HEADER OXIDOREDUCTASE(NAD(A)-CHOH(D)) 18-OCT-93 1ADF TITLE CRYSTALLOGRAPHIC STUDIES OF TWO ALCOHOL DEHYDROGENASE-BOUND ANALOGS OF TITLE 2 THIAZOLE-4-CARBOXAMIDE ADENINE DINUCLEOTIDE (TAD), THE ACTIVE TITLE 3 ANABOLITE OF THE ANTITUMOR AGENT TIAZOFURIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALCOHOL DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.1.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; SOURCE 3 ORGANISM_COMMON: HORSE; SOURCE 4 ORGANISM_TAXID: 9796 KEYWDS OXIDOREDUCTASE(NAD(A)-CHOH(D)) EXPDTA X-RAY DIFFRACTION AUTHOR H.LI,W.A.HALLOWS,J.S.PUNZI,V.E.MARQUEZ,H.L.CARRELL,K.W.PANKIEWICZ, AUTHOR 2 K.A.WATANABE,B.M.GOLDSTEIN REVDAT 5 07-FEB-24 1ADF 1 REMARK LINK REVDAT 4 29-NOV-17 1ADF 1 HELIX REVDAT 3 24-FEB-09 1ADF 1 VERSN REVDAT 2 01-APR-03 1ADF 1 JRNL REVDAT 1 31-JAN-94 1ADF 0 JRNL AUTH H.LI,W.H.HALLOWS,J.S.PUNZI,V.E.MARQUEZ,H.L.CARRELL, JRNL AUTH 2 K.W.PANKIEWICZ,K.A.WATANABE,B.M.GOLDSTEIN JRNL TITL CRYSTALLOGRAPHIC STUDIES OF TWO ALCOHOL DEHYDROGENASE-BOUND JRNL TITL 2 ANALOGUES OF THIAZOLE-4-CARBOXAMIDE ADENINE DINUCLEOTIDE JRNL TITL 3 (TAD), THE ACTIVE ANABOLITE OF THE ANTITUMOR AGENT JRNL TITL 4 TIAZOFURIN. JRNL REF BIOCHEMISTRY V. 33 23 1994 JRNL REFN ISSN 0006-2960 JRNL PMID 8286346 JRNL DOI 10.1021/BI00167A004 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH F.COLONNA-CESARI,D.PERAHIA,M.KARPLUS,H.EKLUND,C.I.BRANDEN, REMARK 1 AUTH 2 O.TAPIA REMARK 1 TITL INTERDOMAIN MOTION IN LIVER ALCOHOL DEHYDROGENASE. REMARK 1 TITL 2 STRUCTURAL AND ENERGETIC ANALYSIS OF THE HINGE BENDING MODE REMARK 1 REF J.BIOL.CHEM. V. 261 15273 1986 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 2 REMARK 1 AUTH H.EKLUND,J.-P.SAMAMA,T.A.JONES REMARK 1 TITL CRYSTALLOGRAPHIC INVESTIGATIONS OF NICOTINAMIDE ADENINE REMARK 1 TITL 2 DINUCLEOTIDE BINDING TO HORSE LIVER ALCOHOL DEHYDROGENASE REMARK 1 REF BIOCHEMISTRY V. 23 5982 1984 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 3 REMARK 1 AUTH H.EKLUND,J.-P.SAMAMA,L.WALLEN REMARK 1 TITL PYRAZOLE BINDING IN CRYSTALLINE BINARY AND TERNARY COMPLEXES REMARK 1 TITL 2 WITH LIVER ALCOHOL DEHYDROGENASE REMARK 1 REF BIOCHEMISTRY V. 21 4858 1982 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 4 REMARK 1 AUTH E.CEDERGREN-ZEPPEZAUER,J.-P.SAMAMA,H.EKLUND REMARK 1 TITL CRYSTAL STRUCTURE DETERMINATIONS OF COENZYME ANALOGUE AND REMARK 1 TITL 2 SUBSTRATE COMPLEXES OF LIVER ALCOHOL DEHYDROGENASE. BINDING REMARK 1 TITL 3 OF 1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE AND REMARK 1 TITL 4 TRANS-4-(N,N-DIMETHYLAMINO)CINNAMALDEHYDE TO THE ENZYME REMARK 1 REF BIOCHEMISTRY V. 21 4895 1982 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 5 REMARK 1 AUTH H.EKLUND,B.V.PLAPP,J.-P.SAMAMA,C.-I.BRANDEN REMARK 1 TITL BINDING OF SUBSTRATE IN A TERNARY COMPLEX OF HORSE LIVER REMARK 1 TITL 2 ALCOHOL DEHYDROGENASE REMARK 1 REF J.BIOL.CHEM. V. 257 14349 1982 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 6 REMARK 1 AUTH H.EKLUND,B.NORDSTROM,E.ZEPPEZAUER,G.SODERLUND,I.OHLSSON, REMARK 1 AUTH 2 T.BOIWE,B.-O.SODERBERG,O.TAPIA,C.-I.BRANDEN,A.AKESON REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF HORSE LIVER ALCOHOL REMARK 1 TITL 2 DEHYDROGENASE AT 2.4 ANGSTROMS RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 102 27 1976 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 7 REMARK 1 AUTH H.JORNVALL,H.EKLUND,C.-I.BRANDEN REMARK 1 TITL SUBUNIT CONFORMATION OF YEAST ALCOHOL DEHYDROGENASE REMARK 1 REF J.BIOL.CHEM. V. 253 8414 1978 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 8 REMARK 1 AUTH J.-P.SAMAMA,E.ZEPPEZAUER,J.-F.BIELLMANN,C.-I.BRANDEN REMARK 1 TITL THE CRYSTAL STRUCTURE OF COMPLEXES BETWEEN HORSE LIVER REMARK 1 TITL 2 ALCOHOL DEHYDROGENASE AND THE COENZYME ANALOGUES REMARK 1 TITL 3 3-IODOPYRIDINE-ADENINE DINUCLEOTIDE AND PYRIDINE-ADENINE REMARK 1 TITL 4 DINUCLEOTIDE REMARK 1 REF EUR.J.BIOCHEM. V. 81 403 1977 REMARK 1 REFN ISSN 0014-2956 REMARK 1 REFERENCE 9 REMARK 1 AUTH T.BOIWE,C.-I.BRANDEN REMARK 1 TITL X-RAY INVESTIGATION OF THE BINDING OF 1,10-PHENANTHROLINE REMARK 1 TITL 2 AND IMIDAZOLE TO HORSE-LIVER ALCOHOL DEHYDROGENASE REMARK 1 REF EUR.J.BIOCHEM. V. 77 173 1977 REMARK 1 REFN ISSN 0014-2956 REMARK 1 REFERENCE 10 REMARK 1 AUTH C.-I.BRANDEN,H.JORNVALL,H.EKLUND,B.FURUGREN REMARK 1 TITL ALCOHOL DEHYDROGENASES REMARK 1 EDIT P.D.BOYER REMARK 1 REF THE ENZYMES,THIRD EDITION V. 11 103 1975 REMARK 1 PUBL ACADEMIC PRESS,N.Y. REMARK 1 REFN REMARK 1 REFERENCE 11 REMARK 1 AUTH I.OHLSSON,B.NORDSTROM,C.-I.BRANDEN REMARK 1 TITL STRUCTURAL AND FUNCTIONAL SIMILARITIES WITHIN THE COENZYME REMARK 1 TITL 2 BINDING DOMAINS OF DEHYDROGENASES REMARK 1 REF J.MOL.BIOL. V. 89 339 1974 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 12 REMARK 1 AUTH R.EINARSSON,H.EKLUND,E.ZEPPEZAUER,T.BOIWE,C.-I.BRANDEN REMARK 1 TITL BINDING OF SALICYLATE IN THE ADENOSINE-BINDING POCKET OF REMARK 1 TITL 2 DEHYDROGENASES REMARK 1 REF EUR.J.BIOCHEM. V. 49 41 1974 REMARK 1 REFN ISSN 0014-2956 REMARK 1 REFERENCE 13 REMARK 1 AUTH M.A.ABDALLAH,J.-F.BIELLMANN,B.NORDSTROM,C.-I.BRANDEN REMARK 1 TITL THE CONFORMATION OF ADENOSINE DIPHOSPHORIBOSE AND REMARK 1 TITL 2 8-BROMOADENOSINE DIPHOSPHORIBOSE WHEN BOUND TO LIVER ALCOHOL REMARK 1 TITL 3 DEHYDROGENASE REMARK 1 REF EUR.J.BIOCHEM. V. 50 475 1975 REMARK 1 REFN ISSN 0014-2956 REMARK 1 REFERENCE 14 REMARK 1 EDIT M.O.DAYHOFF REMARK 1 REF ATLAS OF PROTEIN SEQUENCE V. 5 145 1972 REMARK 1 REF 2 AND STRUCTURE (DATA SECTION) REMARK 1 PUBL NATIONAL BIOMEDICAL RESEARCH FOUNDATION, SILVER SPRING,MD. REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2785 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 34 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.017 REMARK 3 BOND ANGLES (DEGREES) : 3.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.200 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ADF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000170681. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.85000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 90.85000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 28.15000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.70000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 28.15000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.70000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 90.85000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 28.15000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.70000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 90.85000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 28.15000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.70000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 90.85000 REMARK 400 REMARK 400 COMPOUND REMARK 400 RESIDUE HIS 51 HAS ITS IMIDAZOLE RING ROTATED 180 DEGREES AROUND REMARK 400 ITS TWO-FOLD AXIS FROM THAT IN THE 8ADH STRUCTURE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 34 NE2 HIS A 34 CD2 -0.067 REMARK 500 HIS A 105 NE2 HIS A 105 CD2 -0.078 REMARK 500 HIS A 139 NE2 HIS A 139 CD2 -0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 1 N - CA - C ANGL. DEV. = -18.1 DEGREES REMARK 500 TRP A 15 CD1 - CG - CD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 TRP A 15 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG A 37 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 37 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 CYS A 46 CA - CB - SG ANGL. DEV. = 7.6 DEGREES REMARK 500 ARG A 47 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 47 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 GLU A 78 CA - CB - CG ANGL. DEV. = 15.8 DEGREES REMARK 500 VAL A 80 CA - C - N ANGL. DEV. = -15.3 DEGREES REMARK 500 ARG A 120 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 120 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 133 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 218 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 218 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 VAL A 235 N - CA - CB ANGL. DEV. = -14.0 DEGREES REMARK 500 ASP A 263 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 GLY A 270 O - C - N ANGL. DEV. = -9.8 DEGREES REMARK 500 MET A 303 CG - SD - CE ANGL. DEV. = -11.7 DEGREES REMARK 500 MET A 306 CA - CB - CG ANGL. DEV. = -11.9 DEGREES REMARK 500 MET A 306 CG - SD - CE ANGL. DEV. = -9.8 DEGREES REMARK 500 TRP A 314 CD1 - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP A 314 CE2 - CD2 - CG ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG A 363 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 363 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG A 369 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 369 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 2 -49.86 14.84 REMARK 500 ALA A 3 106.92 -41.72 REMARK 500 ALA A 65 -150.21 -80.39 REMARK 500 HIS A 67 -14.69 -150.08 REMARK 500 GLU A 74 -79.92 -95.66 REMARK 500 CYS A 97 -1.85 -57.66 REMARK 500 PRO A 106 3.92 -55.72 REMARK 500 LEU A 112 10.06 -60.76 REMARK 500 THR A 143 -53.86 -122.73 REMARK 500 PHE A 146 44.35 -84.76 REMARK 500 PRO A 165 92.57 -64.99 REMARK 500 CYS A 174 -69.01 -171.83 REMARK 500 VAL A 186 -71.26 -79.20 REMARK 500 PRO A 249 158.98 -40.81 REMARK 500 TYR A 286 23.18 -150.63 REMARK 500 LYS A 339 -69.31 -93.52 REMARK 500 LYS A 354 35.85 -81.07 REMARK 500 SER A 367 117.51 -172.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 376 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 46 SG REMARK 620 2 HIS A 67 NE2 105.8 REMARK 620 3 CYS A 174 SG 130.9 97.8 REMARK 620 4 HOH A 379 O 126.2 92.1 94.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 377 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 97 SG REMARK 620 2 CYS A 100 SG 110.7 REMARK 620 3 CYS A 103 SG 106.8 112.2 REMARK 620 4 CYS A 111 SG 94.4 114.7 116.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 376 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 377 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TAD A 378 DBREF 1ADF A 1 374 UNP P00327 ADHE_HORSE 1 374 SEQRES 1 A 374 SER THR ALA GLY LYS VAL ILE LYS CYS LYS ALA ALA VAL SEQRES 2 A 374 LEU TRP GLU GLU LYS LYS PRO PHE SER ILE GLU GLU VAL SEQRES 3 A 374 GLU VAL ALA PRO PRO LYS ALA HIS GLU VAL ARG ILE LYS SEQRES 4 A 374 MET VAL ALA THR GLY ILE CYS ARG SER ASP ASP HIS VAL SEQRES 5 A 374 VAL SER GLY THR LEU VAL THR PRO LEU PRO VAL ILE ALA SEQRES 6 A 374 GLY HIS GLU ALA ALA GLY ILE VAL GLU SER ILE GLY GLU SEQRES 7 A 374 GLY VAL THR THR VAL ARG PRO GLY ASP LYS VAL ILE PRO SEQRES 8 A 374 LEU PHE THR PRO GLN CYS GLY LYS CYS ARG VAL CYS LYS SEQRES 9 A 374 HIS PRO GLU GLY ASN PHE CYS LEU LYS ASN ASP LEU SER SEQRES 10 A 374 MET PRO ARG GLY THR MET GLN ASP GLY THR SER ARG PHE SEQRES 11 A 374 THR CYS ARG GLY LYS PRO ILE HIS HIS PHE LEU GLY THR SEQRES 12 A 374 SER THR PHE SER GLN TYR THR VAL VAL ASP GLU ILE SER SEQRES 13 A 374 VAL ALA LYS ILE ASP ALA ALA SER PRO LEU GLU LYS VAL SEQRES 14 A 374 CYS LEU ILE GLY CYS GLY PHE SER THR GLY TYR GLY SER SEQRES 15 A 374 ALA VAL LYS VAL ALA LYS VAL THR GLN GLY SER THR CYS SEQRES 16 A 374 ALA VAL PHE GLY LEU GLY GLY VAL GLY LEU SER VAL ILE SEQRES 17 A 374 MET GLY CYS LYS ALA ALA GLY ALA ALA ARG ILE ILE GLY SEQRES 18 A 374 VAL ASP ILE ASN LYS ASP LYS PHE ALA LYS ALA LYS GLU SEQRES 19 A 374 VAL GLY ALA THR GLU CYS VAL ASN PRO GLN ASP TYR LYS SEQRES 20 A 374 LYS PRO ILE GLN GLU VAL LEU THR GLU MET SER ASN GLY SEQRES 21 A 374 GLY VAL ASP PHE SER PHE GLU VAL ILE GLY ARG LEU ASP SEQRES 22 A 374 THR MET VAL THR ALA LEU SER CYS CYS GLN GLU ALA TYR SEQRES 23 A 374 GLY VAL SER VAL ILE VAL GLY VAL PRO PRO ASP SER GLN SEQRES 24 A 374 ASN LEU SER MET ASN PRO MET LEU LEU LEU SER GLY ARG SEQRES 25 A 374 THR TRP LYS GLY ALA ILE PHE GLY GLY PHE LYS SER LYS SEQRES 26 A 374 ASP SER VAL PRO LYS LEU VAL ALA ASP PHE MET ALA LYS SEQRES 27 A 374 LYS PHE ALA LEU ASP PRO LEU ILE THR HIS VAL LEU PRO SEQRES 28 A 374 PHE GLU LYS ILE ASN GLU GLY PHE ASP LEU LEU ARG SER SEQRES 29 A 374 GLY GLU SER ILE ARG THR ILE LEU THR PHE HET ZN A 376 1 HET ZN A 377 1 HET TAD A 378 51 HETNAM ZN ZINC ION HETNAM TAD BETA-METHYLENE-THIAZOLE-4-CARBOXYAMIDE-ADENINE HETNAM 2 TAD DINUCLEOTIDE FORMUL 2 ZN 2(ZN 2+) FORMUL 4 TAD C20 H27 N7 O13 P2 S FORMUL 5 HOH *34(H2 O) HELIX 1 H1 CYS A 46 THR A 56 1 11 HELIX 2 H12 CYS A 100 HIS A 105 1 6 HELIX 3 H2 PRO A 165 CYS A 174 1CONTIGUOUS WITH HELIX HA 10 HELIX 4 HA CYS A 174 VAL A 189 1CONTIGUOUS WITH HELIX H2 16 HELIX 5 HB GLY A 201 ALA A 216 1 16 HELIX 6 HC ASN A 225 GLY A 236 1 12 HELIX 7 HCD PRO A 249 GLY A 260 1 12 HELIX 8 HE ARG A 271 CYS A 281 1 11 HELIX 9 HS ASN A 304 GLY A 311 53/10 HELIX 8 HELIX 10 H3 LYS A 323 LYS A 339 1 17 HELIX 11 H34 LEU A 342 ILE A 346 1 5 HELIX 12 H4 LYS A 354 SER A 364 1 11 SHEET 1 A 4 ILE A 7 VAL A 13 0 SHEET 2 A 4 SER A 22 VAL A 28 -1 O SER A 22 N VAL A 13 SHEET 3 A 4 PHE A 130 CYS A 132 -1 O THR A 131 N GLU A 27 SHEET 4 A 4 LYS A 135 PRO A 136 -1 O LYS A 135 N CYS A 132 SHEET 1 B 5 VAL A 157 LYS A 159 0 SHEET 2 B 5 LYS A 88 PRO A 91 -1 O ILE A 90 N ALA A 158 SHEET 3 B 5 ALA A 69 ILE A 76 -1 N GLY A 71 O VAL A 89 SHEET 4 B 5 GLU A 35 GLY A 44 -1 N ARG A 37 O SER A 75 SHEET 5 B 5 TYR A 149 ASP A 153 -1 O THR A 150 N ILE A 38 SHEET 1 C 6 VAL A 157 LYS A 159 0 SHEET 2 C 6 LYS A 88 PRO A 91 -1 O ILE A 90 N ALA A 158 SHEET 3 C 6 ALA A 69 ILE A 76 -1 N GLY A 71 O VAL A 89 SHEET 4 C 6 GLU A 35 GLY A 44 -1 N ARG A 37 O SER A 75 SHEET 5 C 6 ARG A 369 THR A 373 -1 N LEU A 372 O THR A 43 SHEET 6 C 6 ILE A 346 PRO A 351 1 N THR A 347 O ARG A 369 SHEET 1 D 6 GLU A 239 VAL A 241 0 SHEET 2 D 6 ARG A 218 VAL A 222 1 O ILE A 219 N GLU A 239 SHEET 3 D 6 THR A 194 PHE A 198 1 N CYS A 195 O ARG A 218 SHEET 4 D 6 PHE A 264 GLU A 267 1 O PHE A 264 N ALA A 196 SHEET 5 D 6 VAL A 288 ILE A 291 1 O VAL A 288 N SER A 265 SHEET 6 D 6 THR A 313 GLY A 316 1 O THR A 313 N SER A 289 LINK SG CYS A 46 ZN ZN A 376 1555 1555 2.13 LINK NE2 HIS A 67 ZN ZN A 376 1555 1555 2.06 LINK SG CYS A 97 ZN ZN A 377 1555 1555 2.06 LINK SG CYS A 100 ZN ZN A 377 1555 1555 2.21 LINK SG CYS A 103 ZN ZN A 377 1555 1555 2.20 LINK SG CYS A 111 ZN ZN A 377 1555 1555 2.37 LINK SG CYS A 174 ZN ZN A 376 1555 1555 2.23 LINK ZN ZN A 376 O HOH A 379 1555 1555 1.61 CISPEP 1 LEU A 61 PRO A 62 0 -0.68 SITE 1 AC1 5 CYS A 46 SER A 48 HIS A 67 CYS A 174 SITE 2 AC1 5 HOH A 379 SITE 1 AC2 4 CYS A 97 CYS A 100 CYS A 103 CYS A 111 SITE 1 AC3 17 ARG A 47 HIS A 51 GLY A 199 LEU A 200 SITE 2 AC3 17 GLY A 201 GLY A 202 VAL A 203 ASP A 223 SITE 3 AC3 17 ILE A 224 LYS A 228 VAL A 268 ILE A 269 SITE 4 AC3 17 ARG A 271 GLY A 293 VAL A 294 PRO A 295 SITE 5 AC3 17 HOH A 386 CRYST1 56.300 75.400 181.700 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017762 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013263 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005504 0.00000