data_1AKZ # _entry.id 1AKZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1AKZ pdb_00001akz 10.2210/pdb1akz/pdb WWPDB D_1000170946 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-08-20 2 'Structure model' 1 1 2008-03-04 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1AKZ _pdbx_database_status.recvd_initial_deposition_date 1997-05-27 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tainer, J.A.' 1 'Mol, C.D.' 2 # _citation.id primary _citation.title 'Base excision repair initiation revealed by crystal structures and binding kinetics of human uracil-DNA glycosylase with DNA.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 17 _citation.page_first 5214 _citation.page_last 5226 _citation.year 1998 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9724657 _citation.pdbx_database_id_DOI 10.1093/emboj/17.17.5214 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Parikh, S.S.' 1 ? primary 'Mol, C.D.' 2 ? primary 'Slupphaug, G.' 3 ? primary 'Bharati, S.' 4 ? primary 'Krokan, H.E.' 5 ? primary 'Tainer, J.A.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'URACIL-DNA GLYCOSYLASE' 25544.137 1 3.2.2.- 'P82M, V83E, G84F' ? ;STRUCTURE IS THAT OF RECOMBINANT HUMAN URACIL-DNA GLYCOSYLASE IN WHICH THE 84 N-TERMINAL AMINO ACIDS CODED FOR BY THE UNG GENE HAVE BEEN REPLACED BY THREE RESIDUES FROM THE EXPRESSION VECTOR ; 2 water nat water 18.015 185 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'UDG, UNG' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MEFFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQ RPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLV FLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL ; _entity_poly.pdbx_seq_one_letter_code_can ;MEFFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQ RPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLV FLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 PHE n 1 4 PHE n 1 5 GLY n 1 6 GLU n 1 7 SER n 1 8 TRP n 1 9 LYS n 1 10 LYS n 1 11 HIS n 1 12 LEU n 1 13 SER n 1 14 GLY n 1 15 GLU n 1 16 PHE n 1 17 GLY n 1 18 LYS n 1 19 PRO n 1 20 TYR n 1 21 PHE n 1 22 ILE n 1 23 LYS n 1 24 LEU n 1 25 MET n 1 26 GLY n 1 27 PHE n 1 28 VAL n 1 29 ALA n 1 30 GLU n 1 31 GLU n 1 32 ARG n 1 33 LYS n 1 34 HIS n 1 35 TYR n 1 36 THR n 1 37 VAL n 1 38 TYR n 1 39 PRO n 1 40 PRO n 1 41 PRO n 1 42 HIS n 1 43 GLN n 1 44 VAL n 1 45 PHE n 1 46 THR n 1 47 TRP n 1 48 THR n 1 49 GLN n 1 50 MET n 1 51 CYS n 1 52 ASP n 1 53 ILE n 1 54 LYS n 1 55 ASP n 1 56 VAL n 1 57 LYS n 1 58 VAL n 1 59 VAL n 1 60 ILE n 1 61 LEU n 1 62 GLY n 1 63 GLN n 1 64 ASP n 1 65 PRO n 1 66 TYR n 1 67 HIS n 1 68 GLY n 1 69 PRO n 1 70 ASN n 1 71 GLN n 1 72 ALA n 1 73 HIS n 1 74 GLY n 1 75 LEU n 1 76 CYS n 1 77 PHE n 1 78 SER n 1 79 VAL n 1 80 GLN n 1 81 ARG n 1 82 PRO n 1 83 VAL n 1 84 PRO n 1 85 PRO n 1 86 PRO n 1 87 PRO n 1 88 SER n 1 89 LEU n 1 90 GLU n 1 91 ASN n 1 92 ILE n 1 93 TYR n 1 94 LYS n 1 95 GLU n 1 96 LEU n 1 97 SER n 1 98 THR n 1 99 ASP n 1 100 ILE n 1 101 GLU n 1 102 ASP n 1 103 PHE n 1 104 VAL n 1 105 HIS n 1 106 PRO n 1 107 GLY n 1 108 HIS n 1 109 GLY n 1 110 ASP n 1 111 LEU n 1 112 SER n 1 113 GLY n 1 114 TRP n 1 115 ALA n 1 116 LYS n 1 117 GLN n 1 118 GLY n 1 119 VAL n 1 120 LEU n 1 121 LEU n 1 122 LEU n 1 123 ASN n 1 124 ALA n 1 125 VAL n 1 126 LEU n 1 127 THR n 1 128 VAL n 1 129 ARG n 1 130 ALA n 1 131 HIS n 1 132 GLN n 1 133 ALA n 1 134 ASN n 1 135 SER n 1 136 HIS n 1 137 LYS n 1 138 GLU n 1 139 ARG n 1 140 GLY n 1 141 TRP n 1 142 GLU n 1 143 GLN n 1 144 PHE n 1 145 THR n 1 146 ASP n 1 147 ALA n 1 148 VAL n 1 149 VAL n 1 150 SER n 1 151 TRP n 1 152 LEU n 1 153 ASN n 1 154 GLN n 1 155 ASN n 1 156 SER n 1 157 ASN n 1 158 GLY n 1 159 LEU n 1 160 VAL n 1 161 PHE n 1 162 LEU n 1 163 LEU n 1 164 TRP n 1 165 GLY n 1 166 SER n 1 167 TYR n 1 168 ALA n 1 169 GLN n 1 170 LYS n 1 171 LYS n 1 172 GLY n 1 173 SER n 1 174 ALA n 1 175 ILE n 1 176 ASP n 1 177 ARG n 1 178 LYS n 1 179 ARG n 1 180 HIS n 1 181 HIS n 1 182 VAL n 1 183 LEU n 1 184 GLN n 1 185 THR n 1 186 ALA n 1 187 HIS n 1 188 PRO n 1 189 SER n 1 190 PRO n 1 191 LEU n 1 192 SER n 1 193 VAL n 1 194 TYR n 1 195 ARG n 1 196 GLY n 1 197 PHE n 1 198 PHE n 1 199 GLY n 1 200 CYS n 1 201 ARG n 1 202 HIS n 1 203 PHE n 1 204 SER n 1 205 LYS n 1 206 THR n 1 207 ASN n 1 208 GLU n 1 209 LEU n 1 210 LEU n 1 211 GLN n 1 212 LYS n 1 213 SER n 1 214 GLY n 1 215 LYS n 1 216 LYS n 1 217 PRO n 1 218 ILE n 1 219 ASP n 1 220 TRP n 1 221 LYS n 1 222 GLU n 1 223 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 82 82 MET MET A . n A 1 2 GLU 2 83 83 GLU GLU A . n A 1 3 PHE 3 84 84 PHE PHE A . n A 1 4 PHE 4 85 85 PHE PHE A . n A 1 5 GLY 5 86 86 GLY GLY A . n A 1 6 GLU 6 87 87 GLU GLU A . n A 1 7 SER 7 88 88 SER SER A . n A 1 8 TRP 8 89 89 TRP TRP A . n A 1 9 LYS 9 90 90 LYS LYS A . n A 1 10 LYS 10 91 91 LYS LYS A . n A 1 11 HIS 11 92 92 HIS HIS A . n A 1 12 LEU 12 93 93 LEU LEU A . n A 1 13 SER 13 94 94 SER SER A . n A 1 14 GLY 14 95 95 GLY GLY A . n A 1 15 GLU 15 96 96 GLU GLU A . n A 1 16 PHE 16 97 97 PHE PHE A . n A 1 17 GLY 17 98 98 GLY GLY A . n A 1 18 LYS 18 99 99 LYS LYS A . n A 1 19 PRO 19 100 100 PRO PRO A . n A 1 20 TYR 20 101 101 TYR TYR A . n A 1 21 PHE 21 102 102 PHE PHE A . n A 1 22 ILE 22 103 103 ILE ILE A . n A 1 23 LYS 23 104 104 LYS LYS A . n A 1 24 LEU 24 105 105 LEU LEU A . n A 1 25 MET 25 106 106 MET MET A . n A 1 26 GLY 26 107 107 GLY GLY A . n A 1 27 PHE 27 108 108 PHE PHE A . n A 1 28 VAL 28 109 109 VAL VAL A . n A 1 29 ALA 29 110 110 ALA ALA A . n A 1 30 GLU 30 111 111 GLU GLU A . n A 1 31 GLU 31 112 112 GLU GLU A . n A 1 32 ARG 32 113 113 ARG ARG A . n A 1 33 LYS 33 114 114 LYS LYS A . n A 1 34 HIS 34 115 115 HIS HIS A . n A 1 35 TYR 35 116 116 TYR TYR A . n A 1 36 THR 36 117 117 THR THR A . n A 1 37 VAL 37 118 118 VAL VAL A . n A 1 38 TYR 38 119 119 TYR TYR A . n A 1 39 PRO 39 120 120 PRO PRO A . n A 1 40 PRO 40 121 121 PRO PRO A . n A 1 41 PRO 41 122 122 PRO PRO A . n A 1 42 HIS 42 123 123 HIS HIS A . n A 1 43 GLN 43 124 124 GLN GLN A . n A 1 44 VAL 44 125 125 VAL VAL A . n A 1 45 PHE 45 126 126 PHE PHE A . n A 1 46 THR 46 127 127 THR THR A . n A 1 47 TRP 47 128 128 TRP TRP A . n A 1 48 THR 48 129 129 THR THR A . n A 1 49 GLN 49 130 130 GLN GLN A . n A 1 50 MET 50 131 131 MET MET A . n A 1 51 CYS 51 132 132 CYS CYS A . n A 1 52 ASP 52 133 133 ASP ASP A . n A 1 53 ILE 53 134 134 ILE ILE A . n A 1 54 LYS 54 135 135 LYS LYS A . n A 1 55 ASP 55 136 136 ASP ASP A . n A 1 56 VAL 56 137 137 VAL VAL A . n A 1 57 LYS 57 138 138 LYS LYS A . n A 1 58 VAL 58 139 139 VAL VAL A . n A 1 59 VAL 59 140 140 VAL VAL A . n A 1 60 ILE 60 141 141 ILE ILE A . n A 1 61 LEU 61 142 142 LEU LEU A . n A 1 62 GLY 62 143 143 GLY GLY A . n A 1 63 GLN 63 144 144 GLN GLN A . n A 1 64 ASP 64 145 145 ASP ASP A . n A 1 65 PRO 65 146 146 PRO PRO A . n A 1 66 TYR 66 147 147 TYR TYR A . n A 1 67 HIS 67 148 148 HIS HIS A . n A 1 68 GLY 68 149 149 GLY GLY A . n A 1 69 PRO 69 150 150 PRO PRO A . n A 1 70 ASN 70 151 151 ASN ASN A . n A 1 71 GLN 71 152 152 GLN GLN A . n A 1 72 ALA 72 153 153 ALA ALA A . n A 1 73 HIS 73 154 154 HIS HIS A . n A 1 74 GLY 74 155 155 GLY GLY A . n A 1 75 LEU 75 156 156 LEU LEU A . n A 1 76 CYS 76 157 157 CYS CYS A . n A 1 77 PHE 77 158 158 PHE PHE A . n A 1 78 SER 78 159 159 SER SER A . n A 1 79 VAL 79 160 160 VAL VAL A . n A 1 80 GLN 80 161 161 GLN GLN A . n A 1 81 ARG 81 162 162 ARG ARG A . n A 1 82 PRO 82 163 163 PRO PRO A . n A 1 83 VAL 83 164 164 VAL VAL A . n A 1 84 PRO 84 165 165 PRO PRO A . n A 1 85 PRO 85 166 166 PRO PRO A . n A 1 86 PRO 86 167 167 PRO PRO A . n A 1 87 PRO 87 168 168 PRO PRO A . n A 1 88 SER 88 169 169 SER SER A . n A 1 89 LEU 89 170 170 LEU LEU A . n A 1 90 GLU 90 171 171 GLU GLU A . n A 1 91 ASN 91 172 172 ASN ASN A . n A 1 92 ILE 92 173 173 ILE ILE A . n A 1 93 TYR 93 174 174 TYR TYR A . n A 1 94 LYS 94 175 175 LYS LYS A . n A 1 95 GLU 95 176 176 GLU GLU A . n A 1 96 LEU 96 177 177 LEU LEU A . n A 1 97 SER 97 178 178 SER SER A . n A 1 98 THR 98 179 179 THR THR A . n A 1 99 ASP 99 180 180 ASP ASP A . n A 1 100 ILE 100 181 181 ILE ILE A . n A 1 101 GLU 101 182 182 GLU GLU A . n A 1 102 ASP 102 183 183 ASP ASP A . n A 1 103 PHE 103 184 184 PHE PHE A . n A 1 104 VAL 104 185 185 VAL VAL A . n A 1 105 HIS 105 186 186 HIS HIS A . n A 1 106 PRO 106 187 187 PRO PRO A . n A 1 107 GLY 107 188 188 GLY GLY A . n A 1 108 HIS 108 189 189 HIS HIS A . n A 1 109 GLY 109 190 190 GLY GLY A . n A 1 110 ASP 110 191 191 ASP ASP A . n A 1 111 LEU 111 192 192 LEU LEU A . n A 1 112 SER 112 193 193 SER SER A . n A 1 113 GLY 113 194 194 GLY GLY A . n A 1 114 TRP 114 195 195 TRP TRP A . n A 1 115 ALA 115 196 196 ALA ALA A . n A 1 116 LYS 116 197 197 LYS LYS A . n A 1 117 GLN 117 198 198 GLN GLN A . n A 1 118 GLY 118 199 199 GLY GLY A . n A 1 119 VAL 119 200 200 VAL VAL A . n A 1 120 LEU 120 201 201 LEU LEU A . n A 1 121 LEU 121 202 202 LEU LEU A . n A 1 122 LEU 122 203 203 LEU LEU A . n A 1 123 ASN 123 204 204 ASN ASN A . n A 1 124 ALA 124 205 205 ALA ALA A . n A 1 125 VAL 125 206 206 VAL VAL A . n A 1 126 LEU 126 207 207 LEU LEU A . n A 1 127 THR 127 208 208 THR THR A . n A 1 128 VAL 128 209 209 VAL VAL A . n A 1 129 ARG 129 210 210 ARG ARG A . n A 1 130 ALA 130 211 211 ALA ALA A . n A 1 131 HIS 131 212 212 HIS HIS A . n A 1 132 GLN 132 213 213 GLN GLN A . n A 1 133 ALA 133 214 214 ALA ALA A . n A 1 134 ASN 134 215 215 ASN ASN A . n A 1 135 SER 135 216 216 SER SER A . n A 1 136 HIS 136 217 217 HIS HIS A . n A 1 137 LYS 137 218 218 LYS LYS A . n A 1 138 GLU 138 219 219 GLU GLU A . n A 1 139 ARG 139 220 220 ARG ARG A . n A 1 140 GLY 140 221 221 GLY GLY A . n A 1 141 TRP 141 222 222 TRP TRP A . n A 1 142 GLU 142 223 223 GLU GLU A . n A 1 143 GLN 143 224 224 GLN GLN A . n A 1 144 PHE 144 225 225 PHE PHE A . n A 1 145 THR 145 226 226 THR THR A . n A 1 146 ASP 146 227 227 ASP ASP A . n A 1 147 ALA 147 228 228 ALA ALA A . n A 1 148 VAL 148 229 229 VAL VAL A . n A 1 149 VAL 149 230 230 VAL VAL A . n A 1 150 SER 150 231 231 SER SER A . n A 1 151 TRP 151 232 232 TRP TRP A . n A 1 152 LEU 152 233 233 LEU LEU A . n A 1 153 ASN 153 234 234 ASN ASN A . n A 1 154 GLN 154 235 235 GLN GLN A . n A 1 155 ASN 155 236 236 ASN ASN A . n A 1 156 SER 156 237 237 SER SER A . n A 1 157 ASN 157 238 238 ASN ASN A . n A 1 158 GLY 158 239 239 GLY GLY A . n A 1 159 LEU 159 240 240 LEU LEU A . n A 1 160 VAL 160 241 241 VAL VAL A . n A 1 161 PHE 161 242 242 PHE PHE A . n A 1 162 LEU 162 243 243 LEU LEU A . n A 1 163 LEU 163 244 244 LEU LEU A . n A 1 164 TRP 164 245 245 TRP TRP A . n A 1 165 GLY 165 246 246 GLY GLY A . n A 1 166 SER 166 247 247 SER SER A . n A 1 167 TYR 167 248 248 TYR TYR A . n A 1 168 ALA 168 249 249 ALA ALA A . n A 1 169 GLN 169 250 250 GLN GLN A . n A 1 170 LYS 170 251 251 LYS LYS A . n A 1 171 LYS 171 252 252 LYS LYS A . n A 1 172 GLY 172 253 253 GLY GLY A . n A 1 173 SER 173 254 254 SER SER A . n A 1 174 ALA 174 255 255 ALA ALA A . n A 1 175 ILE 175 256 256 ILE ILE A . n A 1 176 ASP 176 257 257 ASP ASP A . n A 1 177 ARG 177 258 258 ARG ARG A . n A 1 178 LYS 178 259 259 LYS LYS A . n A 1 179 ARG 179 260 260 ARG ARG A . n A 1 180 HIS 180 261 261 HIS HIS A . n A 1 181 HIS 181 262 262 HIS HIS A . n A 1 182 VAL 182 263 263 VAL VAL A . n A 1 183 LEU 183 264 264 LEU LEU A . n A 1 184 GLN 184 265 265 GLN GLN A . n A 1 185 THR 185 266 266 THR THR A . n A 1 186 ALA 186 267 267 ALA ALA A . n A 1 187 HIS 187 268 268 HIS HIS A . n A 1 188 PRO 188 269 269 PRO PRO A . n A 1 189 SER 189 270 270 SER SER A . n A 1 190 PRO 190 271 271 PRO PRO A . n A 1 191 LEU 191 272 272 LEU LEU A . n A 1 192 SER 192 273 273 SER SER A . n A 1 193 VAL 193 274 274 VAL VAL A . n A 1 194 TYR 194 275 275 TYR TYR A . n A 1 195 ARG 195 276 276 ARG ARG A . n A 1 196 GLY 196 277 277 GLY GLY A . n A 1 197 PHE 197 278 278 PHE PHE A . n A 1 198 PHE 198 279 279 PHE PHE A . n A 1 199 GLY 199 280 280 GLY GLY A . n A 1 200 CYS 200 281 281 CYS CYS A . n A 1 201 ARG 201 282 282 ARG ARG A . n A 1 202 HIS 202 283 283 HIS HIS A . n A 1 203 PHE 203 284 284 PHE PHE A . n A 1 204 SER 204 285 285 SER SER A . n A 1 205 LYS 205 286 286 LYS LYS A . n A 1 206 THR 206 287 287 THR THR A . n A 1 207 ASN 207 288 288 ASN ASN A . n A 1 208 GLU 208 289 289 GLU GLU A . n A 1 209 LEU 209 290 290 LEU LEU A . n A 1 210 LEU 210 291 291 LEU LEU A . n A 1 211 GLN 211 292 292 GLN GLN A . n A 1 212 LYS 212 293 293 LYS LYS A . n A 1 213 SER 213 294 294 SER SER A . n A 1 214 GLY 214 295 295 GLY GLY A . n A 1 215 LYS 215 296 296 LYS LYS A . n A 1 216 LYS 216 297 297 LYS LYS A . n A 1 217 PRO 217 298 298 PRO PRO A . n A 1 218 ILE 218 299 299 ILE ILE A . n A 1 219 ASP 219 300 300 ASP ASP A . n A 1 220 TRP 220 301 301 TRP TRP A . n A 1 221 LYS 221 302 302 LYS LYS A . n A 1 222 GLU 222 303 303 GLU GLU A . n A 1 223 LEU 223 304 304 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 305 1 HOH HOH A . B 2 HOH 2 306 2 HOH HOH A . B 2 HOH 3 307 3 HOH HOH A . B 2 HOH 4 308 4 HOH HOH A . B 2 HOH 5 309 5 HOH HOH A . B 2 HOH 6 310 6 HOH HOH A . B 2 HOH 7 311 7 HOH HOH A . B 2 HOH 8 312 8 HOH HOH A . B 2 HOH 9 313 9 HOH HOH A . B 2 HOH 10 314 10 HOH HOH A . B 2 HOH 11 315 11 HOH HOH A . B 2 HOH 12 316 12 HOH HOH A . B 2 HOH 13 317 14 HOH HOH A . B 2 HOH 14 318 15 HOH HOH A . B 2 HOH 15 319 16 HOH HOH A . B 2 HOH 16 320 17 HOH HOH A . B 2 HOH 17 321 18 HOH HOH A . B 2 HOH 18 322 19 HOH HOH A . B 2 HOH 19 323 20 HOH HOH A . B 2 HOH 20 324 21 HOH HOH A . B 2 HOH 21 325 22 HOH HOH A . B 2 HOH 22 326 23 HOH HOH A . B 2 HOH 23 327 24 HOH HOH A . B 2 HOH 24 328 25 HOH HOH A . B 2 HOH 25 329 26 HOH HOH A . B 2 HOH 26 330 27 HOH HOH A . B 2 HOH 27 331 28 HOH HOH A . B 2 HOH 28 332 29 HOH HOH A . B 2 HOH 29 333 30 HOH HOH A . B 2 HOH 30 334 31 HOH HOH A . B 2 HOH 31 335 32 HOH HOH A . B 2 HOH 32 336 33 HOH HOH A . B 2 HOH 33 337 34 HOH HOH A . B 2 HOH 34 338 35 HOH HOH A . B 2 HOH 35 339 36 HOH HOH A . B 2 HOH 36 340 37 HOH HOH A . B 2 HOH 37 341 38 HOH HOH A . B 2 HOH 38 342 39 HOH HOH A . B 2 HOH 39 343 40 HOH HOH A . B 2 HOH 40 344 41 HOH HOH A . B 2 HOH 41 345 42 HOH HOH A . B 2 HOH 42 346 43 HOH HOH A . B 2 HOH 43 347 44 HOH HOH A . B 2 HOH 44 348 45 HOH HOH A . B 2 HOH 45 349 46 HOH HOH A . B 2 HOH 46 350 47 HOH HOH A . B 2 HOH 47 351 48 HOH HOH A . B 2 HOH 48 352 49 HOH HOH A . B 2 HOH 49 353 50 HOH HOH A . B 2 HOH 50 354 51 HOH HOH A . B 2 HOH 51 355 52 HOH HOH A . B 2 HOH 52 356 53 HOH HOH A . B 2 HOH 53 357 54 HOH HOH A . B 2 HOH 54 358 55 HOH HOH A . B 2 HOH 55 359 56 HOH HOH A . B 2 HOH 56 360 57 HOH HOH A . B 2 HOH 57 361 58 HOH HOH A . B 2 HOH 58 362 59 HOH HOH A . B 2 HOH 59 363 60 HOH HOH A . B 2 HOH 60 364 61 HOH HOH A . B 2 HOH 61 365 62 HOH HOH A . B 2 HOH 62 366 63 HOH HOH A . B 2 HOH 63 367 64 HOH HOH A . B 2 HOH 64 368 65 HOH HOH A . B 2 HOH 65 369 66 HOH HOH A . B 2 HOH 66 370 67 HOH HOH A . B 2 HOH 67 371 68 HOH HOH A . B 2 HOH 68 372 69 HOH HOH A . B 2 HOH 69 373 70 HOH HOH A . B 2 HOH 70 374 71 HOH HOH A . B 2 HOH 71 375 72 HOH HOH A . B 2 HOH 72 376 73 HOH HOH A . B 2 HOH 73 377 74 HOH HOH A . B 2 HOH 74 378 75 HOH HOH A . B 2 HOH 75 379 76 HOH HOH A . B 2 HOH 76 380 77 HOH HOH A . B 2 HOH 77 381 78 HOH HOH A . B 2 HOH 78 382 79 HOH HOH A . B 2 HOH 79 383 80 HOH HOH A . B 2 HOH 80 384 81 HOH HOH A . B 2 HOH 81 385 82 HOH HOH A . B 2 HOH 82 386 83 HOH HOH A . B 2 HOH 83 387 84 HOH HOH A . B 2 HOH 84 388 85 HOH HOH A . B 2 HOH 85 389 86 HOH HOH A . B 2 HOH 86 390 87 HOH HOH A . B 2 HOH 87 391 88 HOH HOH A . B 2 HOH 88 392 89 HOH HOH A . B 2 HOH 89 393 90 HOH HOH A . B 2 HOH 90 394 91 HOH HOH A . B 2 HOH 91 395 92 HOH HOH A . B 2 HOH 92 396 93 HOH HOH A . B 2 HOH 93 397 94 HOH HOH A . B 2 HOH 94 398 95 HOH HOH A . B 2 HOH 95 399 96 HOH HOH A . B 2 HOH 96 400 97 HOH HOH A . B 2 HOH 97 401 98 HOH HOH A . B 2 HOH 98 402 99 HOH HOH A . B 2 HOH 99 403 100 HOH HOH A . B 2 HOH 100 404 101 HOH HOH A . B 2 HOH 101 405 102 HOH HOH A . B 2 HOH 102 406 103 HOH HOH A . B 2 HOH 103 407 104 HOH HOH A . B 2 HOH 104 408 105 HOH HOH A . B 2 HOH 105 409 106 HOH HOH A . B 2 HOH 106 410 107 HOH HOH A . B 2 HOH 107 411 108 HOH HOH A . B 2 HOH 108 412 109 HOH HOH A . B 2 HOH 109 413 110 HOH HOH A . B 2 HOH 110 414 111 HOH HOH A . B 2 HOH 111 415 112 HOH HOH A . B 2 HOH 112 416 113 HOH HOH A . B 2 HOH 113 417 114 HOH HOH A . B 2 HOH 114 418 115 HOH HOH A . B 2 HOH 115 419 116 HOH HOH A . B 2 HOH 116 420 117 HOH HOH A . B 2 HOH 117 421 118 HOH HOH A . B 2 HOH 118 422 119 HOH HOH A . B 2 HOH 119 423 120 HOH HOH A . B 2 HOH 120 424 121 HOH HOH A . B 2 HOH 121 425 122 HOH HOH A . B 2 HOH 122 426 123 HOH HOH A . B 2 HOH 123 427 124 HOH HOH A . B 2 HOH 124 428 125 HOH HOH A . B 2 HOH 125 429 126 HOH HOH A . B 2 HOH 126 430 127 HOH HOH A . B 2 HOH 127 431 128 HOH HOH A . B 2 HOH 128 432 129 HOH HOH A . B 2 HOH 129 433 130 HOH HOH A . B 2 HOH 130 434 131 HOH HOH A . B 2 HOH 131 435 132 HOH HOH A . B 2 HOH 132 436 133 HOH HOH A . B 2 HOH 133 437 134 HOH HOH A . B 2 HOH 134 438 135 HOH HOH A . B 2 HOH 135 439 136 HOH HOH A . B 2 HOH 136 440 137 HOH HOH A . B 2 HOH 137 441 138 HOH HOH A . B 2 HOH 138 442 139 HOH HOH A . B 2 HOH 139 443 140 HOH HOH A . B 2 HOH 140 444 141 HOH HOH A . B 2 HOH 141 445 142 HOH HOH A . B 2 HOH 142 446 143 HOH HOH A . B 2 HOH 143 447 144 HOH HOH A . B 2 HOH 144 448 145 HOH HOH A . B 2 HOH 145 449 146 HOH HOH A . B 2 HOH 146 450 147 HOH HOH A . B 2 HOH 147 451 148 HOH HOH A . B 2 HOH 148 452 149 HOH HOH A . B 2 HOH 149 453 150 HOH HOH A . B 2 HOH 150 454 151 HOH HOH A . B 2 HOH 151 455 152 HOH HOH A . B 2 HOH 152 456 153 HOH HOH A . B 2 HOH 153 457 154 HOH HOH A . B 2 HOH 154 458 155 HOH HOH A . B 2 HOH 155 459 156 HOH HOH A . B 2 HOH 156 460 157 HOH HOH A . B 2 HOH 157 461 158 HOH HOH A . B 2 HOH 158 462 159 HOH HOH A . B 2 HOH 159 463 160 HOH HOH A . B 2 HOH 160 464 161 HOH HOH A . B 2 HOH 161 465 162 HOH HOH A . B 2 HOH 162 466 163 HOH HOH A . B 2 HOH 163 467 164 HOH HOH A . B 2 HOH 164 468 165 HOH HOH A . B 2 HOH 165 469 166 HOH HOH A . B 2 HOH 166 470 167 HOH HOH A . B 2 HOH 167 471 168 HOH HOH A . B 2 HOH 168 472 169 HOH HOH A . B 2 HOH 169 473 170 HOH HOH A . B 2 HOH 170 474 171 HOH HOH A . B 2 HOH 171 475 172 HOH HOH A . B 2 HOH 172 476 173 HOH HOH A . B 2 HOH 173 477 174 HOH HOH A . B 2 HOH 174 478 175 HOH HOH A . B 2 HOH 175 479 176 HOH HOH A . B 2 HOH 176 480 177 HOH HOH A . B 2 HOH 177 481 178 HOH HOH A . B 2 HOH 178 482 179 HOH HOH A . B 2 HOH 179 483 180 HOH HOH A . B 2 HOH 180 484 181 HOH HOH A . B 2 HOH 181 485 182 HOH HOH A . B 2 HOH 182 486 183 HOH HOH A . B 2 HOH 183 487 184 HOH HOH A . B 2 HOH 184 488 185 HOH HOH A . B 2 HOH 185 489 186 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASES phasing . ? 1 SQUASH phasing . ? 2 XTALVIEW refinement . ? 3 X-PLOR refinement 3.8 ? 4 DENZO 'data reduction' . ? 5 SCALEPACK 'data scaling' . ? 6 # _cell.entry_id 1AKZ _cell.length_a 47.760 _cell.length_b 55.270 _cell.length_c 84.970 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1AKZ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1AKZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_percent_sol 54. _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.9 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;100 MM IMIDAZOLE/MALEATE, PH 7.9, 1%-4% SATURATED NACL, 1%-4% SATURATED AMMONIUM SULFATE, 16%-20% PEG 4000, MIXED WITH EQUAL VOLUMES 30 MG/ML PROTEIN. ; # _diffrn.id 1 _diffrn.ambient_temp 275 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 1995-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.08 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL7-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL7-1 _diffrn_source.pdbx_wavelength 1.08 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1AKZ _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.57 _reflns.number_obs 30433 _reflns.number_all ? _reflns.percent_possible_obs 94.5 _reflns.pdbx_Rmerge_I_obs 0.0460000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.57 _reflns_shell.d_res_low 1.61 _reflns_shell.percent_possible_all 93.4 _reflns_shell.Rmerge_I_obs 0.1060000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 11.0 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1AKZ _refine.ls_number_reflns_obs 30381 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 100000.00 _refine.pdbx_data_cutoff_low_absF 0.1 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 1.57 _refine.ls_percent_reflns_obs 94.5 _refine.ls_R_factor_obs 0.1890000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1890000 _refine.ls_R_factor_R_free 0.2240000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.49 _refine.ls_number_reflns_R_free 3048 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 4.9022 _refine.aniso_B[2][2] 0.7885 _refine.aniso_B[3][3] -5.6908 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'AN OVERALL BULK SOLVENT CORRECTION WAS APPLIED TO THE DATA.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MULTIPLE ISOMORPHOUS REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1808 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 185 _refine_hist.number_atoms_total 1993 _refine_hist.d_res_high 1.57 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.154 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 23.96 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 0.949 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 0.958 1.5 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 1.649 2.0 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 1.746 2.0 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 2.812 2.5 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 1.57 _refine_ls_shell.d_res_low 1.64 _refine_ls_shell.number_reflns_R_work 3319 _refine_ls_shell.R_factor_R_work 0.3180000 _refine_ls_shell.percent_reflns_obs 93.7 _refine_ls_shell.R_factor_R_free 0.2860000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 9.85 _refine_ls_shell.number_reflns_R_free 390 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM19.SOL TOPH19.SOL 'X-RAY DIFFRACTION' 3 ? TOPH19.PEP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1AKZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1AKZ _struct.title 'HUMAN URACIL-DNA GLYCOSYLASE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1AKZ _struct_keywords.pdbx_keywords GLYCOSIDASE _struct_keywords.text 'GLYCOSYLASE, DNA REPAIR, URACIL REMOVAL FROM DNA, ALPHA/ BETA PROTEIN, GLYCOSIDASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UNG_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P13051 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MGVFCLGPWGLGRKLRTPGKGPLQLLSRLCGDHLQAIPAKKAPAGQEEPGTPPSSPLSAEQLDRIQRNKAAALLRLAARN VPVGFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSV QRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGL VFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1AKZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 223 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P13051 _struct_ref_seq.db_align_beg 85 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 304 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 85 _struct_ref_seq.pdbx_auth_seq_align_end 304 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 6 ? GLY A 17 ? GLU A 87 GLY A 98 1 ? 12 HELX_P HELX_P2 2 PRO A 19 ? HIS A 34 ? PRO A 100 HIS A 115 1 ? 16 HELX_P HELX_P3 3 PRO A 41 ? GLN A 43 ? PRO A 122 GLN A 124 5 ? 3 HELX_P HELX_P4 4 THR A 46 ? THR A 48 ? THR A 127 THR A 129 5 ? 3 HELX_P HELX_P5 5 ILE A 53 ? ASP A 55 ? ILE A 134 ASP A 136 5 ? 3 HELX_P HELX_P6 6 PRO A 87 ? ASP A 99 ? PRO A 168 ASP A 180 1 ? 13 HELX_P HELX_P7 7 SER A 112 ? GLN A 117 ? SER A 193 GLN A 198 1 ? 6 HELX_P HELX_P8 8 TRP A 141 ? ASN A 155 ? TRP A 222 ASN A 236 1 ? 15 HELX_P HELX_P9 9 SER A 166 ? ALA A 174 ? SER A 247 ALA A 255 1 ? 9 HELX_P HELX_P10 10 VAL A 193 ? ARG A 195 ? VAL A 274 ARG A 276 5 ? 3 HELX_P HELX_P11 11 HIS A 202 ? SER A 213 ? HIS A 283 SER A 294 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 38 A . ? TYR 119 A PRO 39 A ? PRO 120 A 1 -1.36 2 ARG 81 A . ? ARG 162 A PRO 82 A ? PRO 163 A 1 0.54 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 119 ? ASN A 123 ? VAL A 200 ASN A 204 A 2 VAL A 58 ? GLY A 62 ? VAL A 139 GLY A 143 A 3 VAL A 160 ? TRP A 164 ? VAL A 241 TRP A 245 A 4 HIS A 181 ? THR A 185 ? HIS A 262 THR A 266 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 120 ? O LEU A 201 N VAL A 58 ? N VAL A 139 A 2 3 O VAL A 59 ? O VAL A 140 N VAL A 160 ? N VAL A 241 A 3 4 O PHE A 161 ? O PHE A 242 N HIS A 181 ? N HIS A 262 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 144 ? ? -109.25 -71.94 2 1 HIS A 154 ? ? -140.45 25.56 3 1 PHE A 158 ? ? 67.34 -16.92 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 1AKZ _atom_sites.fract_transf_matrix[1][1] 0.020938 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018093 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011769 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_