data_178D
# 
_entry.id   178D 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.385 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   178D         pdb_0000178d 10.2210/pdb178d/pdb 
RCSB  BDLB56       ?            ?                   
WWPDB D_1000170173 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1994-10-04 
2 'Structure model' 1 1 2008-05-22 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2024-02-07 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Database references'       
5 4 'Structure model' 'Derived calculations'      
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' chem_comp_atom 
2 4 'Structure model' chem_comp_bond 
3 4 'Structure model' database_2     
4 4 'Structure model' struct_conn    
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 4 'Structure model' '_database_2.pdbx_DOI'                
2 4 'Structure model' '_database_2.pdbx_database_accession' 
3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        178D 
_pdbx_database_status.recvd_initial_deposition_date   1994-05-19 
_pdbx_database_status.deposit_site                    BNL 
_pdbx_database_status.process_site                    NDB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'McAuley-Hecht, K.E.' 1 
'Leonard, G.A.'       2 
'Gibson, N.J.'        3 
'Thomson, J.B.'       4 
'Watson, W.P.'        5 
'Hunter, W.N.'        6 
'Brown, T.'           7 
# 
_citation.id                        primary 
_citation.title                     'Crystal structure of a DNA duplex containing 8-hydroxydeoxyguanine-adenine base pairs.' 
_citation.journal_abbrev            Biochemistry 
_citation.journal_volume            33 
_citation.page_first                10266 
_citation.page_last                 10270 
_citation.year                      1994 
_citation.journal_id_ASTM           BICHAW 
_citation.country                   US 
_citation.journal_id_ISSN           0006-2960 
_citation.journal_id_CSD            0033 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   8068665 
_citation.pdbx_database_id_DOI      10.1021/bi00200a006 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'McAuley-Hecht, K.E.' 1 ? 
primary 'Leonard, G.A.'       2 ? 
primary 'Gibson, N.J.'        3 ? 
primary 'Thomson, J.B.'       4 ? 
primary 'Watson, W.P.'        5 ? 
primary 'Hunter, W.N.'        6 ? 
primary 'Brown, T.'           7 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer syn 
;DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*(8OG)P*GP*CP*G)-3')
;
3703.417 2  ? ? ? ? 
2 water   nat water                                                    18.015   72 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   yes 
_entity_poly.pdbx_seq_one_letter_code       '(DC)(DG)(DC)(DA)(DA)(DA)(DT)(DT)(8OG)(DG)(DC)(DG)' 
_entity_poly.pdbx_seq_one_letter_code_can   CGCAAATTGGCG 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
_pdbx_entity_nonpoly.entity_id   2 
_pdbx_entity_nonpoly.name        water 
_pdbx_entity_nonpoly.comp_id     HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DC  n 
1 2  DG  n 
1 3  DC  n 
1 4  DA  n 
1 5  DA  n 
1 6  DA  n 
1 7  DT  n 
1 8  DT  n 
1 9  8OG n 
1 10 DG  n 
1 11 DC  n 
1 12 DG  n 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 
'C10 H14 N5 O8 P' 363.221 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE"        ?                                                       
'C10 H14 N5 O6 P' 331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"         ?                                                       
'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE"        ?                                                       
'C10 H14 N5 O7 P' 347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"                ?                                                       
'C10 H15 N2 O8 P' 322.208 
HOH non-polymer   . WATER                                       ?                                                       'H2 O' 
18.015  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DC  1  1  1  DC  C  A . n 
A 1 2  DG  2  2  2  DG  G  A . n 
A 1 3  DC  3  3  3  DC  C  A . n 
A 1 4  DA  4  4  4  DA  A  A . n 
A 1 5  DA  5  5  5  DA  A  A . n 
A 1 6  DA  6  6  6  DA  A  A . n 
A 1 7  DT  7  7  7  DT  T  A . n 
A 1 8  DT  8  8  8  DT  T  A . n 
A 1 9  8OG 9  9  9  8OG +G A . n 
A 1 10 DG  10 10 10 DG  G  A . n 
A 1 11 DC  11 11 11 DC  C  A . n 
A 1 12 DG  12 12 12 DG  G  A . n 
B 1 1  DC  1  13 13 DC  C  B . n 
B 1 2  DG  2  14 14 DG  G  B . n 
B 1 3  DC  3  15 15 DC  C  B . n 
B 1 4  DA  4  16 16 DA  A  B . n 
B 1 5  DA  5  17 17 DA  A  B . n 
B 1 6  DA  6  18 18 DA  A  B . n 
B 1 7  DT  7  19 19 DT  T  B . n 
B 1 8  DT  8  20 20 DT  T  B . n 
B 1 9  8OG 9  21 21 8OG +G B . n 
B 1 10 DG  10 22 22 DG  G  B . n 
B 1 11 DC  11 23 23 DC  C  B . n 
B 1 12 DG  12 24 24 DG  G  B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 HOH 1  26 26 HOH HOH A . 
C 2 HOH 2  28 28 HOH HOH A . 
C 2 HOH 3  29 29 HOH HOH A . 
C 2 HOH 4  31 31 HOH HOH A . 
C 2 HOH 5  33 33 HOH HOH A . 
C 2 HOH 6  34 34 HOH HOH A . 
C 2 HOH 7  35 35 HOH HOH A . 
C 2 HOH 8  37 37 HOH HOH A . 
C 2 HOH 9  38 38 HOH HOH A . 
C 2 HOH 10 39 39 HOH HOH A . 
C 2 HOH 11 41 41 HOH HOH A . 
C 2 HOH 12 44 44 HOH HOH A . 
C 2 HOH 13 46 46 HOH HOH A . 
C 2 HOH 14 48 48 HOH HOH A . 
C 2 HOH 15 49 49 HOH HOH A . 
C 2 HOH 16 50 50 HOH HOH A . 
C 2 HOH 17 52 52 HOH HOH A . 
C 2 HOH 18 53 53 HOH HOH A . 
C 2 HOH 19 54 54 HOH HOH A . 
C 2 HOH 20 55 55 HOH HOH A . 
C 2 HOH 21 56 56 HOH HOH A . 
C 2 HOH 22 57 57 HOH HOH A . 
C 2 HOH 23 58 58 HOH HOH A . 
C 2 HOH 24 59 59 HOH HOH A . 
C 2 HOH 25 60 60 HOH HOH A . 
C 2 HOH 26 61 61 HOH HOH A . 
C 2 HOH 27 65 65 HOH HOH A . 
C 2 HOH 28 66 66 HOH HOH A . 
C 2 HOH 29 67 67 HOH HOH A . 
C 2 HOH 30 70 70 HOH HOH A . 
C 2 HOH 31 71 71 HOH HOH A . 
C 2 HOH 32 72 72 HOH HOH A . 
C 2 HOH 33 80 80 HOH HOH A . 
C 2 HOH 34 82 82 HOH HOH A . 
C 2 HOH 35 84 84 HOH HOH A . 
C 2 HOH 36 85 85 HOH HOH A . 
C 2 HOH 37 86 86 HOH HOH A . 
C 2 HOH 38 90 90 HOH HOH A . 
C 2 HOH 39 92 92 HOH HOH A . 
C 2 HOH 40 96 96 HOH HOH A . 
D 2 HOH 1  25 25 HOH HOH B . 
D 2 HOH 2  27 27 HOH HOH B . 
D 2 HOH 3  30 30 HOH HOH B . 
D 2 HOH 4  32 32 HOH HOH B . 
D 2 HOH 5  36 36 HOH HOH B . 
D 2 HOH 6  40 40 HOH HOH B . 
D 2 HOH 7  42 42 HOH HOH B . 
D 2 HOH 8  43 43 HOH HOH B . 
D 2 HOH 9  45 45 HOH HOH B . 
D 2 HOH 10 47 47 HOH HOH B . 
D 2 HOH 11 51 51 HOH HOH B . 
D 2 HOH 12 62 62 HOH HOH B . 
D 2 HOH 13 63 63 HOH HOH B . 
D 2 HOH 14 64 64 HOH HOH B . 
D 2 HOH 15 68 68 HOH HOH B . 
D 2 HOH 16 69 69 HOH HOH B . 
D 2 HOH 17 73 73 HOH HOH B . 
D 2 HOH 18 74 74 HOH HOH B . 
D 2 HOH 19 75 75 HOH HOH B . 
D 2 HOH 20 76 76 HOH HOH B . 
D 2 HOH 21 77 77 HOH HOH B . 
D 2 HOH 22 78 78 HOH HOH B . 
D 2 HOH 23 79 79 HOH HOH B . 
D 2 HOH 24 81 81 HOH HOH B . 
D 2 HOH 25 83 83 HOH HOH B . 
D 2 HOH 26 87 87 HOH HOH B . 
D 2 HOH 27 88 88 HOH HOH B . 
D 2 HOH 28 89 89 HOH HOH B . 
D 2 HOH 29 91 91 HOH HOH B . 
D 2 HOH 30 93 93 HOH HOH B . 
D 2 HOH 31 94 94 HOH HOH B . 
D 2 HOH 32 95 95 HOH HOH B . 
# 
_software.name             NUCLSQ 
_software.classification   refinement 
_software.version          . 
_software.citation_id      ? 
_software.pdbx_ordinal     1 
# 
_cell.entry_id           178D 
_cell.length_a           24.670 
_cell.length_b           40.490 
_cell.length_c           65.140 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              8 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         178D 
_symmetry.space_group_name_H-M             'P 21 21 21' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                19 
_symmetry.space_group_name_Hall            ? 
# 
_exptl.entry_id          178D 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   ? 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_percent_sol   43.99 
_exptl_crystal.density_Matthews      2.20 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, SITTING DROP' 
_exptl_crystal_grow.temp            277.00 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              6.50 
_exptl_crystal_grow.pdbx_details    'pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 277.00K' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 WATER           ? ? ? 
1 2 1 MPD             ? ? ? 
1 3 1 MGCL2           ? ? ? 
1 4 1 SPERMINE_HCL    ? ? ? 
1 5 1 'NA CACODYLATE' ? ? ? 
1 6 2 WATER           ? ? ? 
1 7 2 MPD             ? ? ? 
# 
_diffrn.id                     1 
_diffrn.crystal_id             1 
_diffrn.ambient_temp           ? 
_diffrn.ambient_temp_details   ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   ? 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             ? 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   . 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      'ROTATING ANODE' 
_diffrn_source.type                        'RIGAKU RU200' 
_diffrn_source.pdbx_synchrotron_site       ? 
_diffrn_source.pdbx_synchrotron_beamline   ? 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     178D 
_reflns.observed_criterion_sigma_I   1.000 
_reflns.observed_criterion_sigma_F   ? 
_reflns.d_resolution_low             ? 
_reflns.d_resolution_high            2.500 
_reflns.number_obs                   1965 
_reflns.number_all                   9923 
_reflns.percent_possible_obs         ? 
_reflns.pdbx_Rmerge_I_obs            ? 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              ? 
_reflns.R_free_details               ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_refine.entry_id                                 178D 
_refine.ls_number_reflns_obs                     1843 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          2.000 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             10.000 
_refine.ls_d_res_high                            2.500 
_refine.ls_percent_reflns_obs                    ? 
_refine.ls_R_factor_obs                          0.168 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       ? 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   490 
_refine_hist.pdbx_number_atoms_ligand         2 
_refine_hist.number_atoms_solvent             72 
_refine_hist.number_atoms_total               564 
_refine_hist.d_res_high                       2.500 
_refine_hist.d_res_low                        10.000 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
n_bond_d               ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_angle_d              ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_planar_d             ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_hb_or_metal_coord    ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_sugar_bond_it        2.445 2.445 ? ? 'X-RAY DIFFRACTION' ? 
n_sugar_angle_it       3.415 3.415 ? ? 'X-RAY DIFFRACTION' ? 
n_phos_bond_it         4.496 4.496 ? ? 'X-RAY DIFFRACTION' ? 
n_phos_angle_it        ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_bond_angle_restr     ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_dihedral_angle_restr ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_impr_tor             ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_sugar_bond_d         0.006 0.006 ? ? 'X-RAY DIFFRACTION' ? 
n_sugar_bond_angle_d   0.014 0.014 ? ? 'X-RAY DIFFRACTION' ? 
n_phos_bond_d          0.005 0.005 ? ? 'X-RAY DIFFRACTION' ? 
n_phos_bond_angle_d    0.010 0.010 ? ? 'X-RAY DIFFRACTION' ? 
n_plane_restr          0.005 0.005 ? ? 'X-RAY DIFFRACTION' ? 
n_chiral_restr         0.245 0.245 ? ? 'X-RAY DIFFRACTION' ? 
n_singtor_nbd          0.070 0.070 ? ? 'X-RAY DIFFRACTION' ? 
n_multtor_nbd          0.175 0.175 ? ? 'X-RAY DIFFRACTION' ? 
n_xhyhbond_nbd         ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
# 
_database_PDB_matrix.entry_id          178D 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  178D 
_struct.title                     'CRYSTAL STRUCTURE OF A DNA DUPLEX CONTAINING 8-HYDROXYDEOXYGUANINE.ADENINE BASE-PAIRS' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        178D 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'B-DNA, DOUBLE HELIX, MODIFIED, MISMATCHED, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 2 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    178D 
_struct_ref.pdbx_db_accession          178D 
_struct_ref.pdbx_align_begin           ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_db_isoform            ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 178D A 1 ? 12 ? 178D 1  ? 12 ? 1  12 
2 1 178D B 1 ? 12 ? 178D 13 ? 24 ? 13 24 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id        1 
_struct_biol.details   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A DT  8  "O3'" ? ? ? 1_555 A 8OG 9  P  ? ? A DT  8  A 8OG 9  1_555 ? ? ? ? ? ? ?                1.608 ? ? 
covale2  covale both ? A 8OG 9  "O3'" ? ? ? 1_555 A DG  10 P  ? ? A 8OG 9  A DG  10 1_555 ? ? ? ? ? ? ?                1.607 ? ? 
covale3  covale both ? B DT  8  "O3'" ? ? ? 1_555 B 8OG 9  P  ? ? B DT  20 B 8OG 21 1_555 ? ? ? ? ? ? ?                1.606 ? ? 
covale4  covale both ? B 8OG 9  "O3'" ? ? ? 1_555 B DG  10 P  ? ? B 8OG 21 B DG  22 1_555 ? ? ? ? ? ? ?                1.595 ? ? 
hydrog1  hydrog ?    ? A DC  1  N3    ? ? ? 1_555 B DG  12 N1 ? ? A DC  1  B DG  24 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog2  hydrog ?    ? A DC  1  N4    ? ? ? 1_555 B DG  12 O6 ? ? A DC  1  B DG  24 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog3  hydrog ?    ? A DC  1  O2    ? ? ? 1_555 B DG  12 N2 ? ? A DC  1  B DG  24 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog4  hydrog ?    ? A DG  2  N1    ? ? ? 1_555 B DC  11 N3 ? ? A DG  2  B DC  23 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog5  hydrog ?    ? A DG  2  N2    ? ? ? 1_555 B DC  11 O2 ? ? A DG  2  B DC  23 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog6  hydrog ?    ? A DG  2  O6    ? ? ? 1_555 B DC  11 N4 ? ? A DG  2  B DC  23 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog7  hydrog ?    ? A DC  3  N4    ? ? ? 1_555 B 8OG 9  O6 ? ? A DC  3  B 8OG 21 1_555 ? ? ? ? ? ? 'DC-8OG PAIR'    ?     ? ? 
hydrog8  hydrog ?    ? A DC  3  N3    ? ? ? 1_555 B DG  10 N1 ? ? A DC  3  B DG  22 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog9  hydrog ?    ? A DC  3  N4    ? ? ? 1_555 B DG  10 O6 ? ? A DC  3  B DG  22 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog10 hydrog ?    ? A DC  3  O2    ? ? ? 1_555 B DG  10 N2 ? ? A DC  3  B DG  22 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog11 hydrog ?    ? A DA  4  N6    ? ? ? 1_555 B 8OG 9  O6 ? ? A DA  4  B 8OG 21 1_555 ? ? ? ? ? ? 'DA-8OG MISPAIR' ?     ? ? 
hydrog12 hydrog ?    ? A DA  5  N1    ? ? ? 1_555 B DT  8  N3 ? ? A DA  5  B DT  20 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog13 hydrog ?    ? A DA  5  N6    ? ? ? 1_555 B DT  8  O4 ? ? A DA  5  B DT  20 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog14 hydrog ?    ? A DA  6  N1    ? ? ? 1_555 B DT  7  N3 ? ? A DA  6  B DT  19 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog15 hydrog ?    ? A DA  6  N6    ? ? ? 1_555 B DT  7  O4 ? ? A DA  6  B DT  19 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog16 hydrog ?    ? A DT  7  N3    ? ? ? 1_555 B DA  6  N1 ? ? A DT  7  B DA  18 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog17 hydrog ?    ? A DT  7  O4    ? ? ? 1_555 B DA  6  N6 ? ? A DT  7  B DA  18 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog18 hydrog ?    ? A DT  8  N3    ? ? ? 1_555 B DA  5  N1 ? ? A DT  8  B DA  17 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog19 hydrog ?    ? A DT  8  O4    ? ? ? 1_555 B DA  5  N6 ? ? A DT  8  B DA  17 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog20 hydrog ?    ? A 8OG 9  O6    ? ? ? 1_555 B DA  4  N6 ? ? A 8OG 9  B DA  16 1_555 ? ? ? ? ? ? '8OG-DA MISPAIR' ?     ? ? 
hydrog21 hydrog ?    ? A DG  10 N1    ? ? ? 1_555 B DC  3  N3 ? ? A DG  10 B DC  15 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog22 hydrog ?    ? A DG  10 N2    ? ? ? 1_555 B DC  3  O2 ? ? A DG  10 B DC  15 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog23 hydrog ?    ? A DG  10 O6    ? ? ? 1_555 B DC  3  N4 ? ? A DG  10 B DC  15 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog24 hydrog ?    ? A DC  11 N3    ? ? ? 1_555 B DG  2  N1 ? ? A DC  11 B DG  14 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog25 hydrog ?    ? A DC  11 N4    ? ? ? 1_555 B DG  2  O6 ? ? A DC  11 B DG  14 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog26 hydrog ?    ? A DC  11 O2    ? ? ? 1_555 B DG  2  N2 ? ? A DC  11 B DG  14 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog27 hydrog ?    ? A DG  12 N1    ? ? ? 1_555 B DC  1  N3 ? ? A DG  12 B DC  13 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog28 hydrog ?    ? A DG  12 N2    ? ? ? 1_555 B DC  1  O2 ? ? A DG  12 B DC  13 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
hydrog29 hydrog ?    ? A DG  12 O6    ? ? ? 1_555 B DC  1  N4 ? ? A DG  12 B DC  13 1_555 ? ? ? ? ? ? WATSON-CRICK     ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
hydrog ? ? 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 "C3'" A DC 1  ? ? "C2'" A DC 1  ? ? "C1'" A DC 1  ? ? 96.97  102.40 -5.43 0.80 N 
2  1 "O4'" A DC 1  ? ? "C1'" A DC 1  ? ? N1    A DC 1  ? ? 111.24 108.30 2.94  0.30 N 
3  1 "O4'" A DG 2  ? ? "C1'" A DG 2  ? ? N9    A DG 2  ? ? 110.94 108.30 2.64  0.30 N 
4  1 C5    A DG 2  ? ? C6    A DG 2  ? ? N1    A DG 2  ? ? 114.70 111.50 3.20  0.50 N 
5  1 "O4'" A DC 3  ? ? "C1'" A DC 3  ? ? N1    A DC 3  ? ? 110.21 108.30 1.91  0.30 N 
6  1 N1    A DA 4  ? ? C2    A DA 4  ? ? N3    A DA 4  ? ? 126.25 129.30 -3.05 0.50 N 
7  1 "O4'" A DA 5  ? ? "C1'" A DA 5  ? ? N9    A DA 5  ? ? 110.49 108.30 2.19  0.30 N 
8  1 N1    A DA 5  ? ? C2    A DA 5  ? ? N3    A DA 5  ? ? 126.19 129.30 -3.11 0.50 N 
9  1 N1    A DA 6  ? ? C2    A DA 6  ? ? N3    A DA 6  ? ? 125.88 129.30 -3.42 0.50 N 
10 1 C2    A DT 7  ? ? N3    A DT 7  ? ? C4    A DT 7  ? ? 123.01 127.20 -4.19 0.60 N 
11 1 "O4'" A DT 8  ? ? "C1'" A DT 8  ? ? N1    A DT 8  ? ? 112.09 108.30 3.79  0.30 N 
12 1 C2    A DT 8  ? ? N3    A DT 8  ? ? C4    A DT 8  ? ? 122.75 127.20 -4.45 0.60 N 
13 1 N3    A DT 8  ? ? C4    A DT 8  ? ? C5    A DT 8  ? ? 118.90 115.20 3.70  0.60 N 
14 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9    A DG 10 ? ? 117.27 108.30 8.97  0.30 N 
15 1 C5    A DG 10 ? ? C6    A DG 10 ? ? N1    A DG 10 ? ? 114.63 111.50 3.13  0.50 N 
16 1 C5    A DG 12 ? ? C6    A DG 12 ? ? N1    A DG 12 ? ? 114.93 111.50 3.43  0.50 N 
17 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9    B DG 14 ? ? 110.42 108.30 2.12  0.30 N 
18 1 C5    B DG 14 ? ? C6    B DG 14 ? ? N1    B DG 14 ? ? 114.52 111.50 3.02  0.50 N 
19 1 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1    B DC 15 ? ? 110.78 108.30 2.48  0.30 N 
20 1 "O4'" B DA 16 ? ? "C1'" B DA 16 ? ? N9    B DA 16 ? ? 110.17 108.30 1.87  0.30 N 
21 1 N1    B DA 16 ? ? C2    B DA 16 ? ? N3    B DA 16 ? ? 126.29 129.30 -3.01 0.50 N 
22 1 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9    B DA 17 ? ? 110.19 108.30 1.89  0.30 N 
23 1 N1    B DA 17 ? ? C2    B DA 17 ? ? N3    B DA 17 ? ? 126.12 129.30 -3.18 0.50 N 
24 1 "O4'" B DA 18 ? ? "C1'" B DA 18 ? ? N9    B DA 18 ? ? 111.34 108.30 3.04  0.30 N 
25 1 C6    B DA 18 ? ? N1    B DA 18 ? ? C2    B DA 18 ? ? 122.57 118.60 3.97  0.60 N 
26 1 N1    B DA 18 ? ? C2    B DA 18 ? ? N3    B DA 18 ? ? 125.80 129.30 -3.50 0.50 N 
27 1 C5    B DA 18 ? ? C6    B DA 18 ? ? N1    B DA 18 ? ? 114.53 117.70 -3.17 0.50 N 
28 1 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1    B DT 19 ? ? 111.15 108.30 2.85  0.30 N 
29 1 C2    B DT 19 ? ? N3    B DT 19 ? ? C4    B DT 19 ? ? 122.92 127.20 -4.28 0.60 N 
30 1 C2    B DT 20 ? ? N3    B DT 20 ? ? C4    B DT 20 ? ? 122.62 127.20 -4.58 0.60 N 
31 1 N3    B DT 20 ? ? C4    B DT 20 ? ? C5    B DT 20 ? ? 119.06 115.20 3.86  0.60 N 
32 1 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9    B DG 22 ? ? 111.70 108.30 3.40  0.30 N 
33 1 C5    B DG 22 ? ? C6    B DG 22 ? ? N1    B DG 22 ? ? 114.61 111.50 3.11  0.50 N 
34 1 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? N1    B DC 23 ? ? 111.19 108.30 2.89  0.30 N 
35 1 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9    B DG 24 ? ? 111.19 108.30 2.89  0.30 N 
36 1 C5    B DG 24 ? ? C6    B DG 24 ? ? N1    B DG 24 ? ? 114.57 111.50 3.07  0.50 N 
# 
loop_
_pdbx_struct_mod_residue.id 
_pdbx_struct_mod_residue.label_asym_id 
_pdbx_struct_mod_residue.label_comp_id 
_pdbx_struct_mod_residue.label_seq_id 
_pdbx_struct_mod_residue.auth_asym_id 
_pdbx_struct_mod_residue.auth_comp_id 
_pdbx_struct_mod_residue.auth_seq_id 
_pdbx_struct_mod_residue.PDB_ins_code 
_pdbx_struct_mod_residue.parent_comp_id 
_pdbx_struct_mod_residue.details 
1 A 8OG 9 A 8OG 9  ? DG ? 
2 B 8OG 9 B 8OG 21 ? DG ? 
# 
loop_
_refine_B_iso.class 
_refine_B_iso.details 
_refine_B_iso.treatment 
_refine_B_iso.pdbx_refine_id 
'ALL ATOMS'  TR isotropic 'X-RAY DIFFRACTION' 
'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' 
# 
loop_
_refine_occupancy.class 
_refine_occupancy.treatment 
_refine_occupancy.pdbx_refine_id 
'ALL ATOMS'  fix 'X-RAY DIFFRACTION' 
'ALL WATERS' fix 'X-RAY DIFFRACTION' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
8OG OP3    O N N 1   
8OG P      P N N 2   
8OG OP1    O N N 3   
8OG OP2    O N N 4   
8OG "O5'"  O N N 5   
8OG "C5'"  C N N 6   
8OG "C4'"  C N R 7   
8OG "O4'"  O N N 8   
8OG "C3'"  C N S 9   
8OG "O3'"  O N N 10  
8OG "C2'"  C N N 11  
8OG "C1'"  C N R 12  
8OG N9     N N N 13  
8OG C8     C N N 14  
8OG N7     N N N 15  
8OG C5     C N N 16  
8OG C6     C N N 17  
8OG O6     O N N 18  
8OG N1     N N N 19  
8OG C2     C N N 20  
8OG N2     N N N 21  
8OG N3     N N N 22  
8OG C4     C N N 23  
8OG O8     O N N 24  
8OG HOP3   H N N 25  
8OG HOP2   H N N 26  
8OG "H5'"  H N N 27  
8OG "H5''" H N N 28  
8OG "H4'"  H N N 29  
8OG "H3'"  H N N 30  
8OG "HO3'" H N N 31  
8OG "H2'"  H N N 32  
8OG "H2''" H N N 33  
8OG "H1'"  H N N 34  
8OG H7     H N N 35  
8OG H1     H N N 36  
8OG H21    H N N 37  
8OG H22    H N N 38  
DA  OP3    O N N 39  
DA  P      P N N 40  
DA  OP1    O N N 41  
DA  OP2    O N N 42  
DA  "O5'"  O N N 43  
DA  "C5'"  C N N 44  
DA  "C4'"  C N R 45  
DA  "O4'"  O N N 46  
DA  "C3'"  C N S 47  
DA  "O3'"  O N N 48  
DA  "C2'"  C N N 49  
DA  "C1'"  C N R 50  
DA  N9     N Y N 51  
DA  C8     C Y N 52  
DA  N7     N Y N 53  
DA  C5     C Y N 54  
DA  C6     C Y N 55  
DA  N6     N N N 56  
DA  N1     N Y N 57  
DA  C2     C Y N 58  
DA  N3     N Y N 59  
DA  C4     C Y N 60  
DA  HOP3   H N N 61  
DA  HOP2   H N N 62  
DA  "H5'"  H N N 63  
DA  "H5''" H N N 64  
DA  "H4'"  H N N 65  
DA  "H3'"  H N N 66  
DA  "HO3'" H N N 67  
DA  "H2'"  H N N 68  
DA  "H2''" H N N 69  
DA  "H1'"  H N N 70  
DA  H8     H N N 71  
DA  H61    H N N 72  
DA  H62    H N N 73  
DA  H2     H N N 74  
DC  OP3    O N N 75  
DC  P      P N N 76  
DC  OP1    O N N 77  
DC  OP2    O N N 78  
DC  "O5'"  O N N 79  
DC  "C5'"  C N N 80  
DC  "C4'"  C N R 81  
DC  "O4'"  O N N 82  
DC  "C3'"  C N S 83  
DC  "O3'"  O N N 84  
DC  "C2'"  C N N 85  
DC  "C1'"  C N R 86  
DC  N1     N N N 87  
DC  C2     C N N 88  
DC  O2     O N N 89  
DC  N3     N N N 90  
DC  C4     C N N 91  
DC  N4     N N N 92  
DC  C5     C N N 93  
DC  C6     C N N 94  
DC  HOP3   H N N 95  
DC  HOP2   H N N 96  
DC  "H5'"  H N N 97  
DC  "H5''" H N N 98  
DC  "H4'"  H N N 99  
DC  "H3'"  H N N 100 
DC  "HO3'" H N N 101 
DC  "H2'"  H N N 102 
DC  "H2''" H N N 103 
DC  "H1'"  H N N 104 
DC  H41    H N N 105 
DC  H42    H N N 106 
DC  H5     H N N 107 
DC  H6     H N N 108 
DG  OP3    O N N 109 
DG  P      P N N 110 
DG  OP1    O N N 111 
DG  OP2    O N N 112 
DG  "O5'"  O N N 113 
DG  "C5'"  C N N 114 
DG  "C4'"  C N R 115 
DG  "O4'"  O N N 116 
DG  "C3'"  C N S 117 
DG  "O3'"  O N N 118 
DG  "C2'"  C N N 119 
DG  "C1'"  C N R 120 
DG  N9     N Y N 121 
DG  C8     C Y N 122 
DG  N7     N Y N 123 
DG  C5     C Y N 124 
DG  C6     C N N 125 
DG  O6     O N N 126 
DG  N1     N N N 127 
DG  C2     C N N 128 
DG  N2     N N N 129 
DG  N3     N N N 130 
DG  C4     C Y N 131 
DG  HOP3   H N N 132 
DG  HOP2   H N N 133 
DG  "H5'"  H N N 134 
DG  "H5''" H N N 135 
DG  "H4'"  H N N 136 
DG  "H3'"  H N N 137 
DG  "HO3'" H N N 138 
DG  "H2'"  H N N 139 
DG  "H2''" H N N 140 
DG  "H1'"  H N N 141 
DG  H8     H N N 142 
DG  H1     H N N 143 
DG  H21    H N N 144 
DG  H22    H N N 145 
DT  OP3    O N N 146 
DT  P      P N N 147 
DT  OP1    O N N 148 
DT  OP2    O N N 149 
DT  "O5'"  O N N 150 
DT  "C5'"  C N N 151 
DT  "C4'"  C N R 152 
DT  "O4'"  O N N 153 
DT  "C3'"  C N S 154 
DT  "O3'"  O N N 155 
DT  "C2'"  C N N 156 
DT  "C1'"  C N R 157 
DT  N1     N N N 158 
DT  C2     C N N 159 
DT  O2     O N N 160 
DT  N3     N N N 161 
DT  C4     C N N 162 
DT  O4     O N N 163 
DT  C5     C N N 164 
DT  C7     C N N 165 
DT  C6     C N N 166 
DT  HOP3   H N N 167 
DT  HOP2   H N N 168 
DT  "H5'"  H N N 169 
DT  "H5''" H N N 170 
DT  "H4'"  H N N 171 
DT  "H3'"  H N N 172 
DT  "HO3'" H N N 173 
DT  "H2'"  H N N 174 
DT  "H2''" H N N 175 
DT  "H1'"  H N N 176 
DT  H3     H N N 177 
DT  H71    H N N 178 
DT  H72    H N N 179 
DT  H73    H N N 180 
DT  H6     H N N 181 
HOH O      O N N 182 
HOH H1     H N N 183 
HOH H2     H N N 184 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8OG OP3   P      sing N N 1   
8OG OP3   HOP3   sing N N 2   
8OG P     OP1    doub N N 3   
8OG P     OP2    sing N N 4   
8OG P     "O5'"  sing N N 5   
8OG OP2   HOP2   sing N N 6   
8OG "O5'" "C5'"  sing N N 7   
8OG "C5'" "C4'"  sing N N 8   
8OG "C5'" "H5'"  sing N N 9   
8OG "C5'" "H5''" sing N N 10  
8OG "C4'" "O4'"  sing N N 11  
8OG "C4'" "C3'"  sing N N 12  
8OG "C4'" "H4'"  sing N N 13  
8OG "O4'" "C1'"  sing N N 14  
8OG "C3'" "O3'"  sing N N 15  
8OG "C3'" "C2'"  sing N N 16  
8OG "C3'" "H3'"  sing N N 17  
8OG "O3'" "HO3'" sing N N 18  
8OG "C2'" "C1'"  sing N N 19  
8OG "C2'" "H2'"  sing N N 20  
8OG "C2'" "H2''" sing N N 21  
8OG "C1'" N9     sing N N 22  
8OG "C1'" "H1'"  sing N N 23  
8OG N9    C8     sing N N 24  
8OG N9    C4     sing N N 25  
8OG C8    N7     sing N N 26  
8OG C8    O8     doub N N 27  
8OG N7    C5     sing N N 28  
8OG N7    H7     sing N N 29  
8OG C5    C6     sing N N 30  
8OG C5    C4     doub N N 31  
8OG C6    O6     doub N N 32  
8OG C6    N1     sing N N 33  
8OG N1    C2     sing N N 34  
8OG N1    H1     sing N N 35  
8OG C2    N2     sing N N 36  
8OG C2    N3     doub N N 37  
8OG N2    H21    sing N N 38  
8OG N2    H22    sing N N 39  
8OG N3    C4     sing N N 40  
DA  OP3   P      sing N N 41  
DA  OP3   HOP3   sing N N 42  
DA  P     OP1    doub N N 43  
DA  P     OP2    sing N N 44  
DA  P     "O5'"  sing N N 45  
DA  OP2   HOP2   sing N N 46  
DA  "O5'" "C5'"  sing N N 47  
DA  "C5'" "C4'"  sing N N 48  
DA  "C5'" "H5'"  sing N N 49  
DA  "C5'" "H5''" sing N N 50  
DA  "C4'" "O4'"  sing N N 51  
DA  "C4'" "C3'"  sing N N 52  
DA  "C4'" "H4'"  sing N N 53  
DA  "O4'" "C1'"  sing N N 54  
DA  "C3'" "O3'"  sing N N 55  
DA  "C3'" "C2'"  sing N N 56  
DA  "C3'" "H3'"  sing N N 57  
DA  "O3'" "HO3'" sing N N 58  
DA  "C2'" "C1'"  sing N N 59  
DA  "C2'" "H2'"  sing N N 60  
DA  "C2'" "H2''" sing N N 61  
DA  "C1'" N9     sing N N 62  
DA  "C1'" "H1'"  sing N N 63  
DA  N9    C8     sing Y N 64  
DA  N9    C4     sing Y N 65  
DA  C8    N7     doub Y N 66  
DA  C8    H8     sing N N 67  
DA  N7    C5     sing Y N 68  
DA  C5    C6     sing Y N 69  
DA  C5    C4     doub Y N 70  
DA  C6    N6     sing N N 71  
DA  C6    N1     doub Y N 72  
DA  N6    H61    sing N N 73  
DA  N6    H62    sing N N 74  
DA  N1    C2     sing Y N 75  
DA  C2    N3     doub Y N 76  
DA  C2    H2     sing N N 77  
DA  N3    C4     sing Y N 78  
DC  OP3   P      sing N N 79  
DC  OP3   HOP3   sing N N 80  
DC  P     OP1    doub N N 81  
DC  P     OP2    sing N N 82  
DC  P     "O5'"  sing N N 83  
DC  OP2   HOP2   sing N N 84  
DC  "O5'" "C5'"  sing N N 85  
DC  "C5'" "C4'"  sing N N 86  
DC  "C5'" "H5'"  sing N N 87  
DC  "C5'" "H5''" sing N N 88  
DC  "C4'" "O4'"  sing N N 89  
DC  "C4'" "C3'"  sing N N 90  
DC  "C4'" "H4'"  sing N N 91  
DC  "O4'" "C1'"  sing N N 92  
DC  "C3'" "O3'"  sing N N 93  
DC  "C3'" "C2'"  sing N N 94  
DC  "C3'" "H3'"  sing N N 95  
DC  "O3'" "HO3'" sing N N 96  
DC  "C2'" "C1'"  sing N N 97  
DC  "C2'" "H2'"  sing N N 98  
DC  "C2'" "H2''" sing N N 99  
DC  "C1'" N1     sing N N 100 
DC  "C1'" "H1'"  sing N N 101 
DC  N1    C2     sing N N 102 
DC  N1    C6     sing N N 103 
DC  C2    O2     doub N N 104 
DC  C2    N3     sing N N 105 
DC  N3    C4     doub N N 106 
DC  C4    N4     sing N N 107 
DC  C4    C5     sing N N 108 
DC  N4    H41    sing N N 109 
DC  N4    H42    sing N N 110 
DC  C5    C6     doub N N 111 
DC  C5    H5     sing N N 112 
DC  C6    H6     sing N N 113 
DG  OP3   P      sing N N 114 
DG  OP3   HOP3   sing N N 115 
DG  P     OP1    doub N N 116 
DG  P     OP2    sing N N 117 
DG  P     "O5'"  sing N N 118 
DG  OP2   HOP2   sing N N 119 
DG  "O5'" "C5'"  sing N N 120 
DG  "C5'" "C4'"  sing N N 121 
DG  "C5'" "H5'"  sing N N 122 
DG  "C5'" "H5''" sing N N 123 
DG  "C4'" "O4'"  sing N N 124 
DG  "C4'" "C3'"  sing N N 125 
DG  "C4'" "H4'"  sing N N 126 
DG  "O4'" "C1'"  sing N N 127 
DG  "C3'" "O3'"  sing N N 128 
DG  "C3'" "C2'"  sing N N 129 
DG  "C3'" "H3'"  sing N N 130 
DG  "O3'" "HO3'" sing N N 131 
DG  "C2'" "C1'"  sing N N 132 
DG  "C2'" "H2'"  sing N N 133 
DG  "C2'" "H2''" sing N N 134 
DG  "C1'" N9     sing N N 135 
DG  "C1'" "H1'"  sing N N 136 
DG  N9    C8     sing Y N 137 
DG  N9    C4     sing Y N 138 
DG  C8    N7     doub Y N 139 
DG  C8    H8     sing N N 140 
DG  N7    C5     sing Y N 141 
DG  C5    C6     sing N N 142 
DG  C5    C4     doub Y N 143 
DG  C6    O6     doub N N 144 
DG  C6    N1     sing N N 145 
DG  N1    C2     sing N N 146 
DG  N1    H1     sing N N 147 
DG  C2    N2     sing N N 148 
DG  C2    N3     doub N N 149 
DG  N2    H21    sing N N 150 
DG  N2    H22    sing N N 151 
DG  N3    C4     sing N N 152 
DT  OP3   P      sing N N 153 
DT  OP3   HOP3   sing N N 154 
DT  P     OP1    doub N N 155 
DT  P     OP2    sing N N 156 
DT  P     "O5'"  sing N N 157 
DT  OP2   HOP2   sing N N 158 
DT  "O5'" "C5'"  sing N N 159 
DT  "C5'" "C4'"  sing N N 160 
DT  "C5'" "H5'"  sing N N 161 
DT  "C5'" "H5''" sing N N 162 
DT  "C4'" "O4'"  sing N N 163 
DT  "C4'" "C3'"  sing N N 164 
DT  "C4'" "H4'"  sing N N 165 
DT  "O4'" "C1'"  sing N N 166 
DT  "C3'" "O3'"  sing N N 167 
DT  "C3'" "C2'"  sing N N 168 
DT  "C3'" "H3'"  sing N N 169 
DT  "O3'" "HO3'" sing N N 170 
DT  "C2'" "C1'"  sing N N 171 
DT  "C2'" "H2'"  sing N N 172 
DT  "C2'" "H2''" sing N N 173 
DT  "C1'" N1     sing N N 174 
DT  "C1'" "H1'"  sing N N 175 
DT  N1    C2     sing N N 176 
DT  N1    C6     sing N N 177 
DT  C2    O2     doub N N 178 
DT  C2    N3     sing N N 179 
DT  N3    C4     sing N N 180 
DT  N3    H3     sing N N 181 
DT  C4    O4     doub N N 182 
DT  C4    C5     sing N N 183 
DT  C5    C7     sing N N 184 
DT  C5    C6     doub N N 185 
DT  C7    H71    sing N N 186 
DT  C7    H72    sing N N 187 
DT  C7    H73    sing N N 188 
DT  C6    H6     sing N N 189 
HOH O     H1     sing N N 190 
HOH O     H2     sing N N 191 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
178D 'double helix'         
178D 'b-form double helix'  
178D 'mismatched base pair' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DC  1  1_555 B DG  12 1_555 0.214  -0.325 -0.266 7.263   -14.618 0.167   1  A_DC1:DG24_B  A 1  ? B 24 ? 19 1 
1 A DG  2  1_555 B DC  11 1_555 -0.263 -0.434 0.228  -0.100  -11.207 -4.706  2  A_DG2:DC23_B  A 2  ? B 23 ? 19 1 
1 A DC  3  1_555 B DG  10 1_555 -0.166 -0.317 -0.038 -5.986  -7.394  1.206   3  A_DC3:DG22_B  A 3  ? B 22 ? 19 1 
1 A DA  4  1_555 B 8OG 9  1_555 -0.766 5.111  -0.026 -0.315  -20.468 -84.342 4  A_DA4:8OG21_B A 4  ? B 21 ? ?  ? 
1 A DA  5  1_555 B DT  8  1_555 -0.040 -0.379 -0.071 5.848   -22.838 -1.233  5  A_DA5:DT20_B  A 5  ? B 20 ? 20 1 
1 A DA  6  1_555 B DT  7  1_555 0.487  -0.457 0.336  5.174   -21.972 -4.569  6  A_DA6:DT19_B  A 6  ? B 19 ? 20 1 
1 A DT  7  1_555 B DA  6  1_555 -0.080 -0.455 0.060  -0.698  -18.903 2.495   7  A_DT7:DA18_B  A 7  ? B 18 ? 20 1 
1 A DT  8  1_555 B DA  5  1_555 -0.038 -0.520 0.499  -12.150 -26.157 -8.050  8  A_DT8:DA17_B  A 8  ? B 17 ? 20 1 
1 A 8OG 9  1_555 B DA  4  1_555 0.086  -4.428 -0.188 2.612   18.588  83.556  9  A_8OG9:DA16_B A 9  ? B 16 ? ?  ? 
1 A DG  10 1_555 B DC  3  1_555 0.808  -0.445 0.375  4.448   -7.470  -2.601  10 A_DG10:DC15_B A 10 ? B 15 ? 19 1 
1 A DC  11 1_555 B DG  2  1_555 -0.080 -0.454 0.469  -6.403  -18.765 -7.426  11 A_DC11:DG14_B A 11 ? B 14 ? 19 1 
1 A DG  12 1_555 B DC  1  1_555 0.061  -0.294 0.278  1.997   5.237   0.506   12 A_DG12:DC13_B A 12 ? B 13 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DC  1  1_555 B DG  12 1_555 A DG  2  1_555 B DC  11 1_555 -0.503 0.252  3.623  -2.731   5.957    37.947  -0.445  0.383  3.646  
9.078   4.161   38.488   1  AA_DC1DG2:DC23DG24_BB   A 1  ? B 24 ? A 2  ? B 23 ? 
1 A DG  2  1_555 B DC  11 1_555 A DC  3  1_555 B DG  10 1_555 0.903  0.245  3.587  4.085    -5.097   36.322  1.151   -0.814 3.598  
-8.095  -6.488  36.885   2  AA_DG2DC3:DG22DC23_BB   A 2  ? B 23 ? A 3  ? B 22 ? 
1 A DC  3  1_555 B DG  10 1_555 A DA  4  1_555 B 8OG 9  1_555 0.857  -1.305 2.761  3.638    9.078    66.554  -1.471  -0.657 2.623  
8.226   -3.297  67.187   3  AA_DC3DA4:8OG21DG22_BB  A 3  ? B 22 ? A 4  ? B 21 ? 
1 A DA  4  1_555 B 8OG 9  1_555 A DA  5  1_555 B DT  8  1_555 0.181  2.341  3.505  0.277    3.369    -0.177  -61.150 4.832  -2.162 
-86.714 7.122   -3.385   4  AA_DA4DA5:DT208OG21_BB  A 4  ? B 21 ? A 5  ? B 20 ? 
1 A DA  5  1_555 B DT  8  1_555 A DA  6  1_555 B DT  7  1_555 -0.046 -0.342 3.098  -3.509   2.364    41.338  -0.719  -0.287 3.068  
3.338   4.955   41.545   5  AA_DA5DA6:DT19DT20_BB   A 5  ? B 20 ? A 6  ? B 19 ? 
1 A DA  6  1_555 B DT  7  1_555 A DT  7  1_555 B DA  6  1_555 0.384  -0.762 3.433  3.274    -3.695   29.509  -0.658  -0.019 3.522  
-7.191  -6.371  29.910   6  AA_DA6DT7:DA18DT19_BB   A 6  ? B 19 ? A 7  ? B 18 ? 
1 A DT  7  1_555 B DA  6  1_555 A DT  8  1_555 B DA  5  1_555 -0.715 -0.402 3.580  -2.222   1.817    36.098  -0.927  0.807  3.593  
2.927   3.580   36.208   7  AA_DT7DT8:DA17DA18_BB   A 7  ? B 18 ? A 8  ? B 17 ? 
1 A DT  8  1_555 B DA  5  1_555 A 8OG 9  1_555 B DA  4  1_555 0.155  -3.341 2.252  -174.914 1.652    -16.329 1.661   -1.118 0.505  
-0.847  -89.635 -174.973 8  AA_DT88OG9:DA16DA17_BB  A 8  ? B 17 ? A 9  ? B 16 ? 
1 A 8OG 9  1_555 B DA  4  1_555 A DG  10 1_555 B DC  3  1_555 -2.904 -1.657 -0.619 139.497  -108.206 1.450   -1.406  0.709  -1.287 
-55.149 -71.096 176.545  9  AA_8OG9DG10:DC15DA16_BB A 9  ? B 16 ? A 10 ? B 15 ? 
1 A DG  10 1_555 B DC  3  1_555 A DC  11 1_555 B DG  2  1_555 -1.330 0.551  3.771  -4.285   -13.816  37.156  2.654   1.383  3.485  
-20.744 6.434   39.780   10 AA_DG10DC11:DG14DC15_BB A 10 ? B 15 ? A 11 ? B 14 ? 
1 A DC  11 1_555 B DG  2  1_555 A DG  12 1_555 B DC  1  1_555 1.045  -0.087 3.283  4.210    -2.137   35.030  0.179   -1.085 3.381  
-3.531  -6.955  35.337   11 AA_DC11DG12:DC13DG14_BB A 11 ? B 14 ? A 12 ? B 13 ? 
# 
_atom_sites.entry_id                    178D 
_atom_sites.fract_transf_matrix[1][1]   0.040535 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.024697 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.015352 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
N 
O 
P 
# 
loop_