data_1A83 # _entry.id 1A83 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1A83 pdb_00001a83 10.2210/pdb1a83/pdb WWPDB D_1000170510 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1A83 _pdbx_database_status.recvd_initial_deposition_date 1998-04-01 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Han, X.' 1 'Leroy, J.L.' 2 'Gueron, M.' 3 # _citation.id primary _citation.title 'An intramolecular i-motif: the solution structure and base-pair opening kinetics of d(5mCCT3CCT3ACCT3CC).' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 278 _citation.page_first 949 _citation.page_last 965 _citation.year 1998 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9600855 _citation.pdbx_database_id_DOI 10.1006/jmbi.1998.1740 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Han, X.' 1 ? primary 'Leroy, J.L.' 2 ? primary 'Gueron, M.' 3 ? # _cell.entry_id 1A83 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A83 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-(MCY)CTTTCCTTTACCTTTCC-3') ; _entity.formula_weight 5253.485 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ;THE INTRAMOLECULAR FOLDING OF THIS I-MOTIF MAY RELATED TO THE CYTOSINE-RICH STRANDS OF TELOMERES AND HUMAN CENTROMERE. THE FIRST CYTOSINE IS C5-METHYLATED AND IS NAMED MCY IN THIS ENTRY. ; # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(MCY)(DC)(DT)(DT)(DT)(DC)(DC)(DT)(DT)(DT)(DA)(DC)(DC)(DT)(DT)(DT)(DC)(DC)' _entity_poly.pdbx_seq_one_letter_code_can CCTTTCCTTTACCTTTCC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MCY n 1 2 DC n 1 3 DT n 1 4 DT n 1 5 DT n 1 6 DC n 1 7 DC n 1 8 DT n 1 9 DT n 1 10 DT n 1 11 DA n 1 12 DC n 1 13 DC n 1 14 DT n 1 15 DT n 1 16 DT n 1 17 DC n 1 18 DC n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1A83 _struct_ref.pdbx_db_accession 1A83 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1A83 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 18 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1A83 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 18 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 MCY 'DNA linking' n "5-METHYL-2'-DEOXYCYTIDINE" ? 'C10 H15 N3 O4' 241.244 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 NOESY 1 2 1 TOCSY 1 3 1 HETERO-TOCSY 1 # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 270 ? 4.8 ? . K 2 270 ? 7.0 ? . K # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AMX600 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 # _pdbx_nmr_refine.entry_id 1A83 _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1A83 _pdbx_nmr_ensemble.conformers_calculated_total_number 60 _pdbx_nmr_ensemble.conformers_submitted_total_number 6 _pdbx_nmr_ensemble.conformer_selection_criteria 'LEAST ENERGY OF NOE VIOLATION' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR 3.0 BRUNGER 1 'structure solution' Felix ? ? 2 # _exptl.entry_id 1A83 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1A83 _struct.title 'INTRAMOLECULAR I-MOTIF, NMR, 6 STRUCTURES' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1A83 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DEOXYRIBONUCLEIC ACID, DNA, I-MOTIF, SOLUTION STRUCTURE, TELOMERE, CENTROMERE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MCY 1 "O3'" ? ? ? 1_555 A DC 2 P ? ? A MCY 1 A DC 2 1_555 ? ? ? ? ? ? ? 1.613 ? ? hydrog1 hydrog ? ? A MCY 1 N3 ? ? ? 1_555 A DC 12 N4 ? ? A MCY 1 A DC 12 1_555 ? ? ? ? ? ? TYPE_14_PAIR ? ? ? hydrog2 hydrog ? ? A MCY 1 N4 ? ? ? 1_555 A DC 12 N3 ? ? A MCY 1 A DC 12 1_555 ? ? ? ? ? ? TYPE_14_PAIR ? ? ? hydrog3 hydrog ? ? A MCY 1 N4 ? ? ? 1_555 A DC 17 O2 ? ? A MCY 1 A DC 17 1_555 ? ? ? ? ? ? 'MCY-DC MISPAIR' ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DC 13 N4 ? ? A DC 2 A DC 13 1_555 ? ? ? ? ? ? TYPE_14_PAIR ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DC 13 N3 ? ? A DC 2 A DC 13 1_555 ? ? ? ? ? ? TYPE_14_PAIR ? ? ? hydrog6 hydrog ? ? A DT 5 O4 ? ? ? 1_555 A DC 13 N4 ? ? A DT 5 A DC 13 1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ? ? ? hydrog7 hydrog ? ? A DT 5 N3 ? ? ? 1_555 A DT 16 O4 ? ? A DT 5 A DT 16 1_555 ? ? ? ? ? ? TYPE_12_PAIR ? ? ? hydrog8 hydrog ? ? A DT 5 O4 ? ? ? 1_555 A DT 16 N3 ? ? A DT 5 A DT 16 1_555 ? ? ? ? ? ? TYPE_12_PAIR ? ? ? hydrog9 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DC 17 N4 ? ? A DC 6 A DC 17 1_555 ? ? ? ? ? ? TYPE_14_PAIR ? ? ? hydrog10 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DC 17 N3 ? ? A DC 6 A DC 17 1_555 ? ? ? ? ? ? TYPE_14_PAIR ? ? ? hydrog11 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DC 18 N4 ? ? A DC 7 A DC 18 1_555 ? ? ? ? ? ? TYPE_14_PAIR ? ? ? hydrog12 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DC 18 N3 ? ? A DC 7 A DC 18 1_555 ? ? ? ? ? ? TYPE_14_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _database_PDB_matrix.entry_id 1A83 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1A83 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MCY 1 1 1 MCY MCY A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DC 6 6 6 DC C A . n A 1 7 DC 7 7 7 DC C A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DT 9 9 9 DT T A . n A 1 10 DT 10 10 10 DT T A . n A 1 11 DA 11 11 11 DA A A . n A 1 12 DC 12 12 12 DC C A . n A 1 13 DC 13 13 13 DC C A . n A 1 14 DT 14 14 14 DT T A . n A 1 15 DT 15 15 15 DT T A . n A 1 16 DT 16 16 16 DT T A . n A 1 17 DC 17 17 17 DC C A . n A 1 18 DC 18 18 18 DC C A . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MCY _pdbx_struct_mod_residue.label_seq_id 1 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MCY _pdbx_struct_mod_residue.auth_seq_id 1 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DC _pdbx_struct_mod_residue.details "5-METHYL-2'-DEOXYCYTIDINE" # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-06-17 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_nmr_software 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_pdbx_nmr_software.name' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.0 ? 1 X-PLOR refinement 3.0 ? 2 X-PLOR phasing 3.0 ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 H41 A DC 2 ? ? O2 A DC 13 ? ? 1.57 2 2 N4 A DC 2 ? ? O2 A DC 13 ? ? 2.14 3 3 H41 A DC 2 ? ? O2 A DC 13 ? ? 1.54 4 3 N4 A DC 2 ? ? O2 A DC 13 ? ? 2.14 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 2 _pdbx_validate_rmsd_bond.auth_atom_id_1 C5 _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 DT _pdbx_validate_rmsd_bond.auth_seq_id_1 10 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 C7 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 10 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.532 _pdbx_validate_rmsd_bond.bond_target_value 1.496 _pdbx_validate_rmsd_bond.bond_deviation 0.036 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 110.49 108.30 2.19 0.30 N 2 1 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 111.11 108.30 2.81 0.30 N 3 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.98 108.30 2.68 0.30 N 4 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.03 108.30 2.73 0.30 N 5 1 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.81 108.30 2.51 0.30 N 6 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.76 108.30 3.46 0.30 N 7 1 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.56 108.30 2.26 0.30 N 8 1 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.69 108.30 2.39 0.30 N 9 1 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 110.96 108.30 2.66 0.30 N 10 1 N7 A DA 11 ? ? C8 A DA 11 ? ? N9 A DA 11 ? ? 117.72 113.80 3.92 0.50 N 11 1 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 111.07 108.30 2.77 0.30 N 12 1 C2 A DC 12 ? ? N3 A DC 12 ? ? C4 A DC 12 ? ? 123.11 119.90 3.21 0.50 N 13 1 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 110.66 108.30 2.36 0.30 N 14 1 C2 A DC 13 ? ? N3 A DC 13 ? ? C4 A DC 13 ? ? 123.22 119.90 3.32 0.50 N 15 1 N1 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 122.68 118.90 3.78 0.60 N 16 1 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 111.00 108.30 2.70 0.30 N 17 1 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 110.92 108.30 2.62 0.30 N 18 1 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 110.97 108.30 2.67 0.30 N 19 1 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 110.85 108.30 2.55 0.30 N 20 1 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 110.32 108.30 2.02 0.30 N 21 2 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.90 108.30 2.60 0.30 N 22 2 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.00 108.30 2.70 0.30 N 23 2 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.77 108.30 2.47 0.30 N 24 2 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.66 108.30 3.36 0.30 N 25 2 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 110.68 108.30 2.38 0.30 N 26 2 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.09 108.30 2.79 0.30 N 27 2 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.54 108.30 2.24 0.30 N 28 2 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.48 108.30 2.18 0.30 N 29 2 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 110.59 108.30 2.29 0.30 N 30 2 N7 A DA 11 ? ? C8 A DA 11 ? ? N9 A DA 11 ? ? 117.90 113.80 4.10 0.50 N 31 2 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 111.12 108.30 2.82 0.30 N 32 2 C2 A DC 12 ? ? N3 A DC 12 ? ? C4 A DC 12 ? ? 123.02 119.90 3.12 0.50 N 33 2 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 110.32 108.30 2.02 0.30 N 34 2 C2 A DC 13 ? ? N3 A DC 13 ? ? C4 A DC 13 ? ? 124.14 119.90 4.24 0.50 N 35 2 N1 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 122.72 118.90 3.82 0.60 N 36 2 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 112.29 108.30 3.99 0.30 N 37 2 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 110.94 108.30 2.64 0.30 N 38 2 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.00 108.30 2.70 0.30 N 39 2 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 111.08 108.30 2.78 0.30 N 40 2 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 110.59 108.30 2.29 0.30 N 41 3 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 110.24 108.30 1.94 0.30 N 42 3 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 111.53 108.30 3.23 0.30 N 43 3 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.63 108.30 2.33 0.30 N 44 3 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.96 108.30 2.66 0.30 N 45 3 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.00 108.30 2.70 0.30 N 46 3 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 110.41 108.30 2.11 0.30 N 47 3 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.76 108.30 3.46 0.30 N 48 3 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.25 122.90 -3.65 0.60 N 49 3 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.48 108.30 2.18 0.30 N 50 3 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.55 108.30 2.25 0.30 N 51 3 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 110.83 108.30 2.53 0.30 N 52 3 N7 A DA 11 ? ? C8 A DA 11 ? ? N9 A DA 11 ? ? 117.86 113.80 4.06 0.50 N 53 3 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 111.15 108.30 2.85 0.30 N 54 3 C2 A DC 12 ? ? N3 A DC 12 ? ? C4 A DC 12 ? ? 123.80 119.90 3.90 0.50 N 55 3 N1 A DC 12 ? ? C2 A DC 12 ? ? O2 A DC 12 ? ? 123.01 118.90 4.11 0.60 N 56 3 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 110.38 108.30 2.08 0.30 N 57 3 N1 A DC 13 ? ? C2 A DC 13 ? ? N3 A DC 13 ? ? 114.92 119.20 -4.28 0.70 N 58 3 C2 A DC 13 ? ? N3 A DC 13 ? ? C4 A DC 13 ? ? 124.16 119.90 4.26 0.50 N 59 3 N1 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 122.89 118.90 3.99 0.60 N 60 3 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 110.97 108.30 2.67 0.30 N 61 3 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 110.84 108.30 2.54 0.30 N 62 3 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.01 108.30 2.71 0.30 N 63 3 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 110.85 108.30 2.55 0.30 N 64 3 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 110.41 108.30 2.11 0.30 N 65 4 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 110.23 108.30 1.93 0.30 N 66 4 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 111.61 108.30 3.31 0.30 N 67 4 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.87 108.30 2.57 0.30 N 68 4 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.14 108.30 2.84 0.30 N 69 4 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.85 108.30 2.55 0.30 N 70 4 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 110.52 108.30 2.22 0.30 N 71 4 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.25 108.30 2.95 0.30 N 72 4 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.63 108.30 2.33 0.30 N 73 4 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.82 108.30 2.52 0.30 N 74 4 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 110.72 108.30 2.42 0.30 N 75 4 N7 A DA 11 ? ? C8 A DA 11 ? ? N9 A DA 11 ? ? 117.72 113.80 3.92 0.50 N 76 4 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 111.16 108.30 2.86 0.30 N 77 4 C2 A DC 12 ? ? N3 A DC 12 ? ? C4 A DC 12 ? ? 123.68 119.90 3.78 0.50 N 78 4 N1 A DC 12 ? ? C2 A DC 12 ? ? O2 A DC 12 ? ? 122.89 118.90 3.99 0.60 N 79 4 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 110.66 108.30 2.36 0.30 N 80 4 C2 A DC 13 ? ? N3 A DC 13 ? ? C4 A DC 13 ? ? 123.20 119.90 3.30 0.50 N 81 4 N1 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 122.60 118.90 3.70 0.60 N 82 4 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 110.87 108.30 2.57 0.30 N 83 4 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 112.27 108.30 3.97 0.30 N 84 4 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.22 108.30 2.92 0.30 N 85 4 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 110.68 108.30 2.38 0.30 N 86 4 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 110.46 108.30 2.16 0.30 N 87 5 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 110.26 108.30 1.96 0.30 N 88 5 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 112.41 108.30 4.11 0.30 N 89 5 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.16 108.30 2.86 0.30 N 90 5 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.67 108.30 2.37 0.30 N 91 5 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.01 108.30 2.71 0.30 N 92 5 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 110.41 108.30 2.11 0.30 N 93 5 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.39 108.30 3.09 0.30 N 94 5 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.49 108.30 2.19 0.30 N 95 5 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.35 108.30 2.05 0.30 N 96 5 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 111.00 108.30 2.70 0.30 N 97 5 N7 A DA 11 ? ? C8 A DA 11 ? ? N9 A DA 11 ? ? 117.72 113.80 3.92 0.50 N 98 5 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 111.18 108.30 2.88 0.30 N 99 5 C2 A DC 12 ? ? N3 A DC 12 ? ? C4 A DC 12 ? ? 123.68 119.90 3.78 0.50 N 100 5 N1 A DC 12 ? ? C2 A DC 12 ? ? O2 A DC 12 ? ? 123.13 118.90 4.23 0.60 N 101 5 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 110.77 108.30 2.47 0.30 N 102 5 C2 A DC 13 ? ? N3 A DC 13 ? ? C4 A DC 13 ? ? 123.24 119.90 3.34 0.50 N 103 5 N1 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 122.78 118.90 3.88 0.60 N 104 5 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 110.79 108.30 2.49 0.30 N 105 5 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 111.03 108.30 2.73 0.30 N 106 5 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 110.96 108.30 2.66 0.30 N 107 5 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 111.16 108.30 2.86 0.30 N 108 5 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 110.56 108.30 2.26 0.30 N 109 6 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 110.93 108.30 2.63 0.30 N 110 6 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.91 108.30 2.61 0.30 N 111 6 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.00 108.30 2.70 0.30 N 112 6 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.63 108.30 2.33 0.30 N 113 6 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.10 108.30 2.80 0.30 N 114 6 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 110.35 108.30 2.05 0.30 N 115 6 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.55 108.30 3.25 0.30 N 116 6 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.49 108.30 2.19 0.30 N 117 6 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.71 108.30 2.41 0.30 N 118 6 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 110.79 108.30 2.49 0.30 N 119 6 N7 A DA 11 ? ? C8 A DA 11 ? ? N9 A DA 11 ? ? 117.79 113.80 3.99 0.50 N 120 6 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 111.14 108.30 2.84 0.30 N 121 6 C2 A DC 12 ? ? N3 A DC 12 ? ? C4 A DC 12 ? ? 123.71 119.90 3.81 0.50 N 122 6 N1 A DC 12 ? ? C2 A DC 12 ? ? O2 A DC 12 ? ? 122.87 118.90 3.97 0.60 N 123 6 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 110.34 108.30 2.04 0.30 N 124 6 C2 A DC 13 ? ? N3 A DC 13 ? ? C4 A DC 13 ? ? 124.02 119.90 4.12 0.50 N 125 6 N1 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 123.35 118.90 4.45 0.60 N 126 6 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 110.92 108.30 2.62 0.30 N 127 6 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 110.70 108.30 2.40 0.30 N 128 6 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 110.81 108.30 2.51 0.30 N 129 6 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 110.99 108.30 2.69 0.30 N 130 6 C2 A DC 17 ? ? N3 A DC 17 ? ? C4 A DC 17 ? ? 122.95 119.90 3.05 0.50 N 131 6 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 110.42 108.30 2.12 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 2 DC A 2 ? ? 0.082 'SIDE CHAIN' 2 3 DC A 2 ? ? 0.073 'SIDE CHAIN' 3 5 DC A 2 ? ? 0.062 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1A83 'double helix' 1A83 'parallel strands' 1A83 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 5 1_555 A DT 16 1_555 -2.049 2.191 0.463 43.080 10.456 -165.512 1 A_DT5:DT16_A A 5 ? A 16 ? 12 2 1 A DC 2 1_555 A DC 13 1_555 -2.088 -0.547 -0.194 -34.212 -18.246 -176.443 2 A_DC2:DC13_A A 2 ? A 13 ? 14 2 1 A DC 6 1_555 A DC 17 1_555 2.060 0.789 -0.210 -15.103 -3.729 175.431 3 A_DC6:DC17_A A 6 ? A 17 ? 14 2 1 A MCY 1 1_555 A DC 12 1_555 2.020 0.382 -0.130 1.927 -6.724 178.377 4 A_MCY1:DC12_A A 1 ? A 12 ? 14 2 1 A DC 7 1_555 A DC 18 1_555 2.071 0.868 -0.379 -7.791 6.867 173.817 5 A_DC7:DC18_A A 7 ? A 18 ? 14 2 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 5 1_555 A DT 16 1_555 A DC 2 1_555 A DC 13 1_555 -2.634 1.414 -0.874 96.918 138.785 36.333 1.150 1.015 -0.604 72.414 -50.569 169.812 1 AA_DT5DC2:DC13DT16_AA A 5 ? A 16 ? A 2 ? A 13 ? 1 A DC 2 1_555 A DC 13 1_555 A DC 6 1_555 A DC 17 1_555 -2.096 -1.921 -0.555 108.956 -132.622 149.468 -1.015 1.004 -0.495 -66.424 -54.571 177.800 2 AA_DC2DC6:DC17DC13_AA A 2 ? A 13 ? A 6 ? A 17 ? 1 A DC 6 1_555 A DC 17 1_555 A MCY 1 1_555 A DC 12 1_555 -1.020 2.780 0.006 119.778 131.993 158.637 1.381 0.519 0.261 66.008 -59.899 179.673 3 AA_DC6MCY1:DC12DC17_AA A 6 ? A 17 ? A 1 ? A 12 ? 1 A MCY 1 1_555 A DC 12 1_555 A DC 7 1_555 A DC 18 1_555 -2.319 1.905 -0.167 -145.301 -97.434 -93.236 -1.051 -1.014 -0.715 49.101 -73.224 -176.529 4 AA_MCY1DC7:DC18DC12_AA A 1 ? A 12 ? A 7 ? A 18 ? #