data_161D
# 
_entry.id   161D 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.385 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   161D         pdb_0000161d 10.2210/pdb161d/pdb 
RCSB  AHJ052       ?            ?                   
WWPDB D_1000170140 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1994-05-18 
2 'Structure model' 1 1 2008-05-22 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2024-02-07 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Database references'       
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' chem_comp_atom 
2 4 'Structure model' chem_comp_bond 
3 4 'Structure model' database_2     
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 4 'Structure model' '_database_2.pdbx_DOI'                
2 4 'Structure model' '_database_2.pdbx_database_accession' 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        161D 
_pdbx_database_status.recvd_initial_deposition_date   1994-02-10 
_pdbx_database_status.deposit_site                    BNL 
_pdbx_database_status.process_site                    NDB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Ban, C.'           1 
'Ramakrishnan, B.'  2 
'Sundaralingam, M.' 3 
# 
_citation.id                        primary 
_citation.title                     
;A single 2'-hydroxyl group converts B-DNA to A-DNA. Crystal structure of the DNA-RNA chimeric decamer duplex d(CCGGC)r(G)d(CCGG) with a novel intermolecular G-C base-paired quadruplet.
;
_citation.journal_abbrev            J.Mol.Biol. 
_citation.journal_volume            236 
_citation.page_first                275 
_citation.page_last                 285 
_citation.year                      1994 
_citation.journal_id_ASTM           JMOBAK 
_citation.country                   UK 
_citation.journal_id_ISSN           0022-2836 
_citation.journal_id_CSD            0070 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   7508984 
_citation.pdbx_database_id_DOI      10.1006/jmbi.1994.1134 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Ban, C.'           1 ? 
primary 'Ramakrishnan, B.'  2 ? 
primary 'Sundaralingam, M.' 3 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer syn 
;DNA/RNA (5'-D(*CP*CP*GP*GP*CP*)-R(*GP*)-D(*CP*CP*GP*G)-3')
;
3062.980 2  ? ? ? ? 
2 water   nat water                                                        18.015   61 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           'polydeoxyribonucleotide/polyribonucleotide hybrid' 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DC)(DC)(DG)(DG)(DC)G(DC)(DC)(DG)(DG)' 
_entity_poly.pdbx_seq_one_letter_code_can   CCGGCGCCGG 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
_pdbx_entity_nonpoly.entity_id   2 
_pdbx_entity_nonpoly.name        water 
_pdbx_entity_nonpoly.comp_id     HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DC n 
1 2  DC n 
1 3  DG n 
1 4  DG n 
1 5  DC n 
1 6  G  n 
1 7  DC n 
1 8  DC n 
1 9  DG n 
1 10 DG n 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
G   'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE"         ? 'C10 H14 N5 O8 P' 363.221 
HOH non-polymer   . WATER                                ? 'H2 O'            18.015  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DC 1  1  1  DC C A . n 
A 1 2  DC 2  2  2  DC C A . n 
A 1 3  DG 3  3  3  DG G A . n 
A 1 4  DG 4  4  4  DG G A . n 
A 1 5  DC 5  5  5  DC C A . n 
A 1 6  G  6  6  6  G  G A . n 
A 1 7  DC 7  7  7  DC C A . n 
A 1 8  DC 8  8  8  DC C A . n 
A 1 9  DG 9  9  9  DG G A . n 
A 1 10 DG 10 10 10 DG G A . n 
B 1 1  DC 1  11 11 DC C B . n 
B 1 2  DC 2  12 12 DC C B . n 
B 1 3  DG 3  13 13 DG G B . n 
B 1 4  DG 4  14 14 DG G B . n 
B 1 5  DC 5  15 15 DC C B . n 
B 1 6  G  6  16 16 G  G B . n 
B 1 7  DC 7  17 17 DC C B . n 
B 1 8  DC 8  18 18 DC C B . n 
B 1 9  DG 9  19 19 DG G B . n 
B 1 10 DG 10 20 20 DG G B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 HOH 1  21 21 HOH HOH A . 
C 2 HOH 2  22 22 HOH HOH A . 
C 2 HOH 3  23 23 HOH HOH A . 
C 2 HOH 4  24 24 HOH HOH A . 
C 2 HOH 5  26 26 HOH HOH A . 
C 2 HOH 6  27 27 HOH HOH A . 
C 2 HOH 7  30 30 HOH HOH A . 
C 2 HOH 8  31 31 HOH HOH A . 
C 2 HOH 9  33 33 HOH HOH A . 
C 2 HOH 10 35 35 HOH HOH A . 
C 2 HOH 11 36 36 HOH HOH A . 
C 2 HOH 12 37 37 HOH HOH A . 
C 2 HOH 13 38 38 HOH HOH A . 
C 2 HOH 14 39 39 HOH HOH A . 
C 2 HOH 15 41 41 HOH HOH A . 
C 2 HOH 16 44 44 HOH HOH A . 
C 2 HOH 17 47 47 HOH HOH A . 
C 2 HOH 18 48 48 HOH HOH A . 
C 2 HOH 19 49 49 HOH HOH A . 
C 2 HOH 20 50 50 HOH HOH A . 
C 2 HOH 21 51 51 HOH HOH A . 
C 2 HOH 22 55 55 HOH HOH A . 
C 2 HOH 23 58 58 HOH HOH A . 
C 2 HOH 24 66 66 HOH HOH A . 
C 2 HOH 25 68 68 HOH HOH A . 
C 2 HOH 26 75 75 HOH HOH A . 
C 2 HOH 27 76 76 HOH HOH A . 
C 2 HOH 28 78 78 HOH HOH A . 
C 2 HOH 29 79 79 HOH HOH A . 
C 2 HOH 30 81 81 HOH HOH A . 
D 2 HOH 1  25 25 HOH HOH B . 
D 2 HOH 2  28 28 HOH HOH B . 
D 2 HOH 3  29 29 HOH HOH B . 
D 2 HOH 4  32 32 HOH HOH B . 
D 2 HOH 5  34 34 HOH HOH B . 
D 2 HOH 6  40 40 HOH HOH B . 
D 2 HOH 7  42 42 HOH HOH B . 
D 2 HOH 8  43 43 HOH HOH B . 
D 2 HOH 9  45 45 HOH HOH B . 
D 2 HOH 10 46 46 HOH HOH B . 
D 2 HOH 11 52 52 HOH HOH B . 
D 2 HOH 12 53 53 HOH HOH B . 
D 2 HOH 13 54 54 HOH HOH B . 
D 2 HOH 14 56 56 HOH HOH B . 
D 2 HOH 15 57 57 HOH HOH B . 
D 2 HOH 16 59 59 HOH HOH B . 
D 2 HOH 17 60 60 HOH HOH B . 
D 2 HOH 18 61 61 HOH HOH B . 
D 2 HOH 19 62 62 HOH HOH B . 
D 2 HOH 20 63 63 HOH HOH B . 
D 2 HOH 21 64 64 HOH HOH B . 
D 2 HOH 22 65 65 HOH HOH B . 
D 2 HOH 23 67 67 HOH HOH B . 
D 2 HOH 24 69 69 HOH HOH B . 
D 2 HOH 25 70 70 HOH HOH B . 
D 2 HOH 26 71 71 HOH HOH B . 
D 2 HOH 27 72 72 HOH HOH B . 
D 2 HOH 28 73 73 HOH HOH B . 
D 2 HOH 29 74 74 HOH HOH B . 
D 2 HOH 30 77 77 HOH HOH B . 
D 2 HOH 31 80 80 HOH HOH B . 
# 
_software.name             X-PLOR 
_software.classification   refinement 
_software.version          . 
_software.citation_id      ? 
_software.pdbx_ordinal     1 
# 
_cell.entry_id           161D 
_cell.length_a           26.630 
_cell.length_b           45.240 
_cell.length_c           47.990 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              8 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         161D 
_symmetry.space_group_name_H-M             'P 21 21 21' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                19 
# 
_exptl.entry_id          161D 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   ? 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.36 
_exptl_crystal.density_percent_sol   47.87 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            ? 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.00 
_exptl_crystal_grow.pdbx_details    'pH 7.00, VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 WATER           ? ? ? 
1 2 1 'NA CACODYLATE' ? ? ? 
1 3 1 SPERMINE_HCL    ? ? ? 
1 4 2 WATER           ? ? ? 
1 5 2 MPD             ? ? ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           ? 
_diffrn.ambient_temp_details   'ROOM TEMPERATURE' 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'AREA DETECTOR' 
_diffrn_detector.type                   SIEMENS-NICOLET 
_diffrn_detector.pdbx_collection_date   ? 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   ? 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             ? 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   . 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      'ROTATING ANODE' 
_diffrn_source.type                        MACSCIENCE 
_diffrn_source.pdbx_synchrotron_site       ? 
_diffrn_source.pdbx_synchrotron_beamline   ? 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     161D 
_reflns.observed_criterion_sigma_I   1.000 
_reflns.observed_criterion_sigma_F   ? 
_reflns.d_resolution_low             ? 
_reflns.d_resolution_high            1.900 
_reflns.number_obs                   2837 
_reflns.number_all                   8769 
_reflns.percent_possible_obs         ? 
_reflns.pdbx_Rmerge_I_obs            ? 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_refine.entry_id                                 161D 
_refine.ls_number_reflns_obs                     2753 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          1.000 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             8.000 
_refine.ls_d_res_high                            1.900 
_refine.ls_percent_reflns_obs                    ? 
_refine.ls_R_factor_obs                          0.1360000 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       0.1360000 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   406 
_refine_hist.pdbx_number_atoms_ligand         0 
_refine_hist.number_atoms_solvent             61 
_refine_hist.number_atoms_total               467 
_refine_hist.d_res_high                       1.900 
_refine_hist.d_res_low                        8.000 
# 
_database_PDB_matrix.entry_id          161D 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  161D 
_struct.title                     
;A SINGLE 2'-HYDROXYL GROUP CONVERTS B-DNA TO A-DNA: CRYSTAL STRUCTURE OF THE DNA-RNA CHIMERIC DECAMER DUPLEX D(CCGGC)R(G)D(CCGG) WITH A NOVEL INTERMOLECULAR G.C BASE-PAIRED QUADRUPLET
;
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        161D 
_struct_keywords.pdbx_keywords   'DNA-RNA HYBRID' 
_struct_keywords.text            'A-DNA/RNA, DOUBLE HELIX, DNA-RNA HYBRID' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 2 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    161D 
_struct_ref.pdbx_db_accession          161D 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 161D A 1 ? 10 ? 161D 1  ? 10 ? 1  10 
2 1 161D B 1 ? 10 ? 161D 11 ? 20 ? 11 20 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id   1 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
hydrog1  hydrog ? ? A DC 1  N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1  B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog2  hydrog ? ? A DC 1  N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1  B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog3  hydrog ? ? A DC 1  O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1  B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog4  hydrog ? ? A DC 2  N3 ? ? ? 1_555 B DG 9  N1 ? ? A DC 2  B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog5  hydrog ? ? A DC 2  N4 ? ? ? 1_555 B DG 9  O6 ? ? A DC 2  B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog6  hydrog ? ? A DC 2  O2 ? ? ? 1_555 B DG 9  N2 ? ? A DC 2  B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog7  hydrog ? ? A DG 3  N1 ? ? ? 1_555 B DC 8  N3 ? ? A DG 3  B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog8  hydrog ? ? A DG 3  N2 ? ? ? 1_555 B DC 8  O2 ? ? A DG 3  B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog9  hydrog ? ? A DG 3  O6 ? ? ? 1_555 B DC 8  N4 ? ? A DG 3  B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog10 hydrog ? ? A DG 4  N1 ? ? ? 1_555 B DC 7  N3 ? ? A DG 4  B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog11 hydrog ? ? A DG 4  N2 ? ? ? 1_555 B DC 7  O2 ? ? A DG 4  B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog12 hydrog ? ? A DG 4  O6 ? ? ? 1_555 B DC 7  N4 ? ? A DG 4  B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog13 hydrog ? ? A DC 5  N3 ? ? ? 1_555 B G  6  N1 ? ? A DC 5  B G  16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog14 hydrog ? ? A DC 5  N4 ? ? ? 1_555 B G  6  O6 ? ? A DC 5  B G  16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog15 hydrog ? ? A DC 5  O2 ? ? ? 1_555 B G  6  N2 ? ? A DC 5  B G  16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog16 hydrog ? ? A G  6  N1 ? ? ? 1_555 B DC 5  N3 ? ? A G  6  B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog17 hydrog ? ? A G  6  N2 ? ? ? 1_555 B DC 5  O2 ? ? A G  6  B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog18 hydrog ? ? A G  6  O6 ? ? ? 1_555 B DC 5  N4 ? ? A G  6  B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog19 hydrog ? ? A DC 7  N3 ? ? ? 1_555 B DG 4  N1 ? ? A DC 7  B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog20 hydrog ? ? A DC 7  N4 ? ? ? 1_555 B DG 4  O6 ? ? A DC 7  B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog21 hydrog ? ? A DC 7  O2 ? ? ? 1_555 B DG 4  N2 ? ? A DC 7  B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog22 hydrog ? ? A DC 8  N3 ? ? ? 1_555 B DG 3  N1 ? ? A DC 8  B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog23 hydrog ? ? A DC 8  N4 ? ? ? 1_555 B DG 3  O6 ? ? A DC 8  B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog24 hydrog ? ? A DC 8  O2 ? ? ? 1_555 B DG 3  N2 ? ? A DC 8  B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog25 hydrog ? ? A DG 9  N1 ? ? ? 1_555 B DC 2  N3 ? ? A DG 9  B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog26 hydrog ? ? A DG 9  N2 ? ? ? 1_555 B DC 2  O2 ? ? A DG 9  B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog27 hydrog ? ? A DG 9  O6 ? ? ? 1_555 B DC 2  N4 ? ? A DG 9  B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog28 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1  N3 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog29 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1  O2 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog30 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1  N4 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
# 
_struct_conn_type.id          hydrog 
_struct_conn_type.criteria    ? 
_struct_conn_type.reference   ? 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1 1 "C3'" A DC 7 ? ? "C2'" A DC 7 ? ? 1.466 1.516 -0.050 0.008 N 
2 1 P     A DC 8 ? ? "O5'" A DC 8 ? ? 1.661 1.593 0.068  0.010 N 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 "O4'" A DC 1  ? ? "C1'" A DC 1  ? ? N1    A DC 1  ? ? 111.93 108.30 3.63   0.30 N 
2  1 C2    A DC 1  ? ? N3    A DC 1  ? ? C4    A DC 1  ? ? 123.13 119.90 3.23   0.50 N 
3  1 "O3'" A DC 1  ? ? P     A DC 2  ? ? "O5'" A DC 2  ? ? 116.36 104.00 12.36  1.90 Y 
4  1 "O4'" A DC 2  ? ? "C1'" A DC 2  ? ? N1    A DC 2  ? ? 112.66 108.30 4.36   0.30 N 
5  1 N1    A DC 2  ? ? C2    A DC 2  ? ? O2    A DC 2  ? ? 122.91 118.90 4.01   0.60 N 
6  1 N3    A DC 2  ? ? C2    A DC 2  ? ? O2    A DC 2  ? ? 117.53 121.90 -4.37  0.70 N 
7  1 "O3'" A DC 2  ? ? P     A DG 3  ? ? "O5'" A DG 3  ? ? 123.09 104.00 19.09  1.90 Y 
8  1 "C4'" A DG 3  ? ? "C3'" A DG 3  ? ? "C2'" A DG 3  ? ? 94.29  102.20 -7.91  0.70 N 
9  1 "O3'" A DG 4  ? ? P     A DC 5  ? ? OP2   A DC 5  ? ? 125.72 110.50 15.22  1.10 Y 
10 1 "O3'" A DG 4  ? ? P     A DC 5  ? ? OP1   A DC 5  ? ? 88.11  105.20 -17.09 2.20 Y 
11 1 "O4'" A DC 5  ? ? "C1'" A DC 5  ? ? N1    A DC 5  ? ? 110.92 108.30 2.62   0.30 N 
12 1 "O3'" A DC 5  ? ? P     A G  6  ? ? OP2   A G  6  ? ? 122.00 110.50 11.50  1.10 Y 
13 1 "O3'" A DC 5  ? ? P     A G  6  ? ? OP1   A G  6  ? ? 87.88  105.20 -17.32 2.20 Y 
14 1 "O4'" A DC 7  ? ? "C1'" A DC 7  ? ? N1    A DC 7  ? ? 113.90 108.30 5.60   0.30 N 
15 1 "O3'" A DC 7  ? ? P     A DC 8  ? ? OP2   A DC 8  ? ? 121.35 110.50 10.85  1.10 Y 
16 1 "C4'" A DC 8  ? ? "C3'" A DC 8  ? ? "C2'" A DC 8  ? ? 94.81  102.20 -7.39  0.70 N 
17 1 "O4'" A DC 8  ? ? "C1'" A DC 8  ? ? N1    A DC 8  ? ? 112.19 108.30 3.89   0.30 N 
18 1 "C4'" A DG 9  ? ? "C3'" A DG 9  ? ? "C2'" A DG 9  ? ? 97.07  102.20 -5.13  0.70 N 
19 1 "O4'" A DG 9  ? ? "C1'" A DG 9  ? ? N9    A DG 9  ? ? 111.51 108.30 3.21   0.30 N 
20 1 "O3'" A DG 9  ? ? P     A DG 10 ? ? OP2   A DG 10 ? ? 120.94 110.50 10.44  1.10 Y 
21 1 "O3'" A DG 9  ? ? P     A DG 10 ? ? OP1   A DG 10 ? ? 89.60  105.20 -15.60 2.20 Y 
22 1 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1    B DC 11 ? ? 110.51 108.30 2.21   0.30 N 
23 1 "O3'" B DC 11 ? ? P     B DC 12 ? ? OP2   B DC 12 ? ? 87.08  105.20 -18.12 2.20 Y 
24 1 "O3'" B DC 11 ? ? P     B DC 12 ? ? OP1   B DC 12 ? ? 121.51 110.50 11.01  1.10 Y 
25 1 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? N1    B DC 12 ? ? 111.28 108.30 2.98   0.30 N 
26 1 N1    B DC 12 ? ? C2    B DC 12 ? ? O2    B DC 12 ? ? 124.06 118.90 5.16   0.60 N 
27 1 N3    B DC 12 ? ? C2    B DC 12 ? ? O2    B DC 12 ? ? 117.43 121.90 -4.47  0.70 N 
28 1 "O4'" B DG 13 ? ? "C4'" B DG 13 ? ? "C3'" B DG 13 ? ? 101.61 104.50 -2.89  0.40 N 
29 1 "C4'" B DG 13 ? ? "C3'" B DG 13 ? ? "C2'" B DG 13 ? ? 95.66  102.20 -6.54  0.70 N 
30 1 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9    B DG 13 ? ? 112.69 108.30 4.39   0.30 N 
31 1 "O3'" B DG 13 ? ? P     B DG 14 ? ? OP1   B DG 14 ? ? 89.49  105.20 -15.71 2.20 Y 
32 1 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1    B DC 15 ? ? 112.95 108.30 4.65   0.30 N 
33 1 "O3'" B DC 15 ? ? P     B G  16 ? ? OP2   B G  16 ? ? 132.00 110.50 21.50  1.10 Y 
34 1 "O3'" B DC 15 ? ? P     B G  16 ? ? OP1   B G  16 ? ? 77.03  105.20 -28.17 2.20 Y 
35 1 "O3'" B G  16 ? ? P     B DC 17 ? ? OP2   B DC 17 ? ? 132.30 110.50 21.80  1.10 Y 
36 1 "O3'" B G  16 ? ? P     B DC 17 ? ? OP1   B DC 17 ? ? 83.76  105.20 -21.44 2.20 Y 
37 1 "O4'" B DC 17 ? ? "C1'" B DC 17 ? ? N1    B DC 17 ? ? 111.52 108.30 3.22   0.30 N 
38 1 "O3'" B DC 17 ? ? P     B DC 18 ? ? OP2   B DC 18 ? ? 118.60 110.50 8.10   1.10 Y 
39 1 "O3'" B DC 17 ? ? P     B DC 18 ? ? OP1   B DC 18 ? ? 91.34  105.20 -13.86 2.20 Y 
40 1 "C4'" B DC 18 ? ? "C3'" B DC 18 ? ? "C2'" B DC 18 ? ? 97.54  102.20 -4.66  0.70 N 
41 1 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1    B DC 18 ? ? 115.73 108.30 7.43   0.30 N 
42 1 "C4'" B DG 19 ? ? "C3'" B DG 19 ? ? "C2'" B DG 19 ? ? 96.71  102.20 -5.49  0.70 N 
43 1 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9    B DG 19 ? ? 110.98 108.30 2.68   0.30 N 
44 1 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9    B DG 20 ? ? 112.84 108.30 4.54   0.30 N 
# 
loop_
_pdbx_validate_planes.id 
_pdbx_validate_planes.PDB_model_num 
_pdbx_validate_planes.auth_comp_id 
_pdbx_validate_planes.auth_asym_id 
_pdbx_validate_planes.auth_seq_id 
_pdbx_validate_planes.PDB_ins_code 
_pdbx_validate_planes.label_alt_id 
_pdbx_validate_planes.rmsd 
_pdbx_validate_planes.type 
1 1 DG A 3  ? ? 0.081 'SIDE CHAIN' 
2 1 DG B 19 ? ? 0.065 'SIDE CHAIN' 
# 
loop_
_refine_B_iso.class 
_refine_B_iso.details 
_refine_B_iso.treatment 
_refine_B_iso.pdbx_refine_id 
'ALL ATOMS'  TR isotropic 'X-RAY DIFFRACTION' 
'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' 
# 
loop_
_refine_occupancy.class 
_refine_occupancy.treatment 
_refine_occupancy.pdbx_refine_id 
'ALL ATOMS'  fix 'X-RAY DIFFRACTION' 
'ALL WATERS' fix 'X-RAY DIFFRACTION' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DC  OP3    O N N 1   
DC  P      P N N 2   
DC  OP1    O N N 3   
DC  OP2    O N N 4   
DC  "O5'"  O N N 5   
DC  "C5'"  C N N 6   
DC  "C4'"  C N R 7   
DC  "O4'"  O N N 8   
DC  "C3'"  C N S 9   
DC  "O3'"  O N N 10  
DC  "C2'"  C N N 11  
DC  "C1'"  C N R 12  
DC  N1     N N N 13  
DC  C2     C N N 14  
DC  O2     O N N 15  
DC  N3     N N N 16  
DC  C4     C N N 17  
DC  N4     N N N 18  
DC  C5     C N N 19  
DC  C6     C N N 20  
DC  HOP3   H N N 21  
DC  HOP2   H N N 22  
DC  "H5'"  H N N 23  
DC  "H5''" H N N 24  
DC  "H4'"  H N N 25  
DC  "H3'"  H N N 26  
DC  "HO3'" H N N 27  
DC  "H2'"  H N N 28  
DC  "H2''" H N N 29  
DC  "H1'"  H N N 30  
DC  H41    H N N 31  
DC  H42    H N N 32  
DC  H5     H N N 33  
DC  H6     H N N 34  
DG  OP3    O N N 35  
DG  P      P N N 36  
DG  OP1    O N N 37  
DG  OP2    O N N 38  
DG  "O5'"  O N N 39  
DG  "C5'"  C N N 40  
DG  "C4'"  C N R 41  
DG  "O4'"  O N N 42  
DG  "C3'"  C N S 43  
DG  "O3'"  O N N 44  
DG  "C2'"  C N N 45  
DG  "C1'"  C N R 46  
DG  N9     N Y N 47  
DG  C8     C Y N 48  
DG  N7     N Y N 49  
DG  C5     C Y N 50  
DG  C6     C N N 51  
DG  O6     O N N 52  
DG  N1     N N N 53  
DG  C2     C N N 54  
DG  N2     N N N 55  
DG  N3     N N N 56  
DG  C4     C Y N 57  
DG  HOP3   H N N 58  
DG  HOP2   H N N 59  
DG  "H5'"  H N N 60  
DG  "H5''" H N N 61  
DG  "H4'"  H N N 62  
DG  "H3'"  H N N 63  
DG  "HO3'" H N N 64  
DG  "H2'"  H N N 65  
DG  "H2''" H N N 66  
DG  "H1'"  H N N 67  
DG  H8     H N N 68  
DG  H1     H N N 69  
DG  H21    H N N 70  
DG  H22    H N N 71  
G   OP3    O N N 72  
G   P      P N N 73  
G   OP1    O N N 74  
G   OP2    O N N 75  
G   "O5'"  O N N 76  
G   "C5'"  C N N 77  
G   "C4'"  C N R 78  
G   "O4'"  O N N 79  
G   "C3'"  C N S 80  
G   "O3'"  O N N 81  
G   "C2'"  C N R 82  
G   "O2'"  O N N 83  
G   "C1'"  C N R 84  
G   N9     N Y N 85  
G   C8     C Y N 86  
G   N7     N Y N 87  
G   C5     C Y N 88  
G   C6     C N N 89  
G   O6     O N N 90  
G   N1     N N N 91  
G   C2     C N N 92  
G   N2     N N N 93  
G   N3     N N N 94  
G   C4     C Y N 95  
G   HOP3   H N N 96  
G   HOP2   H N N 97  
G   "H5'"  H N N 98  
G   "H5''" H N N 99  
G   "H4'"  H N N 100 
G   "H3'"  H N N 101 
G   "HO3'" H N N 102 
G   "H2'"  H N N 103 
G   "HO2'" H N N 104 
G   "H1'"  H N N 105 
G   H8     H N N 106 
G   H1     H N N 107 
G   H21    H N N 108 
G   H22    H N N 109 
HOH O      O N N 110 
HOH H1     H N N 111 
HOH H2     H N N 112 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DC  OP3   P      sing N N 1   
DC  OP3   HOP3   sing N N 2   
DC  P     OP1    doub N N 3   
DC  P     OP2    sing N N 4   
DC  P     "O5'"  sing N N 5   
DC  OP2   HOP2   sing N N 6   
DC  "O5'" "C5'"  sing N N 7   
DC  "C5'" "C4'"  sing N N 8   
DC  "C5'" "H5'"  sing N N 9   
DC  "C5'" "H5''" sing N N 10  
DC  "C4'" "O4'"  sing N N 11  
DC  "C4'" "C3'"  sing N N 12  
DC  "C4'" "H4'"  sing N N 13  
DC  "O4'" "C1'"  sing N N 14  
DC  "C3'" "O3'"  sing N N 15  
DC  "C3'" "C2'"  sing N N 16  
DC  "C3'" "H3'"  sing N N 17  
DC  "O3'" "HO3'" sing N N 18  
DC  "C2'" "C1'"  sing N N 19  
DC  "C2'" "H2'"  sing N N 20  
DC  "C2'" "H2''" sing N N 21  
DC  "C1'" N1     sing N N 22  
DC  "C1'" "H1'"  sing N N 23  
DC  N1    C2     sing N N 24  
DC  N1    C6     sing N N 25  
DC  C2    O2     doub N N 26  
DC  C2    N3     sing N N 27  
DC  N3    C4     doub N N 28  
DC  C4    N4     sing N N 29  
DC  C4    C5     sing N N 30  
DC  N4    H41    sing N N 31  
DC  N4    H42    sing N N 32  
DC  C5    C6     doub N N 33  
DC  C5    H5     sing N N 34  
DC  C6    H6     sing N N 35  
DG  OP3   P      sing N N 36  
DG  OP3   HOP3   sing N N 37  
DG  P     OP1    doub N N 38  
DG  P     OP2    sing N N 39  
DG  P     "O5'"  sing N N 40  
DG  OP2   HOP2   sing N N 41  
DG  "O5'" "C5'"  sing N N 42  
DG  "C5'" "C4'"  sing N N 43  
DG  "C5'" "H5'"  sing N N 44  
DG  "C5'" "H5''" sing N N 45  
DG  "C4'" "O4'"  sing N N 46  
DG  "C4'" "C3'"  sing N N 47  
DG  "C4'" "H4'"  sing N N 48  
DG  "O4'" "C1'"  sing N N 49  
DG  "C3'" "O3'"  sing N N 50  
DG  "C3'" "C2'"  sing N N 51  
DG  "C3'" "H3'"  sing N N 52  
DG  "O3'" "HO3'" sing N N 53  
DG  "C2'" "C1'"  sing N N 54  
DG  "C2'" "H2'"  sing N N 55  
DG  "C2'" "H2''" sing N N 56  
DG  "C1'" N9     sing N N 57  
DG  "C1'" "H1'"  sing N N 58  
DG  N9    C8     sing Y N 59  
DG  N9    C4     sing Y N 60  
DG  C8    N7     doub Y N 61  
DG  C8    H8     sing N N 62  
DG  N7    C5     sing Y N 63  
DG  C5    C6     sing N N 64  
DG  C5    C4     doub Y N 65  
DG  C6    O6     doub N N 66  
DG  C6    N1     sing N N 67  
DG  N1    C2     sing N N 68  
DG  N1    H1     sing N N 69  
DG  C2    N2     sing N N 70  
DG  C2    N3     doub N N 71  
DG  N2    H21    sing N N 72  
DG  N2    H22    sing N N 73  
DG  N3    C4     sing N N 74  
G   OP3   P      sing N N 75  
G   OP3   HOP3   sing N N 76  
G   P     OP1    doub N N 77  
G   P     OP2    sing N N 78  
G   P     "O5'"  sing N N 79  
G   OP2   HOP2   sing N N 80  
G   "O5'" "C5'"  sing N N 81  
G   "C5'" "C4'"  sing N N 82  
G   "C5'" "H5'"  sing N N 83  
G   "C5'" "H5''" sing N N 84  
G   "C4'" "O4'"  sing N N 85  
G   "C4'" "C3'"  sing N N 86  
G   "C4'" "H4'"  sing N N 87  
G   "O4'" "C1'"  sing N N 88  
G   "C3'" "O3'"  sing N N 89  
G   "C3'" "C2'"  sing N N 90  
G   "C3'" "H3'"  sing N N 91  
G   "O3'" "HO3'" sing N N 92  
G   "C2'" "O2'"  sing N N 93  
G   "C2'" "C1'"  sing N N 94  
G   "C2'" "H2'"  sing N N 95  
G   "O2'" "HO2'" sing N N 96  
G   "C1'" N9     sing N N 97  
G   "C1'" "H1'"  sing N N 98  
G   N9    C8     sing Y N 99  
G   N9    C4     sing Y N 100 
G   C8    N7     doub Y N 101 
G   C8    H8     sing N N 102 
G   N7    C5     sing Y N 103 
G   C5    C6     sing N N 104 
G   C5    C4     doub Y N 105 
G   C6    O6     doub N N 106 
G   C6    N1     sing N N 107 
G   N1    C2     sing N N 108 
G   N1    H1     sing N N 109 
G   C2    N2     sing N N 110 
G   C2    N3     doub N N 111 
G   N2    H21    sing N N 112 
G   N2    H22    sing N N 113 
G   N3    C4     sing N N 114 
HOH O     H1     sing N N 115 
HOH O     H2     sing N N 116 
# 
_ndb_struct_conf_na.entry_id   161D 
_ndb_struct_conf_na.feature    'a-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DC 1  1_555 B DG 10 1_555 0.410  -0.045 0.175  0.449  -6.738  -2.541 1  A_DC1:DG20_B  A 1  ? B 20 ? 19 1 
1 A DC 2  1_555 B DG 9  1_555 0.041  -0.047 -0.125 8.090  -10.335 1.040  2  A_DC2:DG19_B  A 2  ? B 19 ? 19 1 
1 A DG 3  1_555 B DC 8  1_555 -0.149 -0.169 0.072  -4.990 -11.364 0.561  3  A_DG3:DC18_B  A 3  ? B 18 ? 19 1 
1 A DG 4  1_555 B DC 7  1_555 -0.382 -0.234 -0.202 -8.077 -11.626 -3.747 4  A_DG4:DC17_B  A 4  ? B 17 ? 19 1 
1 A DC 5  1_555 B G  6  1_555 0.446  -0.123 -0.065 -2.196 -11.490 2.482  5  A_DC5:G16_B   A 5  ? B 16 ? 19 1 
1 A G  6  1_555 B DC 5  1_555 0.022  -0.147 -0.212 -3.933 -13.506 -3.519 6  A_G6:DC15_B   A 6  ? B 15 ? 19 1 
1 A DC 7  1_555 B DG 4  1_555 0.317  0.119  -0.015 3.721  -5.941  2.750  7  A_DC7:DG14_B  A 7  ? B 14 ? 19 1 
1 A DC 8  1_555 B DG 3  1_555 0.386  -0.248 -0.090 1.243  -7.385  -0.406 8  A_DC8:DG13_B  A 8  ? B 13 ? 19 1 
1 A DG 9  1_555 B DC 2  1_555 -0.540 -0.018 -0.170 -9.823 -8.985  2.372  9  A_DG9:DC12_B  A 9  ? B 12 ? 19 1 
1 A DG 10 1_555 B DC 1  1_555 0.342  -0.106 0.131  5.107  4.386   -1.088 10 A_DG10:DC11_B A 10 ? B 11 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DC 1 1_555 B DG 10 1_555 A DC 2  1_555 B DG 9 1_555 0.690  -1.876 3.195 2.104  1.172  32.067 -3.591 -0.879 3.164 2.118  -3.802 
32.155 1 AA_DC1DC2:DG19DG20_BB  A 1 ? B 20 ? A 2  ? B 19 ? 
1 A DC 2 1_555 B DG 9  1_555 A DG 3  1_555 B DC 8 1_555 -0.152 -2.115 3.699 -2.499 8.568  29.012 -5.843 -0.234 2.970 16.613 4.846  
30.325 2 AA_DC2DG3:DC18DG19_BB  A 2 ? B 19 ? A 3  ? B 18 ? 
1 A DG 3 1_555 B DC 8  1_555 A DG 4  1_555 B DC 7 1_555 -1.521 -1.641 3.406 -2.103 6.190  32.626 -3.911 2.302  3.139 10.883 3.697  
33.258 3 AA_DG3DG4:DC17DC18_BB  A 3 ? B 18 ? A 4  ? B 17 ? 
1 A DG 4 1_555 B DC 7  1_555 A DC 5  1_555 B G  6 1_555 1.088  -1.516 3.327 1.858  9.710  29.722 -4.567 -1.682 2.768 18.303 -3.502 
31.288 4 AA_DG4DC5:G16DC17_BB   A 4 ? B 17 ? A 5  ? B 16 ? 
1 A DC 5 1_555 B G  6  1_555 A G  6  1_555 B DC 5 1_555 -0.707 -1.587 3.438 0.158  17.362 29.670 -5.226 1.222  2.199 30.809 -0.281 
34.278 5 AA_DC5G6:DC15G16_BB    A 5 ? B 16 ? A 6  ? B 15 ? 
1 A G  6 1_555 B DC 5  1_555 A DC 7  1_555 B DG 4 1_555 0.904  -1.356 3.233 -1.764 5.270  29.627 -3.624 -2.079 2.896 10.194 3.413  
30.133 6 AA_G6DC7:DG14DC15_BB   A 6 ? B 15 ? A 7  ? B 14 ? 
1 A DC 7 1_555 B DG 4  1_555 A DC 8  1_555 B DG 3 1_555 -0.051 -2.142 3.492 0.835  3.590  28.560 -5.133 0.295  3.201 7.239  -1.684 
28.792 7 AA_DC7DC8:DG13DG14_BB  A 7 ? B 14 ? A 8  ? B 13 ? 
1 A DC 8 1_555 B DG 3  1_555 A DG 9  1_555 B DC 2 1_555 -0.069 -2.166 3.738 1.017  7.265  26.281 -6.509 0.415  3.035 15.595 -2.184 
27.269 8 AA_DC8DG9:DC12DG13_BB  A 8 ? B 13 ? A 9  ? B 12 ? 
1 A DG 9 1_555 B DC 2  1_555 A DG 10 1_555 B DC 1 1_555 -0.085 -1.925 3.059 1.220  1.059  34.227 -3.421 0.322  2.995 1.798  -2.071 
34.264 9 AA_DG9DG10:DC11DC12_BB A 9 ? B 12 ? A 10 ? B 11 ? 
# 
_atom_sites.entry_id                    161D 
_atom_sites.fract_transf_matrix[1][1]   0.037552 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.022104 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.020838 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
N 
O 
P 
# 
loop_