data_1AMT # _entry.id 1AMT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.403 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1AMT pdb_00001amt 10.2210/pdb1amt/pdb WWPDB D_1000171011 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 1988-10-09 ? 2 'Structure model' 1 1 2011-06-14 ? 3 'Structure model' 1 2 2011-07-13 ? 4 'Structure model' 1 3 2011-07-27 ? 5 'Structure model' 1 4 2012-12-12 ? 6 'Structure model' 1 5 2017-11-01 ? 7 'Structure model' 1 6 2025-03-26 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Non-polymer description' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' Other 9 6 'Structure model' 'Derived calculations' 10 6 'Structure model' Other 11 7 'Structure model' 'Data collection' 12 7 'Structure model' 'Database references' 13 7 'Structure model' 'Derived calculations' 14 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 6 'Structure model' pdbx_database_status 2 6 'Structure model' pdbx_struct_assembly 3 7 'Structure model' chem_comp 4 7 'Structure model' chem_comp_atom 5 7 'Structure model' chem_comp_bond 6 7 'Structure model' database_2 7 7 'Structure model' pdbx_entry_details 8 7 'Structure model' pdbx_modification_feature 9 7 'Structure model' struct_conn 10 7 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_pdbx_database_status.process_site' 2 6 'Structure model' '_pdbx_struct_assembly.method_details' 3 7 'Structure model' '_chem_comp.pdbx_synonyms' 4 7 'Structure model' '_database_2.pdbx_DOI' 5 7 'Structure model' '_database_2.pdbx_database_accession' 6 7 'Structure model' '_pdbx_entry_details.has_protein_modification' 7 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 8 7 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 7 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 7 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1AMT _pdbx_database_status.recvd_initial_deposition_date 1987-12-08 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1M24 unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL TRICHOTOXIN_A50E' PDB 1R9U unspecified 'SOLUTION STRUCTURE OF THE PEPTAIBOL ZERVAMICIN IIB IN METHANOL' PDB 1DLZ unspecified 'SOLUTION STRUCTURE OF THE PEPTIABOL ZERVAMICIN IIB' PDB 1IH9 unspecified 'SOLUTION STRUCTURE OF THE PEPTAIBOL ZERVAMICIN IIB BOUND TO DPC MICELLES' PDB 1GQ0 unspecified 'SOLUTION STRUCTURE OF THE PEPTAIBOL ANTIAMOEBIN I' PDB 1JOH unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL ANTIAMOEBIN I' PDB 1EE7 unspecified 'SOLUTION STRUCTURE OF THE PEPTAIBOL CHRYSOSPERMIN C BOUND TO DPC MICELLES' PDB 1OB7 unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL C' PDB 1OB6 unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL B' PDB 1OB4 unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL A' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fox, R.O.' 1 'Richards, F.M.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'A Voltage-Gated Ion Channel Model Inferred from the Crystal Structure of Alamethicin at 1.5-A Resolution.' Nature 300 325 ? 1982 NATUAS UK 0028-0836 0006 ? 6292726 10.1038/300325A0 1 'The Crystal Structure of Alamethicin at 1.5 Angstroms Resolution' 'Thesis, Yale' ? ? ? ? ? ? 0-471-06457-2 0854 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fox Jr, R.O.' 1 ? primary 'Richards, F.M.' 2 ? 1 'Fox, R.O.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'ALAMETHICIN F30' 1948.310 3 ? ? ? ? 2 non-polymer syn ACETONITRILE 41.052 2 ? ? ? ? 3 non-polymer syn METHANOL 32.042 13 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ALAMETHICIN # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)(AIB)P(AIB)A(AIB)AQ(AIB)V(AIB)GL(AIB)PV(AIB)(AIB)EQ(PHL)' _entity_poly.pdbx_seq_one_letter_code_can XAPAAAAQAVAGLAPVAAEQF _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ACETONITRILE CCN 3 METHANOL MOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 AIB n 1 3 PRO n 1 4 AIB n 1 5 ALA n 1 6 AIB n 1 7 ALA n 1 8 GLN n 1 9 AIB n 1 10 VAL n 1 11 AIB n 1 12 GLY n 1 13 LEU n 1 14 AIB n 1 15 PRO n 1 16 VAL n 1 17 AIB n 1 18 AIB n 1 19 GLU n 1 20 GLN n 1 21 PHL n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'TRICHODERMA VIRIDE' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 5547 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 AIB 'L-peptide linking' n 'ALPHA-AMINOISOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 CCN non-polymer . ACETONITRILE ? 'C2 H3 N' 41.052 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MOH non-polymer . METHANOL ? 'C H4 O' 32.042 PHL 'L-peptide linking' n L-PHENYLALANINOL 'bound form of Phenylalaninal' 'C9 H13 N O' 151.206 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 AIB 2 1 1 AIB AIB A . n A 1 3 PRO 3 2 2 PRO PRO A . n A 1 4 AIB 4 3 3 AIB AIB A . n A 1 5 ALA 5 4 4 ALA ALA A . n A 1 6 AIB 6 5 5 AIB AIB A . n A 1 7 ALA 7 6 6 ALA ALA A . n A 1 8 GLN 8 7 7 GLN GLN A . n A 1 9 AIB 9 8 8 AIB AIB A . n A 1 10 VAL 10 9 9 VAL VAL A . n A 1 11 AIB 11 10 10 AIB AIB A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 AIB 14 13 13 AIB AIB A . n A 1 15 PRO 15 14 14 PRO PRO A . n A 1 16 VAL 16 15 15 VAL VAL A . n A 1 17 AIB 17 16 16 AIB AIB A . n A 1 18 AIB 18 17 17 AIB AIB A . n A 1 19 GLU 19 18 18 GLU GLU A . n A 1 20 GLN 20 19 19 GLN GLN A . n A 1 21 PHL 21 20 20 PHL PHL A . n B 1 1 ACE 1 0 0 ACE ACE B . n B 1 2 AIB 2 1 1 AIB AIB B . n B 1 3 PRO 3 2 2 PRO PRO B . n B 1 4 AIB 4 3 3 AIB AIB B . n B 1 5 ALA 5 4 4 ALA ALA B . n B 1 6 AIB 6 5 5 AIB AIB B . n B 1 7 ALA 7 6 6 ALA ALA B . n B 1 8 GLN 8 7 7 GLN GLN B . n B 1 9 AIB 9 8 8 AIB AIB B . n B 1 10 VAL 10 9 9 VAL VAL B . n B 1 11 AIB 11 10 10 AIB AIB B . n B 1 12 GLY 12 11 11 GLY GLY B . n B 1 13 LEU 13 12 12 LEU LEU B . n B 1 14 AIB 14 13 13 AIB AIB B . n B 1 15 PRO 15 14 14 PRO PRO B . n B 1 16 VAL 16 15 15 VAL VAL B . n B 1 17 AIB 17 16 16 AIB AIB B . n B 1 18 AIB 18 17 17 AIB AIB B . n B 1 19 GLU 19 18 18 GLU GLU B . n B 1 20 GLN 20 19 19 GLN GLN B . n B 1 21 PHL 21 20 20 PHL PHL B . n C 1 1 ACE 1 0 0 ACE ACE C . n C 1 2 AIB 2 1 1 AIB AIB C . n C 1 3 PRO 3 2 2 PRO PRO C . n C 1 4 AIB 4 3 3 AIB AIB C . n C 1 5 ALA 5 4 4 ALA ALA C . n C 1 6 AIB 6 5 5 AIB AIB C . n C 1 7 ALA 7 6 6 ALA ALA C . n C 1 8 GLN 8 7 7 GLN GLN C . n C 1 9 AIB 9 8 8 AIB AIB C . n C 1 10 VAL 10 9 9 VAL VAL C . n C 1 11 AIB 11 10 10 AIB AIB C . n C 1 12 GLY 12 11 11 GLY GLY C . n C 1 13 LEU 13 12 12 LEU LEU C . n C 1 14 AIB 14 13 13 AIB AIB C . n C 1 15 PRO 15 14 14 PRO PRO C . n C 1 16 VAL 16 15 15 VAL VAL C . n C 1 17 AIB 17 16 16 AIB AIB C . n C 1 18 AIB 18 17 17 AIB AIB C . n C 1 19 GLU 19 18 18 GLU GLU C . n C 1 20 GLN 20 19 19 GLN GLN C . n C 1 21 PHL 21 20 20 PHL PHL C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CCN 1 22 22 CCN CCN A . E 3 MOH 1 23 23 MOH MOH A . F 2 CCN 1 22 22 CCN CCN B . G 3 MOH 1 23 23 MOH MOH B . H 3 MOH 1 24 24 MOH MOH B . I 3 MOH 1 25 25 MOH MOH B . J 3 MOH 1 26 26 MOH MOH B . K 3 MOH 1 27 27 MOH MOH B . L 3 MOH 1 28 28 MOH MOH B . M 3 MOH 1 29 29 MOH MOH B . N 3 MOH 1 30 30 MOH MOH B . O 3 MOH 1 22 22 MOH MOH C . P 3 MOH 1 23 23 MOH MOH C . Q 3 MOH 1 24 24 MOH MOH C . R 3 MOH 1 25 25 MOH MOH C . # _software.name PROLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1AMT _cell.length_a 33.330 _cell.length_b 29.620 _cell.length_c 23.200 _cell.angle_alpha 90.00 _cell.angle_beta 120.40 _cell.angle_gamma 90.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AMT _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.entry_id 1AMT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.71 _exptl_crystal.density_percent_sol 28.20 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1AMT _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 5458 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.155 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 417 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 449 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.040 ? ? ? 'X-RAY DIFFRACTION' ? p_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1AMT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1AMT _struct.title 'Crystal structure of alamethicin at 1.5 angstrom resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1AMT _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'ALAMETHICIN, PEPTAIBOL, ANTIBACTERIAL, ANTIFUNGAL, ANTIBIOTIC' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 3 ? R N N 3 ? # _struct_ref.id 1 _struct_ref.db_name NOR _struct_ref.db_code NOR00010 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession NOR00010 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1AMT A 1 ? 21 ? NOR00010 0 ? 20 ? 0 20 2 1 1AMT B 1 ? 21 ? NOR00010 0 ? 20 ? 0 20 3 1 1AMT C 1 ? 21 ? NOR00010 0 ? 20 ? 0 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2950 ? 1 MORE -22 ? 1 'SSA (A^2)' 5440 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 AIB A 2 ? GLU A 19 ? AIB A 1 GLU A 18 1 ? 18 HELX_P HELX_P2 2 AIB B 2 ? PHL B 21 ? AIB B 1 PHL B 20 1 ? 20 HELX_P HELX_P3 3 AIB C 2 ? LEU C 13 ? AIB C 1 LEU C 12 1 ? 12 HELX_P HELX_P4 4 LEU C 13 ? PHL C 21 ? LEU C 12 PHL C 20 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A AIB 2 N ? ? A ACE 0 A AIB 1 1_555 ? ? ? ? ? ? ? 1.143 ? ? covale2 covale both ? A AIB 2 C ? ? ? 1_555 A PRO 3 N ? ? A AIB 1 A PRO 2 1_555 ? ? ? ? ? ? ? 1.252 ? ? covale3 covale both ? A PRO 3 C ? ? ? 1_555 A AIB 4 N ? ? A PRO 2 A AIB 3 1_555 ? ? ? ? ? ? ? 1.284 ? ? covale4 covale both ? A AIB 4 C ? ? ? 1_555 A ALA 5 N ? ? A AIB 3 A ALA 4 1_555 ? ? ? ? ? ? ? 1.174 ? ? covale5 covale both ? A ALA 5 C ? ? ? 1_555 A AIB 6 N ? ? A ALA 4 A AIB 5 1_555 ? ? ? ? ? ? ? 1.235 ? ? covale6 covale both ? A AIB 6 C ? ? ? 1_555 A ALA 7 N ? ? A AIB 5 A ALA 6 1_555 ? ? ? ? ? ? ? 1.277 ? ? covale7 covale both ? A GLN 8 C ? ? ? 1_555 A AIB 9 N ? ? A GLN 7 A AIB 8 1_555 ? ? ? ? ? ? ? 1.249 ? ? covale8 covale both ? A AIB 9 C ? ? ? 1_555 A VAL 10 N ? ? A AIB 8 A VAL 9 1_555 ? ? ? ? ? ? ? 1.264 ? ? covale9 covale both ? A VAL 10 C ? ? ? 1_555 A AIB 11 N ? ? A VAL 9 A AIB 10 1_555 ? ? ? ? ? ? ? 1.414 ? ? covale10 covale both ? A AIB 11 C ? ? ? 1_555 A GLY 12 N ? ? A AIB 10 A GLY 11 1_555 ? ? ? ? ? ? ? 1.314 ? ? covale11 covale both ? A LEU 13 C ? ? ? 1_555 A AIB 14 N ? ? A LEU 12 A AIB 13 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale12 covale both ? A AIB 14 C ? ? ? 1_555 A PRO 15 N ? ? A AIB 13 A PRO 14 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale13 covale both ? A VAL 16 C ? ? ? 1_555 A AIB 17 N ? ? A VAL 15 A AIB 16 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale14 covale both ? A AIB 17 C ? ? ? 1_555 A AIB 18 N ? ? A AIB 16 A AIB 17 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale15 covale both ? A AIB 18 C ? ? ? 1_555 A GLU 19 N ? ? A AIB 17 A GLU 18 1_555 ? ? ? ? ? ? ? 1.355 ? ? covale16 covale both ? A GLN 20 C ? ? ? 1_555 A PHL 21 N ? ? A GLN 19 A PHL 20 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale17 covale both ? B ACE 1 C ? ? ? 1_555 B AIB 2 N ? ? B ACE 0 B AIB 1 1_555 ? ? ? ? ? ? ? 1.254 ? ? covale18 covale both ? B AIB 2 C ? ? ? 1_555 B PRO 3 N ? ? B AIB 1 B PRO 2 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale19 covale both ? B PRO 3 C ? ? ? 1_555 B AIB 4 N ? ? B PRO 2 B AIB 3 1_555 ? ? ? ? ? ? ? 1.233 ? ? covale20 covale both ? B AIB 4 C ? ? ? 1_555 B ALA 5 N ? ? B AIB 3 B ALA 4 1_555 ? ? ? ? ? ? ? 1.284 ? ? covale21 covale both ? B ALA 5 C ? ? ? 1_555 B AIB 6 N ? ? B ALA 4 B AIB 5 1_555 ? ? ? ? ? ? ? 1.286 ? ? covale22 covale both ? B AIB 6 C ? ? ? 1_555 B ALA 7 N ? ? B AIB 5 B ALA 6 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale23 covale both ? B GLN 8 C ? ? ? 1_555 B AIB 9 N ? ? B GLN 7 B AIB 8 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale24 covale both ? B AIB 9 C ? ? ? 1_555 B VAL 10 N ? ? B AIB 8 B VAL 9 1_555 ? ? ? ? ? ? ? 1.265 ? ? covale25 covale both ? B VAL 10 C ? ? ? 1_555 B AIB 11 N ? ? B VAL 9 B AIB 10 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale26 covale both ? B AIB 11 C ? ? ? 1_555 B GLY 12 N ? ? B AIB 10 B GLY 11 1_555 ? ? ? ? ? ? ? 1.210 ? ? covale27 covale both ? B LEU 13 C ? ? ? 1_555 B AIB 14 N ? ? B LEU 12 B AIB 13 1_555 ? ? ? ? ? ? ? 1.282 ? ? covale28 covale both ? B AIB 14 C ? ? ? 1_555 B PRO 15 N ? ? B AIB 13 B PRO 14 1_555 ? ? ? ? ? ? ? 1.220 ? ? covale29 covale both ? B VAL 16 C ? ? ? 1_555 B AIB 17 N ? ? B VAL 15 B AIB 16 1_555 ? ? ? ? ? ? ? 1.236 ? ? covale30 covale both ? B AIB 17 C ? ? ? 1_555 B AIB 18 N ? ? B AIB 16 B AIB 17 1_555 ? ? ? ? ? ? ? 1.288 ? ? covale31 covale both ? B AIB 18 C ? ? ? 1_555 B GLU 19 N ? ? B AIB 17 B GLU 18 1_555 ? ? ? ? ? ? ? 1.308 ? ? covale32 covale both ? B GLN 20 C ? ? ? 1_555 B PHL 21 N ? ? B GLN 19 B PHL 20 1_555 ? ? ? ? ? ? ? 1.365 ? ? covale33 covale both ? C ACE 1 C ? ? ? 1_555 C AIB 2 N ? ? C ACE 0 C AIB 1 1_555 ? ? ? ? ? ? ? 1.249 ? ? covale34 covale both ? C AIB 2 C ? ? ? 1_555 C PRO 3 N ? ? C AIB 1 C PRO 2 1_555 ? ? ? ? ? ? ? 1.302 ? ? covale35 covale both ? C PRO 3 C ? ? ? 1_555 C AIB 4 N ? ? C PRO 2 C AIB 3 1_555 ? ? ? ? ? ? ? 1.198 ? ? covale36 covale both ? C AIB 4 C ? ? ? 1_555 C ALA 5 N ? ? C AIB 3 C ALA 4 1_555 ? ? ? ? ? ? ? 1.240 ? ? covale37 covale both ? C ALA 5 C ? ? ? 1_555 C AIB 6 N ? ? C ALA 4 C AIB 5 1_555 ? ? ? ? ? ? ? 1.304 ? ? covale38 covale both ? C AIB 6 C ? ? ? 1_555 C ALA 7 N ? ? C AIB 5 C ALA 6 1_555 ? ? ? ? ? ? ? 1.194 ? ? covale39 covale both ? C GLN 8 C ? ? ? 1_555 C AIB 9 N ? ? C GLN 7 C AIB 8 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale40 covale both ? C AIB 9 C ? ? ? 1_555 C VAL 10 N ? ? C AIB 8 C VAL 9 1_555 ? ? ? ? ? ? ? 1.243 ? ? covale41 covale both ? C VAL 10 C ? ? ? 1_555 C AIB 11 N ? ? C VAL 9 C AIB 10 1_555 ? ? ? ? ? ? ? 1.257 ? ? covale42 covale both ? C AIB 11 C ? ? ? 1_555 C GLY 12 N ? ? C AIB 10 C GLY 11 1_555 ? ? ? ? ? ? ? 1.366 ? ? covale43 covale both ? C LEU 13 C ? ? ? 1_555 C AIB 14 N ? ? C LEU 12 C AIB 13 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale44 covale both ? C AIB 14 C ? ? ? 1_555 C PRO 15 N ? ? C AIB 13 C PRO 14 1_555 ? ? ? ? ? ? ? 1.257 ? ? covale45 covale both ? C VAL 16 C ? ? ? 1_555 C AIB 17 N ? ? C VAL 15 C AIB 16 1_555 ? ? ? ? ? ? ? 1.382 ? ? covale46 covale both ? C AIB 17 C ? ? ? 1_555 C AIB 18 N ? ? C AIB 16 C AIB 17 1_555 ? ? ? ? ? ? ? 1.290 ? ? covale47 covale both ? C AIB 18 C ? ? ? 1_555 C GLU 19 N ? ? C AIB 17 C GLU 18 1_555 ? ? ? ? ? ? ? 1.250 ? ? covale48 covale both ? C GLN 20 C ? ? ? 1_555 C PHL 21 N ? ? C GLN 19 C PHL 20 1_555 ? ? ? ? ? ? ? 1.321 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 AIB A 2 ? . . . . AIB A 1 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 2 AIB A 4 ? . . . . AIB A 3 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 3 AIB A 6 ? . . . . AIB A 5 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 4 AIB A 9 ? . . . . AIB A 8 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 5 AIB A 11 ? . . . . AIB A 10 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 6 AIB A 14 ? . . . . AIB A 13 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 7 AIB A 17 ? . . . . AIB A 16 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 8 AIB A 18 ? . . . . AIB A 17 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 9 PHL A 21 ? . . . . PHL A 20 ? 1_555 . . . . . . . PHE 1 PHL Deoxidation 'Named protein modification' 10 AIB B 2 ? . . . . AIB B 1 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 11 AIB B 4 ? . . . . AIB B 3 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 12 AIB B 6 ? . . . . AIB B 5 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 13 AIB B 9 ? . . . . AIB B 8 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 14 AIB B 11 ? . . . . AIB B 10 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 15 AIB B 14 ? . . . . AIB B 13 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 16 AIB B 17 ? . . . . AIB B 16 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 17 AIB B 18 ? . . . . AIB B 17 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 18 PHL B 21 ? . . . . PHL B 20 ? 1_555 . . . . . . . PHE 1 PHL Deoxidation 'Named protein modification' 19 AIB C 2 ? . . . . AIB C 1 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 20 AIB C 4 ? . . . . AIB C 3 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 21 AIB C 6 ? . . . . AIB C 5 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 22 AIB C 9 ? . . . . AIB C 8 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 23 AIB C 11 ? . . . . AIB C 10 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 24 AIB C 14 ? . . . . AIB C 13 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 25 AIB C 17 ? . . . . AIB C 16 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 26 AIB C 18 ? . . . . AIB C 17 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 27 PHL C 21 ? . . . . PHL C 20 ? 1_555 . . . . . . . PHE 1 PHL Deoxidation 'Named protein modification' 28 ACE A 1 ? AIB A 2 ? ACE A 0 ? 1_555 AIB A 1 ? 1_555 . . AIB 42 ACE None 'Terminal acetylation' 29 ACE B 1 ? AIB B 2 ? ACE B 0 ? 1_555 AIB B 1 ? 1_555 . . AIB 42 ACE None 'Terminal acetylation' 30 ACE C 1 ? AIB C 2 ? ACE C 0 ? 1_555 AIB C 1 ? 1_555 . . AIB 42 ACE None 'Terminal acetylation' # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B CCN 22 ? 2 'BINDING SITE FOR RESIDUE CCN B 22' AC2 Software A CCN 22 ? 3 'BINDING SITE FOR RESIDUE CCN A 22' AC3 Software ? ? ? ? 8 'BINDING SITE FOR CHAIN A OF ALAMETHICIN F30' AC4 Software ? ? ? ? 13 'BINDING SITE FOR CHAIN B OF ALAMETHICIN F30' AC5 Software ? ? ? ? 15 'BINDING SITE FOR CHAIN C OF ALAMETHICIN F30' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ALA B 5 ? ALA B 4 . ? 1_555 ? 2 AC1 2 AIB C 6 ? AIB C 5 . ? 1_556 ? 3 AC2 3 GLU A 19 ? GLU A 18 . ? 1_555 ? 4 AC2 3 AIB C 18 ? AIB C 17 . ? 1_555 ? 5 AC2 3 PHL C 21 ? PHL C 20 . ? 1_555 ? 6 AC3 8 CCN D . ? CCN A 22 . ? 1_555 ? 7 AC3 8 ACE B 1 ? ACE B 0 . ? 1_554 ? 8 AC3 8 GLN B 8 ? GLN B 7 . ? 1_554 ? 9 AC3 8 GLU B 19 ? GLU B 18 . ? 1_554 ? 10 AC3 8 PRO C 3 ? PRO C 2 . ? 1_555 ? 11 AC3 8 AIB C 4 ? AIB C 3 . ? 1_454 ? 12 AC3 8 GLN C 8 ? GLN C 7 . ? 1_454 ? 13 AC3 8 PHL C 21 ? PHL C 20 . ? 1_555 ? 14 AC4 13 AIB A 2 ? AIB A 1 . ? 1_556 ? 15 AC4 13 AIB A 6 ? AIB A 5 . ? 1_556 ? 16 AC4 13 GLN A 20 ? GLN A 19 . ? 1_556 ? 17 AC4 13 CCN F . ? CCN B 22 . ? 1_555 ? 18 AC4 13 ALA C 5 ? ALA C 4 . ? 1_455 ? 19 AC4 13 GLN C 8 ? GLN C 7 . ? 1_555 ? 20 AC4 13 GLN C 8 ? GLN C 7 . ? 1_455 ? 21 AC4 13 GLY C 12 ? GLY C 11 . ? 1_555 ? 22 AC4 13 LEU C 13 ? LEU C 12 . ? 1_555 ? 23 AC4 13 PRO C 15 ? PRO C 14 . ? 1_555 ? 24 AC4 13 GLU C 19 ? GLU C 18 . ? 1_555 ? 25 AC4 13 GLN C 20 ? GLN C 19 . ? 1_556 ? 26 AC4 13 PHL C 21 ? PHL C 20 . ? 1_556 ? 27 AC5 15 AIB A 2 ? AIB A 1 . ? 1_555 ? 28 AC5 15 ALA A 5 ? ALA A 4 . ? 1_555 ? 29 AC5 15 GLN A 20 ? GLN A 19 . ? 1_656 ? 30 AC5 15 GLN A 20 ? GLN A 19 . ? 1_555 ? 31 AC5 15 PHL A 21 ? PHL A 20 . ? 1_656 ? 32 AC5 15 CCN D . ? CCN A 22 . ? 1_555 ? 33 AC5 15 ACE B 1 ? ACE B 0 . ? 1_555 ? 34 AC5 15 ALA B 7 ? ALA B 6 . ? 1_555 ? 35 AC5 15 GLN B 8 ? GLN B 7 . ? 1_555 ? 36 AC5 15 AIB B 11 ? AIB B 10 . ? 1_555 ? 37 AC5 15 PRO B 15 ? PRO B 14 . ? 1_555 ? 38 AC5 15 VAL B 16 ? VAL B 15 . ? 1_554 ? 39 AC5 15 GLU B 19 ? GLU B 18 . ? 1_655 ? 40 AC5 15 GLN B 20 ? GLN B 19 . ? 1_554 ? 41 AC5 15 CCN F . ? CCN B 22 . ? 1_554 ? # _pdbx_entry_details.entry_id 1AMT _pdbx_entry_details.compound_details ;ALAMETHICIN F30 IS LINEAR PEPTIDE, A MEMBER OF THE PEPTAIBOL FAMILY OF MEMBRANE CHANNEL FORMING PEPTIDES. HERE, ALAMETHICIN F30 IS REPRESENTED BY THE SEQUENCE (SEQRES) ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A ACE 0 ? ? N A AIB 1 ? ? 1.143 1.336 -0.193 0.023 Y 2 1 C A AIB 3 ? ? N A ALA 4 ? ? 1.174 1.336 -0.162 0.023 Y 3 1 CD A GLU 18 ? ? OE2 A GLU 18 ? ? 1.103 1.252 -0.149 0.011 N 4 1 C B ALA 6 ? ? N B GLN 7 ? ? 1.185 1.336 -0.151 0.023 Y 5 1 C B GLY 11 ? ? O B GLY 11 ? ? 1.363 1.232 0.131 0.016 N 6 1 C B AIB 13 ? ? N B PRO 14 ? ? 1.220 1.338 -0.118 0.019 Y 7 1 C B VAL 15 ? ? O B VAL 15 ? ? 1.362 1.229 0.133 0.019 N 8 1 C B GLU 18 ? ? O B GLU 18 ? ? 1.396 1.229 0.167 0.019 N 9 1 CD B GLN 19 ? ? NE2 B GLN 19 ? ? 1.109 1.324 -0.215 0.025 N 10 1 C C PRO 2 ? ? O C PRO 2 ? ? 1.358 1.228 0.130 0.020 N 11 1 C C AIB 5 ? ? N C ALA 6 ? ? 1.194 1.336 -0.142 0.023 Y 12 1 CD C GLU 18 ? ? OE1 C GLU 18 ? ? 1.140 1.252 -0.112 0.011 N 13 1 C C GLU 18 ? ? O C GLU 18 ? ? 1.391 1.229 0.162 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG1 A VAL 15 ? ? CB A VAL 15 ? ? CG2 A VAL 15 ? ? 121.30 110.90 10.40 1.60 N 2 1 CA A VAL 15 ? ? CB A VAL 15 ? ? CG2 A VAL 15 ? ? 101.56 110.90 -9.34 1.50 N 3 1 CA B ALA 6 ? ? C B ALA 6 ? ? N B GLN 7 ? ? 130.47 117.20 13.27 2.20 Y 4 1 CA B GLY 11 ? ? C B GLY 11 ? ? N B LEU 12 ? ? 131.52 117.20 14.32 2.20 Y 5 1 O B GLY 11 ? ? C B GLY 11 ? ? N B LEU 12 ? ? 111.40 122.70 -11.30 1.60 Y 6 1 CB B PRO 14 ? ? CA B PRO 14 ? ? C B PRO 14 ? ? 128.62 111.70 16.92 2.10 N 7 1 O B VAL 15 ? ? C B VAL 15 ? ? N B AIB 16 ? ? 109.07 122.70 -13.63 1.60 Y 8 1 C B VAL 15 ? ? N B AIB 16 ? ? CA B AIB 16 ? ? 140.11 121.70 18.41 2.50 Y 9 1 OE1 B GLU 18 ? ? CD B GLU 18 ? ? OE2 B GLU 18 ? ? 113.66 123.30 -9.64 1.20 N 10 1 CA C GLY 11 ? ? C C GLY 11 ? ? O C GLY 11 ? ? 104.78 120.60 -15.82 1.80 N 11 1 CA C AIB 17 ? ? C C AIB 17 ? ? N C GLU 18 ? ? 130.83 117.20 13.63 2.20 Y 12 1 O C AIB 17 ? ? C C AIB 17 ? ? N C GLU 18 ? ? 112.48 122.70 -10.22 1.60 Y 13 1 OE1 C GLU 18 ? ? CD C GLU 18 ? ? OE2 C GLU 18 ? ? 114.64 123.30 -8.66 1.20 N # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 VAL A 15 ? ? 13.13 2 1 GLY C 11 ? ? 10.83 # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C A ACE 0 ? ? N A AIB 1 ? ? 1.14 2 1 C A AIB 3 ? ? N A ALA 4 ? ? 1.17 3 1 C B ALA 6 ? ? N B GLN 7 ? ? 1.19 4 1 C C PRO 2 ? ? N C AIB 3 ? ? 1.20 5 1 C C AIB 5 ? ? N C ALA 6 ? ? 1.19 6 1 C C GLY 11 ? ? N C LEU 12 ? ? 1.20 # _pdbx_molecule_features.prd_id PRD_000163 _pdbx_molecule_features.name Alamethicin _pdbx_molecule_features.type Peptaibol _pdbx_molecule_features.class Antibiotic _pdbx_molecule_features.details ;ALAMETHICIN F30 IS AN EICOSAMERIC HELICAL PEPTIDE. THE N-TERM IS ACETYLATED (RESIDUE 0) ; # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_000163 A 2 PRD_000163 B 3 PRD_000163 C # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 AIB N N N N 8 AIB CA C N N 9 AIB C C N N 10 AIB O O N N 11 AIB OXT O N N 12 AIB CB1 C N N 13 AIB CB2 C N N 14 AIB H H N N 15 AIB H2 H N N 16 AIB HXT H N N 17 AIB HB11 H N N 18 AIB HB12 H N N 19 AIB HB13 H N N 20 AIB HB21 H N N 21 AIB HB22 H N N 22 AIB HB23 H N N 23 ALA N N N N 24 ALA CA C N S 25 ALA C C N N 26 ALA O O N N 27 ALA CB C N N 28 ALA OXT O N N 29 ALA H H N N 30 ALA H2 H N N 31 ALA HA H N N 32 ALA HB1 H N N 33 ALA HB2 H N N 34 ALA HB3 H N N 35 ALA HXT H N N 36 CCN N N N N 37 CCN C1 C N N 38 CCN C2 C N N 39 CCN H21 H N N 40 CCN H22 H N N 41 CCN H23 H N N 42 GLN N N N N 43 GLN CA C N S 44 GLN C C N N 45 GLN O O N N 46 GLN CB C N N 47 GLN CG C N N 48 GLN CD C N N 49 GLN OE1 O N N 50 GLN NE2 N N N 51 GLN OXT O N N 52 GLN H H N N 53 GLN H2 H N N 54 GLN HA H N N 55 GLN HB2 H N N 56 GLN HB3 H N N 57 GLN HG2 H N N 58 GLN HG3 H N N 59 GLN HE21 H N N 60 GLN HE22 H N N 61 GLN HXT H N N 62 GLU N N N N 63 GLU CA C N S 64 GLU C C N N 65 GLU O O N N 66 GLU CB C N N 67 GLU CG C N N 68 GLU CD C N N 69 GLU OE1 O N N 70 GLU OE2 O N N 71 GLU OXT O N N 72 GLU H H N N 73 GLU H2 H N N 74 GLU HA H N N 75 GLU HB2 H N N 76 GLU HB3 H N N 77 GLU HG2 H N N 78 GLU HG3 H N N 79 GLU HE2 H N N 80 GLU HXT H N N 81 GLY N N N N 82 GLY CA C N N 83 GLY C C N N 84 GLY O O N N 85 GLY OXT O N N 86 GLY H H N N 87 GLY H2 H N N 88 GLY HA2 H N N 89 GLY HA3 H N N 90 GLY HXT H N N 91 LEU N N N N 92 LEU CA C N S 93 LEU C C N N 94 LEU O O N N 95 LEU CB C N N 96 LEU CG C N N 97 LEU CD1 C N N 98 LEU CD2 C N N 99 LEU OXT O N N 100 LEU H H N N 101 LEU H2 H N N 102 LEU HA H N N 103 LEU HB2 H N N 104 LEU HB3 H N N 105 LEU HG H N N 106 LEU HD11 H N N 107 LEU HD12 H N N 108 LEU HD13 H N N 109 LEU HD21 H N N 110 LEU HD22 H N N 111 LEU HD23 H N N 112 LEU HXT H N N 113 MOH C C N N 114 MOH O O N N 115 MOH H1 H N N 116 MOH H2 H N N 117 MOH H3 H N N 118 MOH HO H N N 119 PHL N N N N 120 PHL CA C N S 121 PHL C C N N 122 PHL O O N N 123 PHL CB C N N 124 PHL CG C Y N 125 PHL CD1 C Y N 126 PHL CD2 C Y N 127 PHL CE1 C Y N 128 PHL CE2 C Y N 129 PHL CZ C Y N 130 PHL H H N N 131 PHL H2 H N N 132 PHL HA H N N 133 PHL HC1 H N N 134 PHL HC2 H N N 135 PHL HO H N N 136 PHL HB2 H N N 137 PHL HB3 H N N 138 PHL HD1 H N N 139 PHL HD2 H N N 140 PHL HE1 H N N 141 PHL HE2 H N N 142 PHL HZ H N N 143 PRO N N N N 144 PRO CA C N S 145 PRO C C N N 146 PRO O O N N 147 PRO CB C N N 148 PRO CG C N N 149 PRO CD C N N 150 PRO OXT O N N 151 PRO H H N N 152 PRO HA H N N 153 PRO HB2 H N N 154 PRO HB3 H N N 155 PRO HG2 H N N 156 PRO HG3 H N N 157 PRO HD2 H N N 158 PRO HD3 H N N 159 PRO HXT H N N 160 VAL N N N N 161 VAL CA C N S 162 VAL C C N N 163 VAL O O N N 164 VAL CB C N N 165 VAL CG1 C N N 166 VAL CG2 C N N 167 VAL OXT O N N 168 VAL H H N N 169 VAL H2 H N N 170 VAL HA H N N 171 VAL HB H N N 172 VAL HG11 H N N 173 VAL HG12 H N N 174 VAL HG13 H N N 175 VAL HG21 H N N 176 VAL HG22 H N N 177 VAL HG23 H N N 178 VAL HXT H N N 179 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 AIB N CA sing N N 7 AIB N H sing N N 8 AIB N H2 sing N N 9 AIB CA C sing N N 10 AIB CA CB1 sing N N 11 AIB CA CB2 sing N N 12 AIB C O doub N N 13 AIB C OXT sing N N 14 AIB OXT HXT sing N N 15 AIB CB1 HB11 sing N N 16 AIB CB1 HB12 sing N N 17 AIB CB1 HB13 sing N N 18 AIB CB2 HB21 sing N N 19 AIB CB2 HB22 sing N N 20 AIB CB2 HB23 sing N N 21 ALA N CA sing N N 22 ALA N H sing N N 23 ALA N H2 sing N N 24 ALA CA C sing N N 25 ALA CA CB sing N N 26 ALA CA HA sing N N 27 ALA C O doub N N 28 ALA C OXT sing N N 29 ALA CB HB1 sing N N 30 ALA CB HB2 sing N N 31 ALA CB HB3 sing N N 32 ALA OXT HXT sing N N 33 CCN N C1 trip N N 34 CCN C1 C2 sing N N 35 CCN C2 H21 sing N N 36 CCN C2 H22 sing N N 37 CCN C2 H23 sing N N 38 GLN N CA sing N N 39 GLN N H sing N N 40 GLN N H2 sing N N 41 GLN CA C sing N N 42 GLN CA CB sing N N 43 GLN CA HA sing N N 44 GLN C O doub N N 45 GLN C OXT sing N N 46 GLN CB CG sing N N 47 GLN CB HB2 sing N N 48 GLN CB HB3 sing N N 49 GLN CG CD sing N N 50 GLN CG HG2 sing N N 51 GLN CG HG3 sing N N 52 GLN CD OE1 doub N N 53 GLN CD NE2 sing N N 54 GLN NE2 HE21 sing N N 55 GLN NE2 HE22 sing N N 56 GLN OXT HXT sing N N 57 GLU N CA sing N N 58 GLU N H sing N N 59 GLU N H2 sing N N 60 GLU CA C sing N N 61 GLU CA CB sing N N 62 GLU CA HA sing N N 63 GLU C O doub N N 64 GLU C OXT sing N N 65 GLU CB CG sing N N 66 GLU CB HB2 sing N N 67 GLU CB HB3 sing N N 68 GLU CG CD sing N N 69 GLU CG HG2 sing N N 70 GLU CG HG3 sing N N 71 GLU CD OE1 doub N N 72 GLU CD OE2 sing N N 73 GLU OE2 HE2 sing N N 74 GLU OXT HXT sing N N 75 GLY N CA sing N N 76 GLY N H sing N N 77 GLY N H2 sing N N 78 GLY CA C sing N N 79 GLY CA HA2 sing N N 80 GLY CA HA3 sing N N 81 GLY C O doub N N 82 GLY C OXT sing N N 83 GLY OXT HXT sing N N 84 LEU N CA sing N N 85 LEU N H sing N N 86 LEU N H2 sing N N 87 LEU CA C sing N N 88 LEU CA CB sing N N 89 LEU CA HA sing N N 90 LEU C O doub N N 91 LEU C OXT sing N N 92 LEU CB CG sing N N 93 LEU CB HB2 sing N N 94 LEU CB HB3 sing N N 95 LEU CG CD1 sing N N 96 LEU CG CD2 sing N N 97 LEU CG HG sing N N 98 LEU CD1 HD11 sing N N 99 LEU CD1 HD12 sing N N 100 LEU CD1 HD13 sing N N 101 LEU CD2 HD21 sing N N 102 LEU CD2 HD22 sing N N 103 LEU CD2 HD23 sing N N 104 LEU OXT HXT sing N N 105 MOH C O sing N N 106 MOH C H1 sing N N 107 MOH C H2 sing N N 108 MOH C H3 sing N N 109 MOH O HO sing N N 110 PHL N CA sing N N 111 PHL N H sing N N 112 PHL N H2 sing N N 113 PHL CA C sing N N 114 PHL CA CB sing N N 115 PHL CA HA sing N N 116 PHL C O sing N N 117 PHL C HC1 sing N N 118 PHL C HC2 sing N N 119 PHL O HO sing N N 120 PHL CB CG sing N N 121 PHL CB HB2 sing N N 122 PHL CB HB3 sing N N 123 PHL CG CD1 doub Y N 124 PHL CG CD2 sing Y N 125 PHL CD1 CE1 sing Y N 126 PHL CD1 HD1 sing N N 127 PHL CD2 CE2 doub Y N 128 PHL CD2 HD2 sing N N 129 PHL CE1 CZ doub Y N 130 PHL CE1 HE1 sing N N 131 PHL CE2 CZ sing Y N 132 PHL CE2 HE2 sing N N 133 PHL CZ HZ sing N N 134 PRO N CA sing N N 135 PRO N CD sing N N 136 PRO N H sing N N 137 PRO CA C sing N N 138 PRO CA CB sing N N 139 PRO CA HA sing N N 140 PRO C O doub N N 141 PRO C OXT sing N N 142 PRO CB CG sing N N 143 PRO CB HB2 sing N N 144 PRO CB HB3 sing N N 145 PRO CG CD sing N N 146 PRO CG HG2 sing N N 147 PRO CG HG3 sing N N 148 PRO CD HD2 sing N N 149 PRO CD HD3 sing N N 150 PRO OXT HXT sing N N 151 VAL N CA sing N N 152 VAL N H sing N N 153 VAL N H2 sing N N 154 VAL CA C sing N N 155 VAL CA CB sing N N 156 VAL CA HA sing N N 157 VAL C O doub N N 158 VAL C OXT sing N N 159 VAL CB CG1 sing N N 160 VAL CB CG2 sing N N 161 VAL CB HB sing N N 162 VAL CG1 HG11 sing N N 163 VAL CG1 HG12 sing N N 164 VAL CG1 HG13 sing N N 165 VAL CG2 HG21 sing N N 166 VAL CG2 HG22 sing N N 167 VAL CG2 HG23 sing N N 168 VAL OXT HXT sing N N 169 # _atom_sites.entry_id 1AMT _atom_sites.fract_transf_matrix[1][1] 0.030003 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.017603 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.033761 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.049974 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_ #