11 1.20 Y 172 5 "C4'" A DT 17 ? ? "C3'" A DT 17 ? ? "C2'" A DT 17 ? ? 97.81 102.20 -4.39 0.70 N 173 5 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 113.82 108.30 5.52 0.30 N 174 5 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 118.94 122.90 -3.96 0.60 N 175 5 "C3'" A DT 17 ? ? "O3'" A DT 17 ? ? P A DT 18 ? ? 133.95 119.70 14.25 1.20 Y 176 5 C6 A DT 18 ? ? C5 A DT 18 ? ? C7 A DT 18 ? ? 118.52 122.90 -4.38 0.60 N 177 5 "C5'" A DA 19 ? ? "C4'" A DA 19 ? ? "O4'" A DA 19 ? ? 118.79 109.80 8.99 1.10 N 178 5 "O4'" A DA 19 ? ? "C1'" A DA 19 ? ? "C2'" A DA 19 ? ? 100.18 105.90 -5.72 0.80 N 179 5 "C3'" A DG 20 ? ? "C2'" A DG 20 ? ? "C1'" A DG 20 ? ? 94.41 102.40 -7.99 0.80 N 180 5 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? "C2'" A DG 21 ? ? 99.42 105.90 -6.48 0.80 N 181 5 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.96 108.30 3.66 0.30 N 182 6 "C3'" A DG 3 ? ? "O3'" A DG 3 ? ? P A DG 4 ? ? 130.52 119.70 10.82 1.20 Y 183 6 "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? "C1'" A DG 4 ? ? 97.45 102.40 -4.95 0.80 N 184 6 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DT 5 ? ? 111.92 119.70 -7.78 1.20 Y 185 6 "C1'" A DT 5 ? ? "O4'" A DT 5 ? ? "C4'" A DT 5 ? ? 100.71 110.10 -9.39 1.00 N 186 6 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.11 108.30 2.81 0.30 N 187 6 "C3'" A DT 6 ? ? "C2'" A DT 6 ? ? "C1'" A DT 6 ? ? 94.62 102.40 -7.78 0.80 N 188 6 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? "C2'" A DT 6 ? ? 99.00 105.90 -6.90 0.80 N 189 6 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.32 108.30 2.02 0.30 N 190 6 "C3'" A DA 7 ? ? "C2'" A DA 7 ? ? "C1'" A DA 7 ? ? 97.54 102.40 -4.86 0.80 N 191 6 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? "C2'" A DA 7 ? ? 99.97 105.90 -5.93 0.80 N 192 6 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 114.85 108.30 6.55 0.30 N 193 6 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? "C2'" A DG 8 ? ? 100.29 105.90 -5.61 0.80 N 194 6 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DG 9 ? ? 129.68 119.70 9.98 1.20 Y 195 6 "C3'" A DG 9 ? ? "C2'" A DG 9 ? ? "C1'" A DG 9 ? ? 94.63 102.40 -7.77 0.80 N 196 6 "C3'" A DT 11 ? ? "C2'" A DT 11 ? ? "C1'" A DT 11 ? ? 97.26 102.40 -5.14 0.80 N 197 6 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 116.85 108.30 8.55 0.30 N 198 6 "O4'" A DA 13 ? ? "C1'" A DA 13 ? ? N9 A DA 13 ? ? 111.80 108.30 3.50 0.30 N 199 6 "C3'" A DG 14 ? ? "C2'" A DG 14 ? ? "C1'" A DG 14 ? ? 96.83 102.40 -5.57 0.80 N 200 6 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 99.72 105.90 -6.18 0.80 N 201 6 "C3'" A DG 14 ? ? "O3'" A DG 14 ? ? P A DG 15 ? ? 129.42 119.70 9.72 1.20 Y 202 6 "C3'" A DG 15 ? ? "C2'" A DG 15 ? ? "C1'" A DG 15 ? ? 96.97 102.40 -5.43 0.80 N 203 6 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 112.66 108.30 4.36 0.30 N 204 6 C8 A DG 16 ? ? N9 A DG 16 ? ? C4 A DG 16 ? ? 103.85 106.40 -2.55 0.40 N 205 6 "C4'" A DT 17 ? ? "C3'" A DT 17 ? ? "C2'" A DT 17 ? ? 95.92 102.20 -6.28 0.70 N 206 6 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.48 108.30 3.18 0.30 N 207 6 "C5'" A DT 18 ? ? "C4'" A DT 18 ? ? "C3'" A DT 18 ? ? 123.17 115.70 7.47 1.20 N 208 6 "C3'" A DT 18 ? ? "O3'" A DT 18 ? ? P A DA 19 ? ? 127.47 119.70 7.77 1.20 Y 209 6 C8 A DA 19 ? ? N9 A DA 19 ? ? C4 A DA 19 ? ? 103.27 105.80 -2.53 0.40 N 210 6 "C3'" A DG 20 ? ? "C2'" A DG 20 ? ? "C1'" A DG 20 ? ? 94.10 102.40 -8.30 0.80 N 211 6 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? "C2'" A DG 20 ? ? 101.07 105.90 -4.83 0.80 N 212 6 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 113.04 108.30 4.74 0.30 N 213 6 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? "C2'" A DG 21 ? ? 98.98 105.90 -6.92 0.80 N 214 6 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.68 108.30 3.38 0.30 N 215 6 "C3'" A DG 21 ? ? "O3'" A DG 21 ? ? P A DG 22 ? ? 128.23 119.70 8.53 1.20 Y 216 6 "C3'" A DG 22 ? ? "C2'" A DG 22 ? ? "C1'" A DG 22 ? ? 93.54 102.40 -8.86 0.80 N # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 "C4'" ? A DG 3 ? 'WRONG HAND' . 2 1 "C3'" ? A DG 3 ? 'WRONG HAND' . 3 2 "C3'" ? A DG 3 ? PLANAR . 4 2 "C3'" ? A DG 10 ? 'WRONG HAND' . 5 2 "C3'" ? A DT 11 ? 'WRONG HAND' . 6 2 "C1'" ? A DT 11 ? 'WRONG HAND' . 7 2 "C3'" ? A DA 13 ? 'WRONG HAND' . 8 3 "C4'" ? A DG 2 ? PLANAR . 9 3 "C4'" ? A DG 4 ? PLANAR . 10 3 "C4'" ? A DG 10 ? 'WRONG HAND' . 11 3 "C3'" ? A DG 10 ? 'WRONG HAND' . 12 4 "C4'" ? A DA 1 ? PLANAR . 13 4 "C4'" ? A DG 4 ? PLANAR . 14 4 "C4'" ? A DG 21 ? PLANAR . 15 5 "C1'" ? A DT 5 ? 'WRONG HAND' . 16 5 "C3'" ? A DT 6 ? 'WRONG HAND' . 17 5 "C3'" ? A DG 10 ? 'WRONG HAND' . 18 5 "C1'" ? A DA 13 ? 'WRONG HAND' . 19 6 "C4'" ? A DG 10 ? 'WRONG HAND' . 20 6 "C3'" ? A DG 10 ? 'WRONG HAND' . 21 6 "C1'" ? A DT 17 ? 'WRONG HAND' . # _pdbx_nmr_ensemble.entry_id 143D _pdbx_nmr_ensemble.conformers_calculated_total_number 6 _pdbx_nmr_ensemble.conformers_submitted_total_number 6 _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_refine.entry_id 143D _pdbx_nmr_refine.method 'DISTANCE GEOMETRY, MOLECULAR DYNAMICS' _pdbx_nmr_refine.details ;A SET OF SIX STRUCTURES WERE OBTAINED USING METRIC MATRIX DISTANCE GEOMETRY, AND SUBSEQUENTLY REFINED BY DISTANCE-RESTRAINED MOLECULAR DYNAMICS USING A SET OF INTER-PROTON DISTANCES AND DIHEDRAL ANGLE RESTRAINTS DERIVED FROM THE NMR DATA. THE SIX DISTANCE-REFINED STRUCTURES WERE REFINED FURTHER USING RELAXATION-MATRIX BASED NOE INTENSITY-RESTRAINED MOLECULAR DYNAMICS. THE FINAL SIX STRUCTURES WERE OBTAINED BY TAKING THE AVERAGE COORDINATES OF THE LAST 2 PS OF THE DYNAMICS DURING RELAXATION MATRIX REFINEMENT AND MINIMIZED. THE R(1/6) VALUE WAS USED TO REFINE THE STRUCTURE DURING RELAXATION MATRIX REFINEMENT. THE R(1/6) FACTOR AND THE RMS DEVIATIONS FROM IDEAL GEOMETRY FOR THE SIX FINAL STRUCTURES ARE: MODEL1 MODEL2 MODEL3 MODEL4 MODEL5 MODEL6 R(1/6) FACTOR 0.021 0.016 0.022 0.026 0.024 0.027 BOND (ANG) 0.009 0.008 0.009 0.011 0.009 0.011 ANGLES (DEG) 2.949 3.085 3.286 3.853 3.038 3.157 IMPROPERS (DEG) 0.285 0.221 0.267 0.235 0.243 0.248 ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_software.name X-PLOR _pdbx_nmr_software.version ? _pdbx_nmr_software.classification refinement _pdbx_nmr_software.authors BRUNGER _pdbx_nmr_software.ordinal 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DG OP3 O N N 37 DG P P N N 38 DG OP1 O N N 39 DG OP2 O N N 40 DG "O5'" O N N 41 DG "C5'" C N N 42 DG "C4'" C N R 43 DG "O4'" O N N 44 DG "C3'" C N S 45 DG "O3'" O N N 46 DG "C2'" C N N 47 DG "C1'" C N R 48 DG N9 N Y N 49 DG C8 C Y N 50 DG N7 N Y N 51 DG C5 C Y N 52 DG C6 C N N 53 DG O6 O N N 54 DG N1 N N N 55 DG C2 C N N 56 DG N2 N N N 57 DG N3 N N N 58 DG C4 C Y N 59 DG HOP3 H N N 60 DG HOP2 H N N 61 DG "H5'" H N N 62 DG "H5''" H N N 63 DG "H4'" H N N 64 DG "H3'" H N N 65 DG "HO3'" H N N 66 DG "H2'" H N N 67 DG "H2''" H N N 68 DG "H1'" H N N 69 DG H8 H N N 70 DG H1 H N N 71 DG H21 H N N 72 DG H22 H N N 73 DT OP3 O N N 74 DT P P N N 75 DT OP1 O N N 76 DT OP2 O N N 77 DT "O5'" O N N 78 DT "C5'" C N N 79 DT "C4'" C N R 80 DT "O4'" O N N 81 DT "C3'" C N S 82 DT "O3'" O N N 83 DT "C2'" C N N 84 DT "C1'" C N R 85 DT N1 N N N 86 DT C2 C N N 87 DT O2 O N N 88 DT N3 N N N 89 DT C4 C N N 90 DT O4 O N N 91 DT C5 C N N 92 DT C7 C N N 93 DT C6 C N N 94 DT HOP3 H N N 95 DT HOP2 H N N 96 DT "H5'" H N N 97 DT "H5''" H N N 98 DT "H4'" H N N 99 DT "H3'" H N N 100 DT "HO3'" H N N 101 DT "H2'" H N N 102 DT "H2''" H N N 103 DT "H1'" H N N 104 DT H3 H N N 105 DT H71 H N N 106 DT H72 H N N 107 DT H73 H N N 108 DT H6 H N N 109 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DG OP3 P sing N N 39 DG OP3 HOP3 sing N N 40 DG P OP1 doub N N 41 DG P OP2 sing N N 42 DG P "O5'" sing N N 43 DG OP2 HOP2 sing N N 44 DG "O5'" "C5'" sing N N 45 DG "C5'" "C4'" sing N N 46 DG "C5'" "H5'" sing N N 47 DG "C5'" "H5''" sing N N 48 DG "C4'" "O4'" sing N N 49 DG "C4'" "C3'" sing N N 50 DG "C4'" "H4'" sing N N 51 DG "O4'" "C1'" sing N N 52 DG "C3'" "O3'" sing N N 53 DG "C3'" "C2'" sing N N 54 DG "C3'" "H3'" sing N N 55 DG "O3'" "HO3'" sing N N 56 DG "C2'" "C1'" sing N N 57 DG "C2'" "H2'" sing N N 58 DG "C2'" "H2''" sing N N 59 DG "C1'" N9 sing N N 60 DG "C1'" "H1'" sing N N 61 DG N9 C8 sing Y N 62 DG N9 C4 sing Y N 63 DG C8 N7 doub Y N 64 DG C8 H8 sing N N 65 DG N7 C5 sing Y N 66 DG C5 C6 sing N N 67 DG C5 C4 doub Y N 68 DG C6 O6 doub N N 69 DG C6 N1 sing N N 70 DG N1 C2 sing N N 71 DG N1 H1 sing N N 72 DG C2 N2 sing N N 73 DG C2 N3 doub N N 74 DG N2 H21 sing N N 75 DG N2 H22 sing N N 76 DG N3 C4 sing N N 77 DT OP3 P sing N N 78 DT OP3 HOP3 sing N N 79 DT P OP1 doub N N 80 DT P OP2 sing N N 81 DT P "O5'" sing N N 82 DT OP2 HOP2 sing N N 83 DT "O5'" "C5'" sing N N 84 DT "C5'" "C4'" sing N N 85 DT "C5'" "H5'" sing N N 86 DT "C5'" "H5''" sing N N 87 DT "C4'" "O4'" sing N N 88 DT "C4'" "C3'" sing N N 89 DT "C4'" "H4'" sing N N 90 DT "O4'" "C1'" sing N N 91 DT "C3'" "O3'" sing N N 92 DT "C3'" "C2'" sing N N 93 DT "C3'" "H3'" sing N N 94 DT "O3'" "HO3'" sing N N 95 DT "C2'" "C1'" sing N N 96 DT "C2'" "H2'" sing N N 97 DT "C2'" "H2''" sing N N 98 DT "C1'" N1 sing N N 99 DT "C1'" "H1'" sing N N 100 DT N1 C2 sing N N 101 DT N1 C6 sing N N 102 DT C2 O2 doub N N 103 DT C2 N3 sing N N 104 DT N3 C4 sing N N 105 DT N3 H3 sing N N 106 DT C4 O4 doub N N 107 DT C4 C5 sing N N 108 DT C5 C7 sing N N 109 DT C5 C6 doub N N 110 DT C7 H71 sing N N 111 DT C7 H72 sing N N 112 DT C7 H73 sing N N 113 DT C6 H6 sing N N 114 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 143D 'double helix' 143D 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 A DA 13 1_555 -3.003 -7.620 -0.197 35.525 -8.947 121.264 1 A_DA1:DA13_A A 1 ? A 13 ? ? ? 1 A DG 10 1_555 A DG 22 1_555 1.666 3.273 0.002 -8.966 21.990 -90.246 2 A_DG10:DG22_A A 10 ? A 22 ? 6 3 1 A DG 2 1_555 A DG 14 1_555 -1.993 -3.244 -0.484 24.687 -9.244 85.591 3 A_DG2:DG14_A A 2 ? A 14 ? 6 3 1 A DG 3 1_555 A DG 15 1_555 1.697 3.257 -0.081 11.096 -2.845 -92.763 4 A_DG3:DG15_A A 3 ? A 15 ? 6 3 1 A DT 6 1_555 A DA 19 1_555 -1.789 -0.043 -1.632 35.959 3.373 -37.446 5 A_DT6:DA19_A A 6 ? A 19 ? 20 1 1 A DG 16 1_555 A DG 20 1_555 -1.898 -3.082 0.049 1.672 -6.121 93.138 6 A_DG16:DG20_A A 16 ? A 20 ? 6 3 1 A DG 9 1_555 A DG 21 1_555 -1.654 -3.454 0.127 -11.990 -1.793 86.781 7 A_DG9:DG21_A A 9 ? A 21 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 A DA 13 1_555 A DG 10 1_555 A DG 22 1_555 -1.526 0.723 3.561 -3.531 9.043 -111.262 -0.552 -0.967 3.484 -5.472 -2.136 -111.543 1 AA_DA1DG10:DG22DA13_AA A 1 ? A 13 ? A 10 ? A 22 ? 1 A DG 10 1_555 A DG 22 1_555 A DG 2 1_555 A DG 14 1_555 1.649 3.268 0.487 -6.754 10.085 -177.365 -1.635 0.825 0.482 -5.044 -3.378 -177.380 2 AA_DG10DG2:DG14DG22_AA A 10 ? A 22 ? A 2 ? A 14 ? 1 A DG 2 1_555 A DG 14 1_555 A DG 3 1_555 A DG 15 1_555 -2.516 -2.450 0.850 -142.047 107.742 8.115 -1.629 0.726 0.583 54.353 71.658 178.290 3 AA_DG2DG3:DG15DG14_AA A 2 ? A 14 ? A 3 ? A 15 ? 1 A DT 6 1_555 A DA 19 1_555 A DG 16 1_555 A DG 20 1_555 -1.364 0.486 -2.309 -3.040 16.788 156.237 0.284 0.703 -2.285 8.575 1.553 156.504 4 AA_DT6DG16:DG20DA19_AA A 6 ? A 19 ? A 16 ? A 20 ? 1 A DG 16 1_555 A DG 20 1_555 A DG 9 1_555 A DG 21 1_555 -3.702 -2.752 -1.675 -45.020 -167.615 109.643 -1.524 1.892 0.712 -84.375 22.662 176.288 5 AA_DG16DG9:DG21DG20_AA A 16 ? A 20 ? A 9 ? A 21 ? # _atom_sites.entry_id 143D _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_