data_1AGI # _entry.id 1AGI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1AGI WWPDB D_1000170787 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1AGI _pdbx_database_status.recvd_initial_deposition_date 1995-01-06 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site ? _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Acharya, K.R.' 1 'Shapiro, R.' 2 'Riordan, J.F.' 3 'Vallee, B.L.' 4 # _citation.id primary _citation.title 'Crystal structure of bovine angiogenin at 1.5-A resolution.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 92 _citation.page_first 2949 _citation.page_last 2953 _citation.year 1995 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 7708754 _citation.pdbx_database_id_DOI 10.1073/pnas.92.7.2949 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Acharya, K.R.' 1 primary 'Shapiro, R.' 2 primary 'Riordan, J.F.' 3 primary 'Vallee, B.L.' 4 # _cell.entry_id 1AGI _cell.length_a 30.690 _cell.length_b 54.450 _cell.length_c 74.750 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AGI _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat ANGIOGENIN 14621.514 1 3.1.27.- ? ? ? 2 water nat water 18.015 91 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AQDDYRYIHFLTQHYDAKPKGRNDEYCFNMMKNRRLTRPCKDRNTFIHGNKNDIKAICEDRNGQPYRGDLRISKSEFQIT ICKHKGGSSRPPCRYGATEDSRVIVVGCENGLPVHFDESFITPRH ; _entity_poly.pdbx_seq_one_letter_code_can ;AQDDYRYIHFLTQHYDAKPKGRNDEYCFNMMKNRRLTRPCKDRNTFIHGNKNDIKAICEDRNGQPYRGDLRISKSEFQIT ICKHKGGSSRPPCRYGATEDSRVIVVGCENGLPVHFDESFITPRH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLN n 1 3 ASP n 1 4 ASP n 1 5 TYR n 1 6 ARG n 1 7 TYR n 1 8 ILE n 1 9 HIS n 1 10 PHE n 1 11 LEU n 1 12 THR n 1 13 GLN n 1 14 HIS n 1 15 TYR n 1 16 ASP n 1 17 ALA n 1 18 LYS n 1 19 PRO n 1 20 LYS n 1 21 GLY n 1 22 ARG n 1 23 ASN n 1 24 ASP n 1 25 GLU n 1 26 TYR n 1 27 CYS n 1 28 PHE n 1 29 ASN n 1 30 MET n 1 31 MET n 1 32 LYS n 1 33 ASN n 1 34 ARG n 1 35 ARG n 1 36 LEU n 1 37 THR n 1 38 ARG n 1 39 PRO n 1 40 CYS n 1 41 LYS n 1 42 ASP n 1 43 ARG n 1 44 ASN n 1 45 THR n 1 46 PHE n 1 47 ILE n 1 48 HIS n 1 49 GLY n 1 50 ASN n 1 51 LYS n 1 52 ASN n 1 53 ASP n 1 54 ILE n 1 55 LYS n 1 56 ALA n 1 57 ILE n 1 58 CYS n 1 59 GLU n 1 60 ASP n 1 61 ARG n 1 62 ASN n 1 63 GLY n 1 64 GLN n 1 65 PRO n 1 66 TYR n 1 67 ARG n 1 68 GLY n 1 69 ASP n 1 70 LEU n 1 71 ARG n 1 72 ILE n 1 73 SER n 1 74 LYS n 1 75 SER n 1 76 GLU n 1 77 PHE n 1 78 GLN n 1 79 ILE n 1 80 THR n 1 81 ILE n 1 82 CYS n 1 83 LYS n 1 84 HIS n 1 85 LYS n 1 86 GLY n 1 87 GLY n 1 88 SER n 1 89 SER n 1 90 ARG n 1 91 PRO n 1 92 PRO n 1 93 CYS n 1 94 ARG n 1 95 TYR n 1 96 GLY n 1 97 ALA n 1 98 THR n 1 99 GLU n 1 100 ASP n 1 101 SER n 1 102 ARG n 1 103 VAL n 1 104 ILE n 1 105 VAL n 1 106 VAL n 1 107 GLY n 1 108 CYS n 1 109 GLU n 1 110 ASN n 1 111 GLY n 1 112 LEU n 1 113 PRO n 1 114 VAL n 1 115 HIS n 1 116 PHE n 1 117 ASP n 1 118 GLU n 1 119 SER n 1 120 PHE n 1 121 ILE n 1 122 THR n 1 123 PRO n 1 124 ARG n 1 125 HIS n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name cattle _entity_src_nat.pdbx_organism_scientific 'Bos taurus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9913 _entity_src_nat.genus Bos _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue MILK _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ANG1_BOVIN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P10152 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;AQDDYRYIHFLTQHYDAKPKGRNDEYCFNMMKNRRLTRPCKDRNTFIHGNKNDIKAICEDRNGQPYRGDLRISKSEFQIT ICKHKGGSSRPPCRYGATEDSRVIVVGCENGLPVHFDESFITPRH ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1AGI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 125 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P10152 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 125 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 125 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1AGI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_percent_sol 42.38 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _reflns.entry_id 1AGI _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 8.0 _reflns.d_resolution_high 1.5 _reflns.number_obs 17940 _reflns.number_all ? _reflns.percent_possible_obs 87.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1AGI _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 1.5 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.203 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.203 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1024 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 91 _refine_hist.number_atoms_total 1115 _refine_hist.d_res_high 1.5 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.53 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1AGI _struct.title 'CRYSTAL STRUCTURE OF BOVINE ANGIOGENIN AT 1.5 ANGSTROMS RESOLUTION' _struct.pdbx_descriptor ANGIOGENIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1AGI _struct_keywords.pdbx_keywords ENDONUCLEASE _struct_keywords.text ENDONUCLEASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1 ASP A 4 ? TYR A 15 ? ASP A 4 TYR A 15 1 ? 12 HELX_P HELX_P2 H2 ASN A 23 ? ARG A 34 ? ASN A 23 ARG A 34 1 ? 12 HELX_P HELX_P3 3 ASN A 50 ? GLU A 59 ? ASN A 50 GLU A 59 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 27 SG ? ? ? 1_555 A CYS 82 SG ? ? A CYS 27 A CYS 82 1_555 ? ? ? ? ? ? ? 2.015 ? disulf2 disulf ? ? A CYS 40 SG ? ? ? 1_555 A CYS 93 SG ? ? A CYS 40 A CYS 93 1_555 ? ? ? ? ? ? ? 2.017 ? disulf3 disulf ? ? A CYS 58 SG ? ? ? 1_555 A CYS 108 SG ? ? A CYS 58 A CYS 108 1_555 ? ? ? ? ? ? ? 2.044 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 38 A . ? ARG 38 A PRO 39 A ? PRO 39 A 1 0.12 2 PRO 91 A . ? PRO 91 A PRO 92 A ? PRO 92 A 1 0.06 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details S1 ? 3 ? S2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense S1 1 2 ? anti-parallel S1 2 3 ? anti-parallel S2 1 2 ? anti-parallel S2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id S1 1 ASP A 42 ? HIS A 48 ? ASP A 42 HIS A 48 S1 2 PHE A 77 ? LYS A 85 ? PHE A 77 LYS A 85 S1 3 ARG A 94 ? ARG A 102 ? ARG A 94 ARG A 102 S2 1 LEU A 70 ? LYS A 74 ? LEU A 70 LYS A 74 S2 2 ILE A 104 ? GLU A 109 ? ILE A 104 GLU A 109 S2 3 LEU A 112 ? ASP A 117 ? LEU A 112 ASP A 117 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details RAS Unknown ? ? ? ? 12 ? PRS Unknown ? ? ? ? 17 ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 RAS 12 GLN A 13 ? GLN A 13 . ? 1_555 ? 2 RAS 12 HIS A 14 ? HIS A 14 . ? 1_555 ? 3 RAS 12 LYS A 41 ? LYS A 41 . ? 1_555 ? 4 RAS 12 ARG A 43 ? ARG A 43 . ? 1_555 ? 5 RAS 12 ASN A 44 ? ASN A 44 . ? 1_555 ? 6 RAS 12 THR A 45 ? THR A 45 . ? 1_555 ? 7 RAS 12 HIS A 115 ? HIS A 115 . ? 1_555 ? 8 RAS 12 PHE A 116 ? PHE A 116 . ? 1_555 ? 9 RAS 12 ASP A 117 ? ASP A 117 . ? 1_555 ? 10 RAS 12 GLU A 118 ? GLU A 118 . ? 1_555 ? 11 RAS 12 SER A 119 ? SER A 119 . ? 1_555 ? 12 RAS 12 PHE A 120 ? PHE A 120 . ? 1_555 ? 13 PRS 17 GLU A 59 ? GLU A 59 . ? 1_555 ? 14 PRS 17 ASP A 60 ? ASP A 60 . ? 1_555 ? 15 PRS 17 ARG A 61 ? ARG A 61 . ? 1_555 ? 16 PRS 17 ASN A 62 ? ASN A 62 . ? 1_555 ? 17 PRS 17 GLY A 63 ? GLY A 63 . ? 1_555 ? 18 PRS 17 GLN A 64 ? GLN A 64 . ? 1_555 ? 19 PRS 17 PRO A 65 ? PRO A 65 . ? 1_555 ? 20 PRS 17 TYR A 66 ? TYR A 66 . ? 1_555 ? 21 PRS 17 ARG A 67 ? ARG A 67 . ? 1_555 ? 22 PRS 17 GLY A 68 ? GLY A 68 . ? 1_555 ? 23 PRS 17 ASP A 69 ? ASP A 69 . ? 1_555 ? 24 PRS 17 LEU A 70 ? LEU A 70 . ? 1_555 ? 25 PRS 17 ARG A 71 ? ARG A 71 . ? 1_555 ? 26 PRS 17 GLU A 109 ? GLU A 109 . ? 1_555 ? 27 PRS 17 ASN A 110 ? ASN A 110 . ? 1_555 ? 28 PRS 17 GLY A 111 ? GLY A 111 . ? 1_555 ? 29 PRS 17 LEU A 112 ? LEU A 112 . ? 1_555 ? # _database_PDB_matrix.entry_id 1AGI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1AGI _atom_sites.fract_transf_matrix[1][1] 0.032584 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018365 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013378 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'CIS PROLINE - PRO 39' 2 'CIS PROLINE - PRO 92' # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 HIS 9 9 9 HIS HIS A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 HIS 14 14 14 HIS HIS A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 CYS 27 27 27 CYS CYS A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 MET 30 30 30 MET MET A . n A 1 31 MET 31 31 31 MET MET A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 CYS 40 40 40 CYS CYS A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 CYS 58 58 58 CYS CYS A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 PHE 77 77 77 PHE PHE A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 CYS 82 82 82 CYS CYS A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 HIS 84 84 84 HIS HIS A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 CYS 93 93 93 CYS CYS A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 CYS 108 108 108 CYS CYS A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 ASN 110 110 110 ASN ASN A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 HIS 115 115 115 HIS HIS A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 HIS 125 125 125 HIS HIS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 127 127 HOH HOH A . B 2 HOH 2 128 128 HOH HOH A . B 2 HOH 3 129 129 HOH HOH A . B 2 HOH 4 130 130 HOH HOH A . B 2 HOH 5 131 131 HOH HOH A . B 2 HOH 6 132 132 HOH HOH A . B 2 HOH 7 133 133 HOH HOH A . B 2 HOH 8 134 134 HOH HOH A . B 2 HOH 9 135 135 HOH HOH A . B 2 HOH 10 136 136 HOH HOH A . B 2 HOH 11 137 137 HOH HOH A . B 2 HOH 12 138 138 HOH HOH A . B 2 HOH 13 139 139 HOH HOH A . B 2 HOH 14 140 140 HOH HOH A . B 2 HOH 15 141 141 HOH HOH A . B 2 HOH 16 142 142 HOH HOH A . B 2 HOH 17 143 143 HOH HOH A . B 2 HOH 18 144 144 HOH HOH A . B 2 HOH 19 145 145 HOH HOH A . B 2 HOH 20 146 146 HOH HOH A . B 2 HOH 21 147 147 HOH HOH A . B 2 HOH 22 148 148 HOH HOH A . B 2 HOH 23 149 149 HOH HOH A . B 2 HOH 24 150 150 HOH HOH A . B 2 HOH 25 151 151 HOH HOH A . B 2 HOH 26 152 152 HOH HOH A . B 2 HOH 27 153 153 HOH HOH A . B 2 HOH 28 154 154 HOH HOH A . B 2 HOH 29 155 155 HOH HOH A . B 2 HOH 30 156 156 HOH HOH A . B 2 HOH 31 157 157 HOH HOH A . B 2 HOH 32 158 158 HOH HOH A . B 2 HOH 33 159 159 HOH HOH A . B 2 HOH 34 160 160 HOH HOH A . B 2 HOH 35 161 161 HOH HOH A . B 2 HOH 36 162 162 HOH HOH A . B 2 HOH 37 163 163 HOH HOH A . B 2 HOH 38 164 164 HOH HOH A . B 2 HOH 39 165 165 HOH HOH A . B 2 HOH 40 166 166 HOH HOH A . B 2 HOH 41 167 167 HOH HOH A . B 2 HOH 42 168 168 HOH HOH A . B 2 HOH 43 169 169 HOH HOH A . B 2 HOH 44 170 170 HOH HOH A . B 2 HOH 45 171 171 HOH HOH A . B 2 HOH 46 172 172 HOH HOH A . B 2 HOH 47 173 173 HOH HOH A . B 2 HOH 48 174 174 HOH HOH A . B 2 HOH 49 175 175 HOH HOH A . B 2 HOH 50 176 176 HOH HOH A . B 2 HOH 51 177 177 HOH HOH A . B 2 HOH 52 178 178 HOH HOH A . B 2 HOH 53 179 179 HOH HOH A . B 2 HOH 54 180 180 HOH HOH A . B 2 HOH 55 181 181 HOH HOH A . B 2 HOH 56 182 182 HOH HOH A . B 2 HOH 57 183 183 HOH HOH A . B 2 HOH 58 184 184 HOH HOH A . B 2 HOH 59 185 185 HOH HOH A . B 2 HOH 60 186 186 HOH HOH A . B 2 HOH 61 187 187 HOH HOH A . B 2 HOH 62 188 188 HOH HOH A . B 2 HOH 63 189 189 HOH HOH A . B 2 HOH 64 190 190 HOH HOH A . B 2 HOH 65 191 191 HOH HOH A . B 2 HOH 66 192 192 HOH HOH A . B 2 HOH 67 193 193 HOH HOH A . B 2 HOH 68 194 194 HOH HOH A . B 2 HOH 69 195 195 HOH HOH A . B 2 HOH 70 196 196 HOH HOH A . B 2 HOH 71 197 197 HOH HOH A . B 2 HOH 72 198 198 HOH HOH A . B 2 HOH 73 199 199 HOH HOH A . B 2 HOH 74 200 200 HOH HOH A . B 2 HOH 75 201 201 HOH HOH A . B 2 HOH 76 202 202 HOH HOH A . B 2 HOH 77 203 203 HOH HOH A . B 2 HOH 78 204 204 HOH HOH A . B 2 HOH 79 205 205 HOH HOH A . B 2 HOH 80 206 206 HOH HOH A . B 2 HOH 81 207 207 HOH HOH A . B 2 HOH 82 208 208 HOH HOH A . B 2 HOH 83 209 209 HOH HOH A . B 2 HOH 84 210 210 HOH HOH A . B 2 HOH 85 211 211 HOH HOH A . B 2 HOH 86 212 212 HOH HOH A . B 2 HOH 87 213 213 HOH HOH A . B 2 HOH 88 214 214 HOH HOH A . B 2 HOH 89 215 215 HOH HOH A . B 2 HOH 90 216 216 HOH HOH A . B 2 HOH 91 217 217 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-04-03 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 186 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 187 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.99 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 159 ? ? 1_555 O A HOH 181 ? ? 1_455 1.99 2 1 O A HOH 150 ? ? 1_555 O A HOH 183 ? ? 4_545 2.00 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 3 ? ? -41.93 101.74 2 1 ASN A 23 ? ? -112.73 -169.76 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #