HEADER VIRAL PROTEIN 15-DEC-97 1A1R TITLE HCV NS3 PROTEASE DOMAIN:NS4A PEPTIDE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: NS3 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PROTEASE DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NS4A PROTEIN; COMPND 9 CHAIN: C, D; COMPND 10 FRAGMENT: ACTIVATION DOMAIN; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPATITIS C VIRUS; SOURCE 3 ORGANISM_TAXID: 11103; SOURCE 4 STRAIN: H; SOURCE 5 GENE: NS3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 9 EXPRESSION_SYSTEM_CELLULAR_LOCATION: CYTOPLASM; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-BS(+); SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HEPATITIS C VIRUS; SOURCE 13 ORGANISM_TAXID: 11103; SOURCE 14 STRAIN: H; SOURCE 15 GENE: NS3; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 19 EXPRESSION_SYSTEM_CELLULAR_LOCATION: CYTOPLASM; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET-BS(+) KEYWDS VIRAL PROTEIN, SERINE PROTEASE, NONSTRUCTURAL PROTEINS, COFACTOR KEYWDS 2 PEPTIDE, HELICASE EXPDTA X-RAY DIFFRACTION AUTHOR J.L.KIM,K.A.MORGENSTERN,C.LIN,T.FOX,M.D.DWYER,J.A.LANDRO, AUTHOR 2 S.P.CHAMBERS,W.MARKLAND,C.A.LEPRE,E.T.O'MALLEY,S.L.HARBESON, AUTHOR 3 C.M.RICE,M.A.MURCKO,P.R.CARON,J.A.THOMSON REVDAT 4 07-FEB-24 1A1R 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 1A1R 1 VERSN REVDAT 2 01-APR-03 1A1R 1 JRNL REVDAT 1 17-JUN-98 1A1R 0 JRNL AUTH J.L.KIM,K.A.MORGENSTERN,C.LIN,T.FOX,M.D.DWYER,J.A.LANDRO, JRNL AUTH 2 S.P.CHAMBERS,W.MARKLAND,C.A.LEPRE,E.T.O'MALLEY,S.L.HARBESON, JRNL AUTH 3 C.M.RICE,M.A.MURCKO,P.R.CARON,J.A.THOMSON JRNL TITL CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS NS3 PROTEASE JRNL TITL 2 DOMAIN COMPLEXED WITH A SYNTHETIC NS4A COFACTOR PEPTIDE. JRNL REF CELL(CAMBRIDGE,MASS.) V. 87 343 1996 JRNL REFN ISSN 0092-8674 JRNL PMID 8861917 JRNL DOI 10.1016/S0092-8674(00)81351-3 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.L.KIM,K.A.MORGENSTERN,C.LIN,T.FOX,M.D.DWYER,J.A.LANDRO, REMARK 1 AUTH 2 S.P.CHAMBERS,W.MARKLAND,C.A.LEPRE,E.T.O'MALLEY,S.L.HARBESON, REMARK 1 AUTH 3 C.M.RICE,M.A.MURCKO,P.R.CARON,J.A.THOMSON REMARK 1 TITL ERRATUM. CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS NS3 REMARK 1 TITL 2 PROTEASE DOMAIN COMPLEXED WITH A SYNTHETIC NS4A COFACTOR REMARK 1 TITL 3 PEPTIDE REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 89 159 1997 REMARK 1 REFN ISSN 0092-8674 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.6 REMARK 3 NUMBER OF REFLECTIONS : 21635 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1928 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.58 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1748 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE : 0.3600 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 171 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.028 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2683 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : 6.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.480 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.280 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.510 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.430 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.480 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.840 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : PARAM19.SOL REMARK 3 PARAMETER FILE 3 : PARMXRAY.XPL REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : MASS1.DAT REMARK 3 TOPOLOGY FILE 3 : TOPH19.SOL REMARK 3 TOPOLOGY FILE 4 : TOPH19.ION REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1A1R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000170285. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : JUL-96 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH2R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24236 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.35500 REMARK 200 R SYM FOR SHELL (I) : 0.35500 REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: PHASES, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM 1.8 M REMARK 280 NACL, 100 MM NA/K PHOSPHATE, 10 MM B-MERCAPTOETHANOL, 100 MM MES, REMARK 280 PH 6.5. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 112.50000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 64.95191 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 25.15000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 112.50000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 64.95191 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 25.15000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 112.50000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 64.95191 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 25.15000 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 112.50000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 64.95191 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 25.15000 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 112.50000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 64.95191 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 25.15000 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 112.50000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 64.95191 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 25.15000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 129.90381 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 50.30000 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 129.90381 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 50.30000 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 129.90381 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 50.30000 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 129.90381 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 50.30000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 129.90381 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 50.30000 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 129.90381 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 50.30000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -121.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 17 REMARK 465 SER A 18 REMARK 465 MET A 19 REMARK 465 THR A 20 REMARK 465 GLY A 21 REMARK 465 GLY A 22 REMARK 465 GLN A 23 REMARK 465 GLN A 24 REMARK 465 MET A 25 REMARK 465 GLY A 26 REMARK 465 ALA A 27 REMARK 465 PRO A 28 REMARK 465 ILE A 29 REMARK 465 THR A 30 REMARK 465 ALA A 31 REMARK 465 TYR A 32 REMARK 465 ALA A 33 REMARK 465 GLN A 34 REMARK 465 GLN A 35 REMARK 465 THR A 36 REMARK 465 ARG A 37 REMARK 465 GLY A 38 REMARK 465 LEU A 39 REMARK 465 LEU A 40 REMARK 465 GLY A 41 REMARK 465 CYS A 42 REMARK 465 ILE A 43 REMARK 465 ILE A 44 REMARK 465 THR A 45 REMARK 465 SER A 46 REMARK 465 LEU A 47 REMARK 465 THR A 48 REMARK 465 GLY A 49 REMARK 465 ARG A 50 REMARK 465 ASP A 51 REMARK 465 LYS A 52 REMARK 465 ASN A 53 REMARK 465 GLN A 54 REMARK 465 GLY A 207 REMARK 465 SER A 208 REMARK 465 HIS A 209 REMARK 465 HIS A 210 REMARK 465 HIS A 211 REMARK 465 HIS A 212 REMARK 465 HIS A 213 REMARK 465 HIS A 214 REMARK 465 ALA B 17 REMARK 465 SER B 18 REMARK 465 MET B 19 REMARK 465 THR B 20 REMARK 465 GLY B 21 REMARK 465 GLY B 22 REMARK 465 GLN B 23 REMARK 465 GLN B 24 REMARK 465 MET B 25 REMARK 465 GLY B 26 REMARK 465 ALA B 27 REMARK 465 GLY B 207 REMARK 465 SER B 208 REMARK 465 HIS B 209 REMARK 465 HIS B 210 REMARK 465 HIS B 211 REMARK 465 HIS B 212 REMARK 465 HIS B 213 REMARK 465 HIS B 214 REMARK 465 LYS C 19 REMARK 465 LYS C 20 REMARK 465 ILE C 37 REMARK 465 ILE C 38 REMARK 465 PRO C 39 REMARK 465 LYS C 40 REMARK 465 LYS C 41 REMARK 465 LYS D 19 REMARK 465 LYS D 41 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 162 CG CD CE NZ REMARK 470 THR A 173 OG1 CG2 REMARK 470 ARG A 206 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 54 CG CD OE1 NE2 REMARK 470 ASP B 147 CG OD1 OD2 REMARK 470 LYS B 162 CG CD CE NZ REMARK 470 THR B 173 OG1 CG2 REMARK 470 THR B 186 OG1 CG2 REMARK 470 LYS B 191 CG CD CE NZ REMARK 470 GLU B 199 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH21 ARG B 88 H2 HOH B 907 1.18 REMARK 500 HH21 ARG B 156 H1 HOH B 953 1.30 REMARK 500 HH21 ARG A 88 H1 HOH A 943 1.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 69 -156.01 -154.99 REMARK 500 HIS A 83 1.46 -69.49 REMARK 500 PRO A 93 4.52 -66.46 REMARK 500 PRO A 114 -175.52 -69.18 REMARK 500 THR A 186 -118.73 -93.16 REMARK 500 MET A 205 35.71 -81.04 REMARK 500 THR B 64 -165.99 -127.08 REMARK 500 ASN B 103 83.25 -156.14 REMARK 500 THR B 124 54.22 -141.11 REMARK 500 CYS B 125 -4.52 -145.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 123 SG REMARK 620 2 CYS A 125 SG 92.5 REMARK 620 3 CYS A 171 SG 101.5 118.3 REMARK 620 4 HOH A 921 O 108.4 112.4 118.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 902 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 123 SG REMARK 620 2 CYS B 125 SG 91.6 REMARK 620 3 CYS B 171 SG 98.4 112.8 REMARK 620 4 HOH B 912 O 115.9 120.3 113.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: ACTIVE SITE, MOLECULE A. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: ACTIVE SITE, MOLECULE B. REMARK 800 REMARK 800 SITE_IDENTIFIER: ZN1 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: ZINC BINDING SITE, MOLECULE A. REMARK 800 REMARK 800 SITE_IDENTIFIER: ZN2 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: ZINC BINDING SITE, MOLECULE B. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 902 DBREF 1A1R A 22 206 UNP P27958 POLG_HCVH 1026 1205 DBREF 1A1R B 22 206 UNP P27958 POLG_HCVH 1026 1205 DBREF 1A1R C 21 39 UNP P27958 POLG_HCVH 1677 1695 DBREF 1A1R D 21 39 UNP P27958 POLG_HCVH 1677 1695 SEQADV 1A1R GLN A 23 UNP P27958 TRP 1023 CONFLICT SEQADV 1A1R GLN A 24 UNP P27958 ARG 1024 CONFLICT SEQADV 1A1R MET A 25 UNP P27958 LEU 1025 CONFLICT SEQADV 1A1R GLY A 26 UNP P27958 LEU 1026 CONFLICT SEQADV 1A1R MET A 100 UNP P27958 THR 1100 VARIANT SEQADV 1A1R GLN B 23 UNP P27958 TRP 1023 CONFLICT SEQADV 1A1R GLN B 24 UNP P27958 ARG 1024 CONFLICT SEQADV 1A1R MET B 25 UNP P27958 LEU 1025 CONFLICT SEQADV 1A1R GLY B 26 UNP P27958 LEU 1026 CONFLICT SEQADV 1A1R MET B 100 UNP P27958 THR 1100 VARIANT SEQADV 1A1R SER C 22 UNP P27958 CYS 1679 VARIANT SEQADV 1A1R SER D 22 UNP P27958 CYS 1679 VARIANT SEQRES 1 A 198 ALA SER MET THR GLY GLY GLN GLN MET GLY ALA PRO ILE SEQRES 2 A 198 THR ALA TYR ALA GLN GLN THR ARG GLY LEU LEU GLY CYS SEQRES 3 A 198 ILE ILE THR SER LEU THR GLY ARG ASP LYS ASN GLN VAL SEQRES 4 A 198 GLU GLY GLU VAL GLN ILE VAL SER THR ALA THR GLN THR SEQRES 5 A 198 PHE LEU ALA THR CYS ILE ASN GLY VAL CYS TRP THR VAL SEQRES 6 A 198 TYR HIS GLY ALA GLY THR ARG THR ILE ALA SER PRO LYS SEQRES 7 A 198 GLY PRO VAL ILE GLN MET TYR THR ASN VAL ASP GLN ASP SEQRES 8 A 198 LEU VAL GLY TRP PRO ALA PRO GLN GLY SER ARG SER LEU SEQRES 9 A 198 THR PRO CYS THR CYS GLY SER SER ASP LEU TYR LEU VAL SEQRES 10 A 198 THR ARG HIS ALA ASP VAL ILE PRO VAL ARG ARG ARG GLY SEQRES 11 A 198 ASP SER ARG GLY SER LEU LEU SER PRO ARG PRO ILE SER SEQRES 12 A 198 TYR LEU LYS GLY SER SER GLY GLY PRO LEU LEU CYS PRO SEQRES 13 A 198 THR GLY HIS ALA VAL GLY LEU PHE ARG ALA ALA VAL CYS SEQRES 14 A 198 THR ARG GLY VAL ALA LYS ALA VAL ASP PHE ILE PRO VAL SEQRES 15 A 198 GLU ASN LEU GLU THR THR MET ARG GLY SER HIS HIS HIS SEQRES 16 A 198 HIS HIS HIS SEQRES 1 B 198 ALA SER MET THR GLY GLY GLN GLN MET GLY ALA PRO ILE SEQRES 2 B 198 THR ALA TYR ALA GLN GLN THR ARG GLY LEU LEU GLY CYS SEQRES 3 B 198 ILE ILE THR SER LEU THR GLY ARG ASP LYS ASN GLN VAL SEQRES 4 B 198 GLU GLY GLU VAL GLN ILE VAL SER THR ALA THR GLN THR SEQRES 5 B 198 PHE LEU ALA THR CYS ILE ASN GLY VAL CYS TRP THR VAL SEQRES 6 B 198 TYR HIS GLY ALA GLY THR ARG THR ILE ALA SER PRO LYS SEQRES 7 B 198 GLY PRO VAL ILE GLN MET TYR THR ASN VAL ASP GLN ASP SEQRES 8 B 198 LEU VAL GLY TRP PRO ALA PRO GLN GLY SER ARG SER LEU SEQRES 9 B 198 THR PRO CYS THR CYS GLY SER SER ASP LEU TYR LEU VAL SEQRES 10 B 198 THR ARG HIS ALA ASP VAL ILE PRO VAL ARG ARG ARG GLY SEQRES 11 B 198 ASP SER ARG GLY SER LEU LEU SER PRO ARG PRO ILE SER SEQRES 12 B 198 TYR LEU LYS GLY SER SER GLY GLY PRO LEU LEU CYS PRO SEQRES 13 B 198 THR GLY HIS ALA VAL GLY LEU PHE ARG ALA ALA VAL CYS SEQRES 14 B 198 THR ARG GLY VAL ALA LYS ALA VAL ASP PHE ILE PRO VAL SEQRES 15 B 198 GLU ASN LEU GLU THR THR MET ARG GLY SER HIS HIS HIS SEQRES 16 B 198 HIS HIS HIS SEQRES 1 C 23 LYS LYS GLY SER VAL VAL ILE VAL GLY ARG ILE VAL LEU SEQRES 2 C 23 SER GLY LYS PRO ALA ILE ILE PRO LYS LYS SEQRES 1 D 23 LYS LYS GLY SER VAL VAL ILE VAL GLY ARG ILE VAL LEU SEQRES 2 D 23 SER GLY LYS PRO ALA ILE ILE PRO LYS LYS HET ZN A 901 1 HET ZN B 902 1 HETNAM ZN ZINC ION FORMUL 5 ZN 2(ZN 2+) FORMUL 7 HOH *130(H2 O) HELIX 1 1 TYR A 82 ALA A 85 1 4 HELIX 2 2 ILE A 158 LEU A 161 1 4 HELIX 3 3 VAL A 198 THR A 204 1 7 HELIX 4 4 LEU B 39 THR B 48 1 10 HELIX 5 5 TYR B 82 ALA B 85 1 4 HELIX 6 6 ILE B 158 LEU B 161 1 4 HELIX 7 7 VAL B 198 THR B 204 1 7 SHEET 1 A 5 VAL A 59 SER A 63 0 SHEET 2 A 5 THR A 68 ILE A 74 -1 N ALA A 71 O GLN A 60 SHEET 3 A 5 VAL A 77 VAL A 81 -1 N TRP A 79 O THR A 72 SHEET 4 A 5 LEU A 108 PRO A 112 -1 N TRP A 111 O CYS A 78 SHEET 5 A 5 TYR A 101 ASN A 103 -1 N ASN A 103 O LEU A 108 SHEET 1 B 6 ASP A 129 VAL A 133 0 SHEET 2 B 6 VAL A 139 GLY A 146 -1 N VAL A 142 O LEU A 130 SHEET 3 B 6 ARG A 149 LEU A 152 -1 N SER A 151 O ARG A 143 SHEET 4 B 6 ALA A 192 PRO A 197 -1 N VAL A 193 O GLY A 150 SHEET 5 B 6 ALA A 176 VAL A 184 -1 N VAL A 184 O ALA A 192 SHEET 6 B 6 PRO A 168 LEU A 170 -1 N LEU A 169 O VAL A 177 SHEET 1 C 5 VAL B 59 SER B 63 0 SHEET 2 C 5 THR B 68 ILE B 74 -1 N ALA B 71 O GLN B 60 SHEET 3 C 5 VAL B 77 VAL B 81 -1 N TRP B 79 O THR B 72 SHEET 4 C 5 LEU B 108 PRO B 112 -1 N TRP B 111 O CYS B 78 SHEET 5 C 5 TYR B 101 ASN B 103 -1 N ASN B 103 O LEU B 108 SHEET 1 D 2 ILE B 90 SER B 92 0 SHEET 2 D 2 GLY B 95 VAL B 97 -1 N VAL B 97 O ILE B 90 SHEET 1 E 7 VAL B 139 ARG B 143 0 SHEET 2 E 7 ASP B 129 VAL B 133 -1 N LEU B 132 O ILE B 140 SHEET 3 E 7 PRO B 168 CYS B 171 -1 N LEU B 170 O TYR B 131 SHEET 4 E 7 ALA B 176 VAL B 184 -1 N GLY B 178 O LEU B 169 SHEET 5 E 7 ALA B 192 PRO B 197 -1 N ILE B 196 O LEU B 179 SHEET 6 E 7 ARG B 149 LEU B 152 -1 N GLY B 150 O VAL B 193 SHEET 7 E 7 VAL B 142 ARG B 144 -1 N ARG B 143 O SER B 151 LINK SG CYS A 123 ZN ZN A 901 1555 1555 2.29 LINK SG CYS A 125 ZN ZN A 901 1555 1555 2.30 LINK SG CYS A 171 ZN ZN A 901 1555 1555 2.28 LINK ZN ZN A 901 O HOH A 921 1555 1555 2.32 LINK SG CYS B 123 ZN ZN B 902 1555 1555 2.19 LINK SG CYS B 125 ZN ZN B 902 1555 1555 2.36 LINK SG CYS B 171 ZN ZN B 902 1555 1555 2.46 LINK ZN ZN B 902 O HOH B 912 1555 1555 2.33 SITE 1 AC1 3 THR A 87 ASP A 107 SER A 165 SITE 1 AC2 3 THR B 87 ASP B 107 SER B 165 SITE 1 ZN1 4 ZN A 901 CYS A 123 CYS A 125 CYS A 171 SITE 1 ZN2 4 ZN B 902 CYS B 123 CYS B 125 CYS B 171 SITE 1 AC3 4 CYS A 123 CYS A 125 CYS A 171 HOH A 921 SITE 1 AC4 5 CYS B 123 THR B 124 CYS B 125 CYS B 171 SITE 2 AC4 5 HOH B 912 CRYST1 225.000 225.000 75.450 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004444 0.002566 0.000000 0.00000 SCALE2 0.000000 0.005132 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013254 0.00000