data_169D
# 
_entry.id   169D 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.392 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   169D         pdb_0000169d 10.2210/pdb169d/pdb 
WWPDB D_1000170154 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1994-07-31 
2 'Structure model' 1 1 2008-03-24 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2022-02-16 
5 'Structure model' 1 4 2024-05-22 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Database references'       
5 4 'Structure model' 'Derived calculations'      
6 4 'Structure model' Other                       
7 4 'Structure model' 'Structure summary'         
8 5 'Structure model' 'Data collection'           
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' database_2            
2 4 'Structure model' pdbx_database_status  
3 4 'Structure model' pdbx_nmr_software     
4 4 'Structure model' pdbx_struct_assembly  
5 4 'Structure model' pdbx_struct_oper_list 
6 4 'Structure model' struct_keywords       
7 5 'Structure model' chem_comp_atom        
8 5 'Structure model' chem_comp_bond        
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 4 'Structure model' '_database_2.pdbx_DOI'                
2 4 'Structure model' '_database_2.pdbx_database_accession' 
3 4 'Structure model' '_pdbx_database_status.process_site'  
4 4 'Structure model' '_pdbx_nmr_software.name'             
5 4 'Structure model' '_struct_keywords.text'               
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        169D 
_pdbx_database_status.recvd_initial_deposition_date   1994-04-11 
_pdbx_database_status.deposit_site                    ? 
_pdbx_database_status.process_site                    BNL 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Salazar, M.'    1 
'Fedoroff, O.Y.' 2 
'Zhu, L.'        3 
'Reid, B.R.'     4 
# 
_citation.id                        primary 
_citation.title                     
;The solution structure of the r(gcg)d(TATACCC):d(GGGTATACGC) Okazaki fragment contains two distinct duplex morphologies connected by a junction.
;
_citation.journal_abbrev            J.Mol.Biol. 
_citation.journal_volume            241 
_citation.page_first                440 
_citation.page_last                 455 
_citation.year                      1994 
_citation.journal_id_ASTM           JMOBAK 
_citation.country                   UK 
_citation.journal_id_ISSN           0022-2836 
_citation.journal_id_CSD            0070 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   8064857 
_citation.pdbx_database_id_DOI      10.1006/jmbi.1994.1519 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Salazar, M.'      1 ? 
primary 'Fedoroff, O.Y.u.' 2 ? 
primary 'Zhu, L.'          3 ? 
primary 'Reid, B.R.'       4 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer syn 
;DNA (5'-D(*GP*GP*GP*TP*AP*TP*AP*CP*GP*C)-3')
;
3085.029 1 ? ? ? ? 
2 polymer syn 
;DNA/RNA (5'-R(*GP*CP*G)-D(P*TP*AP*TP*AP*CP*CP*C)-3')
;
3052.981 1 ? ? ? ? 
# 
loop_
_entity_poly.entity_id 
_entity_poly.type 
_entity_poly.nstd_linkage 
_entity_poly.nstd_monomer 
_entity_poly.pdbx_seq_one_letter_code 
_entity_poly.pdbx_seq_one_letter_code_can 
_entity_poly.pdbx_strand_id 
_entity_poly.pdbx_target_identifier 
1 polydeoxyribonucleotide                             no no '(DG)(DG)(DG)(DT)(DA)(DT)(DA)(DC)(DG)(DC)' GGGTATACGC A ? 
2 'polydeoxyribonucleotide/polyribonucleotide hybrid' no no 'GCG(DT)(DA)(DT)(DA)(DC)(DC)(DC)'          GCGTATACCC B ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DG n 
1 2  DG n 
1 3  DG n 
1 4  DT n 
1 5  DA n 
1 6  DT n 
1 7  DA n 
1 8  DC n 
1 9  DG n 
1 10 DC n 
2 1  G  n 
2 2  C  n 
2 3  G  n 
2 4  DT n 
2 5  DA n 
2 6  DT n 
2 7  DA n 
2 8  DC n 
2 9  DC n 
2 10 DC n 
# 
loop_
_pdbx_entity_src_syn.entity_id 
_pdbx_entity_src_syn.pdbx_src_id 
_pdbx_entity_src_syn.pdbx_alt_source_flag 
_pdbx_entity_src_syn.pdbx_beg_seq_num 
_pdbx_entity_src_syn.pdbx_end_seq_num 
_pdbx_entity_src_syn.organism_scientific 
_pdbx_entity_src_syn.organism_common_name 
_pdbx_entity_src_syn.ncbi_taxonomy_id 
_pdbx_entity_src_syn.details 
1 1 sample ? ? ? ? ? 'CHEMICALLY SYNTHESIZED' 
2 1 sample ? ? ? ? ? 'CHEMICALLY SYNTHESIZED' 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
C  'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE"          ? 'C9 H14 N3 O8 P'  323.197 
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O7 P'  307.197 
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"         ? 'C10 H15 N2 O8 P' 322.208 
G  'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE"         ? 'C10 H14 N5 O8 P' 363.221 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DG 1  1  1  DG G A . n 
A 1 2  DG 2  2  2  DG G A . n 
A 1 3  DG 3  3  3  DG G A . n 
A 1 4  DT 4  4  4  DT T A . n 
A 1 5  DA 5  5  5  DA A A . n 
A 1 6  DT 6  6  6  DT T A . n 
A 1 7  DA 7  7  7  DA A A . n 
A 1 8  DC 8  8  8  DC C A . n 
A 1 9  DG 9  9  9  DG G A . n 
A 1 10 DC 10 10 10 DC C A . n 
B 2 1  G  1  11 11 G  G B . n 
B 2 2  C  2  12 12 C  C B . n 
B 2 3  G  3  13 13 G  G B . n 
B 2 4  DT 4  14 14 DT T B . n 
B 2 5  DA 5  15 15 DA A B . n 
B 2 6  DT 6  16 16 DT T B . n 
B 2 7  DA 7  17 17 DA A B . n 
B 2 8  DC 8  18 18 DC C B . n 
B 2 9  DC 9  19 19 DC C B . n 
B 2 10 DC 10 20 20 DC C B . n 
# 
_cell.entry_id           169D 
_cell.length_a           1.000 
_cell.length_b           1.000 
_cell.length_c           1.000 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              1 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         169D 
_symmetry.space_group_name_H-M             'P 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                1 
# 
_exptl.entry_id          169D 
_exptl.method            'SOLUTION NMR' 
_exptl.crystals_number   ? 
# 
_database_PDB_matrix.entry_id          169D 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  169D 
_struct.title                     
;THE SOLUTION STRUCTURE OF THE R(GCG)D(TATACCC):D(GGGTATACGC) OKAZAKI FRAGMENT CONTAINS TWO DISTINCT DUPLEX MORPHOLOGIES CONNECTED BY A JUNCTION
;
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        169D 
_struct_keywords.pdbx_keywords   'DNA-RNA HYBRID' 
_struct_keywords.text            'DOUBLE HELIX, DNA/RNA HYBRID, DNA-RNA HYBRID complex, DNA-RNA HYBRID' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
# 
loop_
_struct_ref.id 
_struct_ref.entity_id 
_struct_ref.db_name 
_struct_ref.db_code 
_struct_ref.pdbx_db_accession 
_struct_ref.pdbx_align_begin 
_struct_ref.pdbx_seq_one_letter_code 
_struct_ref.pdbx_db_isoform 
1 1 PDB 169D 169D ? ? ? 
2 2 PDB 169D 169D ? ? ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 169D A 1 ? 10 ? 169D 1  ? 10 ? 1  10 
2 2 169D B 1 ? 10 ? 169D 11 ? 20 ? 11 20 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id        1 
_struct_biol.details   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
hydrog1  hydrog ? ? A DG 1  N1 ? ? ? 1_555 B DC 10 N3 ? ? A DG 1  B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog2  hydrog ? ? A DG 1  N2 ? ? ? 1_555 B DC 10 O2 ? ? A DG 1  B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog3  hydrog ? ? A DG 1  O6 ? ? ? 1_555 B DC 10 N4 ? ? A DG 1  B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog4  hydrog ? ? A DG 2  N1 ? ? ? 1_555 B DC 9  N3 ? ? A DG 2  B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog5  hydrog ? ? A DG 2  N2 ? ? ? 1_555 B DC 9  O2 ? ? A DG 2  B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog6  hydrog ? ? A DG 2  O6 ? ? ? 1_555 B DC 9  N4 ? ? A DG 2  B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog7  hydrog ? ? A DG 3  N1 ? ? ? 1_555 B DC 8  N3 ? ? A DG 3  B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog8  hydrog ? ? A DG 3  N2 ? ? ? 1_555 B DC 8  O2 ? ? A DG 3  B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog9  hydrog ? ? A DG 3  O6 ? ? ? 1_555 B DC 8  N4 ? ? A DG 3  B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog10 hydrog ? ? A DT 4  N3 ? ? ? 1_555 B DA 7  N1 ? ? A DT 4  B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog11 hydrog ? ? A DT 4  O4 ? ? ? 1_555 B DA 7  N6 ? ? A DT 4  B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog12 hydrog ? ? A DA 5  N1 ? ? ? 1_555 B DT 6  N3 ? ? A DA 5  B DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog13 hydrog ? ? A DA 5  N6 ? ? ? 1_555 B DT 6  O4 ? ? A DA 5  B DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog14 hydrog ? ? A DT 6  N3 ? ? ? 1_555 B DA 5  N1 ? ? A DT 6  B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog15 hydrog ? ? A DT 6  O4 ? ? ? 1_555 B DA 5  N6 ? ? A DT 6  B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog16 hydrog ? ? A DA 7  N1 ? ? ? 1_555 B DT 4  N3 ? ? A DA 7  B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog17 hydrog ? ? A DA 7  N6 ? ? ? 1_555 B DT 4  O4 ? ? A DA 7  B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog18 hydrog ? ? A DC 8  N3 ? ? ? 1_555 B G  3  N1 ? ? A DC 8  B G  13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog19 hydrog ? ? A DC 8  N4 ? ? ? 1_555 B G  3  O6 ? ? A DC 8  B G  13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog20 hydrog ? ? A DC 8  O2 ? ? ? 1_555 B G  3  N2 ? ? A DC 8  B G  13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog21 hydrog ? ? A DG 9  N1 ? ? ? 1_555 B C  2  N3 ? ? A DG 9  B C  12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog22 hydrog ? ? A DG 9  N2 ? ? ? 1_555 B C  2  O2 ? ? A DG 9  B C  12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog23 hydrog ? ? A DG 9  O6 ? ? ? 1_555 B C  2  N4 ? ? A DG 9  B C  12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog24 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B G  1  N1 ? ? A DC 10 B G  11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog25 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B G  1  O6 ? ? A DC 10 B G  11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog26 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B G  1  N2 ? ? A DC 10 B G  11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
# 
_struct_conn_type.id          hydrog 
_struct_conn_type.criteria    ? 
_struct_conn_type.reference   ? 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 "O4'" A DG 1  ? ? "C1'" A DG 1  ? ? N9 A DG 1  ? ? 110.91 108.30 2.61 0.30 N 
2  1 "O4'" A DG 2  ? ? "C1'" A DG 2  ? ? N9 A DG 2  ? ? 113.17 108.30 4.87 0.30 N 
3  1 "O4'" A DG 3  ? ? "C1'" A DG 3  ? ? N9 A DG 3  ? ? 111.84 108.30 3.54 0.30 N 
4  1 "O4'" A DT 4  ? ? "C1'" A DT 4  ? ? N1 A DT 4  ? ? 112.75 108.30 4.45 0.30 N 
5  1 "O4'" A DA 5  ? ? "C1'" A DA 5  ? ? N9 A DA 5  ? ? 113.06 108.30 4.76 0.30 N 
6  1 "O4'" A DT 6  ? ? "C1'" A DT 6  ? ? N1 A DT 6  ? ? 111.93 108.30 3.63 0.30 N 
7  1 "O4'" A DA 7  ? ? "C1'" A DA 7  ? ? N9 A DA 7  ? ? 111.94 108.30 3.64 0.30 N 
8  1 "O4'" A DC 8  ? ? "C1'" A DC 8  ? ? N1 A DC 8  ? ? 112.39 108.30 4.09 0.30 N 
9  1 "O4'" A DG 9  ? ? "C1'" A DG 9  ? ? N9 A DG 9  ? ? 112.75 108.30 4.45 0.30 N 
10 1 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 113.53 108.30 5.23 0.30 N 
11 1 "O4'" B C  12 ? ? "C1'" B C  12 ? ? N1 B C  12 ? ? 113.33 108.50 4.83 0.70 N 
12 1 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 110.61 108.30 2.31 0.30 N 
13 1 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 111.14 108.30 2.84 0.30 N 
14 1 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 112.98 108.30 4.68 0.30 N 
15 1 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 114.58 108.30 6.28 0.30 N 
16 1 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.33 108.30 3.03 0.30 N 
17 1 "O4'" B DC 19 ? ? "C1'" B DC 19 ? ? N1 B DC 19 ? ? 112.35 108.30 4.05 0.30 N 
18 1 "O4'" B DC 20 ? ? "C1'" B DC 20 ? ? N1 B DC 20 ? ? 113.45 108.30 5.15 0.30 N 
# 
loop_
_pdbx_validate_planes.id 
_pdbx_validate_planes.PDB_model_num 
_pdbx_validate_planes.auth_comp_id 
_pdbx_validate_planes.auth_asym_id 
_pdbx_validate_planes.auth_seq_id 
_pdbx_validate_planes.PDB_ins_code 
_pdbx_validate_planes.label_alt_id 
_pdbx_validate_planes.rmsd 
_pdbx_validate_planes.type 
1 1 DA A 7  ? ? 0.067 'SIDE CHAIN' 
2 1 DG A 9  ? ? 0.078 'SIDE CHAIN' 
3 1 G  B 11 ? ? 0.069 'SIDE CHAIN' 
4 1 G  B 13 ? ? 0.082 'SIDE CHAIN' 
5 1 DT B 14 ? ? 0.068 'SIDE CHAIN' 
6 1 DA B 15 ? ? 0.070 'SIDE CHAIN' 
# 
_pdbx_nmr_ensemble.entry_id                                      169D 
_pdbx_nmr_ensemble.conformers_calculated_total_number            ? 
_pdbx_nmr_ensemble.conformers_submitted_total_number             1 
_pdbx_nmr_ensemble.conformer_selection_criteria                  ? 
_pdbx_nmr_ensemble.average_constraints_per_residue               ? 
_pdbx_nmr_ensemble.average_constraint_violations_per_residue     ? 
_pdbx_nmr_ensemble.maximum_distance_constraint_violation         ? 
_pdbx_nmr_ensemble.average_distance_constraint_violation         ? 
_pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation   ? 
_pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation   ? 
_pdbx_nmr_ensemble.distance_constraint_violation_method          ? 
_pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation    ? 
_pdbx_nmr_ensemble.average_torsion_angle_constraint_violation    ? 
_pdbx_nmr_ensemble.torsion_angle_constraint_violation_method     ? 
# 
_pdbx_nmr_refine.entry_id           169D 
_pdbx_nmr_refine.method             'MOLECULAR DYNAMICS, MATRIX RELAXATION' 
_pdbx_nmr_refine.details            
'FULL RELAXATION MATRIX SIMULATION OF THE TWO-DIMENSIONAL NUCLEAR OVERHAUSER EFFECT SPECTRA AT VARIOUS MIXING TIMES' 
_pdbx_nmr_refine.software_ordinal   1 
# 
_pdbx_nmr_software.name             Discover 
_pdbx_nmr_software.version          ? 
_pdbx_nmr_software.classification   refinement 
_pdbx_nmr_software.authors          'BIOSYM TECHNOLOGIES' 
_pdbx_nmr_software.ordinal          1 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
C  OP3    O N N 1   
C  P      P N N 2   
C  OP1    O N N 3   
C  OP2    O N N 4   
C  "O5'"  O N N 5   
C  "C5'"  C N N 6   
C  "C4'"  C N R 7   
C  "O4'"  O N N 8   
C  "C3'"  C N S 9   
C  "O3'"  O N N 10  
C  "C2'"  C N R 11  
C  "O2'"  O N N 12  
C  "C1'"  C N R 13  
C  N1     N N N 14  
C  C2     C N N 15  
C  O2     O N N 16  
C  N3     N N N 17  
C  C4     C N N 18  
C  N4     N N N 19  
C  C5     C N N 20  
C  C6     C N N 21  
C  HOP3   H N N 22  
C  HOP2   H N N 23  
C  "H5'"  H N N 24  
C  "H5''" H N N 25  
C  "H4'"  H N N 26  
C  "H3'"  H N N 27  
C  "HO3'" H N N 28  
C  "H2'"  H N N 29  
C  "HO2'" H N N 30  
C  "H1'"  H N N 31  
C  H41    H N N 32  
C  H42    H N N 33  
C  H5     H N N 34  
C  H6     H N N 35  
DA OP3    O N N 36  
DA P      P N N 37  
DA OP1    O N N 38  
DA OP2    O N N 39  
DA "O5'"  O N N 40  
DA "C5'"  C N N 41  
DA "C4'"  C N R 42  
DA "O4'"  O N N 43  
DA "C3'"  C N S 44  
DA "O3'"  O N N 45  
DA "C2'"  C N N 46  
DA "C1'"  C N R 47  
DA N9     N Y N 48  
DA C8     C Y N 49  
DA N7     N Y N 50  
DA C5     C Y N 51  
DA C6     C Y N 52  
DA N6     N N N 53  
DA N1     N Y N 54  
DA C2     C Y N 55  
DA N3     N Y N 56  
DA C4     C Y N 57  
DA HOP3   H N N 58  
DA HOP2   H N N 59  
DA "H5'"  H N N 60  
DA "H5''" H N N 61  
DA "H4'"  H N N 62  
DA "H3'"  H N N 63  
DA "HO3'" H N N 64  
DA "H2'"  H N N 65  
DA "H2''" H N N 66  
DA "H1'"  H N N 67  
DA H8     H N N 68  
DA H61    H N N 69  
DA H62    H N N 70  
DA H2     H N N 71  
DC OP3    O N N 72  
DC P      P N N 73  
DC OP1    O N N 74  
DC OP2    O N N 75  
DC "O5'"  O N N 76  
DC "C5'"  C N N 77  
DC "C4'"  C N R 78  
DC "O4'"  O N N 79  
DC "C3'"  C N S 80  
DC "O3'"  O N N 81  
DC "C2'"  C N N 82  
DC "C1'"  C N R 83  
DC N1     N N N 84  
DC C2     C N N 85  
DC O2     O N N 86  
DC N3     N N N 87  
DC C4     C N N 88  
DC N4     N N N 89  
DC C5     C N N 90  
DC C6     C N N 91  
DC HOP3   H N N 92  
DC HOP2   H N N 93  
DC "H5'"  H N N 94  
DC "H5''" H N N 95  
DC "H4'"  H N N 96  
DC "H3'"  H N N 97  
DC "HO3'" H N N 98  
DC "H2'"  H N N 99  
DC "H2''" H N N 100 
DC "H1'"  H N N 101 
DC H41    H N N 102 
DC H42    H N N 103 
DC H5     H N N 104 
DC H6     H N N 105 
DG OP3    O N N 106 
DG P      P N N 107 
DG OP1    O N N 108 
DG OP2    O N N 109 
DG "O5'"  O N N 110 
DG "C5'"  C N N 111 
DG "C4'"  C N R 112 
DG "O4'"  O N N 113 
DG "C3'"  C N S 114 
DG "O3'"  O N N 115 
DG "C2'"  C N N 116 
DG "C1'"  C N R 117 
DG N9     N Y N 118 
DG C8     C Y N 119 
DG N7     N Y N 120 
DG C5     C Y N 121 
DG C6     C N N 122 
DG O6     O N N 123 
DG N1     N N N 124 
DG C2     C N N 125 
DG N2     N N N 126 
DG N3     N N N 127 
DG C4     C Y N 128 
DG HOP3   H N N 129 
DG HOP2   H N N 130 
DG "H5'"  H N N 131 
DG "H5''" H N N 132 
DG "H4'"  H N N 133 
DG "H3'"  H N N 134 
DG "HO3'" H N N 135 
DG "H2'"  H N N 136 
DG "H2''" H N N 137 
DG "H1'"  H N N 138 
DG H8     H N N 139 
DG H1     H N N 140 
DG H21    H N N 141 
DG H22    H N N 142 
DT OP3    O N N 143 
DT P      P N N 144 
DT OP1    O N N 145 
DT OP2    O N N 146 
DT "O5'"  O N N 147 
DT "C5'"  C N N 148 
DT "C4'"  C N R 149 
DT "O4'"  O N N 150 
DT "C3'"  C N S 151 
DT "O3'"  O N N 152 
DT "C2'"  C N N 153 
DT "C1'"  C N R 154 
DT N1     N N N 155 
DT C2     C N N 156 
DT O2     O N N 157 
DT N3     N N N 158 
DT C4     C N N 159 
DT O4     O N N 160 
DT C5     C N N 161 
DT C7     C N N 162 
DT C6     C N N 163 
DT HOP3   H N N 164 
DT HOP2   H N N 165 
DT "H5'"  H N N 166 
DT "H5''" H N N 167 
DT "H4'"  H N N 168 
DT "H3'"  H N N 169 
DT "HO3'" H N N 170 
DT "H2'"  H N N 171 
DT "H2''" H N N 172 
DT "H1'"  H N N 173 
DT H3     H N N 174 
DT H71    H N N 175 
DT H72    H N N 176 
DT H73    H N N 177 
DT H6     H N N 178 
G  OP3    O N N 179 
G  P      P N N 180 
G  OP1    O N N 181 
G  OP2    O N N 182 
G  "O5'"  O N N 183 
G  "C5'"  C N N 184 
G  "C4'"  C N R 185 
G  "O4'"  O N N 186 
G  "C3'"  C N S 187 
G  "O3'"  O N N 188 
G  "C2'"  C N R 189 
G  "O2'"  O N N 190 
G  "C1'"  C N R 191 
G  N9     N Y N 192 
G  C8     C Y N 193 
G  N7     N Y N 194 
G  C5     C Y N 195 
G  C6     C N N 196 
G  O6     O N N 197 
G  N1     N N N 198 
G  C2     C N N 199 
G  N2     N N N 200 
G  N3     N N N 201 
G  C4     C Y N 202 
G  HOP3   H N N 203 
G  HOP2   H N N 204 
G  "H5'"  H N N 205 
G  "H5''" H N N 206 
G  "H4'"  H N N 207 
G  "H3'"  H N N 208 
G  "HO3'" H N N 209 
G  "H2'"  H N N 210 
G  "HO2'" H N N 211 
G  "H1'"  H N N 212 
G  H8     H N N 213 
G  H1     H N N 214 
G  H21    H N N 215 
G  H22    H N N 216 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
C  OP3   P      sing N N 1   
C  OP3   HOP3   sing N N 2   
C  P     OP1    doub N N 3   
C  P     OP2    sing N N 4   
C  P     "O5'"  sing N N 5   
C  OP2   HOP2   sing N N 6   
C  "O5'" "C5'"  sing N N 7   
C  "C5'" "C4'"  sing N N 8   
C  "C5'" "H5'"  sing N N 9   
C  "C5'" "H5''" sing N N 10  
C  "C4'" "O4'"  sing N N 11  
C  "C4'" "C3'"  sing N N 12  
C  "C4'" "H4'"  sing N N 13  
C  "O4'" "C1'"  sing N N 14  
C  "C3'" "O3'"  sing N N 15  
C  "C3'" "C2'"  sing N N 16  
C  "C3'" "H3'"  sing N N 17  
C  "O3'" "HO3'" sing N N 18  
C  "C2'" "O2'"  sing N N 19  
C  "C2'" "C1'"  sing N N 20  
C  "C2'" "H2'"  sing N N 21  
C  "O2'" "HO2'" sing N N 22  
C  "C1'" N1     sing N N 23  
C  "C1'" "H1'"  sing N N 24  
C  N1    C2     sing N N 25  
C  N1    C6     sing N N 26  
C  C2    O2     doub N N 27  
C  C2    N3     sing N N 28  
C  N3    C4     doub N N 29  
C  C4    N4     sing N N 30  
C  C4    C5     sing N N 31  
C  N4    H41    sing N N 32  
C  N4    H42    sing N N 33  
C  C5    C6     doub N N 34  
C  C5    H5     sing N N 35  
C  C6    H6     sing N N 36  
DA OP3   P      sing N N 37  
DA OP3   HOP3   sing N N 38  
DA P     OP1    doub N N 39  
DA P     OP2    sing N N 40  
DA P     "O5'"  sing N N 41  
DA OP2   HOP2   sing N N 42  
DA "O5'" "C5'"  sing N N 43  
DA "C5'" "C4'"  sing N N 44  
DA "C5'" "H5'"  sing N N 45  
DA "C5'" "H5''" sing N N 46  
DA "C4'" "O4'"  sing N N 47  
DA "C4'" "C3'"  sing N N 48  
DA "C4'" "H4'"  sing N N 49  
DA "O4'" "C1'"  sing N N 50  
DA "C3'" "O3'"  sing N N 51  
DA "C3'" "C2'"  sing N N 52  
DA "C3'" "H3'"  sing N N 53  
DA "O3'" "HO3'" sing N N 54  
DA "C2'" "C1'"  sing N N 55  
DA "C2'" "H2'"  sing N N 56  
DA "C2'" "H2''" sing N N 57  
DA "C1'" N9     sing N N 58  
DA "C1'" "H1'"  sing N N 59  
DA N9    C8     sing Y N 60  
DA N9    C4     sing Y N 61  
DA C8    N7     doub Y N 62  
DA C8    H8     sing N N 63  
DA N7    C5     sing Y N 64  
DA C5    C6     sing Y N 65  
DA C5    C4     doub Y N 66  
DA C6    N6     sing N N 67  
DA C6    N1     doub Y N 68  
DA N6    H61    sing N N 69  
DA N6    H62    sing N N 70  
DA N1    C2     sing Y N 71  
DA C2    N3     doub Y N 72  
DA C2    H2     sing N N 73  
DA N3    C4     sing Y N 74  
DC OP3   P      sing N N 75  
DC OP3   HOP3   sing N N 76  
DC P     OP1    doub N N 77  
DC P     OP2    sing N N 78  
DC P     "O5'"  sing N N 79  
DC OP2   HOP2   sing N N 80  
DC "O5'" "C5'"  sing N N 81  
DC "C5'" "C4'"  sing N N 82  
DC "C5'" "H5'"  sing N N 83  
DC "C5'" "H5''" sing N N 84  
DC "C4'" "O4'"  sing N N 85  
DC "C4'" "C3'"  sing N N 86  
DC "C4'" "H4'"  sing N N 87  
DC "O4'" "C1'"  sing N N 88  
DC "C3'" "O3'"  sing N N 89  
DC "C3'" "C2'"  sing N N 90  
DC "C3'" "H3'"  sing N N 91  
DC "O3'" "HO3'" sing N N 92  
DC "C2'" "C1'"  sing N N 93  
DC "C2'" "H2'"  sing N N 94  
DC "C2'" "H2''" sing N N 95  
DC "C1'" N1     sing N N 96  
DC "C1'" "H1'"  sing N N 97  
DC N1    C2     sing N N 98  
DC N1    C6     sing N N 99  
DC C2    O2     doub N N 100 
DC C2    N3     sing N N 101 
DC N3    C4     doub N N 102 
DC C4    N4     sing N N 103 
DC C4    C5     sing N N 104 
DC N4    H41    sing N N 105 
DC N4    H42    sing N N 106 
DC C5    C6     doub N N 107 
DC C5    H5     sing N N 108 
DC C6    H6     sing N N 109 
DG OP3   P      sing N N 110 
DG OP3   HOP3   sing N N 111 
DG P     OP1    doub N N 112 
DG P     OP2    sing N N 113 
DG P     "O5'"  sing N N 114 
DG OP2   HOP2   sing N N 115 
DG "O5'" "C5'"  sing N N 116 
DG "C5'" "C4'"  sing N N 117 
DG "C5'" "H5'"  sing N N 118 
DG "C5'" "H5''" sing N N 119 
DG "C4'" "O4'"  sing N N 120 
DG "C4'" "C3'"  sing N N 121 
DG "C4'" "H4'"  sing N N 122 
DG "O4'" "C1'"  sing N N 123 
DG "C3'" "O3'"  sing N N 124 
DG "C3'" "C2'"  sing N N 125 
DG "C3'" "H3'"  sing N N 126 
DG "O3'" "HO3'" sing N N 127 
DG "C2'" "C1'"  sing N N 128 
DG "C2'" "H2'"  sing N N 129 
DG "C2'" "H2''" sing N N 130 
DG "C1'" N9     sing N N 131 
DG "C1'" "H1'"  sing N N 132 
DG N9    C8     sing Y N 133 
DG N9    C4     sing Y N 134 
DG C8    N7     doub Y N 135 
DG C8    H8     sing N N 136 
DG N7    C5     sing Y N 137 
DG C5    C6     sing N N 138 
DG C5    C4     doub Y N 139 
DG C6    O6     doub N N 140 
DG C6    N1     sing N N 141 
DG N1    C2     sing N N 142 
DG N1    H1     sing N N 143 
DG C2    N2     sing N N 144 
DG C2    N3     doub N N 145 
DG N2    H21    sing N N 146 
DG N2    H22    sing N N 147 
DG N3    C4     sing N N 148 
DT OP3   P      sing N N 149 
DT OP3   HOP3   sing N N 150 
DT P     OP1    doub N N 151 
DT P     OP2    sing N N 152 
DT P     "O5'"  sing N N 153 
DT OP2   HOP2   sing N N 154 
DT "O5'" "C5'"  sing N N 155 
DT "C5'" "C4'"  sing N N 156 
DT "C5'" "H5'"  sing N N 157 
DT "C5'" "H5''" sing N N 158 
DT "C4'" "O4'"  sing N N 159 
DT "C4'" "C3'"  sing N N 160 
DT "C4'" "H4'"  sing N N 161 
DT "O4'" "C1'"  sing N N 162 
DT "C3'" "O3'"  sing N N 163 
DT "C3'" "C2'"  sing N N 164 
DT "C3'" "H3'"  sing N N 165 
DT "O3'" "HO3'" sing N N 166 
DT "C2'" "C1'"  sing N N 167 
DT "C2'" "H2'"  sing N N 168 
DT "C2'" "H2''" sing N N 169 
DT "C1'" N1     sing N N 170 
DT "C1'" "H1'"  sing N N 171 
DT N1    C2     sing N N 172 
DT N1    C6     sing N N 173 
DT C2    O2     doub N N 174 
DT C2    N3     sing N N 175 
DT N3    C4     sing N N 176 
DT N3    H3     sing N N 177 
DT C4    O4     doub N N 178 
DT C4    C5     sing N N 179 
DT C5    C7     sing N N 180 
DT C5    C6     doub N N 181 
DT C7    H71    sing N N 182 
DT C7    H72    sing N N 183 
DT C7    H73    sing N N 184 
DT C6    H6     sing N N 185 
G  OP3   P      sing N N 186 
G  OP3   HOP3   sing N N 187 
G  P     OP1    doub N N 188 
G  P     OP2    sing N N 189 
G  P     "O5'"  sing N N 190 
G  OP2   HOP2   sing N N 191 
G  "O5'" "C5'"  sing N N 192 
G  "C5'" "C4'"  sing N N 193 
G  "C5'" "H5'"  sing N N 194 
G  "C5'" "H5''" sing N N 195 
G  "C4'" "O4'"  sing N N 196 
G  "C4'" "C3'"  sing N N 197 
G  "C4'" "H4'"  sing N N 198 
G  "O4'" "C1'"  sing N N 199 
G  "C3'" "O3'"  sing N N 200 
G  "C3'" "C2'"  sing N N 201 
G  "C3'" "H3'"  sing N N 202 
G  "O3'" "HO3'" sing N N 203 
G  "C2'" "O2'"  sing N N 204 
G  "C2'" "C1'"  sing N N 205 
G  "C2'" "H2'"  sing N N 206 
G  "O2'" "HO2'" sing N N 207 
G  "C1'" N9     sing N N 208 
G  "C1'" "H1'"  sing N N 209 
G  N9    C8     sing Y N 210 
G  N9    C4     sing Y N 211 
G  C8    N7     doub Y N 212 
G  C8    H8     sing N N 213 
G  N7    C5     sing Y N 214 
G  C5    C6     sing N N 215 
G  C5    C4     doub Y N 216 
G  C6    O6     doub N N 217 
G  C6    N1     sing N N 218 
G  N1    C2     sing N N 219 
G  N1    H1     sing N N 220 
G  C2    N2     sing N N 221 
G  C2    N3     doub N N 222 
G  N2    H21    sing N N 223 
G  N2    H22    sing N N 224 
G  N3    C4     sing N N 225 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
169D 'double helix'        
169D 'b-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DG 1  1_555 B DC 10 1_555 0.306  -0.032 0.140  2.398   -2.745  -1.176 1  A_DG1:DC20_B A 1  ? B 20 ? 19 1 
1 A DG 2  1_555 B DC 9  1_555 -0.123 -0.075 -0.035 1.058   -6.274  -2.434 2  A_DG2:DC19_B A 2  ? B 19 ? 19 1 
1 A DG 3  1_555 B DC 8  1_555 -0.774 -0.191 -0.204 -7.257  -16.185 2.189  3  A_DG3:DC18_B A 3  ? B 18 ? 19 1 
1 A DT 4  1_555 B DA 7  1_555 0.269  -0.084 0.098  -8.539  -15.455 -4.478 4  A_DT4:DA17_B A 4  ? B 17 ? 20 1 
1 A DA 5  1_555 B DT 6  1_555 -0.184 -0.078 0.287  -8.927  -13.685 -4.031 5  A_DA5:DT16_B A 5  ? B 16 ? 20 1 
1 A DT 6  1_555 B DA 5  1_555 0.425  -0.176 0.580  -8.228  -13.737 -0.414 6  A_DT6:DA15_B A 6  ? B 15 ? 20 1 
1 A DA 7  1_555 B DT 4  1_555 -0.567 -0.185 0.754  12.659  -8.081  -0.742 7  A_DA7:DT14_B A 7  ? B 14 ? 20 1 
1 A DC 8  1_555 B G  3  1_555 0.870  -0.280 0.182  16.100  -21.289 -0.562 8  A_DC8:G13_B  A 8  ? B 13 ? 19 1 
1 A DG 9  1_555 B C  2  1_555 0.187  -0.078 0.288  -0.423  -22.668 -1.439 9  A_DG9:C12_B  A 9  ? B 12 ? 19 1 
1 A DC 10 1_555 B G  1  1_555 -0.087 -0.119 0.640  -10.500 -18.309 -7.062 10 A_DC10:G11_B A 10 ? B 11 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DG 1 1_555 B DC 10 1_555 A DG 2  1_555 B DC 9 1_555 -0.155 -1.816 3.109 1.800  4.294  27.172 -4.764 0.723  2.778 9.056  -3.796 
27.561 1 AA_DG1DG2:DC19DC20_BB A 1 ? B 20 ? A 2  ? B 19 ? 
1 A DG 2 1_555 B DC 9  1_555 A DG 3  1_555 B DC 8 1_555 -0.122 -1.681 3.252 0.521  7.122  31.147 -4.266 0.311  2.806 13.050 -0.955 
31.935 2 AA_DG2DG3:DC18DC19_BB A 2 ? B 19 ? A 3  ? B 18 ? 
1 A DG 3 1_555 B DC 8  1_555 A DT 4  1_555 B DA 7 1_555 0.067  -1.533 3.148 -0.031 2.734  37.964 -2.679 -0.106 3.035 4.196  0.047  
38.059 3 AA_DG3DT4:DA17DC18_BB A 3 ? B 18 ? A 4  ? B 17 ? 
1 A DT 4 1_555 B DA 7  1_555 A DA 5  1_555 B DT 6 1_555 -0.130 -1.584 2.897 0.007  13.611 27.958 -5.000 0.244  1.935 26.292 -0.013 
31.036 4 AA_DT4DA5:DT16DA17_BB A 4 ? B 17 ? A 5  ? B 16 ? 
1 A DA 5 1_555 B DT 6  1_555 A DT 6  1_555 B DA 5 1_555 -0.158 -1.317 3.117 -1.024 0.922  34.450 -2.358 0.117  3.085 1.556  1.727  
34.477 5 AA_DA5DT6:DA15DT16_BB A 5 ? B 16 ? A 6  ? B 15 ? 
1 A DT 6 1_555 B DA 5  1_555 A DA 7  1_555 B DT 4 1_555 0.063  -1.548 2.280 -3.436 6.807  29.858 -3.772 -0.551 1.871 12.946 6.535  
30.795 6 AA_DT6DA7:DT14DA15_BB A 6 ? B 15 ? A 7  ? B 14 ? 
1 A DA 7 1_555 B DT 4  1_555 A DC 8  1_555 B G  3 1_555 -0.163 -1.173 3.052 2.372  4.153  36.214 -2.395 0.559  2.888 6.646  -3.795 
36.518 7 AA_DA7DC8:G13DT14_BB  A 7 ? B 14 ? A 8  ? B 13 ? 
1 A DC 8 1_555 B G  3  1_555 A DG 9  1_555 B C  2 1_555 -0.146 -1.752 3.128 -1.307 17.750 29.800 -5.187 0.081  1.832 31.253 2.301  
34.607 8 AA_DC8DG9:C12G13_BB   A 8 ? B 13 ? A 9  ? B 12 ? 
1 A DG 9 1_555 B C  2  1_555 A DC 10 1_555 B G  1 1_555 -0.136 -1.826 3.202 -2.796 4.518  30.041 -4.317 -0.265 2.903 8.632  5.342  
30.497 9 AA_DG9DC10:G11C12_BB  A 9 ? B 12 ? A 10 ? B 11 ? 
# 
_atom_sites.entry_id                    169D 
_atom_sites.fract_transf_matrix[1][1]   1.000000 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   1.000000 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   1.000000 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
H 
N 
O 
P 
# 
loop_