HEADER COMPLEX (TRANSFERASE/PEPTIDE) 09-DEC-97 1A08 TITLE C-SRC (SH2 DOMAIN) COMPLEXED WITH ACE-DIFLUORO PHOSPHOTYR-GLU-(N,N- TITLE 2 DIPENTYL AMINE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: C-SRC TYROSINE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SH2 DOMAIN; COMPND 5 EC: 2.7.1.112; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ACE-DIFLUORO PHOSPHOTYR-GLU-(N,N-DIPENTYL AMINE); COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELLULAR_LOCATION: CYTOPLASM; SOURCE 6 GENE: SRC; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_CELLULAR_LOCATION: CYTOPLASM; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET11B; SOURCE 12 EXPRESSION_SYSTEM_GENE: SRC; SOURCE 13 MOL_ID: 2 KEYWDS COMPLEX (TRANSFERASE-PEPTIDE), COMPLEX (TRANSFERASE-PEPTIDE) COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.SHEWCHUK,S.JORDAN REVDAT 4 02-AUG-23 1A08 1 REMARK LINK REVDAT 3 07-MAR-18 1A08 1 REMARK REVDAT 2 24-FEB-09 1A08 1 VERSN REVDAT 1 08-APR-98 1A08 0 JRNL AUTH P.S.CHARIFSON,L.M.SHEWCHUK,W.ROCQUE,C.W.HUMMEL,S.R.JORDAN, JRNL AUTH 2 C.MOHR,G.J.PACOFSKY,M.R.PEEL,M.RODRIGUEZ,D.D.STERNBACH, JRNL AUTH 3 T.G.CONSLER JRNL TITL PEPTIDE LIGANDS OF PP60(C-SRC) SH2 DOMAINS: A THERMODYNAMIC JRNL TITL 2 AND STRUCTURAL STUDY. JRNL REF BIOCHEMISTRY V. 36 6283 1997 JRNL REFN ISSN 0006-2960 JRNL PMID 9174343 JRNL DOI 10.1021/BI970019N REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 100000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 83.0 REMARK 3 NUMBER OF REFLECTIONS : 10965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.30 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 67.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1724 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 27 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.015 REMARK 3 BOND ANGLES (DEGREES) : 3.128 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.09 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.400 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : UNRESTRAINED REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARAM19X.PRO REMARK 3 PARAMETER FILE 2 : PARAM19.FTY REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPH19X.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH19.FTY REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: PARTIALLY REFINED REMARK 4 REMARK 4 1A08 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000170230. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : MAR-94 REMARK 200 TEMPERATURE (KELVIN) : 277 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : SIEMENS REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE(002) REMARK 200 OPTICS : COLLIMATOR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS REMARK 200 DATA SCALING SOFTWARE : R-AXIS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12482 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 65.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.23000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.1 REMARK 200 STARTING MODEL: PDB ENTRY 1SHD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM 0.1 M REMARK 280 ACETATE, PH 4.6, 2.1 M AMMONIUM SULFATE AT 4 C., TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.95000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.60000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.70000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.60000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.95000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.70000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 143 REMARK 465 ASP A 144 REMARK 465 MET B 143 REMARK 465 ASP B 144 REMARK 465 SER B 145 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 169 CG CD OE1 OE2 REMARK 470 ARG A 172 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 184 CG CD CE NZ REMARK 470 ASN A 196 CG OD1 ND2 REMARK 470 LYS A 198 CG CD CE NZ REMARK 470 GLN A 222 CG CD OE1 NE2 REMARK 470 GLN B 147 CG CD OE1 NE2 REMARK 470 LYS B 155 CG CD CE NZ REMARK 470 ARG B 159 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 169 CG CD OE1 OE2 REMARK 470 LYS B 184 CG CD CE NZ REMARK 470 ASN B 196 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ILE A 217 H2 HOH A 506 0.90 REMARK 500 H ILE B 217 H2 HOH B 510 1.05 REMARK 500 HH TYR B 233 H1 HOH B 510 1.07 REMARK 500 HH TYR A 216 H1 HOH A 503 1.09 REMARK 500 C FTY C 101 H GLU C 102 1.39 REMARK 500 O2P FTY C 101 H2 HOH C 517 1.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 204 NE2 HIS A 204 CD2 -0.075 REMARK 500 HIS B 204 NE2 HIS B 204 CD2 -0.069 REMARK 500 LEU B 240 C CYS B 241 N -0.168 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 150 C - N - CA ANGL. DEV. = 16.1 DEGREES REMARK 500 ARG A 158 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 ARG A 158 NE - CZ - NH2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ARG A 163 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 THR A 182 N - CA - CB ANGL. DEV. = -13.8 DEGREES REMARK 500 TYR A 216 CB - CG - CD2 ANGL. DEV. = 4.8 DEGREES REMARK 500 TYR A 216 CB - CG - CD1 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG A 220 NE - CZ - NH2 ANGL. DEV. = -6.3 DEGREES REMARK 500 VAL A 230 CG1 - CB - CG2 ANGL. DEV. = -13.9 DEGREES REMARK 500 TYR A 232 CB - CG - CD2 ANGL. DEV. = -4.8 DEGREES REMARK 500 TRP B 151 CD1 - CG - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 TRP B 151 CB - CG - CD1 ANGL. DEV. = -9.8 DEGREES REMARK 500 TRP B 151 CE2 - CD2 - CG ANGL. DEV. = -6.6 DEGREES REMARK 500 TRP B 151 CG - CD2 - CE3 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG B 158 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 158 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B 163 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 LEU B 166 CA - C - N ANGL. DEV. = -17.3 DEGREES REMARK 500 ARG B 208 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 208 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 LYS B 209 CA - CB - CG ANGL. DEV. = -13.9 DEGREES REMARK 500 ARG B 220 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 GLN B 222 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 196 -19.71 -49.88 REMARK 500 ASP A 238 47.65 36.71 REMARK 500 LYS B 198 -13.95 -140.36 REMARK 500 ASP B 238 46.95 38.02 REMARK 500 THR B 245 -80.95 -102.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACE C 100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACE D 100 DBREF 1A08 A 144 249 UNP P12931 SRC_HUMAN 143 248 DBREF 1A08 B 144 249 UNP P12931 SRC_HUMAN 143 248 DBREF 1A08 C 100 103 PDB 1A08 1A08 100 103 DBREF 1A08 D 100 103 PDB 1A08 1A08 100 103 SEQRES 1 A 107 MET ASP SER ILE GLN ALA GLU GLU TRP TYR PHE GLY LYS SEQRES 2 A 107 ILE THR ARG ARG GLU SER GLU ARG LEU LEU LEU ASN ALA SEQRES 3 A 107 GLU ASN PRO ARG GLY THR PHE LEU VAL ARG GLU SER GLU SEQRES 4 A 107 THR THR LYS GLY ALA TYR CYS LEU SER VAL SER ASP PHE SEQRES 5 A 107 ASP ASN ALA LYS GLY LEU ASN VAL LYS HIS TYR LYS ILE SEQRES 6 A 107 ARG LYS LEU ASP SER GLY GLY PHE TYR ILE THR SER ARG SEQRES 7 A 107 THR GLN PHE ASN SER LEU GLN GLN LEU VAL ALA TYR TYR SEQRES 8 A 107 SER LYS HIS ALA ASP GLY LEU CYS HIS ARG LEU THR THR SEQRES 9 A 107 VAL CYS PRO SEQRES 1 C 4 ACE FTY GLU DIP SEQRES 1 B 107 MET ASP SER ILE GLN ALA GLU GLU TRP TYR PHE GLY LYS SEQRES 2 B 107 ILE THR ARG ARG GLU SER GLU ARG LEU LEU LEU ASN ALA SEQRES 3 B 107 GLU ASN PRO ARG GLY THR PHE LEU VAL ARG GLU SER GLU SEQRES 4 B 107 THR THR LYS GLY ALA TYR CYS LEU SER VAL SER ASP PHE SEQRES 5 B 107 ASP ASN ALA LYS GLY LEU ASN VAL LYS HIS TYR LYS ILE SEQRES 6 B 107 ARG LYS LEU ASP SER GLY GLY PHE TYR ILE THR SER ARG SEQRES 7 B 107 THR GLN PHE ASN SER LEU GLN GLN LEU VAL ALA TYR TYR SEQRES 8 B 107 SER LYS HIS ALA ASP GLY LEU CYS HIS ARG LEU THR THR SEQRES 9 B 107 VAL CYS PRO SEQRES 1 D 4 ACE FTY GLU DIP MODRES 1A08 FTY C 101 TYR DEOXY-DIFLUOROMETHELENE-PHOSPHOTYROSINE MODRES 1A08 FTY D 101 TYR DEOXY-DIFLUOROMETHELENE-PHOSPHOTYROSINE HET ACE C 100 3 HET FTY C 101 19 HET DIP C 103 11 HET ACE D 100 3 HET FTY D 101 19 HET DIP D 103 11 HETNAM ACE ACETYL GROUP HETNAM FTY DEOXY-DIFLUOROMETHELENE-PHOSPHOTYROSINE HETNAM DIP DIPENTYLAMINE FORMUL 2 ACE 2(C2 H4 O) FORMUL 2 FTY 2(C10 H12 F2 N O5 P) FORMUL 2 DIP 2(C10 H23 N) FORMUL 5 HOH *27(H2 O) HELIX 1 1 ILE A 146 ALA A 148 5 3 HELIX 2 2 ARG A 158 LEU A 165 1 8 HELIX 3 3 LEU A 226 LYS A 235 1 10 HELIX 4 4 ARG B 158 LEU B 165 1 8 HELIX 5 5 LEU B 226 LYS B 235 1 10 SHEET 1 A 3 PHE A 175 GLU A 179 0 SHEET 2 A 3 TYR A 187 ASP A 195 -1 N SER A 190 O LEU A 176 SHEET 3 A 3 GLY A 199 ILE A 207 -1 N ILE A 207 O TYR A 187 SHEET 1 B 3 PHE B 175 GLU B 179 0 SHEET 2 B 3 TYR B 187 ASP B 195 -1 N SER B 190 O LEU B 176 SHEET 3 B 3 GLY B 199 ILE B 207 -1 N ILE B 207 O TYR B 187 LINK C ACE C 100 N FTY C 101 1555 1555 1.33 LINK C ACE C 100 H FTY C 101 1555 1555 1.28 LINK C FTY C 101 N GLU C 102 1555 1555 1.31 LINK C GLU C 102 N DIP C 103 1555 1555 1.39 LINK C ACE D 100 N FTY D 101 1555 1555 1.32 LINK C FTY D 101 N GLU D 102 1555 1555 1.32 LINK C GLU D 102 N DIP D 103 1555 1555 1.36 SITE 1 AC1 2 ARG A 158 HOH A 500 SITE 1 AC2 1 ARG B 158 CRYST1 51.900 67.400 75.200 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019268 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014837 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013298 0.00000 MTRIX1 1 -0.790400 0.308100 -0.529500 98.23500 1 MTRIX2 1 0.309900 0.946700 0.088300 -1.60050 1 MTRIX3 1 0.528500 -0.094300 -0.843700 33.18970 1 TER 1021 PRO A 249 HETATM 1022 C ACE C 100 41.333 7.641 24.671 1.00 15.78 C HETATM 1023 O ACE C 100 41.037 8.826 24.923 1.00 13.01 O HETATM 1024 CH3 ACE C 100 41.594 6.614 25.762 1.00 14.49 C HETATM 1025 N FTY C 101 41.611 7.121 23.475 1.00 15.39 N HETATM 1026 CA FTY C 101 41.464 7.847 22.229 1.00 17.53 C HETATM 1027 C FTY C 101 40.236 7.389 21.460 1.00 13.42 C HETATM 1028 O FTY C 101 39.705 6.296 21.676 1.00 15.15 O HETATM 1029 CB FTY C 101 42.750 7.655 21.404 1.00 14.75 C HETATM 1030 CG FTY C 101 43.984 8.051 22.201 1.00 16.46 C HETATM 1031 CD1 FTY C 101 44.709 7.145 23.007 1.00 15.97 C HETATM 1032 CD2 FTY C 101 44.387 9.344 22.114 1.00 13.64 C HETATM 1033 CE1 FTY C 101 45.831 7.536 23.722 1.00 9.09 C HETATM 1034 CE2 FTY C 101 45.494 9.732 22.814 1.00 12.50 C HETATM 1035 CZ FTY C 101 46.227 8.861 23.610 1.00 12.86 C HETATM 1036 C1 FTY C 101 47.487 9.435 24.298 1.00 13.10 C HETATM 1037 F1 FTY C 101 48.609 8.619 24.111 1.00 23.54 F HETATM 1038 F2 FTY C 101 47.894 10.498 23.471 1.00 17.92 F HETATM 1039 P FTY C 101 47.477 9.879 26.092 1.00 13.42 P HETATM 1040 O1P FTY C 101 48.770 10.543 26.256 1.00 14.86 O HETATM 1041 O2P FTY C 101 47.456 8.556 26.738 1.00 20.89 O HETATM 1042 O3P FTY C 101 46.249 10.728 26.234 1.00 9.97 O HETATM 1043 H FTY C 101 42.392 7.280 24.045 1.00 0.00 H HETATM 1054 N DIP C 103 38.340 6.458 17.692 1.00 18.28 N HETATM 1055 C1 DIP C 103 37.033 6.069 18.219 1.00 15.66 C HETATM 1056 C2 DIP C 103 37.368 5.029 19.296 1.00 19.55 C HETATM 1057 C3 DIP C 103 36.246 4.776 20.268 1.00 23.25 C HETATM 1058 C4 DIP C 103 35.122 3.940 19.713 1.00 27.12 C HETATM 1059 C5 DIP C 103 35.246 2.461 20.159 1.00 22.88 C HETATM 1060 C1' DIP C 103 38.684 5.969 16.367 1.00 16.57 C HETATM 1061 C2' DIP C 103 37.828 6.726 15.326 1.00 18.08 C HETATM 1062 C3' DIP C 103 38.326 8.208 15.121 1.00 14.71 C HETATM 1063 C4' DIP C 103 37.708 9.052 13.969 1.00 10.02 C HETATM 1064 C5' DIP C 103 38.580 10.312 13.774 1.00 5.73 C TER 1065 DIP C 103 TER 2078 PRO B 249 HETATM 2079 C ACE D 100 43.508 -8.044 38.237 1.00 22.40 C HETATM 2080 O ACE D 100 44.188 -7.028 38.375 1.00 24.12 O HETATM 2081 CH3 ACE D 100 43.835 -9.085 37.159 1.00 23.92 C HETATM 2082 N FTY D 101 42.358 -8.182 38.874 1.00 19.79 N HETATM 2083 CA FTY D 101 41.991 -7.330 39.951 1.00 21.63 C HETATM 2084 C FTY D 101 42.344 -8.115 41.169 1.00 21.96 C HETATM 2085 O FTY D 101 42.364 -9.363 41.151 1.00 23.77 O HETATM 2086 CB FTY D 101 40.525 -7.065 39.951 1.00 23.37 C HETATM 2087 CG FTY D 101 40.128 -6.287 38.724 1.00 21.34 C HETATM 2088 CD1 FTY D 101 39.424 -6.924 37.758 1.00 26.16 C HETATM 2089 CD2 FTY D 101 40.436 -4.960 38.566 1.00 27.63 C HETATM 2090 CE1 FTY D 101 39.018 -6.246 36.634 1.00 25.99 C HETATM 2091 CE2 FTY D 101 40.039 -4.248 37.440 1.00 28.06 C HETATM 2092 CZ FTY D 101 39.304 -4.902 36.467 1.00 29.73 C HETATM 2093 C1 FTY D 101 38.751 -4.151 35.249 1.00 30.20 C HETATM 2094 F1 FTY D 101 37.543 -4.788 34.908 1.00 34.90 F HETATM 2095 F2 FTY D 101 38.273 -2.921 35.715 1.00 30.48 F HETATM 2096 P FTY D 101 39.843 -4.003 33.734 1.00 35.31 P HETATM 2097 O1P FTY D 101 39.144 -2.942 32.961 1.00 37.51 O HETATM 2098 O2P FTY D 101 39.708 -5.378 33.208 1.00 37.96 O HETATM 2099 O3P FTY D 101 41.180 -3.625 34.322 1.00 33.08 O HETATM 2100 H FTY D 101 41.724 -8.352 38.146 1.00 0.00 H HETATM 2111 N DIP D 103 41.824 -9.035 45.336 1.00 21.24 N HETATM 2112 C1 DIP D 103 43.073 -9.662 45.671 1.00 16.83 C HETATM 2113 C2 DIP D 103 42.971 -10.911 44.839 1.00 26.75 C HETATM 2114 C3 DIP D 103 44.273 -11.654 44.996 1.00 24.64 C HETATM 2115 C4 DIP D 103 44.300 -12.427 43.705 1.00 30.98 C HETATM 2116 C5 DIP D 103 45.557 -13.307 43.584 1.00 34.30 C HETATM 2117 C1' DIP D 103 40.697 -9.317 46.214 1.00 19.49 C HETATM 2118 C2' DIP D 103 40.883 -8.519 47.493 1.00 11.44 C HETATM 2119 C3' DIP D 103 40.593 -7.040 47.441 1.00 17.17 C HETATM 2120 C4' DIP D 103 41.399 -6.569 48.623 1.00 13.40 C HETATM 2121 C5' DIP D 103 41.170 -5.082 48.852 1.00 12.55 C TER 2122 DIP D 103 HETATM 2123 O HOH A 500 39.285 10.554 23.845 1.00 14.72 O HETATM 2124 H1 HOH A 500 40.012 11.059 24.209 1.00 0.00 H HETATM 2125 H2 HOH A 500 38.696 11.213 23.477 1.00 0.00 H HETATM 2126 O HOH A 503 47.983 3.990 13.282 1.00 22.74 O HETATM 2127 H1 HOH A 503 48.362 4.641 12.692 1.00 0.00 H HETATM 2128 H2 HOH A 503 48.665 3.325 13.376 1.00 0.00 H HETATM 2129 O HOH A 506 44.607 12.493 9.286 1.00 11.62 O HETATM 2130 H1 HOH A 506 45.224 12.077 8.684 1.00 0.00 H HETATM 2131 H2 HOH A 506 45.022 12.416 10.145 1.00 0.00 H HETATM 2132 O HOH A 507 39.896 12.486 9.294 1.00 21.03 O HETATM 2133 H1 HOH A 507 39.015 12.795 9.503 1.00 0.00 H HETATM 2134 H2 HOH A 507 39.759 11.643 8.863 1.00 0.00 H HETATM 2135 O HOH A 508 48.211 29.698 23.798 1.00 32.66 O HETATM 2136 H1 HOH A 508 47.802 30.004 24.608 1.00 0.00 H HETATM 2137 H2 HOH A 508 47.905 28.796 23.701 1.00 0.00 H HETATM 2138 O HOH A 512 54.136 27.538 23.089 1.00 10.68 O HETATM 2139 H1 HOH A 512 54.624 27.044 22.431 1.00 0.00 H HETATM 2140 H2 HOH A 512 54.776 27.719 23.777 1.00 0.00 H HETATM 2141 O HOH A 513 58.603 19.898 24.594 1.00 57.09 O HETATM 2142 H1 HOH A 513 58.763 20.759 24.207 1.00 0.00 H HETATM 2143 H2 HOH A 513 58.976 19.957 25.474 1.00 0.00 H HETATM 2144 O HOH A 514 51.570 14.365 27.451 1.00 28.07 O HETATM 2145 H1 HOH A 514 51.652 14.115 26.531 1.00 0.00 H HETATM 2146 H2 HOH A 514 51.207 15.250 27.427 1.00 0.00 H HETATM 2147 O HOH A 515 46.273 18.808 36.934 1.00 23.49 O HETATM 2148 H1 HOH A 515 45.677 19.278 36.351 1.00 0.00 H HETATM 2149 H2 HOH A 515 47.147 19.035 36.616 1.00 0.00 H HETATM 2150 O HOH A 516 52.127 12.068 34.209 1.00 43.78 O HETATM 2151 H1 HOH A 516 51.230 12.298 34.452 1.00 0.00 H HETATM 2152 H2 HOH A 516 52.064 11.788 33.296 1.00 0.00 H HETATM 2153 O HOH A 518 39.899 13.472 6.831 1.00 15.45 O HETATM 2154 H1 HOH A 518 40.335 12.860 7.425 1.00 0.00 H HETATM 2155 H2 HOH A 518 40.531 13.613 6.126 1.00 0.00 H HETATM 2156 O HOH A 519 47.163 12.510 32.854 1.00 21.78 O HETATM 2157 H1 HOH A 519 47.806 12.638 33.551 1.00 0.00 H HETATM 2158 H2 HOH A 519 46.318 12.670 33.274 1.00 0.00 H HETATM 2159 O HOH A 521 48.809 25.717 12.114 1.00 31.68 O HETATM 2160 H1 HOH A 521 49.008 25.021 12.740 1.00 0.00 H HETATM 2161 H2 HOH A 521 48.646 25.259 11.289 1.00 0.00 H HETATM 2162 O HOH A 522 35.315 11.168 16.914 1.00 34.43 O HETATM 2163 H1 HOH A 522 35.759 11.698 17.576 1.00 0.00 H HETATM 2164 H2 HOH A 522 35.048 10.376 17.380 1.00 0.00 H HETATM 2165 O HOH A 525 46.480 8.695 6.145 1.00 20.36 O HETATM 2166 H1 HOH A 525 46.177 9.598 6.243 1.00 0.00 H HETATM 2167 H2 HOH A 525 45.956 8.197 6.772 1.00 0.00 H HETATM 2168 O HOH A 526 50.309 2.941 21.464 1.00 36.26 O HETATM 2169 H1 HOH A 526 50.210 2.048 21.134 1.00 0.00 H HETATM 2170 H2 HOH A 526 49.665 3.009 22.169 1.00 0.00 H HETATM 2171 O HOH C 501 43.201 8.006 17.627 1.00 11.71 O HETATM 2172 H1 HOH C 501 42.690 7.270 17.964 1.00 0.00 H HETATM 2173 H2 HOH C 501 44.109 7.706 17.668 1.00 0.00 H HETATM 2174 O HOH C 517 45.785 7.224 27.983 1.00 39.00 O HETATM 2175 H1 HOH C 517 45.701 6.337 27.633 1.00 0.00 H HETATM 2176 H2 HOH C 517 46.448 7.638 27.431 1.00 0.00 H HETATM 2177 O HOH C 524 43.006 3.450 23.416 1.00 34.59 O HETATM 2178 H1 HOH C 524 42.607 2.610 23.190 1.00 0.00 H HETATM 2179 H2 HOH C 524 42.387 4.104 23.092 1.00 0.00 H HETATM 2180 O HOH B 502 38.563 16.367 35.169 1.00 50.62 O HETATM 2181 H1 HOH B 502 39.119 17.024 34.749 1.00 0.00 H HETATM 2182 H2 HOH B 502 39.036 16.126 35.966 1.00 0.00 H HETATM 2183 O HOH B 504 52.487 -2.974 37.100 1.00 51.56 O HETATM 2184 H1 HOH B 504 53.251 -2.961 36.523 1.00 0.00 H HETATM 2185 H2 HOH B 504 52.852 -3.064 37.980 1.00 0.00 H HETATM 2186 O HOH B 509 28.754 -2.953 38.916 1.00 32.31 O HETATM 2187 H1 HOH B 509 28.279 -3.414 39.608 1.00 0.00 H HETATM 2188 H2 HOH B 509 29.373 -3.600 38.578 1.00 0.00 H HETATM 2189 O HOH B 510 34.578 -1.156 49.914 1.00 6.14 O HETATM 2190 H1 HOH B 510 35.463 -0.824 50.064 1.00 0.00 H HETATM 2191 H2 HOH B 510 34.588 -1.466 49.008 1.00 0.00 H HETATM 2192 O HOH B 511 37.950 -2.115 52.466 1.00 24.98 O HETATM 2193 H1 HOH B 511 37.141 -1.767 52.090 1.00 0.00 H HETATM 2194 H2 HOH B 511 38.648 -1.645 52.010 1.00 0.00 H HETATM 2195 O HOH B 520 52.891 9.445 36.413 1.00 34.12 O HETATM 2196 H1 HOH B 520 52.128 9.104 36.879 1.00 0.00 H HETATM 2197 H2 HOH B 520 52.766 9.161 35.508 1.00 0.00 H HETATM 2198 O HOH B 523 36.542 -0.943 54.660 1.00 5.59 O HETATM 2199 H1 HOH B 523 37.262 -1.536 54.874 1.00 0.00 H HETATM 2200 H2 HOH B 523 36.028 -1.416 54.006 1.00 0.00 H HETATM 2201 O HOH D 505 38.432 -6.237 42.892 1.00 23.38 O HETATM 2202 H1 HOH D 505 38.966 -7.031 42.909 1.00 0.00 H HETATM 2203 H2 HOH D 505 37.778 -6.402 42.213 1.00 0.00 H CONECT 1022 1023 1024 1025 1043 CONECT 1023 1022 CONECT 1024 1022 CONECT 1025 1022 1026 1043 CONECT 1026 1025 1027 1029 CONECT 1027 1026 1028 1044 CONECT 1028 1027 CONECT 1029 1026 1030 CONECT 1030 1029 1031 1032 CONECT 1031 1030 1033 CONECT 1032 1030 1034 CONECT 1033 1031 1035 CONECT 1034 1032 1035 CONECT 1035 1033 1034 1036 CONECT 1036 1035 1037 1038 1039 CONECT 1037 1036 CONECT 1038 1036 CONECT 1039 1036 1040 1041 1042 CONECT 1040 1039 CONECT 1041 1039 CONECT 1042 1039 CONECT 1043 1022 1025 CONECT 1044 1027 CONECT 1046 1054 CONECT 1054 1046 1055 1060 CONECT 1055 1054 1056 CONECT 1056 1055 1057 CONECT 1057 1056 1058 CONECT 1058 1057 1059 CONECT 1059 1058 CONECT 1060 1054 1061 CONECT 1061 1060 1062 CONECT 1062 1061 1063 CONECT 1063 1062 1064 CONECT 1064 1063 CONECT 2079 2080 2081 2082 CONECT 2080 2079 CONECT 2081 2079 CONECT 2082 2079 2083 2100 CONECT 2083 2082 2084 2086 CONECT 2084 2083 2085 2101 CONECT 2085 2084 CONECT 2086 2083 2087 CONECT 2087 2086 2088 2089 CONECT 2088 2087 2090 CONECT 2089 2087 2091 CONECT 2090 2088 2092 CONECT 2091 2089 2092 CONECT 2092 2090 2091 2093 CONECT 2093 2092 2094 2095 2096 CONECT 2094 2093 CONECT 2095 2093 CONECT 2096 2093 2097 2098 2099 CONECT 2097 2096 CONECT 2098 2096 CONECT 2099 2096 CONECT 2100 2082 CONECT 2101 2084 CONECT 2103 2111 CONECT 2111 2103 2112 2117 CONECT 2112 2111 2113 CONECT 2113 2112 2114 CONECT 2114 2113 2115 CONECT 2115 2114 2116 CONECT 2116 2115 CONECT 2117 2111 2118 CONECT 2118 2117 2119 CONECT 2119 2118 2120 CONECT 2120 2119 2121 CONECT 2121 2120 MASTER 348 0 6 5 6 0 2 9 1751 4 70 20 END