data_1ALZ # _entry.id 1ALZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ALZ pdb_00001alz 10.2210/pdb1alz/pdb WWPDB D_1000170982 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 1998-03-04 _pdbx_database_PDB_obs_spr.pdb_id 1ALZ _pdbx_database_PDB_obs_spr.replace_pdb_id 1GMA _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1TK2 unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN S COMPLEXED WITH ALKALINE PROTEINASE SAVINASE' PDB 2XDC unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A FROM CRYSTALS GROWN IN A LIPID CUBIC PHASE.' PDB 1AV2 unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A COMPLEXED WITH CESIUM CHLORIDE' PDB 1BDW unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A FROM BACILLUS BREVIS' PDB 1C4D unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A COMPLEXED WITH CESIUM CHLORIDE' PDB 1GMK unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A COMPLRXED WITH POTASSIUM THIOCYANATE' PDB 1GRM unspecified 'SOLUTION STRUCTURE OF THE GRAMICIDIN A' PDB 1JNO unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A IN SODIUM DODECYL SULFATE MICELLES' PDB 1KQE unspecified 'SOLUTION STRUCTURE OF A LINKED SHORTENED GRAMICIDIN A IN BENZENE/ACETONE 10:1' PDB 1MAG unspecified 'SOLID STATE NMR STRUCTURE OF GRAMICIDIN A IN HYDRATED DMPC BILAYERS,' PDB 1MIC unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A IN METHANOL IN THE PRESENCE OF CACL' PDB 1NG8 unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A (W15G) IN SODIUM DODECYL SULFATE MICELLES' PDB 1NRM unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A IN DODECYL PHOSPHOCHOLINE MICELLES' PDB 1NRU unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A IN DODECYL PHOSPHOCHOLINE MICELLES IN THE PRESENCE OF EXCESS NA+' PDB 1NT5 unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A (V1F) IN SODIUM DODECYL SULFATE MICELLES' PDB 1JO3 unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN B IN SODIUM DODECYL SULFATE MICELLES' PDB 1JO4 unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN C IN SODIUM DODECYL SULFATE MICELLES' PDB 1NT6 unspecified 'SOLUTION STRUCTURE OF F1-GRAMICIDIN C IN SODIUM DODECYL SULFATE MICELLES' PDB 1TKQ unspecified 'SOLUTION STRUCTURE OF A LINKED UNSYMMETRIC GRAMICIDIN A IN A MEMBRANE-ISOELECTRICAL SOLVENTS MIXTURE, IN THE PRESENCE OF CSCL' PDB 1W5U unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D IN ETHANOL' PDB 2IZQ unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D COMPLEX WITH KI IN METHANOL' PDB 3L8L unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D COMPLEX WITH NAI' PDB 1AL4 unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D IN N-PROPANOL' PDB 1ALX unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D IN METHANOL' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ALZ _pdbx_database_status.recvd_initial_deposition_date 1997-06-06 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Burkhart, B.M.' 1 'Pangborn, W.A.' 2 'Duax, W.L.' 3 'Langs, D.A.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Heterodimer Formation and Crystal Nucleation of Gramicidin D' Biophys.J. 75 2135 ? 1998 BIOJAU US 0006-3495 0030 ? 9788907 '10.1016/S0006-3495(98)77656-8' 1 'Three-Dimensional Structure at 0.86 A of the Uncomplexed Form of the Transmembrane Ion Channel Peptide Gramicidin A.' Science 241 188 ? 1988 SCIEAS US 0036-8075 0038 ? 2455345 10.1126/SCIENCE.2455345 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Burkhart, B.M.' 1 ? primary 'Gassman, R.M.' 2 ? primary 'Langs, D.A.' 3 ? primary 'Pangborn, W.A.' 4 ? primary 'Duax, W.L.' 5 ? 1 'Langs, D.A.' 6 ? # _cell.entry_id 1ALZ _cell.length_a 31.595 _cell.length_b 32.369 _cell.length_c 24.219 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1ALZ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'ILE-GRAMICIDIN C' 1873.285 1 ? ? ? ? 2 polymer nat 'VAL-GRAMICIDIN A' 1882.294 1 ? ? ? ? 3 non-polymer syn ETHANOL 46.068 14 ? ? ? ? 4 water nat water 18.015 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes '(QIL)GA(DLE)A(DVA)V(DVA)W(DLE)Y(DLE)W(DLE)W(ETA)' XGALAVVVWLYLWLWX A ? 2 'polypeptide(L)' no yes '(FVA)GA(DLE)A(DVA)V(DVA)W(DLE)W(DLE)W(DLE)W(ETA)' VGALAVVVWLWLWLWX B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 QIL y 1 1 FVA y 1 2 GLY n 1 3 ALA n 1 4 DLE n 1 5 ALA n 1 6 DVA n 1 7 VAL n 1 8 DVA n 1 9 TRP n 1 10 DLE n 1 11 TYR y 1 11 TRP y 1 12 DLE n 1 13 TRP n 1 14 DLE n 1 15 TRP n 1 16 ETA n 2 1 FVA n 2 2 GLY n 2 3 ALA n 2 4 DLE n 2 5 ALA n 2 6 DVA n 2 7 VAL n 2 8 DVA n 2 9 TRP n 2 10 DLE n 2 11 TRP n 2 12 DLE n 2 13 TRP n 2 14 DLE n 2 15 TRP n 2 16 ETA n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ? 'BREVIBACILLUS BREVIS' 1393 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? 'BREVIBACILLUS BREVIS' 1393 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 NOR NOR00248 1 ? ? NOR00248 ? 2 NOR NOR00243 2 ? ? NOR00243 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ALZ A 1 ? 16 ? NOR00248 1 ? 16 ? 1 16 2 2 1ALZ B 1 ? 16 ? NOR00243 1 ? 16 ? 1 16 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1ALZ FVA A 1 ? NOR NOR00248 QIL 1 microheterogeneity 1 1 1 1ALZ TYR A 11 ? NOR NOR00248 TRP 11 microheterogeneity 11 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 DLE 'D-peptide linking' . D-LEUCINE ? 'C6 H13 N O2' 131.173 DVA 'D-peptide linking' . D-VALINE ? 'C5 H11 N O2' 117.146 EOH non-polymer . ETHANOL ? 'C2 H6 O' 46.068 ETA 'L-peptide COOH carboxy terminus' . ETHANOLAMINE ? 'C2 H7 N O' 61.083 FVA 'L-peptide linking' n N-formyl-L-valine ? 'C6 H11 N O3' 145.156 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 QIL 'L-peptide linking' n N-formyl-L-isoleucine ? 'C7 H13 N O3' 159.183 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1ALZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.76 _exptl_crystal.density_percent_sol 30.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'CRYSTALLIZED BY BATCH METHODS FROM A SATURATED SOLUTION OF GRAMICIDIN D IN ETHANOL., PH 7.0, BATCH METHOD' # _diffrn.id 1 _diffrn.ambient_temp 120 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SIEMENS _diffrn_detector.pdbx_collection_date 1987-01 _diffrn_detector.details COLLIMATOR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE(002)' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'SEALED TUBE' _diffrn_source.type OTHER _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1ALZ _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100.000 _reflns.d_resolution_high 0.860 _reflns.number_obs 21454 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.04300 _reflns.pdbx_Rsym_value 0.04300 _reflns.pdbx_netI_over_sigmaI 5.1000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 1.100 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 0.86 _reflns_shell.d_res_low 0.90 _reflns_shell.percent_possible_all 93.6 _reflns_shell.Rmerge_I_obs 0.04300 _reflns_shell.pdbx_Rsym_value 0.04300 _reflns_shell.meanI_over_sigI_obs 1.200 _reflns_shell.pdbx_redundancy 1.10 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1ALZ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 21454 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 100.00 _refine.ls_d_res_high 0.86 _refine.ls_percent_reflns_obs 99.2 _refine.ls_R_factor_obs 0.162 _refine.ls_R_factor_all 0.162 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.185 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1033 _refine.ls_number_parameters 3464 _refine.ls_number_restraints 5742 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'MOEWS & KRETSINGER (G = 0.22140 U = 1.29472)' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'DIRECT METHODS, FOURIER RECYCLING' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case 'MODIFIED ENGH AND HUBER FOR ETHANOLAMINE BASED ON SERINE' _refine.pdbx_R_Free_selection_details '5% OF REFLECTIONS IN THIN RESOLUTION SHELLS.' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 1ALZ _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 5 _refine_analyze.occupancy_sum_hydrogen 365.06 _refine_analyze.occupancy_sum_non_hydrogen 312.16 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 294 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 337 _refine_hist.d_res_high 0.86 _refine_hist.d_res_low 100.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.016 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.032 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist ? ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.339 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.114 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.113 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr ? ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.030 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.036 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 1ALZ _pdbx_refine.R_factor_all_no_cutoff 0.162 _pdbx_refine.R_factor_obs_no_cutoff 0.162 _pdbx_refine.free_R_factor_no_cutoff 0.185 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.000 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 1033 _pdbx_refine.R_factor_all_4sig_cutoff 0.108 _pdbx_refine.R_factor_obs_4sig_cutoff 0.108 _pdbx_refine.free_R_factor_4sig_cutoff 0.131 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.000 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 484 _pdbx_refine.number_reflns_obs_4sig_cutoff 10782 # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.867230 _struct_ncs_oper.matrix[1][2] 0.158400 _struct_ncs_oper.matrix[1][3] 0.472030 _struct_ncs_oper.matrix[2][1] 0.158670 _struct_ncs_oper.matrix[2][2] -0.986540 _struct_ncs_oper.matrix[2][3] 0.039550 _struct_ncs_oper.matrix[3][1] 0.471940 _struct_ncs_oper.matrix[3][2] 0.040600 _struct_ncs_oper.matrix[3][3] -0.880690 _struct_ncs_oper.vector[1] -8.48000 _struct_ncs_oper.vector[2] 64.92000 _struct_ncs_oper.vector[3] 11.57000 # _struct.entry_id 1ALZ _struct.title 'GRAMICIDIN D FROM BACILLUS BREVIS (ETHANOL SOLVATE)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ALZ _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'GRAMICIDIN, ANTIFUNGAL, ANTIBIOTIC, ANTIBACTERIAL, MEMBRANE ION CHANNEL, LINEAR GRAMICIDIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A FVA 1 C B ? ? 1_555 A GLY 2 N ? ? A FVA 1 A GLY 2 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale2 covale both ? A QIL 1 C A ? ? 1_555 A GLY 2 N ? ? A QIL 1 A GLY 2 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale3 covale both ? A ALA 3 C ? ? ? 1_555 A DLE 4 N ? ? A ALA 3 A DLE 4 1_555 ? ? ? ? ? ? ? 1.314 ? ? covale4 covale both ? A DLE 4 C ? ? ? 1_555 A ALA 5 N ? ? A DLE 4 A ALA 5 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale5 covale both ? A ALA 5 C ? ? ? 1_555 A DVA 6 N ? ? A ALA 5 A DVA 6 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale6 covale both ? A DVA 6 C ? ? ? 1_555 A VAL 7 N ? ? A DVA 6 A VAL 7 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale7 covale both ? A VAL 7 C ? ? ? 1_555 A DVA 8 N ? ? A VAL 7 A DVA 8 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale8 covale both ? A DVA 8 C ? ? ? 1_555 A TRP 9 N ? ? A DVA 8 A TRP 9 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale9 covale both ? A TRP 9 C ? ? ? 1_555 A DLE 10 N ? ? A TRP 9 A DLE 10 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale10 covale both ? A DLE 10 C ? ? ? 1_555 A TRP 11 N B ? A DLE 10 A TRP 11 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale11 covale both ? A DLE 10 C ? ? ? 1_555 A TYR 11 N A ? A DLE 10 A TYR 11 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale12 covale both ? A TYR 11 C A ? ? 1_555 A DLE 12 N ? ? A TYR 11 A DLE 12 1_555 ? ? ? ? ? ? ? 1.277 ? ? covale13 covale both ? A TRP 11 C B ? ? 1_555 A DLE 12 N ? ? A TRP 11 A DLE 12 1_555 ? ? ? ? ? ? ? 1.310 ? ? covale14 covale both ? A DLE 12 C ? ? ? 1_555 A TRP 13 N ? ? A DLE 12 A TRP 13 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale15 covale both ? A TRP 13 C ? ? ? 1_555 A DLE 14 N ? ? A TRP 13 A DLE 14 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale16 covale both ? A DLE 14 C ? ? ? 1_555 A TRP 15 N ? ? A DLE 14 A TRP 15 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale17 covale both ? A TRP 15 C ? ? ? 1_555 A ETA 16 N ? ? A TRP 15 A ETA 16 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale18 covale both ? B FVA 1 C ? ? ? 1_555 B GLY 2 N ? ? B FVA 1 B GLY 2 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale19 covale both ? B ALA 3 C ? ? ? 1_555 B DLE 4 N ? ? B ALA 3 B DLE 4 1_555 ? ? ? ? ? ? ? 1.311 ? ? covale20 covale both ? B DLE 4 C ? ? ? 1_555 B ALA 5 N ? ? B DLE 4 B ALA 5 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale21 covale both ? B ALA 5 C ? ? ? 1_555 B DVA 6 N ? ? B ALA 5 B DVA 6 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale22 covale both ? B DVA 6 C ? ? ? 1_555 B VAL 7 N ? ? B DVA 6 B VAL 7 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale23 covale both ? B VAL 7 C ? ? ? 1_555 B DVA 8 N ? ? B VAL 7 B DVA 8 1_555 ? ? ? ? ? ? ? 1.310 ? ? covale24 covale both ? B DVA 8 C ? ? ? 1_555 B TRP 9 N ? ? B DVA 8 B TRP 9 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale25 covale both ? B TRP 9 C ? ? ? 1_555 B DLE 10 N ? ? B TRP 9 B DLE 10 1_555 ? ? ? ? ? ? ? 1.302 ? ? covale26 covale both ? B DLE 10 C ? ? ? 1_555 B TRP 11 N B ? B DLE 10 B TRP 11 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale27 covale both ? B DLE 10 C ? ? ? 1_555 B TRP 11 N A ? B DLE 10 B TRP 11 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale28 covale both ? B TRP 11 C B ? ? 1_555 B DLE 12 N ? ? B TRP 11 B DLE 12 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale29 covale both ? B TRP 11 C A ? ? 1_555 B DLE 12 N ? ? B TRP 11 B DLE 12 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale30 covale both ? B DLE 12 C ? ? ? 1_555 B TRP 13 N ? ? B DLE 12 B TRP 13 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale31 covale both ? B TRP 13 C ? ? ? 1_555 B DLE 14 N ? ? B TRP 13 B DLE 14 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale32 covale both ? B DLE 14 C ? ? ? 1_555 B TRP 15 N ? ? B DLE 14 B TRP 15 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale33 covale both ? B TRP 15 C ? ? ? 1_555 B ETA 16 N ? ? B TRP 15 B ETA 16 1_555 ? ? ? ? ? ? ? 1.328 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLY A 2 ? DLE A 14 ? GLY A 2 DLE A 14 AA 2 GLY B 2 ? DLE B 14 ? GLY B 2 DLE B 14 # _pdbx_struct_sheet_hbond.sheet_id AA _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id TRP _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 13 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id TRP _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 13 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ALA _pdbx_struct_sheet_hbond.range_2_label_asym_id B _pdbx_struct_sheet_hbond.range_2_label_seq_id 3 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ALA _pdbx_struct_sheet_hbond.range_2_auth_asym_id B _pdbx_struct_sheet_hbond.range_2_auth_seq_id 3 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EOH 501 ? 5 'BINDING SITE FOR RESIDUE EOH A 501' AC2 Software A EOH 504 ? 8 'BINDING SITE FOR RESIDUE EOH A 504' AC3 Software A EOH 505 ? 6 'BINDING SITE FOR RESIDUE EOH A 505' AC4 Software A EOH 507 ? 5 'BINDING SITE FOR RESIDUE EOH A 507' AC5 Software A EOH 509 ? 6 'BINDING SITE FOR RESIDUE EOH A 509' AC6 Software A EOH 510 ? 4 'BINDING SITE FOR RESIDUE EOH A 510' AC7 Software A EOH 511 ? 8 'BINDING SITE FOR RESIDUE EOH A 511' AC8 Software A EOH 512 ? 4 'BINDING SITE FOR RESIDUE EOH A 512' AC9 Software A EOH 513 ? 6 'BINDING SITE FOR RESIDUE EOH A 513' BC1 Software A EOH 514 ? 11 'BINDING SITE FOR RESIDUE EOH A 514' BC2 Software B EOH 502 ? 4 'BINDING SITE FOR RESIDUE EOH B 502' BC3 Software B EOH 503 ? 3 'BINDING SITE FOR RESIDUE EOH B 503' BC4 Software B EOH 506 ? 7 'BINDING SITE FOR RESIDUE EOH B 506' BC5 Software B EOH 508 ? 4 'BINDING SITE FOR RESIDUE EOH B 508' BC6 Software ? ? ? ? 44 'BINDING SITE FOR CHAIN A OF ILE-GRAMICIDIN C' BC7 Software ? ? ? ? 43 'BINDING SITE FOR CHAIN B OF VAL-GRAMICIDIN A' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLY A 2 ? GLY A 2 . ? 1_555 ? 2 AC1 5 EOH H . ? EOH A 510 . ? 1_555 ? 3 AC1 5 EOH I . ? EOH A 511 . ? 1_555 ? 4 AC1 5 EOH J . ? EOH A 512 . ? 1_555 ? 5 AC1 5 DLE B 10 ? DLE B 10 . ? 4_566 ? 6 AC2 8 DLE A 4 ? DLE A 4 . ? 1_555 ? 7 AC2 8 EOH K . ? EOH A 513 . ? 1_555 ? 8 AC2 8 EOH L . ? EOH A 514 . ? 4_466 ? 9 AC2 8 TRP B 9 ? TRP B 9 . ? 3_645 ? 10 AC2 8 TRP B 13 ? TRP B 13 . ? 4_466 ? 11 AC2 8 TRP B 15 ? TRP B 15 . ? 1_555 ? 12 AC2 8 ETA B 16 ? ETA B 16 . ? 1_555 ? 13 AC2 8 EOH O . ? EOH B 506 . ? 1_545 ? 14 AC3 6 TRP A 9 ? TRP A 9 . ? 3_646 ? 15 AC3 6 TRP A 15 ? TRP A 15 . ? 1_545 ? 16 AC3 6 ETA A 16 ? ETA A 16 . ? 1_545 ? 17 AC3 6 EOH G . ? EOH A 509 . ? 1_545 ? 18 AC3 6 EOH K . ? EOH A 513 . ? 1_555 ? 19 AC3 6 TRP B 13 ? TRP B 13 . ? 4_466 ? 20 AC4 5 DLE A 4 ? DLE A 4 . ? 3_656 ? 21 AC4 5 TRP A 9 ? TRP A 9 . ? 1_555 ? 22 AC4 5 DLE A 10 ? DLE A 10 . ? 1_555 ? 23 AC4 5 DLE A 12 ? DLE A 12 . ? 4_476 ? 24 AC4 5 EOH H . ? EOH A 510 . ? 4_466 ? 25 AC5 6 VAL A 7 ? VAL A 7 . ? 4_476 ? 26 AC5 6 DVA A 8 ? DVA A 8 . ? 3_656 ? 27 AC5 6 TRP A 9 ? TRP A 9 . ? 3_656 ? 28 AC5 6 TRP A 15 ? TRP A 15 . ? 1_555 ? 29 AC5 6 EOH E . ? EOH A 505 . ? 1_565 ? 30 AC5 6 DLE B 12 ? DLE B 12 . ? 3_656 ? 31 AC6 4 TRP A 13 ? TRP A 13 . ? 1_545 ? 32 AC6 4 EOH C . ? EOH A 501 . ? 1_555 ? 33 AC6 4 EOH F . ? EOH A 507 . ? 4_566 ? 34 AC6 4 EOH I . ? EOH A 511 . ? 1_555 ? 35 AC7 8 TRP A 13 ? TRP A 13 . ? 1_545 ? 36 AC7 8 DLE A 14 ? DLE A 14 . ? 1_545 ? 37 AC7 8 EOH C . ? EOH A 501 . ? 1_555 ? 38 AC7 8 EOH H . ? EOH A 510 . ? 1_555 ? 39 AC7 8 EOH J . ? EOH A 512 . ? 1_555 ? 40 AC7 8 HOH Q . ? HOH A 2001 . ? 4_566 ? 41 AC7 8 GLY B 2 ? GLY B 2 . ? 1_545 ? 42 AC7 8 DLE B 10 ? DLE B 10 . ? 4_566 ? 43 AC8 4 GLY A 2 ? GLY A 2 . ? 1_555 ? 44 AC8 4 EOH C . ? EOH A 501 . ? 1_555 ? 45 AC8 4 EOH I . ? EOH A 511 . ? 1_555 ? 46 AC8 4 EOH L . ? EOH A 514 . ? 1_555 ? 47 AC9 6 ETA A 16 ? ETA A 16 . ? 1_545 ? 48 AC9 6 EOH D . ? EOH A 504 . ? 1_555 ? 49 AC9 6 EOH E . ? EOH A 505 . ? 1_555 ? 50 AC9 6 EOH L . ? EOH A 514 . ? 4_466 ? 51 AC9 6 TRP B 13 ? TRP B 13 . ? 4_466 ? 52 AC9 6 ETA B 16 ? ETA B 16 . ? 1_555 ? 53 BC1 11 ALA A 5 ? ALA A 5 . ? 4_566 ? 54 BC1 11 VAL A 7 ? VAL A 7 . ? 1_555 ? 55 BC1 11 DVA A 8 ? DVA A 8 . ? 1_555 ? 56 BC1 11 EOH D . ? EOH A 504 . ? 4_566 ? 57 BC1 11 EOH J . ? EOH A 512 . ? 1_555 ? 58 BC1 11 EOH K . ? EOH A 513 . ? 4_566 ? 59 BC1 11 TRP B 9 ? TRP B 9 . ? 2_675 ? 60 BC1 11 TRP B 11 ? TRP B 11 . ? 4_566 ? 61 BC1 11 TRP B 13 ? TRP B 13 . ? 1_555 ? 62 BC1 11 EOH O . ? EOH B 506 . ? 4_576 ? 63 BC1 11 EOH P . ? EOH B 508 . ? 4_576 ? 64 BC2 4 TRP A 15 ? TRP A 15 . ? 1_555 ? 65 BC2 4 ETA A 16 ? ETA A 16 . ? 1_555 ? 66 BC2 4 DLE B 4 ? DLE B 4 . ? 1_555 ? 67 BC2 4 EOH P . ? EOH B 508 . ? 1_555 ? 68 BC3 3 ETA A 16 ? ETA A 16 . ? 1_555 ? 69 BC3 3 HOH Q . ? HOH A 2001 . ? 3_655 ? 70 BC3 3 TRP B 15 ? TRP B 15 . ? 1_565 ? 71 BC4 7 TYR A 11 ? TYR A 11 . ? 3_655 ? 72 BC4 7 ETA A 16 ? ETA A 16 . ? 1_555 ? 73 BC4 7 EOH D . ? EOH A 504 . ? 1_565 ? 74 BC4 7 EOH L . ? EOH A 514 . ? 4_476 ? 75 BC4 7 TRP B 9 ? TRP B 9 . ? 3_655 ? 76 BC4 7 DLE B 10 ? DLE B 10 . ? 3_655 ? 77 BC4 7 EOH P . ? EOH B 508 . ? 1_555 ? 78 BC5 4 EOH L . ? EOH A 514 . ? 4_476 ? 79 BC5 4 TRP B 13 ? TRP B 13 . ? 4_476 ? 80 BC5 4 EOH M . ? EOH B 502 . ? 1_555 ? 81 BC5 4 EOH O . ? EOH B 506 . ? 1_555 ? 82 BC6 44 EOH C . ? EOH A 501 . ? 1_555 ? 83 BC6 44 EOH D . ? EOH A 504 . ? 1_555 ? 84 BC6 44 EOH E . ? EOH A 505 . ? 3_656 ? 85 BC6 44 EOH E . ? EOH A 505 . ? 1_565 ? 86 BC6 44 EOH F . ? EOH A 507 . ? 3_646 ? 87 BC6 44 EOH F . ? EOH A 507 . ? 1_555 ? 88 BC6 44 EOH F . ? EOH A 507 . ? 4_576 ? 89 BC6 44 EOH G . ? EOH A 509 . ? 1_555 ? 90 BC6 44 EOH G . ? EOH A 509 . ? 4_576 ? 91 BC6 44 EOH G . ? EOH A 509 . ? 3_646 ? 92 BC6 44 EOH H . ? EOH A 510 . ? 1_555 ? 93 BC6 44 EOH H . ? EOH A 510 . ? 1_565 ? 94 BC6 44 EOH I . ? EOH A 511 . ? 1_565 ? 95 BC6 44 EOH J . ? EOH A 512 . ? 1_555 ? 96 BC6 44 EOH K . ? EOH A 513 . ? 1_565 ? 97 BC6 44 EOH L . ? EOH A 514 . ? 4_466 ? 98 BC6 44 EOH L . ? EOH A 514 . ? 1_555 ? 99 BC6 44 HOH Q . ? HOH A 2001 . ? 1_555 ? 100 BC6 44 GLY B 2 ? GLY B 2 . ? 1_555 ? 101 BC6 44 GLY B 2 ? GLY B 2 . ? 1_545 ? 102 BC6 44 ALA B 3 ? ALA B 3 . ? 1_555 ? 103 BC6 44 ALA B 3 ? ALA B 3 . ? 1_545 ? 104 BC6 44 DLE B 4 ? DLE B 4 . ? 1_555 ? 105 BC6 44 ALA B 5 ? ALA B 5 . ? 1_555 ? 106 BC6 44 ALA B 5 ? ALA B 5 . ? 4_576 ? 107 BC6 44 DVA B 6 ? DVA B 6 . ? 1_555 ? 108 BC6 44 VAL B 7 ? VAL B 7 . ? 1_555 ? 109 BC6 44 DVA B 8 ? DVA B 8 . ? 1_555 ? 110 BC6 44 TRP B 9 ? TRP B 9 . ? 1_555 ? 111 BC6 44 DLE B 10 ? DLE B 10 . ? 1_555 ? 112 BC6 44 TRP B 11 ? TRP B 11 . ? 4_566 ? 113 BC6 44 TRP B 11 ? TRP B 11 . ? 3_656 ? 114 BC6 44 TRP B 11 ? TRP B 11 . ? 1_555 ? 115 BC6 44 DLE B 12 ? DLE B 12 . ? 1_555 ? 116 BC6 44 TRP B 13 ? TRP B 13 . ? 1_555 ? 117 BC6 44 DLE B 14 ? DLE B 14 . ? 1_555 ? 118 BC6 44 TRP B 15 ? TRP B 15 . ? 2_675 ? 119 BC6 44 TRP B 15 ? TRP B 15 . ? 3_655 ? 120 BC6 44 TRP B 15 ? TRP B 15 . ? 1_555 ? 121 BC6 44 ETA B 16 ? ETA B 16 . ? 1_555 ? 122 BC6 44 EOH M . ? EOH B 502 . ? 1_555 ? 123 BC6 44 EOH N . ? EOH B 503 . ? 1_555 ? 124 BC6 44 EOH O . ? EOH B 506 . ? 1_555 ? 125 BC6 44 EOH O . ? EOH B 506 . ? 3_645 ? 126 BC7 43 GLY A 2 ? GLY A 2 . ? 1_555 ? 127 BC7 43 GLY A 2 ? GLY A 2 . ? 1_565 ? 128 BC7 43 ALA A 3 ? ALA A 3 . ? 1_555 ? 129 BC7 43 ALA A 3 ? ALA A 3 . ? 1_565 ? 130 BC7 43 DLE A 4 ? DLE A 4 . ? 1_555 ? 131 BC7 43 ALA A 5 ? ALA A 5 . ? 1_555 ? 132 BC7 43 DVA A 6 ? DVA A 6 . ? 1_555 ? 133 BC7 43 VAL A 7 ? VAL A 7 . ? 1_555 ? 134 BC7 43 DVA A 8 ? DVA A 8 . ? 1_555 ? 135 BC7 43 TRP A 9 ? TRP A 9 . ? 1_555 ? 136 BC7 43 DLE A 10 ? DLE A 10 . ? 1_555 ? 137 BC7 43 TYR A 11 ? TYR A 11 . ? 1_555 ? 138 BC7 43 TYR A 11 ? TYR A 11 . ? 3_645 ? 139 BC7 43 DLE A 12 ? DLE A 12 . ? 1_555 ? 140 BC7 43 TRP A 13 ? TRP A 13 . ? 2_674 ? 141 BC7 43 TRP A 13 ? TRP A 13 . ? 4_476 ? 142 BC7 43 TRP A 13 ? TRP A 13 . ? 1_555 ? 143 BC7 43 DLE A 14 ? DLE A 14 . ? 1_555 ? 144 BC7 43 DLE A 14 ? DLE A 14 . ? 2_674 ? 145 BC7 43 TRP A 15 ? TRP A 15 . ? 1_555 ? 146 BC7 43 TRP A 15 ? TRP A 15 . ? 3_646 ? 147 BC7 43 ETA A 16 ? ETA A 16 . ? 1_555 ? 148 BC7 43 EOH C . ? EOH A 501 . ? 4_466 ? 149 BC7 43 EOH D . ? EOH A 504 . ? 3_655 ? 150 BC7 43 EOH D . ? EOH A 504 . ? 4_566 ? 151 BC7 43 EOH D . ? EOH A 504 . ? 1_555 ? 152 BC7 43 EOH E . ? EOH A 505 . ? 1_565 ? 153 BC7 43 EOH E . ? EOH A 505 . ? 4_566 ? 154 BC7 43 EOH F . ? EOH A 507 . ? 3_656 ? 155 BC7 43 EOH G . ? EOH A 509 . ? 3_646 ? 156 BC7 43 EOH I . ? EOH A 511 . ? 1_565 ? 157 BC7 43 EOH I . ? EOH A 511 . ? 4_466 ? 158 BC7 43 EOH J . ? EOH A 512 . ? 1_565 ? 159 BC7 43 EOH K . ? EOH A 513 . ? 1_555 ? 160 BC7 43 EOH K . ? EOH A 513 . ? 4_566 ? 161 BC7 43 EOH K . ? EOH A 513 . ? 1_565 ? 162 BC7 43 EOH L . ? EOH A 514 . ? 1_555 ? 163 BC7 43 EOH L . ? EOH A 514 . ? 4_466 ? 164 BC7 43 EOH L . ? EOH A 514 . ? 2_674 ? 165 BC7 43 EOH M . ? EOH B 502 . ? 1_555 ? 166 BC7 43 EOH N . ? EOH B 503 . ? 1_545 ? 167 BC7 43 EOH O . ? EOH B 506 . ? 3_645 ? 168 BC7 43 EOH P . ? EOH B 508 . ? 4_576 ? # _database_PDB_matrix.entry_id 1ALZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1ALZ _atom_sites.fract_transf_matrix[1][1] 0.031651 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.030894 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.041290 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 QIL 1 1 1 QIL QIL A . y A 1 1 FVA 1 1 1 FVA FVA A . y A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 DLE 4 4 4 DLE DLE A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 DVA 6 6 6 DVA DVA A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 DVA 8 8 8 DVA DVA A . n A 1 9 TRP 9 9 9 TRP TRP A . n A 1 10 DLE 10 10 10 DLE DLE A . n A 1 11 TYR 11 11 11 TYR TYR A . y A 1 11 TRP 11 11 11 TRP TRP A . y A 1 12 DLE 12 12 12 DLE DLE A . n A 1 13 TRP 13 13 13 TRP TRP A . n A 1 14 DLE 14 14 14 DLE DLE A . n A 1 15 TRP 15 15 15 TRP TRP A . n A 1 16 ETA 16 16 16 ETA ETA A . n B 2 1 FVA 1 1 1 FVA FVA B . n B 2 2 GLY 2 2 2 GLY GLY B . n B 2 3 ALA 3 3 3 ALA ALA B . n B 2 4 DLE 4 4 4 DLE DLE B . n B 2 5 ALA 5 5 5 ALA ALA B . n B 2 6 DVA 6 6 6 DVA DVA B . n B 2 7 VAL 7 7 7 VAL VAL B . n B 2 8 DVA 8 8 8 DVA DVA B . n B 2 9 TRP 9 9 9 TRP TRP B . n B 2 10 DLE 10 10 10 DLE DLE B . n B 2 11 TRP 11 11 11 TRP TRP B . n B 2 12 DLE 12 12 12 DLE DLE B . n B 2 13 TRP 13 13 13 TRP TRP B . n B 2 14 DLE 14 14 14 DLE DLE B . n B 2 15 TRP 15 15 15 TRP TRP B . n B 2 16 ETA 16 16 16 ETA ETA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EOH 1 501 501 EOH EOH A . D 3 EOH 1 504 504 EOH EOH A . E 3 EOH 1 505 505 EOH EOH A . F 3 EOH 1 507 507 EOH EOH A . G 3 EOH 1 509 509 EOH EOH A . H 3 EOH 1 510 510 EOH EOH A . I 3 EOH 1 511 511 EOH EOH A . J 3 EOH 1 512 512 EOH EOH A . K 3 EOH 1 513 513 EOH EOH A . L 3 EOH 1 514 514 EOH EOH A . M 3 EOH 1 502 502 EOH EOH B . N 3 EOH 1 503 503 EOH EOH B . O 3 EOH 1 506 506 EOH EOH B . P 3 EOH 1 508 508 EOH EOH B . Q 4 HOH 1 2001 2001 HOH HOH A . # loop_ _pdbx_molecule_features.prd_id _pdbx_molecule_features.name _pdbx_molecule_features.type _pdbx_molecule_features.class _pdbx_molecule_features.details PRD_000150 'GRAMICIDIN A' Polypeptide Antibiotic ;GRAMICIDIN A IS A HEXADECAMERIC HELICAL PEPTIDE WITH ALTERNATING D,L CHARACTERISTICS. THE N-TERM IS FORMYLATED (RESIDUE 0). THE C-TERM IS CAPPED WITH ETHANOLAMINE (RESIDUE 16). ; PRD_000153 'GRAMICIDIN C' Polypeptide Antibiotic ;GRAMICIDIN C IS A HEXADECAMERIC HELICAL PEPTIDE WITH ALTERNATING D,L CHARACTERISTICS. THE N-TERM IS FORMYLATED (RESIDUE 0). THE C-TERM IS CAPPED WITH ETHANOLAMINE (RESIDUE 16). ; # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_000150 B 2 PRD_000153 A # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2780 ? 1 MORE -0.0 ? 1 'SSA (A^2)' 5160 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-03-04 2 'Structure model' 1 1 2011-06-14 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-07-27 5 'Structure model' 1 4 2012-12-12 6 'Structure model' 1 5 2018-04-04 7 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Non-polymer description' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' Other 9 6 'Structure model' 'Data collection' 10 6 'Structure model' Other 11 7 'Structure model' 'Atomic model' 12 7 'Structure model' 'Data collection' 13 7 'Structure model' 'Database references' 14 7 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 6 'Structure model' diffrn_source 2 6 'Structure model' pdbx_database_status 3 7 'Structure model' atom_site 4 7 'Structure model' atom_site_anisotrop 5 7 'Structure model' chem_comp_atom 6 7 'Structure model' chem_comp_bond 7 7 'Structure model' database_2 8 7 'Structure model' struct_conn 9 7 'Structure model' struct_ref_seq_dif 10 7 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_diffrn_source.type' 2 6 'Structure model' '_pdbx_database_status.process_site' 3 7 'Structure model' '_atom_site.auth_atom_id' 4 7 'Structure model' '_atom_site.label_atom_id' 5 7 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 6 7 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 7 7 'Structure model' '_database_2.pdbx_DOI' 8 7 'Structure model' '_database_2.pdbx_database_accession' 9 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 10 7 'Structure model' '_struct_ref_seq_dif.details' 11 7 'Structure model' '_struct_site.pdbx_auth_asym_id' 12 7 'Structure model' '_struct_site.pdbx_auth_comp_id' 13 7 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXL-97 'model building' . ? 1 SHELXL-97 refinement . ? 2 SIEMENS 'data reduction' . ? 3 SIEMENS 'data scaling' . ? 4 SHELXL-97 phasing . ? 5 # _pdbx_entry_details.entry_id 1ALZ _pdbx_entry_details.compound_details ;GRAMICIDIN IS A HETEROGENEOUS MIXTURE OF SEVERAL COMPOUNDS INCLUDING GRAMICIDIN A, B AND C WHICH ARE OBTAINED FROM BACILLUS BREVIS AND CALLED COLLECTIVELY GRAMICIDIN D HERE, GRAMICIDIN A AND C ARE REPRESENTED BY THE SEQUENCE (SEQRES) ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE SEQUENCE IS FOR THE MAJOR COMPONENT GRAMICIDIN C (QIL1 AND TRP11) WHILE THE MINOR COMPONENT (FVA1 AND TYR11) IS REPRESENTED IN SEQADV WITH MICROHETEROGENEITY. NOTE: QIL1 AND FVA1 ARE FORMYLATED ILE1 AND VAL1, RESPECTIVELY. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A EOH 510 ? A HO A EOH 511 ? ? 1.06 2 1 HO B EOH 502 ? ? HO B EOH 508 ? B 1.08 3 1 HE1 A TRP 9 ? ? HO A EOH 507 ? A 1.24 4 1 HO B ETA 16 ? ? HO A EOH 513 ? B 1.25 5 1 O A EOH 510 ? A O A EOH 511 ? ? 1.88 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 H21 A EOH 504 ? B 1_555 H23 B EOH 506 ? ? 1_545 1.04 2 1 HO A EOH 514 ? B 1_555 H11 B EOH 506 ? ? 4_576 1.08 3 1 O A EOH 514 ? B 1_555 H11 B EOH 506 ? ? 4_576 1.21 4 1 HO A EOH 514 ? B 1_555 C1 B EOH 506 ? ? 4_576 1.56 5 1 O A EOH 514 ? B 1_555 C1 B EOH 506 ? ? 4_576 1.98 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD1 A TRP 11 ? B NE1 A TRP 11 ? B CE2 A TRP 11 ? B 101.23 109.00 -7.77 0.90 N 2 1 NE1 A TRP 11 ? B CE2 A TRP 11 ? B CZ2 A TRP 11 ? B 122.56 130.40 -7.84 1.10 N 3 1 CD2 A TRP 11 ? B CE3 A TRP 11 ? B CZ3 A TRP 11 ? B 110.08 118.80 -8.72 1.30 N 4 1 CE3 A TRP 11 ? B CZ3 A TRP 11 ? B CH2 A TRP 11 ? B 130.18 121.20 8.98 1.10 N 5 1 CH2 A TRP 11 ? B CZ2 A TRP 11 ? B CE2 A TRP 11 ? B 110.53 117.40 -6.87 1.00 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 5 ? ? -160.49 87.86 2 1 TRP A 13 ? ? -158.33 85.09 3 1 TRP A 15 ? ? -157.93 83.45 4 1 ALA B 5 ? ? -156.81 86.68 5 1 TRP B 13 ? ? -161.47 87.94 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 DLE N N N N 14 DLE CA C N R 15 DLE CB C N N 16 DLE CG C N N 17 DLE CD1 C N N 18 DLE CD2 C N N 19 DLE C C N N 20 DLE O O N N 21 DLE OXT O N N 22 DLE H H N N 23 DLE H2 H N N 24 DLE HA H N N 25 DLE HB2 H N N 26 DLE HB3 H N N 27 DLE HG H N N 28 DLE HD11 H N N 29 DLE HD12 H N N 30 DLE HD13 H N N 31 DLE HD21 H N N 32 DLE HD22 H N N 33 DLE HD23 H N N 34 DLE HXT H N N 35 DVA N N N N 36 DVA CA C N R 37 DVA CB C N N 38 DVA CG1 C N N 39 DVA CG2 C N N 40 DVA C C N N 41 DVA O O N N 42 DVA OXT O N N 43 DVA H H N N 44 DVA H2 H N N 45 DVA HA H N N 46 DVA HB H N N 47 DVA HG11 H N N 48 DVA HG12 H N N 49 DVA HG13 H N N 50 DVA HG21 H N N 51 DVA HG22 H N N 52 DVA HG23 H N N 53 DVA HXT H N N 54 EOH C1 C N N 55 EOH C2 C N N 56 EOH O O N N 57 EOH H11 H N N 58 EOH H12 H N N 59 EOH H21 H N N 60 EOH H22 H N N 61 EOH H23 H N N 62 EOH HO H N N 63 ETA CA C N N 64 ETA N N N N 65 ETA C C N N 66 ETA O O N N 67 ETA HA1 H N N 68 ETA HA2 H N N 69 ETA H H N N 70 ETA H2 H N N 71 ETA HB1 H N N 72 ETA HB2 H N N 73 ETA HO H N N 74 FVA C C N N 75 FVA N N N N 76 FVA O O N N 77 FVA CA C N S 78 FVA CB C N N 79 FVA CG1 C N N 80 FVA CG2 C N N 81 FVA H H N N 82 FVA HA H N N 83 FVA HB H N N 84 FVA HG11 H N N 85 FVA HG12 H N N 86 FVA HG13 H N N 87 FVA HG21 H N N 88 FVA HG22 H N N 89 FVA HG23 H N N 90 FVA O1 O N N 91 FVA CN C N N 92 FVA HN H N N 93 FVA OXT O N N 94 FVA HXT H N N 95 GLY N N N N 96 GLY CA C N N 97 GLY C C N N 98 GLY O O N N 99 GLY OXT O N N 100 GLY H H N N 101 GLY H2 H N N 102 GLY HA2 H N N 103 GLY HA3 H N N 104 GLY HXT H N N 105 HOH O O N N 106 HOH H1 H N N 107 HOH H2 H N N 108 QIL C C N N 109 QIL N N N N 110 QIL O O N N 111 QIL CA C N S 112 QIL CB C N S 113 QIL CD1 C N N 114 QIL CG1 C N N 115 QIL CG2 C N N 116 QIL CN C N N 117 QIL O1 O N N 118 QIL OXT O N N 119 QIL HXT H N N 120 QIL H H N N 121 QIL HA H N N 122 QIL HB H N N 123 QIL HD11 H N N 124 QIL HD12 H N N 125 QIL HD13 H N N 126 QIL HG12 H N N 127 QIL HG13 H N N 128 QIL HG21 H N N 129 QIL HG22 H N N 130 QIL HG23 H N N 131 QIL HN H N N 132 TRP N N N N 133 TRP CA C N S 134 TRP C C N N 135 TRP O O N N 136 TRP CB C N N 137 TRP CG C Y N 138 TRP CD1 C Y N 139 TRP CD2 C Y N 140 TRP NE1 N Y N 141 TRP CE2 C Y N 142 TRP CE3 C Y N 143 TRP CZ2 C Y N 144 TRP CZ3 C Y N 145 TRP CH2 C Y N 146 TRP OXT O N N 147 TRP H H N N 148 TRP H2 H N N 149 TRP HA H N N 150 TRP HB2 H N N 151 TRP HB3 H N N 152 TRP HD1 H N N 153 TRP HE1 H N N 154 TRP HE3 H N N 155 TRP HZ2 H N N 156 TRP HZ3 H N N 157 TRP HH2 H N N 158 TRP HXT H N N 159 TYR N N N N 160 TYR CA C N S 161 TYR C C N N 162 TYR O O N N 163 TYR CB C N N 164 TYR CG C Y N 165 TYR CD1 C Y N 166 TYR CD2 C Y N 167 TYR CE1 C Y N 168 TYR CE2 C Y N 169 TYR CZ C Y N 170 TYR OH O N N 171 TYR OXT O N N 172 TYR H H N N 173 TYR H2 H N N 174 TYR HA H N N 175 TYR HB2 H N N 176 TYR HB3 H N N 177 TYR HD1 H N N 178 TYR HD2 H N N 179 TYR HE1 H N N 180 TYR HE2 H N N 181 TYR HH H N N 182 TYR HXT H N N 183 VAL N N N N 184 VAL CA C N S 185 VAL C C N N 186 VAL O O N N 187 VAL CB C N N 188 VAL CG1 C N N 189 VAL CG2 C N N 190 VAL OXT O N N 191 VAL H H N N 192 VAL H2 H N N 193 VAL HA H N N 194 VAL HB H N N 195 VAL HG11 H N N 196 VAL HG12 H N N 197 VAL HG13 H N N 198 VAL HG21 H N N 199 VAL HG22 H N N 200 VAL HG23 H N N 201 VAL HXT H N N 202 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 DLE N CA sing N N 13 DLE N H sing N N 14 DLE N H2 sing N N 15 DLE CA CB sing N N 16 DLE CA C sing N N 17 DLE CA HA sing N N 18 DLE CB CG sing N N 19 DLE CB HB2 sing N N 20 DLE CB HB3 sing N N 21 DLE CG CD1 sing N N 22 DLE CG CD2 sing N N 23 DLE CG HG sing N N 24 DLE CD1 HD11 sing N N 25 DLE CD1 HD12 sing N N 26 DLE CD1 HD13 sing N N 27 DLE CD2 HD21 sing N N 28 DLE CD2 HD22 sing N N 29 DLE CD2 HD23 sing N N 30 DLE C O doub N N 31 DLE C OXT sing N N 32 DLE OXT HXT sing N N 33 DVA N CA sing N N 34 DVA N H sing N N 35 DVA N H2 sing N N 36 DVA CA CB sing N N 37 DVA CA C sing N N 38 DVA CA HA sing N N 39 DVA CB CG1 sing N N 40 DVA CB CG2 sing N N 41 DVA CB HB sing N N 42 DVA CG1 HG11 sing N N 43 DVA CG1 HG12 sing N N 44 DVA CG1 HG13 sing N N 45 DVA CG2 HG21 sing N N 46 DVA CG2 HG22 sing N N 47 DVA CG2 HG23 sing N N 48 DVA C O doub N N 49 DVA C OXT sing N N 50 DVA OXT HXT sing N N 51 EOH C1 C2 sing N N 52 EOH C1 O sing N N 53 EOH C1 H11 sing N N 54 EOH C1 H12 sing N N 55 EOH C2 H21 sing N N 56 EOH C2 H22 sing N N 57 EOH C2 H23 sing N N 58 EOH O HO sing N N 59 ETA CA N sing N N 60 ETA CA C sing N N 61 ETA CA HA1 sing N N 62 ETA CA HA2 sing N N 63 ETA N H sing N N 64 ETA N H2 sing N N 65 ETA C O sing N N 66 ETA C HB1 sing N N 67 ETA C HB2 sing N N 68 ETA O HO sing N N 69 FVA O C doub N N 70 FVA C CA sing N N 71 FVA H N sing N N 72 FVA N CN sing N N 73 FVA N CA sing N N 74 FVA CB CA sing N N 75 FVA CA HA sing N N 76 FVA HB CB sing N N 77 FVA CB CG2 sing N N 78 FVA CB CG1 sing N N 79 FVA HG13 CG1 sing N N 80 FVA HG12 CG1 sing N N 81 FVA CG1 HG11 sing N N 82 FVA HG22 CG2 sing N N 83 FVA HG23 CG2 sing N N 84 FVA CG2 HG21 sing N N 85 FVA CN O1 doub N N 86 FVA HN CN sing N N 87 FVA C OXT sing N N 88 FVA OXT HXT sing N N 89 GLY N CA sing N N 90 GLY N H sing N N 91 GLY N H2 sing N N 92 GLY CA C sing N N 93 GLY CA HA2 sing N N 94 GLY CA HA3 sing N N 95 GLY C O doub N N 96 GLY C OXT sing N N 97 GLY OXT HXT sing N N 98 HOH O H1 sing N N 99 HOH O H2 sing N N 100 QIL C OXT sing N N 101 QIL N CA sing N N 102 QIL O C doub N N 103 QIL CA C sing N N 104 QIL CA HA sing N N 105 QIL CB CA sing N N 106 QIL CB CG2 sing N N 107 QIL CD1 HD12 sing N N 108 QIL CD1 CG1 sing N N 109 QIL CG1 CB sing N N 110 QIL CG1 HG13 sing N N 111 QIL CG2 HG21 sing N N 112 QIL CG2 HG22 sing N N 113 QIL H N sing N N 114 QIL HB CB sing N N 115 QIL HD11 CD1 sing N N 116 QIL HG12 CG1 sing N N 117 QIL HD13 CD1 sing N N 118 QIL HG23 CG2 sing N N 119 QIL CN N sing N N 120 QIL CN O1 doub N N 121 QIL HN CN sing N N 122 QIL OXT HXT sing N N 123 TRP N CA sing N N 124 TRP N H sing N N 125 TRP N H2 sing N N 126 TRP CA C sing N N 127 TRP CA CB sing N N 128 TRP CA HA sing N N 129 TRP C O doub N N 130 TRP C OXT sing N N 131 TRP CB CG sing N N 132 TRP CB HB2 sing N N 133 TRP CB HB3 sing N N 134 TRP CG CD1 doub Y N 135 TRP CG CD2 sing Y N 136 TRP CD1 NE1 sing Y N 137 TRP CD1 HD1 sing N N 138 TRP CD2 CE2 doub Y N 139 TRP CD2 CE3 sing Y N 140 TRP NE1 CE2 sing Y N 141 TRP NE1 HE1 sing N N 142 TRP CE2 CZ2 sing Y N 143 TRP CE3 CZ3 doub Y N 144 TRP CE3 HE3 sing N N 145 TRP CZ2 CH2 doub Y N 146 TRP CZ2 HZ2 sing N N 147 TRP CZ3 CH2 sing Y N 148 TRP CZ3 HZ3 sing N N 149 TRP CH2 HH2 sing N N 150 TRP OXT HXT sing N N 151 TYR N CA sing N N 152 TYR N H sing N N 153 TYR N H2 sing N N 154 TYR CA C sing N N 155 TYR CA CB sing N N 156 TYR CA HA sing N N 157 TYR C O doub N N 158 TYR C OXT sing N N 159 TYR CB CG sing N N 160 TYR CB HB2 sing N N 161 TYR CB HB3 sing N N 162 TYR CG CD1 doub Y N 163 TYR CG CD2 sing Y N 164 TYR CD1 CE1 sing Y N 165 TYR CD1 HD1 sing N N 166 TYR CD2 CE2 doub Y N 167 TYR CD2 HD2 sing N N 168 TYR CE1 CZ doub Y N 169 TYR CE1 HE1 sing N N 170 TYR CE2 CZ sing Y N 171 TYR CE2 HE2 sing N N 172 TYR CZ OH sing N N 173 TYR OH HH sing N N 174 TYR OXT HXT sing N N 175 VAL N CA sing N N 176 VAL N H sing N N 177 VAL N H2 sing N N 178 VAL CA C sing N N 179 VAL CA CB sing N N 180 VAL CA HA sing N N 181 VAL C O doub N N 182 VAL C OXT sing N N 183 VAL CB CG1 sing N N 184 VAL CB CG2 sing N N 185 VAL CB HB sing N N 186 VAL CG1 HG11 sing N N 187 VAL CG1 HG12 sing N N 188 VAL CG1 HG13 sing N N 189 VAL CG2 HG21 sing N N 190 VAL CG2 HG22 sing N N 191 VAL CG2 HG23 sing N N 192 VAL OXT HXT sing N N 193 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 ETHANOL EOH 4 water HOH #