data_1AFL # _entry.id 1AFL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1AFL WWPDB D_1000170755 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1AFL _pdbx_database_status.recvd_initial_deposition_date 1997-03-08 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Leonidas, D.D.' 1 'Acharya, K.R.' 2 # _citation.id primary _citation.title ;Crystal structures of ribonuclease A complexes with 5'-diphosphoadenosine 3'-phosphate and 5'-diphosphoadenosine 2'-phosphate at 1.7 A resolution. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 36 _citation.page_first 5578 _citation.page_last 5588 _citation.year 1997 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9154942 _citation.pdbx_database_id_DOI 10.1021/bi9700330 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Leonidas, D.D.' 1 primary 'Shapiro, R.' 2 primary 'Irons, L.I.' 3 primary 'Russo, N.' 4 primary 'Acharya, K.R.' 5 # _cell.entry_id 1AFL _cell.length_a 101.930 _cell.length_b 33.440 _cell.length_c 73.690 _cell.angle_alpha 90.00 _cell.angle_beta 90.08 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AFL _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'RIBONUCLEASE A' 13708.326 2 3.1.27.5 ? ? ? 2 non-polymer syn "2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE" 507.181 2 ? ? ? ? 3 non-polymer syn 'CITRIC ACID' 192.124 2 ? ? ? ? 4 water nat water 18.015 122 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV ; _entity_poly.pdbx_seq_one_letter_code_can ;KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 GLU n 1 3 THR n 1 4 ALA n 1 5 ALA n 1 6 ALA n 1 7 LYS n 1 8 PHE n 1 9 GLU n 1 10 ARG n 1 11 GLN n 1 12 HIS n 1 13 MET n 1 14 ASP n 1 15 SER n 1 16 SER n 1 17 THR n 1 18 SER n 1 19 ALA n 1 20 ALA n 1 21 SER n 1 22 SER n 1 23 SER n 1 24 ASN n 1 25 TYR n 1 26 CYS n 1 27 ASN n 1 28 GLN n 1 29 MET n 1 30 MET n 1 31 LYS n 1 32 SER n 1 33 ARG n 1 34 ASN n 1 35 LEU n 1 36 THR n 1 37 LYS n 1 38 ASP n 1 39 ARG n 1 40 CYS n 1 41 LYS n 1 42 PRO n 1 43 VAL n 1 44 ASN n 1 45 THR n 1 46 PHE n 1 47 VAL n 1 48 HIS n 1 49 GLU n 1 50 SER n 1 51 LEU n 1 52 ALA n 1 53 ASP n 1 54 VAL n 1 55 GLN n 1 56 ALA n 1 57 VAL n 1 58 CYS n 1 59 SER n 1 60 GLN n 1 61 LYS n 1 62 ASN n 1 63 VAL n 1 64 ALA n 1 65 CYS n 1 66 LYS n 1 67 ASN n 1 68 GLY n 1 69 GLN n 1 70 THR n 1 71 ASN n 1 72 CYS n 1 73 TYR n 1 74 GLN n 1 75 SER n 1 76 TYR n 1 77 SER n 1 78 THR n 1 79 MET n 1 80 SER n 1 81 ILE n 1 82 THR n 1 83 ASP n 1 84 CYS n 1 85 ARG n 1 86 GLU n 1 87 THR n 1 88 GLY n 1 89 SER n 1 90 SER n 1 91 LYS n 1 92 TYR n 1 93 PRO n 1 94 ASN n 1 95 CYS n 1 96 ALA n 1 97 TYR n 1 98 LYS n 1 99 THR n 1 100 THR n 1 101 GLN n 1 102 ALA n 1 103 ASN n 1 104 LYS n 1 105 HIS n 1 106 ILE n 1 107 ILE n 1 108 VAL n 1 109 ALA n 1 110 CYS n 1 111 GLU n 1 112 GLY n 1 113 ASN n 1 114 PRO n 1 115 TYR n 1 116 VAL n 1 117 PRO n 1 118 VAL n 1 119 HIS n 1 120 PHE n 1 121 ASP n 1 122 ALA n 1 123 SER n 1 124 VAL n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name cattle _entity_src_nat.pdbx_organism_scientific 'Bos taurus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9913 _entity_src_nat.genus Bos _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ PANCREAS _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RNAS1_BOVIN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P61823 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MALKSLVLLSLLVLVLLLVRVQPSLGKETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADV QAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1AFL A 1 ? 124 ? P61823 27 ? 150 ? 1 124 2 1 1AFL B 1 ? 124 ? P61823 27 ? 150 ? 1 124 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 ATR non-polymer . "2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1AFL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.2 _exptl_crystal.density_percent_sol 48. _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;PROTEIN WAS CRYSTALLIZED FROM 10% PEG 4000, 10 MM SODIUM CITRATE, PH 5.5 AND THEN SOAKED WITH 10 MM 5-DIPHOSPHOADENOSINE 2'- PHOSPHATE FOR 3 HRS AT 16 C, temperature 289K ; # _diffrn.id 1 _diffrn.ambient_temp 289 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1995-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.87 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX9.6' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX9.6 _diffrn_source.pdbx_wavelength 0.87 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1AFL _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 1.7 _reflns.number_obs 25897 _reflns.number_all ? _reflns.percent_possible_obs 93.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.09 _reflns.pdbx_netI_over_sigmaI 9.9 _reflns.B_iso_Wilson_estimate 18.9 _reflns.pdbx_redundancy 3.4 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.7 _reflns_shell.d_res_low 1.8 _reflns_shell.percent_possible_all 89.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.112 _reflns_shell.meanI_over_sigI_obs 8.8 _reflns_shell.pdbx_redundancy 2.0 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1AFL _refine.ls_number_reflns_obs 25600 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 10000000.00 _refine.pdbx_data_cutoff_low_absF 0.00100 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 1.7 _refine.ls_percent_reflns_obs 93.0 _refine.ls_R_factor_obs 0.217 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.217 _refine.ls_R_factor_R_free 0.278 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 1235 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 23.5 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1AFL _refine_analyze.Luzzati_coordinate_error_obs 0.23 _refine_analyze.Luzzati_sigma_a_obs 0.11 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.23 _refine_analyze.Luzzati_sigma_a_free 0.15 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1901 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 88 _refine_hist.number_atoms_solvent 122 _refine_hist.number_atoms_total 2111 _refine_hist.d_res_high 1.7 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 25.1 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.32 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.47 1.50 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.50 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 2.57 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 4.14 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.70 _refine_ls_shell.d_res_low 1.81 _refine_ls_shell.number_reflns_R_work 3822 _refine_ls_shell.R_factor_R_work 0.231 _refine_ls_shell.percent_reflns_obs 87.5 _refine_ls_shell.R_factor_R_free 0.298 _refine_ls_shell.R_factor_R_free_error 0.024 _refine_ls_shell.percent_reflns_R_free 4.3 _refine_ls_shell.number_reflns_R_free 172 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 ? ? 'X-RAY DIFFRACTION' # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] -0.574800 _struct_ncs_oper.matrix[1][2] -0.817200 _struct_ncs_oper.matrix[1][3] 0.041900 _struct_ncs_oper.matrix[2][1] 0.783700 _struct_ncs_oper.matrix[2][2] -0.564600 _struct_ncs_oper.matrix[2][3] -0.259000 _struct_ncs_oper.matrix[3][1] 0.235300 _struct_ncs_oper.matrix[3][2] -0.116000 _struct_ncs_oper.matrix[3][3] 0.965000 _struct_ncs_oper.vector[1] 27.31890 _struct_ncs_oper.vector[2] -17.85790 _struct_ncs_oper.vector[3] -28.39480 # _struct.entry_id 1AFL _struct.title ;RIBONUCLEASE A IN COMPLEX WITH 5'-DIPHOSPHOADENOSINE 2'-PHOSPHATE AT 1.7 ANGSTROM RESOLUTION ; _struct.pdbx_descriptor ;RIBONUCLEASE A, 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE, CITRIC ACID ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1AFL _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'HYDROLASE, RIBONUCLEASE, ENDONUCLEASE, NUCLEOTIDE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? # loop_ _struct_biol.id 1 2 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 4 ? HIS A 12 ? ALA A 4 HIS A 12 1 ? 9 HELX_P HELX_P2 2 TYR A 25 ? SER A 32 ? TYR A 25 SER A 32 1 ? 8 HELX_P HELX_P3 3 LEU A 51 ? SER A 59 ? LEU A 51 SER A 59 1 ? 9 HELX_P HELX_P4 4 ALA B 4 ? HIS B 12 ? ALA B 4 HIS B 12 1 ? 9 HELX_P HELX_P5 5 TYR B 25 ? SER B 32 ? TYR B 25 SER B 32 1 ? 8 HELX_P HELX_P6 6 LEU B 51 ? SER B 59 ? LEU B 51 SER B 59 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 84 SG ? ? A CYS 26 A CYS 84 1_555 ? ? ? ? ? ? ? 2.027 ? disulf2 disulf ? ? A CYS 40 SG ? ? ? 1_555 A CYS 95 SG ? ? A CYS 40 A CYS 95 1_555 ? ? ? ? ? ? ? 2.025 ? disulf3 disulf ? ? A CYS 58 SG ? ? ? 1_555 A CYS 110 SG ? ? A CYS 58 A CYS 110 1_555 ? ? ? ? ? ? ? 2.025 ? disulf4 disulf ? ? A CYS 65 SG ? ? ? 1_555 A CYS 72 SG ? ? A CYS 65 A CYS 72 1_555 ? ? ? ? ? ? ? 2.029 ? disulf5 disulf ? ? B CYS 26 SG ? ? ? 1_555 B CYS 84 SG ? ? B CYS 26 B CYS 84 1_555 ? ? ? ? ? ? ? 2.037 ? disulf6 disulf ? ? B CYS 40 SG ? ? ? 1_555 B CYS 95 SG ? ? B CYS 40 B CYS 95 1_555 ? ? ? ? ? ? ? 2.028 ? disulf7 disulf ? ? B CYS 58 SG ? ? ? 1_555 B CYS 110 SG ? ? B CYS 58 B CYS 110 1_555 ? ? ? ? ? ? ? 2.030 ? disulf8 disulf ? ? B CYS 65 SG ? ? ? 1_555 B CYS 72 SG ? ? B CYS 65 B CYS 72 1_555 ? ? ? ? ? ? ? 2.020 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 92 A . ? TYR 92 A PRO 93 A ? PRO 93 A 1 0.02 2 ASN 113 A . ? ASN 113 A PRO 114 A ? PRO 114 A 1 0.49 3 TYR 92 B . ? TYR 92 B PRO 93 B ? PRO 93 B 1 0.02 4 ASN 113 B . ? ASN 113 B PRO 114 B ? PRO 114 B 1 -0.02 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? C ? 3 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 43 ? VAL A 47 ? VAL A 43 VAL A 47 A 2 MET A 79 ? GLU A 86 ? MET A 79 GLU A 86 A 3 TYR A 97 ? LYS A 104 ? TYR A 97 LYS A 104 B 1 LYS A 61 ? VAL A 63 ? LYS A 61 VAL A 63 B 2 CYS A 72 ? GLN A 74 ? CYS A 72 GLN A 74 B 3 HIS A 105 ? ALA A 109 ? HIS A 105 ALA A 109 B 4 HIS A 119 ? VAL A 124 ? HIS A 119 VAL A 124 C 1 VAL B 43 ? VAL B 47 ? VAL B 43 VAL B 47 C 2 MET B 79 ? GLU B 86 ? MET B 79 GLU B 86 C 3 TYR B 97 ? LYS B 104 ? TYR B 97 LYS B 104 D 1 LYS B 61 ? VAL B 63 ? LYS B 61 VAL B 63 D 2 CYS B 72 ? GLN B 74 ? CYS B 72 GLN B 74 D 3 HIS B 105 ? ALA B 109 ? HIS B 105 ALA B 109 D 4 HIS B 119 ? VAL B 124 ? HIS B 119 VAL B 124 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASN A 44 ? O ASN A 44 N CYS A 84 ? N CYS A 84 A 2 3 O MET A 79 ? O MET A 79 N LYS A 104 ? N LYS A 104 B 1 2 O LYS A 61 ? O LYS A 61 N GLN A 74 ? N GLN A 74 B 2 3 O TYR A 73 ? O TYR A 73 N VAL A 108 ? N VAL A 108 B 3 4 O HIS A 105 ? O HIS A 105 N VAL A 124 ? N VAL A 124 C 1 2 O ASN B 44 ? O ASN B 44 N CYS B 84 ? N CYS B 84 C 2 3 O MET B 79 ? O MET B 79 N LYS B 104 ? N LYS B 104 D 1 2 O LYS B 61 ? O LYS B 61 N GLN B 74 ? N GLN B 74 D 2 3 O TYR B 73 ? O TYR B 73 N VAL B 108 ? N VAL B 108 D 3 4 O HIS B 105 ? O HIS B 105 N VAL B 124 ? N VAL B 124 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 20 'BINDING SITE FOR RESIDUE ATR A 125' AC2 Software ? ? ? ? 18 'BINDING SITE FOR RESIDUE ATR B 125' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CIT B 998' AC4 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE CIT A 999' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 20 ALA A 4 ? ALA A 4 . ? 1_555 ? 2 AC1 20 LYS A 7 ? LYS A 7 . ? 1_555 ? 3 AC1 20 GLN A 11 ? GLN A 11 . ? 1_555 ? 4 AC1 20 HIS A 12 ? HIS A 12 . ? 1_555 ? 5 AC1 20 LYS A 41 ? LYS A 41 . ? 1_555 ? 6 AC1 20 CYS A 65 ? CYS A 65 . ? 1_555 ? 7 AC1 20 ASN A 67 ? ASN A 67 . ? 1_555 ? 8 AC1 20 GLN A 69 ? GLN A 69 . ? 1_555 ? 9 AC1 20 ASN A 71 ? ASN A 71 . ? 1_555 ? 10 AC1 20 ALA A 109 ? ALA A 109 . ? 1_555 ? 11 AC1 20 GLU A 111 ? GLU A 111 . ? 1_555 ? 12 AC1 20 VAL A 118 ? VAL A 118 . ? 1_555 ? 13 AC1 20 HIS A 119 ? HIS A 119 . ? 1_555 ? 14 AC1 20 PHE A 120 ? PHE A 120 . ? 1_555 ? 15 AC1 20 HOH G . ? HOH A 1014 . ? 1_555 ? 16 AC1 20 HOH G . ? HOH A 1024 . ? 1_555 ? 17 AC1 20 HOH G . ? HOH A 1028 . ? 1_555 ? 18 AC1 20 HOH G . ? HOH A 1038 . ? 1_555 ? 19 AC1 20 HOH G . ? HOH A 1051 . ? 1_555 ? 20 AC1 20 HOH G . ? HOH A 1060 . ? 1_555 ? 21 AC2 18 THR A 70 ? THR A 70 . ? 4_555 ? 22 AC2 18 ALA B 4 ? ALA B 4 . ? 1_555 ? 23 AC2 18 LYS B 7 ? LYS B 7 . ? 1_555 ? 24 AC2 18 GLN B 11 ? GLN B 11 . ? 1_555 ? 25 AC2 18 HIS B 12 ? HIS B 12 . ? 1_555 ? 26 AC2 18 CYS B 65 ? CYS B 65 . ? 1_555 ? 27 AC2 18 ASN B 67 ? ASN B 67 . ? 1_555 ? 28 AC2 18 GLN B 69 ? GLN B 69 . ? 1_555 ? 29 AC2 18 ASN B 71 ? ASN B 71 . ? 1_555 ? 30 AC2 18 ALA B 109 ? ALA B 109 . ? 1_555 ? 31 AC2 18 GLU B 111 ? GLU B 111 . ? 1_555 ? 32 AC2 18 VAL B 118 ? VAL B 118 . ? 1_555 ? 33 AC2 18 HIS B 119 ? HIS B 119 . ? 1_555 ? 34 AC2 18 PHE B 120 ? PHE B 120 . ? 1_555 ? 35 AC2 18 HOH H . ? HOH B 1003 . ? 1_555 ? 36 AC2 18 HOH H . ? HOH B 1004 . ? 1_555 ? 37 AC2 18 HOH H . ? HOH B 1038 . ? 1_555 ? 38 AC2 18 HOH H . ? HOH B 1045 . ? 1_555 ? 39 AC3 4 THR B 87 ? THR B 87 . ? 1_555 ? 40 AC3 4 GLY B 88 ? GLY B 88 . ? 1_555 ? 41 AC3 4 SER B 89 ? SER B 89 . ? 1_555 ? 42 AC3 4 ALA B 96 ? ALA B 96 . ? 1_555 ? 43 AC4 7 GLU A 2 ? GLU A 2 . ? 1_555 ? 44 AC4 7 ARG A 10 ? ARG A 10 . ? 1_555 ? 45 AC4 7 SER A 18 ? SER A 18 . ? 4_546 ? 46 AC4 7 SER A 32 ? SER A 32 . ? 1_555 ? 47 AC4 7 ARG A 33 ? ARG A 33 . ? 1_555 ? 48 AC4 7 ASN A 34 ? ASN A 34 . ? 1_555 ? 49 AC4 7 HOH G . ? HOH A 1049 . ? 1_555 ? # _database_PDB_matrix.entry_id 1AFL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1AFL _atom_sites.fract_transf_matrix[1][1] 0.009811 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000014 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029904 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013570 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 HIS 12 12 12 HIS HIS A . n A 1 13 MET 13 13 13 MET MET A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 MET 29 29 29 MET MET A . n A 1 30 MET 30 30 30 MET MET A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 CYS 40 40 40 CYS CYS A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 CYS 58 58 58 CYS CYS A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 CYS 65 65 65 CYS CYS A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 CYS 72 72 72 CYS CYS A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 TYR 76 76 76 TYR TYR A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 MET 79 79 79 MET MET A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 CYS 84 84 84 CYS CYS A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 ASN 94 94 94 ASN ASN A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 GLN 101 101 101 GLN GLN A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 HIS 105 105 105 HIS HIS A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 CYS 110 110 110 CYS CYS A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 TYR 115 115 115 TYR TYR A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 HIS 119 119 119 HIS HIS A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 VAL 124 124 124 VAL VAL A . n B 1 1 LYS 1 1 1 LYS LYS B . n B 1 2 GLU 2 2 2 GLU GLU B . n B 1 3 THR 3 3 3 THR THR B . n B 1 4 ALA 4 4 4 ALA ALA B . n B 1 5 ALA 5 5 5 ALA ALA B . n B 1 6 ALA 6 6 6 ALA ALA B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 PHE 8 8 8 PHE PHE B . n B 1 9 GLU 9 9 9 GLU GLU B . n B 1 10 ARG 10 10 10 ARG ARG B . n B 1 11 GLN 11 11 11 GLN GLN B . n B 1 12 HIS 12 12 12 HIS HIS B . n B 1 13 MET 13 13 13 MET MET B . n B 1 14 ASP 14 14 14 ASP ASP B . n B 1 15 SER 15 15 15 SER SER B . n B 1 16 SER 16 16 16 SER SER B . n B 1 17 THR 17 17 17 THR THR B . n B 1 18 SER 18 18 18 SER SER B . n B 1 19 ALA 19 19 19 ALA ALA B . n B 1 20 ALA 20 20 20 ALA ALA B . n B 1 21 SER 21 21 21 SER SER B . n B 1 22 SER 22 22 22 SER SER B . n B 1 23 SER 23 23 23 SER SER B . n B 1 24 ASN 24 24 24 ASN ASN B . n B 1 25 TYR 25 25 25 TYR TYR B . n B 1 26 CYS 26 26 26 CYS CYS B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 GLN 28 28 28 GLN GLN B . n B 1 29 MET 29 29 29 MET MET B . n B 1 30 MET 30 30 30 MET MET B . n B 1 31 LYS 31 31 31 LYS LYS B . n B 1 32 SER 32 32 32 SER SER B . n B 1 33 ARG 33 33 33 ARG ARG B . n B 1 34 ASN 34 34 34 ASN ASN B . n B 1 35 LEU 35 35 35 LEU LEU B . n B 1 36 THR 36 36 36 THR THR B . n B 1 37 LYS 37 37 37 LYS LYS B . n B 1 38 ASP 38 38 38 ASP ASP B . n B 1 39 ARG 39 39 39 ARG ARG B . n B 1 40 CYS 40 40 40 CYS CYS B . n B 1 41 LYS 41 41 41 LYS LYS B . n B 1 42 PRO 42 42 42 PRO PRO B . n B 1 43 VAL 43 43 43 VAL VAL B . n B 1 44 ASN 44 44 44 ASN ASN B . n B 1 45 THR 45 45 45 THR THR B . n B 1 46 PHE 46 46 46 PHE PHE B . n B 1 47 VAL 47 47 47 VAL VAL B . n B 1 48 HIS 48 48 48 HIS HIS B . n B 1 49 GLU 49 49 49 GLU GLU B . n B 1 50 SER 50 50 50 SER SER B . n B 1 51 LEU 51 51 51 LEU LEU B . n B 1 52 ALA 52 52 52 ALA ALA B . n B 1 53 ASP 53 53 53 ASP ASP B . n B 1 54 VAL 54 54 54 VAL VAL B . n B 1 55 GLN 55 55 55 GLN GLN B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 VAL 57 57 57 VAL VAL B . n B 1 58 CYS 58 58 58 CYS CYS B . n B 1 59 SER 59 59 59 SER SER B . n B 1 60 GLN 60 60 60 GLN GLN B . n B 1 61 LYS 61 61 61 LYS LYS B . n B 1 62 ASN 62 62 62 ASN ASN B . n B 1 63 VAL 63 63 63 VAL VAL B . n B 1 64 ALA 64 64 64 ALA ALA B . n B 1 65 CYS 65 65 65 CYS CYS B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 ASN 67 67 67 ASN ASN B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 GLN 69 69 69 GLN GLN B . n B 1 70 THR 70 70 70 THR THR B . n B 1 71 ASN 71 71 71 ASN ASN B . n B 1 72 CYS 72 72 72 CYS CYS B . n B 1 73 TYR 73 73 73 TYR TYR B . n B 1 74 GLN 74 74 74 GLN GLN B . n B 1 75 SER 75 75 75 SER SER B . n B 1 76 TYR 76 76 76 TYR TYR B . n B 1 77 SER 77 77 77 SER SER B . n B 1 78 THR 78 78 78 THR THR B . n B 1 79 MET 79 79 79 MET MET B . n B 1 80 SER 80 80 80 SER SER B . n B 1 81 ILE 81 81 81 ILE ILE B . n B 1 82 THR 82 82 82 THR THR B . n B 1 83 ASP 83 83 83 ASP ASP B . n B 1 84 CYS 84 84 84 CYS CYS B . n B 1 85 ARG 85 85 85 ARG ARG B . n B 1 86 GLU 86 86 86 GLU GLU B . n B 1 87 THR 87 87 87 THR THR B . n B 1 88 GLY 88 88 88 GLY GLY B . n B 1 89 SER 89 89 89 SER SER B . n B 1 90 SER 90 90 90 SER SER B . n B 1 91 LYS 91 91 91 LYS LYS B . n B 1 92 TYR 92 92 92 TYR TYR B . n B 1 93 PRO 93 93 93 PRO PRO B . n B 1 94 ASN 94 94 94 ASN ASN B . n B 1 95 CYS 95 95 95 CYS CYS B . n B 1 96 ALA 96 96 96 ALA ALA B . n B 1 97 TYR 97 97 97 TYR TYR B . n B 1 98 LYS 98 98 98 LYS LYS B . n B 1 99 THR 99 99 99 THR THR B . n B 1 100 THR 100 100 100 THR THR B . n B 1 101 GLN 101 101 101 GLN GLN B . n B 1 102 ALA 102 102 102 ALA ALA B . n B 1 103 ASN 103 103 103 ASN ASN B . n B 1 104 LYS 104 104 104 LYS LYS B . n B 1 105 HIS 105 105 105 HIS HIS B . n B 1 106 ILE 106 106 106 ILE ILE B . n B 1 107 ILE 107 107 107 ILE ILE B . n B 1 108 VAL 108 108 108 VAL VAL B . n B 1 109 ALA 109 109 109 ALA ALA B . n B 1 110 CYS 110 110 110 CYS CYS B . n B 1 111 GLU 111 111 111 GLU GLU B . n B 1 112 GLY 112 112 112 GLY GLY B . n B 1 113 ASN 113 113 113 ASN ASN B . n B 1 114 PRO 114 114 114 PRO PRO B . n B 1 115 TYR 115 115 115 TYR TYR B . n B 1 116 VAL 116 116 116 VAL VAL B . n B 1 117 PRO 117 117 117 PRO PRO B . n B 1 118 VAL 118 118 118 VAL VAL B . n B 1 119 HIS 119 119 119 HIS HIS B . n B 1 120 PHE 120 120 120 PHE PHE B . n B 1 121 ASP 121 121 121 ASP ASP B . n B 1 122 ALA 122 122 122 ALA ALA B . n B 1 123 SER 123 123 123 SER SER B . n B 1 124 VAL 124 124 124 VAL VAL B . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G 2 1 B,E,F,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-03-18 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 X-PLOR 'model building' 3.1 ? 3 X-PLOR refinement 3.1 ? 4 X-PLOR phasing 3.1 ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 1007 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 1043 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 39 ? ? 177.63 178.45 2 1 HIS A 48 ? ? -100.05 66.42 3 1 GLN A 60 ? ? -98.85 -136.08 4 1 ASN A 71 ? ? -87.56 31.21 5 1 ALA B 19 ? ? -171.92 143.68 6 1 HIS B 48 ? ? -107.85 61.52 7 1 GLN B 60 ? ? -102.17 -131.79 8 1 ASN B 71 ? ? -94.79 34.23 9 1 SER B 90 ? ? -39.24 132.80 10 1 ASN B 94 ? ? -103.18 79.28 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id SER _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 18 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id OG _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id SER _pdbx_unobs_or_zero_occ_atoms.label_seq_id 18 _pdbx_unobs_or_zero_occ_atoms.label_atom_id OG # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE" ATR 3 'CITRIC ACID' CIT 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ATR 1 125 125 ATR ATR A . D 3 CIT 1 999 999 CIT CIT A . E 2 ATR 1 125 125 ATR ATR B . F 3 CIT 1 998 998 CIT CIT B . G 4 HOH 1 1000 1 HOH HOH A . G 4 HOH 2 1001 2 HOH HOH A . G 4 HOH 3 1002 3 HOH HOH A . G 4 HOH 4 1003 4 HOH HOH A . G 4 HOH 5 1004 5 HOH HOH A . G 4 HOH 6 1005 6 HOH HOH A . G 4 HOH 7 1006 7 HOH HOH A . G 4 HOH 8 1007 8 HOH HOH A . G 4 HOH 9 1008 9 HOH HOH A . G 4 HOH 10 1009 10 HOH HOH A . G 4 HOH 11 1010 11 HOH HOH A . G 4 HOH 12 1011 13 HOH HOH A . G 4 HOH 13 1012 15 HOH HOH A . G 4 HOH 14 1013 16 HOH HOH A . G 4 HOH 15 1014 18 HOH HOH A . G 4 HOH 16 1015 19 HOH HOH A . G 4 HOH 17 1016 20 HOH HOH A . G 4 HOH 18 1017 21 HOH HOH A . G 4 HOH 19 1018 22 HOH HOH A . G 4 HOH 20 1019 23 HOH HOH A . G 4 HOH 21 1020 24 HOH HOH A . G 4 HOH 22 1021 37 HOH HOH A . G 4 HOH 23 1022 53 HOH HOH A . G 4 HOH 24 1023 56 HOH HOH A . G 4 HOH 25 1024 57 HOH HOH A . G 4 HOH 26 1025 58 HOH HOH A . G 4 HOH 27 1026 60 HOH HOH A . G 4 HOH 28 1027 63 HOH HOH A . G 4 HOH 29 1028 64 HOH HOH A . G 4 HOH 30 1029 65 HOH HOH A . G 4 HOH 31 1030 70 HOH HOH A . G 4 HOH 32 1031 71 HOH HOH A . G 4 HOH 33 1032 74 HOH HOH A . G 4 HOH 34 1033 75 HOH HOH A . G 4 HOH 35 1034 78 HOH HOH A . G 4 HOH 36 1035 80 HOH HOH A . G 4 HOH 37 1036 81 HOH HOH A . G 4 HOH 38 1037 83 HOH HOH A . G 4 HOH 39 1038 84 HOH HOH A . G 4 HOH 40 1039 85 HOH HOH A . G 4 HOH 41 1040 86 HOH HOH A . G 4 HOH 42 1041 87 HOH HOH A . G 4 HOH 43 1042 88 HOH HOH A . G 4 HOH 44 1043 90 HOH HOH A . G 4 HOH 45 1044 91 HOH HOH A . G 4 HOH 46 1045 92 HOH HOH A . G 4 HOH 47 1046 93 HOH HOH A . G 4 HOH 48 1047 94 HOH HOH A . G 4 HOH 49 1048 96 HOH HOH A . G 4 HOH 50 1049 97 HOH HOH A . G 4 HOH 51 1050 98 HOH HOH A . G 4 HOH 52 1051 99 HOH HOH A . G 4 HOH 53 1052 101 HOH HOH A . G 4 HOH 54 1053 102 HOH HOH A . G 4 HOH 55 1054 103 HOH HOH A . G 4 HOH 56 1055 104 HOH HOH A . G 4 HOH 57 1056 106 HOH HOH A . G 4 HOH 58 1057 107 HOH HOH A . G 4 HOH 59 1058 108 HOH HOH A . G 4 HOH 60 1059 109 HOH HOH A . G 4 HOH 61 1060 110 HOH HOH A . G 4 HOH 62 1061 111 HOH HOH A . G 4 HOH 63 1062 116 HOH HOH A . G 4 HOH 64 1063 118 HOH HOH A . G 4 HOH 65 1064 119 HOH HOH A . G 4 HOH 66 1065 120 HOH HOH A . G 4 HOH 67 1066 122 HOH HOH A . H 4 HOH 1 999 12 HOH HOH B . H 4 HOH 2 1000 14 HOH HOH B . H 4 HOH 3 1001 17 HOH HOH B . H 4 HOH 4 1002 25 HOH HOH B . H 4 HOH 5 1003 26 HOH HOH B . H 4 HOH 6 1004 27 HOH HOH B . H 4 HOH 7 1005 28 HOH HOH B . H 4 HOH 8 1006 29 HOH HOH B . H 4 HOH 9 1007 30 HOH HOH B . H 4 HOH 10 1008 31 HOH HOH B . H 4 HOH 11 1009 32 HOH HOH B . H 4 HOH 12 1010 33 HOH HOH B . H 4 HOH 13 1011 34 HOH HOH B . H 4 HOH 14 1012 35 HOH HOH B . H 4 HOH 15 1013 36 HOH HOH B . H 4 HOH 16 1014 38 HOH HOH B . H 4 HOH 17 1015 39 HOH HOH B . H 4 HOH 18 1016 40 HOH HOH B . H 4 HOH 19 1017 41 HOH HOH B . H 4 HOH 20 1018 42 HOH HOH B . H 4 HOH 21 1019 43 HOH HOH B . H 4 HOH 22 1020 44 HOH HOH B . H 4 HOH 23 1021 45 HOH HOH B . H 4 HOH 24 1022 46 HOH HOH B . H 4 HOH 25 1023 47 HOH HOH B . H 4 HOH 26 1024 48 HOH HOH B . H 4 HOH 27 1025 49 HOH HOH B . H 4 HOH 28 1026 50 HOH HOH B . H 4 HOH 29 1027 51 HOH HOH B . H 4 HOH 30 1028 52 HOH HOH B . H 4 HOH 31 1029 54 HOH HOH B . H 4 HOH 32 1030 55 HOH HOH B . H 4 HOH 33 1031 59 HOH HOH B . H 4 HOH 34 1032 61 HOH HOH B . H 4 HOH 35 1033 62 HOH HOH B . H 4 HOH 36 1034 66 HOH HOH B . H 4 HOH 37 1035 67 HOH HOH B . H 4 HOH 38 1036 68 HOH HOH B . H 4 HOH 39 1037 69 HOH HOH B . H 4 HOH 40 1038 72 HOH HOH B . H 4 HOH 41 1039 73 HOH HOH B . H 4 HOH 42 1040 76 HOH HOH B . H 4 HOH 43 1041 77 HOH HOH B . H 4 HOH 44 1042 79 HOH HOH B . H 4 HOH 45 1043 82 HOH HOH B . H 4 HOH 46 1044 89 HOH HOH B . H 4 HOH 47 1045 95 HOH HOH B . H 4 HOH 48 1046 100 HOH HOH B . H 4 HOH 49 1047 105 HOH HOH B . H 4 HOH 50 1048 112 HOH HOH B . H 4 HOH 51 1049 113 HOH HOH B . H 4 HOH 52 1050 114 HOH HOH B . H 4 HOH 53 1051 115 HOH HOH B . H 4 HOH 54 1052 117 HOH HOH B . H 4 HOH 55 1053 121 HOH HOH B . #