data_183D
# 
_entry.id   183D 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.385 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   183D         pdb_0000183d 10.2210/pdb183d/pdb 
RCSB  BDJB57       ?            ?                   
WWPDB D_1000170185 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1995-02-27 
2 'Structure model' 1 1 2008-05-22 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2024-02-07 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Database references'       
5 4 'Structure model' 'Derived calculations'      
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' chem_comp_atom 
2 4 'Structure model' chem_comp_bond 
3 4 'Structure model' database_2     
4 4 'Structure model' struct_conn    
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 4 'Structure model' '_database_2.pdbx_DOI'                
2 4 'Structure model' '_database_2.pdbx_database_accession' 
3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        183D 
_pdbx_database_status.recvd_initial_deposition_date   1994-08-01 
_pdbx_database_status.deposit_site                    BNL 
_pdbx_database_status.process_site                    NDB 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Lipscomb, L.A.'    1 
'Peek, M.E.'        2 
'Morningstar, M.L.' 3 
'Verghis, S.M.'     4 
'Miller, E.M.'      5 
'Rich, A.'          6 
'Essigmann, J.M.'   7 
'Williams, L.D.'    8 
# 
_citation.id                        primary 
_citation.title                     'X-ray structure of a DNA decamer containing 7,8-dihydro-8-oxoguanine.' 
_citation.journal_abbrev            Proc.Natl.Acad.Sci.USA 
_citation.journal_volume            92 
_citation.page_first                719 
_citation.page_last                 723 
_citation.year                      1995 
_citation.journal_id_ASTM           PNASA6 
_citation.country                   US 
_citation.journal_id_ISSN           0027-8424 
_citation.journal_id_CSD            0040 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   7846041 
_citation.pdbx_database_id_DOI      10.1073/pnas.92.3.719 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Lipscomb, L.A.'    1 ? 
primary 'Peek, M.E.'        2 ? 
primary 'Morningstar, M.L.' 3 ? 
primary 'Verghis, S.M.'     4 ? 
primary 'Miller, E.M.'      5 ? 
primary 'Rich, A.'          6 ? 
primary 'Essigmann, J.M.'   7 ? 
primary 'Williams, L.D.'    8 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer syn 
;DNA (5'-D(*CP*CP*AP*(8OG)P*CP*GP*CP*TP*GP*G)-3')
;
3061.992 1  ? ? ? ? 
2 water   nat water                                              18.015   42 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   yes 
_entity_poly.pdbx_seq_one_letter_code       '(DC)(DC)(DA)(8OG)(DC)(DG)(DC)(DT)(DG)(DG)' 
_entity_poly.pdbx_seq_one_letter_code_can   CCAGCGCTGG 
_entity_poly.pdbx_strand_id                 A 
_entity_poly.pdbx_target_identifier         ? 
# 
_pdbx_entity_nonpoly.entity_id   2 
_pdbx_entity_nonpoly.name        water 
_pdbx_entity_nonpoly.comp_id     HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DC  n 
1 2  DC  n 
1 3  DA  n 
1 4  8OG n 
1 5  DC  n 
1 6  DG  n 
1 7  DC  n 
1 8  DT  n 
1 9  DG  n 
1 10 DG  n 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 
'C10 H14 N5 O8 P' 363.221 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE"        ?                                                       
'C10 H14 N5 O6 P' 331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"         ?                                                       
'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE"        ?                                                       
'C10 H14 N5 O7 P' 347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"                ?                                                       
'C10 H15 N2 O8 P' 322.208 
HOH non-polymer   . WATER                                       ?                                                       'H2 O' 
18.015  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DC  1  1  1  DC  C  A . n 
A 1 2  DC  2  2  2  DC  C  A . n 
A 1 3  DA  3  3  3  DA  A  A . n 
A 1 4  8OG 4  4  4  8OG +G A . n 
A 1 5  DC  5  5  5  DC  C  A . n 
A 1 6  DG  6  6  6  DG  G  A . n 
A 1 7  DC  7  7  7  DC  C  A . n 
A 1 8  DT  8  8  8  DT  T  A . n 
A 1 9  DG  9  9  9  DG  G  A . n 
A 1 10 DG  10 10 10 DG  G  A . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
B 2 HOH 1  11 11 HOH HOH A . 
B 2 HOH 2  12 12 HOH HOH A . 
B 2 HOH 3  13 13 HOH HOH A . 
B 2 HOH 4  14 14 HOH HOH A . 
B 2 HOH 5  15 15 HOH HOH A . 
B 2 HOH 6  16 16 HOH HOH A . 
B 2 HOH 7  17 17 HOH HOH A . 
B 2 HOH 8  18 18 HOH HOH A . 
B 2 HOH 9  19 19 HOH HOH A . 
B 2 HOH 10 20 20 HOH HOH A . 
B 2 HOH 11 21 21 HOH HOH A . 
B 2 HOH 12 22 22 HOH HOH A . 
B 2 HOH 13 23 23 HOH HOH A . 
B 2 HOH 14 24 24 HOH HOH A . 
B 2 HOH 15 25 25 HOH HOH A . 
B 2 HOH 16 26 26 HOH HOH A . 
B 2 HOH 17 27 27 HOH HOH A . 
B 2 HOH 18 28 28 HOH HOH A . 
B 2 HOH 19 29 29 HOH HOH A . 
B 2 HOH 20 30 30 HOH HOH A . 
B 2 HOH 21 31 31 HOH HOH A . 
B 2 HOH 22 32 32 HOH HOH A . 
B 2 HOH 23 33 33 HOH HOH A . 
B 2 HOH 24 34 34 HOH HOH A . 
B 2 HOH 25 35 35 HOH HOH A . 
B 2 HOH 26 36 36 HOH HOH A . 
B 2 HOH 27 37 37 HOH HOH A . 
B 2 HOH 28 38 38 HOH HOH A . 
B 2 HOH 29 39 39 HOH HOH A . 
B 2 HOH 30 40 40 HOH HOH A . 
B 2 HOH 31 41 41 HOH HOH A . 
B 2 HOH 32 42 42 HOH HOH A . 
B 2 HOH 33 43 43 HOH HOH A . 
B 2 HOH 34 44 44 HOH HOH A . 
B 2 HOH 35 45 45 HOH HOH A . 
B 2 HOH 36 46 46 HOH HOH A . 
B 2 HOH 37 47 47 HOH HOH A . 
B 2 HOH 38 48 48 HOH HOH A . 
B 2 HOH 39 49 49 HOH HOH A . 
B 2 HOH 40 50 50 HOH HOH A . 
B 2 HOH 41 51 51 HOH HOH A . 
B 2 HOH 42 52 52 HOH HOH A . 
# 
_software.name             X-PLOR 
_software.classification   refinement 
_software.version          . 
_software.citation_id      ? 
_software.pdbx_ordinal     1 
# 
_cell.entry_id           183D 
_cell.length_a           32.270 
_cell.length_b           25.560 
_cell.length_c           34.710 
_cell.angle_alpha        90.00 
_cell.angle_beta         115.77 
_cell.angle_gamma        90.00 
_cell.Z_PDB              4 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         183D 
_symmetry.space_group_name_H-M             'C 1 2 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                5 
# 
_exptl.entry_id          183D 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   ? 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.11 
_exptl_crystal.density_percent_sol   41.57 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, SITTING DROP' 
_exptl_crystal_grow.temp            277.00 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.60 
_exptl_crystal_grow.pdbx_details    'pH 7.60, VAPOR DIFFUSION, SITTING DROP, temperature 277.00K' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 WATER                ? ? ? 
1 2 1 MPD                  ? ? ? 
1 3 1 BIS-TRIS-PROPANE_HCL ? ? ? 
1 4 1 MGCL2                ? ? ? 
1 5 2 WATER                ? ? ? 
1 6 2 MPD                  ? ? ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           277.00 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'AREA DETECTOR' 
_diffrn_detector.type                   SDMS 
_diffrn_detector.pdbx_collection_date   ? 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   ? 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             ? 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   . 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      'ROTATING ANODE' 
_diffrn_source.type                        'RIGAKU RU200' 
_diffrn_source.pdbx_synchrotron_site       ? 
_diffrn_source.pdbx_synchrotron_beamline   ? 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     183D 
_reflns.observed_criterion_sigma_I   2.000 
_reflns.observed_criterion_sigma_F   ? 
_reflns.d_resolution_low             ? 
_reflns.d_resolution_high            1.600 
_reflns.number_obs                   3290 
_reflns.number_all                   12930 
_reflns.percent_possible_obs         ? 
_reflns.pdbx_Rmerge_I_obs            ? 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_refine.entry_id                                 183D 
_refine.ls_number_reflns_obs                     3290 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          2.000 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             10.000 
_refine.ls_d_res_high                            1.600 
_refine.ls_percent_reflns_obs                    95.400 
_refine.ls_R_factor_obs                          0.234 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       0.234 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   203 
_refine_hist.pdbx_number_atoms_ligand         1 
_refine_hist.number_atoms_solvent             42 
_refine_hist.number_atoms_total               246 
_refine_hist.d_res_high                       1.600 
_refine_hist.d_res_low                        10.000 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
x_bond_d                0.020 ? ? ? 'X-RAY DIFFRACTION' ? 
x_bond_d_na             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_bond_d_prot           ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_d               ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_d_na            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_d_prot          ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_deg             3.60  ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_deg_na          ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_deg_prot        ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_dihedral_angle_d      ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_dihedral_angle_d_na   ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_dihedral_angle_d_prot ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_improper_angle_d      ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_improper_angle_d_na   ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_improper_angle_d_prot ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_mcbond_it             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_mcangle_it            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_scbond_it             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_scangle_it            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_database_PDB_matrix.entry_id          183D 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  183D 
_struct.title                     'X-RAY STRUCTURE OF A DNA DECAMER CONTAINING 7, 8-DIHYDRO-8-OXOGUANINE' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        183D 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'B-DNA, DOUBLE HELIX, MODIFIED, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    183D 
_struct_ref.pdbx_db_accession          183D 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
_struct_ref_seq.align_id                      1 
_struct_ref_seq.ref_id                        1 
_struct_ref_seq.pdbx_PDB_id_code              183D 
_struct_ref_seq.pdbx_strand_id                A 
_struct_ref_seq.seq_align_beg                 1 
_struct_ref_seq.pdbx_seq_align_beg_ins_code   ? 
_struct_ref_seq.seq_align_end                 10 
_struct_ref_seq.pdbx_seq_align_end_ins_code   ? 
_struct_ref_seq.pdbx_db_accession             183D 
_struct_ref_seq.db_align_beg                  1 
_struct_ref_seq.pdbx_db_align_beg_ins_code    ? 
_struct_ref_seq.db_align_end                  10 
_struct_ref_seq.pdbx_db_align_end_ins_code    ? 
_struct_ref_seq.pdbx_auth_seq_align_beg       1 
_struct_ref_seq.pdbx_auth_seq_align_end       10 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1,2 
_pdbx_struct_assembly_gen.asym_id_list      A,B 
# 
loop_
_pdbx_struct_oper_list.id 
_pdbx_struct_oper_list.type 
_pdbx_struct_oper_list.name 
_pdbx_struct_oper_list.symmetry_operation 
_pdbx_struct_oper_list.matrix[1][1] 
_pdbx_struct_oper_list.matrix[1][2] 
_pdbx_struct_oper_list.matrix[1][3] 
_pdbx_struct_oper_list.vector[1] 
_pdbx_struct_oper_list.matrix[2][1] 
_pdbx_struct_oper_list.matrix[2][2] 
_pdbx_struct_oper_list.matrix[2][3] 
_pdbx_struct_oper_list.vector[2] 
_pdbx_struct_oper_list.matrix[3][1] 
_pdbx_struct_oper_list.matrix[3][2] 
_pdbx_struct_oper_list.matrix[3][3] 
_pdbx_struct_oper_list.vector[3] 
1 'identity operation'         1_555 x,y,z   1.0000000000  0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000  0.0000000000 
2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 
# 
_struct_biol.id   1 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A DA  3  "O3'" ? ? ? 1_555 A 8OG 4  P  ? ? A DA  3  A 8OG 4  1_555 ? ? ? ? ? ? ?            1.625 ? ? 
covale2  covale both ? A 8OG 4  "O3'" ? ? ? 1_555 A DC  5  P  ? ? A 8OG 4  A DC  5  1_555 ? ? ? ? ? ? ?            1.572 ? ? 
hydrog1  hydrog ?    ? A DC  1  N3    ? ? ? 1_555 A DG  10 N1 ? ? A DC  1  A DG  10 2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ?    ? A DC  1  N4    ? ? ? 1_555 A DG  10 O6 ? ? A DC  1  A DG  10 2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ?    ? A DC  1  O2    ? ? ? 1_555 A DG  10 N2 ? ? A DC  1  A DG  10 2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ?    ? A DC  2  N3    ? ? ? 1_555 A DG  9  N1 ? ? A DC  2  A DG  9  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ?    ? A DC  2  N4    ? ? ? 1_555 A DG  9  O6 ? ? A DC  2  A DG  9  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ?    ? A DC  2  O2    ? ? ? 1_555 A DG  9  N2 ? ? A DC  2  A DG  9  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ?    ? A DA  3  N1    ? ? ? 1_555 A DT  8  N3 ? ? A DA  3  A DT  8  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ?    ? A DA  3  N6    ? ? ? 1_555 A DT  8  O4 ? ? A DA  3  A DT  8  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ?    ? A 8OG 4  N1    ? ? ? 1_555 A DC  7  N3 ? ? A 8OG 4  A DC  7  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ?    ? A 8OG 4  N2    ? ? ? 1_555 A DC  7  O2 ? ? A 8OG 4  A DC  7  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ?    ? A 8OG 4  O6    ? ? ? 1_555 A DC  7  N4 ? ? A 8OG 4  A DC  7  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ?    ? A DC  5  N3    ? ? ? 1_555 A DG  6  N1 ? ? A DC  5  A DG  6  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ?    ? A DC  5  N4    ? ? ? 1_555 A DG  6  O6 ? ? A DC  5  A DG  6  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ?    ? A DC  5  O2    ? ? ? 1_555 A DG  6  N2 ? ? A DC  5  A DG  6  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ?    ? A DG  6  N1    ? ? ? 1_555 A DC  5  N3 ? ? A DG  6  A DC  5  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ?    ? A DG  6  N2    ? ? ? 1_555 A DC  5  O2 ? ? A DG  6  A DC  5  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ?    ? A DG  6  O6    ? ? ? 1_555 A DC  5  N4 ? ? A DG  6  A DC  5  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ?    ? A DC  7  N3    ? ? ? 1_555 A 8OG 4  N1 ? ? A DC  7  A 8OG 4  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog19 hydrog ?    ? A DC  7  N4    ? ? ? 1_555 A 8OG 4  O6 ? ? A DC  7  A 8OG 4  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog20 hydrog ?    ? A DC  7  O2    ? ? ? 1_555 A 8OG 4  N2 ? ? A DC  7  A 8OG 4  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog21 hydrog ?    ? A DT  8  N3    ? ? ? 1_555 A DA  3  N1 ? ? A DT  8  A DA  3  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog22 hydrog ?    ? A DT  8  O4    ? ? ? 1_555 A DA  3  N6 ? ? A DT  8  A DA  3  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog23 hydrog ?    ? A DG  9  N1    ? ? ? 1_555 A DC  2  N3 ? ? A DG  9  A DC  2  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog24 hydrog ?    ? A DG  9  N2    ? ? ? 1_555 A DC  2  O2 ? ? A DG  9  A DC  2  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog25 hydrog ?    ? A DG  9  O6    ? ? ? 1_555 A DC  2  N4 ? ? A DG  9  A DC  2  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog26 hydrog ?    ? A DG  10 N1    ? ? ? 1_555 A DC  1  N3 ? ? A DG  10 A DC  1  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog27 hydrog ?    ? A DG  10 N2    ? ? ? 1_555 A DC  1  O2 ? ? A DG  10 A DC  1  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog28 hydrog ?    ? A DG  10 O6    ? ? ? 1_555 A DC  1  N4 ? ? A DG  10 A DC  1  2_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
hydrog ? ? 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1 1 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.555 1.512 0.043 0.007 N 
2 1 "C5'" A DG 6 ? ? "C4'" A DG 6 ? ? 1.562 1.512 0.050 0.007 N 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 "O4'" A DC  2 ? ? "C1'" A DC 2 ? ? N1    A DC 2 ? ? 112.66 108.30 4.36   0.30 N 
2  1 "O4'" A DA  3 ? ? "C1'" A DA 3 ? ? N9    A DA 3 ? ? 110.19 108.30 1.89   0.30 N 
3  1 "O3'" A 8OG 4 ? ? P     A DC 5 ? ? "O5'" A DC 5 ? ? 89.65  104.00 -14.35 1.90 Y 
4  1 P     A DC  5 ? ? "O5'" A DC 5 ? ? "C5'" A DC 5 ? ? 130.79 120.90 9.89   1.60 N 
5  1 N1    A DC  5 ? ? C2    A DC 5 ? ? O2    A DC 5 ? ? 123.71 118.90 4.81   0.60 N 
6  1 "C3'" A DC  5 ? ? "O3'" A DC 5 ? ? P     A DG 6 ? ? 129.17 119.70 9.47   1.20 Y 
7  1 "O4'" A DG  6 ? ? "C1'" A DG 6 ? ? N9    A DG 6 ? ? 114.32 108.30 6.02   0.30 N 
8  1 "O4'" A DC  7 ? ? "C1'" A DC 7 ? ? N1    A DC 7 ? ? 112.52 108.30 4.22   0.30 N 
9  1 N1    A DC  7 ? ? C2    A DC 7 ? ? O2    A DC 7 ? ? 123.30 118.90 4.40   0.60 N 
10 1 C5    A DT  8 ? ? C6    A DT 8 ? ? N1    A DT 8 ? ? 119.81 123.70 -3.89  0.60 N 
11 1 N3    A DT  8 ? ? C2    A DT 8 ? ? O2    A DT 8 ? ? 117.78 122.30 -4.52  0.60 N 
12 1 C6    A DT  8 ? ? C5    A DT 8 ? ? C7    A DT 8 ? ? 118.70 122.90 -4.20  0.60 N 
# 
_pdbx_validate_chiral.id              1 
_pdbx_validate_chiral.PDB_model_num   1 
_pdbx_validate_chiral.auth_atom_id    "C1'" 
_pdbx_validate_chiral.label_alt_id    ? 
_pdbx_validate_chiral.auth_asym_id    A 
_pdbx_validate_chiral.auth_comp_id    8OG 
_pdbx_validate_chiral.auth_seq_id     4 
_pdbx_validate_chiral.PDB_ins_code    ? 
_pdbx_validate_chiral.details         PLANAR 
_pdbx_validate_chiral.omega           . 
# 
loop_
_pdbx_validate_planes.id 
_pdbx_validate_planes.PDB_model_num 
_pdbx_validate_planes.auth_comp_id 
_pdbx_validate_planes.auth_asym_id 
_pdbx_validate_planes.auth_seq_id 
_pdbx_validate_planes.PDB_ins_code 
_pdbx_validate_planes.label_alt_id 
_pdbx_validate_planes.rmsd 
_pdbx_validate_planes.type 
1 1 DA A 3 ? ? 0.065 'SIDE CHAIN' 
2 1 DG A 6 ? ? 0.094 'SIDE CHAIN' 
3 1 DC A 7 ? ? 0.076 'SIDE CHAIN' 
# 
_pdbx_struct_mod_residue.id               1 
_pdbx_struct_mod_residue.label_asym_id    A 
_pdbx_struct_mod_residue.label_comp_id    8OG 
_pdbx_struct_mod_residue.label_seq_id     4 
_pdbx_struct_mod_residue.auth_asym_id     A 
_pdbx_struct_mod_residue.auth_comp_id     8OG 
_pdbx_struct_mod_residue.auth_seq_id      4 
_pdbx_struct_mod_residue.PDB_ins_code     ? 
_pdbx_struct_mod_residue.parent_comp_id   DG 
_pdbx_struct_mod_residue.details          ? 
# 
loop_
_refine_B_iso.class 
_refine_B_iso.details 
_refine_B_iso.treatment 
_refine_B_iso.pdbx_refine_id 
'ALL ATOMS'  ? ? 'X-RAY DIFFRACTION' 
'ALL WATERS' ? ? 'X-RAY DIFFRACTION' 
# 
loop_
_refine_occupancy.class 
_refine_occupancy.treatment 
_refine_occupancy.pdbx_refine_id 
'ALL ATOMS'  ? 'X-RAY DIFFRACTION' 
'ALL WATERS' ? 'X-RAY DIFFRACTION' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
8OG OP3    O N N 1   
8OG P      P N N 2   
8OG OP1    O N N 3   
8OG OP2    O N N 4   
8OG "O5'"  O N N 5   
8OG "C5'"  C N N 6   
8OG "C4'"  C N R 7   
8OG "O4'"  O N N 8   
8OG "C3'"  C N S 9   
8OG "O3'"  O N N 10  
8OG "C2'"  C N N 11  
8OG "C1'"  C N R 12  
8OG N9     N N N 13  
8OG C8     C N N 14  
8OG N7     N N N 15  
8OG C5     C N N 16  
8OG C6     C N N 17  
8OG O6     O N N 18  
8OG N1     N N N 19  
8OG C2     C N N 20  
8OG N2     N N N 21  
8OG N3     N N N 22  
8OG C4     C N N 23  
8OG O8     O N N 24  
8OG HOP3   H N N 25  
8OG HOP2   H N N 26  
8OG "H5'"  H N N 27  
8OG "H5''" H N N 28  
8OG "H4'"  H N N 29  
8OG "H3'"  H N N 30  
8OG "HO3'" H N N 31  
8OG "H2'"  H N N 32  
8OG "H2''" H N N 33  
8OG "H1'"  H N N 34  
8OG H7     H N N 35  
8OG H1     H N N 36  
8OG H21    H N N 37  
8OG H22    H N N 38  
DA  OP3    O N N 39  
DA  P      P N N 40  
DA  OP1    O N N 41  
DA  OP2    O N N 42  
DA  "O5'"  O N N 43  
DA  "C5'"  C N N 44  
DA  "C4'"  C N R 45  
DA  "O4'"  O N N 46  
DA  "C3'"  C N S 47  
DA  "O3'"  O N N 48  
DA  "C2'"  C N N 49  
DA  "C1'"  C N R 50  
DA  N9     N Y N 51  
DA  C8     C Y N 52  
DA  N7     N Y N 53  
DA  C5     C Y N 54  
DA  C6     C Y N 55  
DA  N6     N N N 56  
DA  N1     N Y N 57  
DA  C2     C Y N 58  
DA  N3     N Y N 59  
DA  C4     C Y N 60  
DA  HOP3   H N N 61  
DA  HOP2   H N N 62  
DA  "H5'"  H N N 63  
DA  "H5''" H N N 64  
DA  "H4'"  H N N 65  
DA  "H3'"  H N N 66  
DA  "HO3'" H N N 67  
DA  "H2'"  H N N 68  
DA  "H2''" H N N 69  
DA  "H1'"  H N N 70  
DA  H8     H N N 71  
DA  H61    H N N 72  
DA  H62    H N N 73  
DA  H2     H N N 74  
DC  OP3    O N N 75  
DC  P      P N N 76  
DC  OP1    O N N 77  
DC  OP2    O N N 78  
DC  "O5'"  O N N 79  
DC  "C5'"  C N N 80  
DC  "C4'"  C N R 81  
DC  "O4'"  O N N 82  
DC  "C3'"  C N S 83  
DC  "O3'"  O N N 84  
DC  "C2'"  C N N 85  
DC  "C1'"  C N R 86  
DC  N1     N N N 87  
DC  C2     C N N 88  
DC  O2     O N N 89  
DC  N3     N N N 90  
DC  C4     C N N 91  
DC  N4     N N N 92  
DC  C5     C N N 93  
DC  C6     C N N 94  
DC  HOP3   H N N 95  
DC  HOP2   H N N 96  
DC  "H5'"  H N N 97  
DC  "H5''" H N N 98  
DC  "H4'"  H N N 99  
DC  "H3'"  H N N 100 
DC  "HO3'" H N N 101 
DC  "H2'"  H N N 102 
DC  "H2''" H N N 103 
DC  "H1'"  H N N 104 
DC  H41    H N N 105 
DC  H42    H N N 106 
DC  H5     H N N 107 
DC  H6     H N N 108 
DG  OP3    O N N 109 
DG  P      P N N 110 
DG  OP1    O N N 111 
DG  OP2    O N N 112 
DG  "O5'"  O N N 113 
DG  "C5'"  C N N 114 
DG  "C4'"  C N R 115 
DG  "O4'"  O N N 116 
DG  "C3'"  C N S 117 
DG  "O3'"  O N N 118 
DG  "C2'"  C N N 119 
DG  "C1'"  C N R 120 
DG  N9     N Y N 121 
DG  C8     C Y N 122 
DG  N7     N Y N 123 
DG  C5     C Y N 124 
DG  C6     C N N 125 
DG  O6     O N N 126 
DG  N1     N N N 127 
DG  C2     C N N 128 
DG  N2     N N N 129 
DG  N3     N N N 130 
DG  C4     C Y N 131 
DG  HOP3   H N N 132 
DG  HOP2   H N N 133 
DG  "H5'"  H N N 134 
DG  "H5''" H N N 135 
DG  "H4'"  H N N 136 
DG  "H3'"  H N N 137 
DG  "HO3'" H N N 138 
DG  "H2'"  H N N 139 
DG  "H2''" H N N 140 
DG  "H1'"  H N N 141 
DG  H8     H N N 142 
DG  H1     H N N 143 
DG  H21    H N N 144 
DG  H22    H N N 145 
DT  OP3    O N N 146 
DT  P      P N N 147 
DT  OP1    O N N 148 
DT  OP2    O N N 149 
DT  "O5'"  O N N 150 
DT  "C5'"  C N N 151 
DT  "C4'"  C N R 152 
DT  "O4'"  O N N 153 
DT  "C3'"  C N S 154 
DT  "O3'"  O N N 155 
DT  "C2'"  C N N 156 
DT  "C1'"  C N R 157 
DT  N1     N N N 158 
DT  C2     C N N 159 
DT  O2     O N N 160 
DT  N3     N N N 161 
DT  C4     C N N 162 
DT  O4     O N N 163 
DT  C5     C N N 164 
DT  C7     C N N 165 
DT  C6     C N N 166 
DT  HOP3   H N N 167 
DT  HOP2   H N N 168 
DT  "H5'"  H N N 169 
DT  "H5''" H N N 170 
DT  "H4'"  H N N 171 
DT  "H3'"  H N N 172 
DT  "HO3'" H N N 173 
DT  "H2'"  H N N 174 
DT  "H2''" H N N 175 
DT  "H1'"  H N N 176 
DT  H3     H N N 177 
DT  H71    H N N 178 
DT  H72    H N N 179 
DT  H73    H N N 180 
DT  H6     H N N 181 
HOH O      O N N 182 
HOH H1     H N N 183 
HOH H2     H N N 184 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8OG OP3   P      sing N N 1   
8OG OP3   HOP3   sing N N 2   
8OG P     OP1    doub N N 3   
8OG P     OP2    sing N N 4   
8OG P     "O5'"  sing N N 5   
8OG OP2   HOP2   sing N N 6   
8OG "O5'" "C5'"  sing N N 7   
8OG "C5'" "C4'"  sing N N 8   
8OG "C5'" "H5'"  sing N N 9   
8OG "C5'" "H5''" sing N N 10  
8OG "C4'" "O4'"  sing N N 11  
8OG "C4'" "C3'"  sing N N 12  
8OG "C4'" "H4'"  sing N N 13  
8OG "O4'" "C1'"  sing N N 14  
8OG "C3'" "O3'"  sing N N 15  
8OG "C3'" "C2'"  sing N N 16  
8OG "C3'" "H3'"  sing N N 17  
8OG "O3'" "HO3'" sing N N 18  
8OG "C2'" "C1'"  sing N N 19  
8OG "C2'" "H2'"  sing N N 20  
8OG "C2'" "H2''" sing N N 21  
8OG "C1'" N9     sing N N 22  
8OG "C1'" "H1'"  sing N N 23  
8OG N9    C8     sing N N 24  
8OG N9    C4     sing N N 25  
8OG C8    N7     sing N N 26  
8OG C8    O8     doub N N 27  
8OG N7    C5     sing N N 28  
8OG N7    H7     sing N N 29  
8OG C5    C6     sing N N 30  
8OG C5    C4     doub N N 31  
8OG C6    O6     doub N N 32  
8OG C6    N1     sing N N 33  
8OG N1    C2     sing N N 34  
8OG N1    H1     sing N N 35  
8OG C2    N2     sing N N 36  
8OG C2    N3     doub N N 37  
8OG N2    H21    sing N N 38  
8OG N2    H22    sing N N 39  
8OG N3    C4     sing N N 40  
DA  OP3   P      sing N N 41  
DA  OP3   HOP3   sing N N 42  
DA  P     OP1    doub N N 43  
DA  P     OP2    sing N N 44  
DA  P     "O5'"  sing N N 45  
DA  OP2   HOP2   sing N N 46  
DA  "O5'" "C5'"  sing N N 47  
DA  "C5'" "C4'"  sing N N 48  
DA  "C5'" "H5'"  sing N N 49  
DA  "C5'" "H5''" sing N N 50  
DA  "C4'" "O4'"  sing N N 51  
DA  "C4'" "C3'"  sing N N 52  
DA  "C4'" "H4'"  sing N N 53  
DA  "O4'" "C1'"  sing N N 54  
DA  "C3'" "O3'"  sing N N 55  
DA  "C3'" "C2'"  sing N N 56  
DA  "C3'" "H3'"  sing N N 57  
DA  "O3'" "HO3'" sing N N 58  
DA  "C2'" "C1'"  sing N N 59  
DA  "C2'" "H2'"  sing N N 60  
DA  "C2'" "H2''" sing N N 61  
DA  "C1'" N9     sing N N 62  
DA  "C1'" "H1'"  sing N N 63  
DA  N9    C8     sing Y N 64  
DA  N9    C4     sing Y N 65  
DA  C8    N7     doub Y N 66  
DA  C8    H8     sing N N 67  
DA  N7    C5     sing Y N 68  
DA  C5    C6     sing Y N 69  
DA  C5    C4     doub Y N 70  
DA  C6    N6     sing N N 71  
DA  C6    N1     doub Y N 72  
DA  N6    H61    sing N N 73  
DA  N6    H62    sing N N 74  
DA  N1    C2     sing Y N 75  
DA  C2    N3     doub Y N 76  
DA  C2    H2     sing N N 77  
DA  N3    C4     sing Y N 78  
DC  OP3   P      sing N N 79  
DC  OP3   HOP3   sing N N 80  
DC  P     OP1    doub N N 81  
DC  P     OP2    sing N N 82  
DC  P     "O5'"  sing N N 83  
DC  OP2   HOP2   sing N N 84  
DC  "O5'" "C5'"  sing N N 85  
DC  "C5'" "C4'"  sing N N 86  
DC  "C5'" "H5'"  sing N N 87  
DC  "C5'" "H5''" sing N N 88  
DC  "C4'" "O4'"  sing N N 89  
DC  "C4'" "C3'"  sing N N 90  
DC  "C4'" "H4'"  sing N N 91  
DC  "O4'" "C1'"  sing N N 92  
DC  "C3'" "O3'"  sing N N 93  
DC  "C3'" "C2'"  sing N N 94  
DC  "C3'" "H3'"  sing N N 95  
DC  "O3'" "HO3'" sing N N 96  
DC  "C2'" "C1'"  sing N N 97  
DC  "C2'" "H2'"  sing N N 98  
DC  "C2'" "H2''" sing N N 99  
DC  "C1'" N1     sing N N 100 
DC  "C1'" "H1'"  sing N N 101 
DC  N1    C2     sing N N 102 
DC  N1    C6     sing N N 103 
DC  C2    O2     doub N N 104 
DC  C2    N3     sing N N 105 
DC  N3    C4     doub N N 106 
DC  C4    N4     sing N N 107 
DC  C4    C5     sing N N 108 
DC  N4    H41    sing N N 109 
DC  N4    H42    sing N N 110 
DC  C5    C6     doub N N 111 
DC  C5    H5     sing N N 112 
DC  C6    H6     sing N N 113 
DG  OP3   P      sing N N 114 
DG  OP3   HOP3   sing N N 115 
DG  P     OP1    doub N N 116 
DG  P     OP2    sing N N 117 
DG  P     "O5'"  sing N N 118 
DG  OP2   HOP2   sing N N 119 
DG  "O5'" "C5'"  sing N N 120 
DG  "C5'" "C4'"  sing N N 121 
DG  "C5'" "H5'"  sing N N 122 
DG  "C5'" "H5''" sing N N 123 
DG  "C4'" "O4'"  sing N N 124 
DG  "C4'" "C3'"  sing N N 125 
DG  "C4'" "H4'"  sing N N 126 
DG  "O4'" "C1'"  sing N N 127 
DG  "C3'" "O3'"  sing N N 128 
DG  "C3'" "C2'"  sing N N 129 
DG  "C3'" "H3'"  sing N N 130 
DG  "O3'" "HO3'" sing N N 131 
DG  "C2'" "C1'"  sing N N 132 
DG  "C2'" "H2'"  sing N N 133 
DG  "C2'" "H2''" sing N N 134 
DG  "C1'" N9     sing N N 135 
DG  "C1'" "H1'"  sing N N 136 
DG  N9    C8     sing Y N 137 
DG  N9    C4     sing Y N 138 
DG  C8    N7     doub Y N 139 
DG  C8    H8     sing N N 140 
DG  N7    C5     sing Y N 141 
DG  C5    C6     sing N N 142 
DG  C5    C4     doub Y N 143 
DG  C6    O6     doub N N 144 
DG  C6    N1     sing N N 145 
DG  N1    C2     sing N N 146 
DG  N1    H1     sing N N 147 
DG  C2    N2     sing N N 148 
DG  C2    N3     doub N N 149 
DG  N2    H21    sing N N 150 
DG  N2    H22    sing N N 151 
DG  N3    C4     sing N N 152 
DT  OP3   P      sing N N 153 
DT  OP3   HOP3   sing N N 154 
DT  P     OP1    doub N N 155 
DT  P     OP2    sing N N 156 
DT  P     "O5'"  sing N N 157 
DT  OP2   HOP2   sing N N 158 
DT  "O5'" "C5'"  sing N N 159 
DT  "C5'" "C4'"  sing N N 160 
DT  "C5'" "H5'"  sing N N 161 
DT  "C5'" "H5''" sing N N 162 
DT  "C4'" "O4'"  sing N N 163 
DT  "C4'" "C3'"  sing N N 164 
DT  "C4'" "H4'"  sing N N 165 
DT  "O4'" "C1'"  sing N N 166 
DT  "C3'" "O3'"  sing N N 167 
DT  "C3'" "C2'"  sing N N 168 
DT  "C3'" "H3'"  sing N N 169 
DT  "O3'" "HO3'" sing N N 170 
DT  "C2'" "C1'"  sing N N 171 
DT  "C2'" "H2'"  sing N N 172 
DT  "C2'" "H2''" sing N N 173 
DT  "C1'" N1     sing N N 174 
DT  "C1'" "H1'"  sing N N 175 
DT  N1    C2     sing N N 176 
DT  N1    C6     sing N N 177 
DT  C2    O2     doub N N 178 
DT  C2    N3     sing N N 179 
DT  N3    C4     sing N N 180 
DT  N3    H3     sing N N 181 
DT  C4    O4     doub N N 182 
DT  C4    C5     sing N N 183 
DT  C5    C7     sing N N 184 
DT  C5    C6     doub N N 185 
DT  C7    H71    sing N N 186 
DT  C7    H72    sing N N 187 
DT  C7    H73    sing N N 188 
DT  C6    H6     sing N N 189 
HOH O     H1     sing N N 190 
HOH O     H2     sing N N 191 
# 
_ndb_struct_conf_na.entry_id   183D 
_ndb_struct_conf_na.feature    'b-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DC  1  1_555 A DG  10 2_555 0.084  -0.120 0.280  -5.284 -10.523 -1.087 1  A_DC1:DG10_A A 1  ? A 10 ? 19 1 
1 A DC  2  1_555 A DG  9  2_555 0.315  -0.184 -0.057 -0.577 -10.021 -1.708 2  A_DC2:DG9_A  A 2  ? A 9  ? 19 1 
1 A DA  3  1_555 A DT  8  2_555 -0.002 -0.184 0.209  0.883  -7.569  1.143  3  A_DA3:DT8_A  A 3  ? A 8  ? 20 1 
1 A 8OG 4  1_555 A DC  7  2_555 -0.014 -0.125 0.467  2.461  -6.679  -3.930 4  A_8OG4:DC7_A A 4  ? A 7  ? 19 1 
1 A DC  5  1_555 A DG  6  2_555 -0.009 -0.048 -0.094 2.715  -8.767  -1.614 5  A_DC5:DG6_A  A 5  ? A 6  ? 19 1 
1 A DG  6  1_555 A DC  5  2_555 0.009  -0.048 -0.094 -2.715 -8.767  -1.614 6  A_DG6:DC5_A  A 6  ? A 5  ? 19 1 
1 A DC  7  1_555 A 8OG 4  2_555 0.014  -0.125 0.467  -2.462 -6.679  -3.930 7  A_DC7:8OG4_A A 7  ? A 4  ? 19 1 
1 A DT  8  1_555 A DA  3  2_555 0.002  -0.184 0.209  -0.883 -7.569  1.143  8  A_DT8:DA3_A  A 8  ? A 3  ? 20 1 
1 A DG  9  1_555 A DC  2  2_555 -0.315 -0.184 -0.057 0.577  -10.021 -1.708 9  A_DG9:DC2_A  A 9  ? A 2  ? 19 1 
1 A DG  10 1_555 A DC  1  2_555 -0.084 -0.120 0.280  5.284  -10.523 -1.087 10 A_DG10:DC1_A A 10 ? A 1  ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DC  1 1_555 A DG  10 2_555 A DC  2  1_555 A DG  9 2_555 -0.451 0.653 3.276 4.624  6.526  29.411 -0.077 1.794  3.236 12.563 
-8.903 30.456 1 AA_DC1DC2:DG9DG10_AA A 1 ? A 10 ? A 2  ? A 9 ? 
1 A DC  2 1_555 A DG  9  2_555 A DA  3  1_555 A DT  8 2_555 0.170  2.806 3.265 -1.613 -7.518 49.505 3.825  -0.310 2.831 -8.916 
1.913  50.062 2 AA_DC2DA3:DT8DG9_AA  A 2 ? A 9  ? A 3  ? A 8 ? 
1 A DA  3 1_555 A DT  8  2_555 A 8OG 4  1_555 A DC  7 2_555 0.551  0.515 3.383 -3.620 8.430  22.911 -1.504 -2.455 3.241 20.213 
8.681  24.657 3 AA_DA38OG4:DC7DT8_AA A 3 ? A 8  ? A 4  ? A 7 ? 
1 A 8OG 4 1_555 A DC  7  2_555 A DC  5  1_555 A DG  6 2_555 -0.233 0.369 3.407 5.129  -1.195 37.040 0.738  1.062  3.333 -1.869 
-8.024 37.399 4 AA_8OG4DC5:DG6DC7_AA A 4 ? A 7  ? A 5  ? A 6 ? 
1 A DC  5 1_555 A DG  6  2_555 A DG  6  1_555 A DC  5 2_555 0.000  0.293 3.512 0.000  6.976  42.440 -0.347 0.000  3.515 9.559  
0.000  42.983 5 AA_DC5DG6:DC5DG6_AA  A 5 ? A 6  ? A 6  ? A 5 ? 
1 A DG  6 1_555 A DC  5  2_555 A DC  7  1_555 A 8OG 4 2_555 0.233  0.369 3.407 -5.129 -1.195 37.040 0.738  -1.062 3.333 -1.869 
8.024  37.399 6 AA_DG6DC7:8OG4DC5_AA A 6 ? A 5  ? A 7  ? A 4 ? 
1 A DC  7 1_555 A 8OG 4  2_555 A DT  8  1_555 A DA  3 2_555 -0.551 0.515 3.383 3.620  8.430  22.911 -1.504 2.455  3.241 20.213 
-8.681 24.657 7 AA_DC7DT8:DA38OG4_AA A 7 ? A 4  ? A 8  ? A 3 ? 
1 A DT  8 1_555 A DA  3  2_555 A DG  9  1_555 A DC  2 2_555 -0.170 2.806 3.265 1.613  -7.518 49.505 3.825  0.310  2.831 -8.915 
-1.913 50.062 8 AA_DT8DG9:DC2DA3_AA  A 8 ? A 3  ? A 9  ? A 2 ? 
1 A DG  9 1_555 A DC  2  2_555 A DG  10 1_555 A DC  1 2_555 0.451  0.653 3.276 -4.624 6.526  29.411 -0.077 -1.794 3.236 12.563 
8.903  30.456 9 AA_DG9DG10:DC1DC2_AA A 9 ? A 2  ? A 10 ? A 1 ? 
# 
_atom_sites.entry_id                    183D 
_atom_sites.fract_transf_matrix[1][1]   0.030989 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.014961 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.039124 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.031992 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
H 
N 
O 
P 
# 
loop_