HEADER VIRAL PROTEIN 06-APR-92 1AAF TITLE NUCLEOCAPSID ZINC FINGERS DETECTED IN RETROVIRUSES: EXAFS STUDIES ON TITLE 2 INTACT VIRUSES AND THE SOLUTION-STATE STRUCTURE OF THE NUCLEOCAPSID TITLE 3 PROTEIN FROM HIV-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIV-1 NUCLEOCAPSID PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11696; SOURCE 4 STRAIN: M/B_MN; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS VIRAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.F.SUMMERS,L.E.HENDERSON,M.R.CHANCE,J.W.BESS JUNIOR,T.L.SOUTH, AUTHOR 2 P.R.BLAKE,I.SAGI,G.PEREZ-ALVARADO,R.C.SOWDER,D.R.HARE,L.O.ARTHUR REVDAT 5 10-APR-24 1AAF 1 REMARK LINK REVDAT 4 24-NOV-10 1AAF 1 SOURCE REVDAT 3 24-FEB-09 1AAF 1 VERSN REVDAT 2 01-APR-03 1AAF 1 JRNL REVDAT 1 31-JAN-94 1AAF 0 JRNL AUTH M.F.SUMMERS,L.E.HENDERSON,M.R.CHANCE,J.W.BESS JR.,T.L.SOUTH, JRNL AUTH 2 P.R.BLAKE,I.SAGI,G.PEREZ-ALVARADO,R.C.SOWDER 3RD.,D.R.HARE, JRNL AUTH 3 L.O.ARTHUR JRNL TITL NUCLEOCAPSID ZINC FINGERS DETECTED IN RETROVIRUSES: EXAFS JRNL TITL 2 STUDIES OF INTACT VIRUSES AND THE SOLUTION-STATE STRUCTURE JRNL TITL 3 OF THE NUCLEOCAPSID PROTEIN FROM HIV-1. JRNL REF PROTEIN SCI. V. 1 563 1992 JRNL REFN ISSN 0961-8368 JRNL PMID 1304355 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1AAF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000170590. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 56 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 15 SG REMARK 620 2 CYS A 18 SG 106.7 REMARK 620 3 HIS A 23 NE2 93.4 94.3 REMARK 620 4 CYS A 28 SG 115.6 124.3 116.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 57 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 36 SG REMARK 620 2 CYS A 39 SG 106.9 REMARK 620 3 HIS A 44 NE2 93.7 93.6 REMARK 620 4 CYS A 49 SG 109.4 142.4 93.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 56 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 57 DBREF 1AAF A 1 55 UNP P05961 POL_HV1MN 380 434 SEQRES 1 A 55 MET GLN ARG GLY ASN PHE ARG ASN GLN ARG LYS ILE ILE SEQRES 2 A 55 LYS CYS PHE ASN CYS GLY LYS GLU GLY HIS ILE ALA LYS SEQRES 3 A 55 ASN CYS ARG ALA PRO ARG LYS ARG GLY CYS TRP LYS CYS SEQRES 4 A 55 GLY LYS GLU GLY HIS GLN MET LYS ASP CYS THR GLU ARG SEQRES 5 A 55 GLN ALA ASN HET ZN A 56 1 HET ZN A 57 1 HETNAM ZN ZINC ION FORMUL 2 ZN 2(ZN 2+) HELIX 1 1 ILE A 24 CYS A 28 5 5 HELIX 2 2 GLN A 45 CYS A 49 5 5 LINK SG CYS A 15 ZN ZN A 56 1555 1555 2.31 LINK SG CYS A 18 ZN ZN A 56 1555 1555 2.30 LINK NE2 HIS A 23 ZN ZN A 56 1555 1555 2.01 LINK SG CYS A 28 ZN ZN A 56 1555 1555 2.30 LINK SG CYS A 36 ZN ZN A 57 1555 1555 2.30 LINK SG CYS A 39 ZN ZN A 57 1555 1555 2.30 LINK NE2 HIS A 44 ZN ZN A 57 1555 1555 2.01 LINK SG CYS A 49 ZN ZN A 57 1555 1555 2.30 SITE 1 AC1 4 CYS A 15 CYS A 18 HIS A 23 CYS A 28 SITE 1 AC2 4 CYS A 36 CYS A 39 HIS A 44 CYS A 49 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1