data_1ANA # _entry.id 1ANA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ANA pdb_00001ana 10.2210/pdb1ana/pdb RCSB ADDB01 ? ? WWPDB D_1000171027 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1982-07-29 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2021-11-03 5 'Structure model' 2 1 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' Other 9 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' atom_sites 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_remark 5 4 'Structure model' pdbx_distant_solvent_atoms 6 4 'Structure model' struct_conn 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.Cartn_x' 2 4 'Structure model' '_atom_site.Cartn_y' 3 4 'Structure model' '_atom_site.Cartn_z' 4 4 'Structure model' '_atom_site.occupancy' 5 4 'Structure model' '_atom_sites.fract_transf_matrix[1][1]' 6 4 'Structure model' '_atom_sites.fract_transf_matrix[1][3]' 7 4 'Structure model' '_atom_sites.fract_transf_matrix[2][1]' 8 4 'Structure model' '_atom_sites.fract_transf_matrix[2][2]' 9 4 'Structure model' '_atom_sites.fract_transf_matrix[3][2]' 10 4 'Structure model' '_atom_sites.fract_transf_matrix[3][3]' 11 4 'Structure model' '_database_2.pdbx_DOI' 12 4 'Structure model' '_database_2.pdbx_database_accession' 13 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ANA _pdbx_database_status.recvd_initial_deposition_date 1982-06-04 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Conner, B.N.' 1 'Yoon, C.' 2 'Dickerson, J.L.' 3 'Dickerson, R.E.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Helix geometry and hydration in an A-DNA tetramer: IC-C-G-G' J.Mol.Biol. 174 663 695 1984 JMOBAK UK 0022-2836 0070 ? 6726797 '10.1016/0022-2836(84)90089-5' 1 'The Molecular Structure of d(ICpCpGpG), a Fragment of Right-Handed Double Helical A-DNA' Nature 295 294 299 1982 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Conner, B.N.' 1 ? primary 'Yoon, C.' 2 ? primary 'Dickerson, J.L.' 3 ? primary 'Dickerson, R.E.' 4 ? 1 'Conner, B.N.' 5 ? 1 'Takano, T.' 6 ? 1 'Tanaka, S.' 7 ? 1 'Itakura, K.' 8 ? 1 'Dickerson, R.E.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*(C38)P*CP*GP*G)-3') ; 1317.715 2 ? ? ? ? 2 water nat water 18.015 86 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(C38)(DC)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C38 n 1 2 DC n 1 3 DG n 1 4 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight C38 'DNA linking' n "5-IODO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 I N3 O7 P' 433.094 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C38 1 1 1 C38 +C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DG 4 4 4 DG G A . n B 1 1 C38 1 5 5 C38 +C B . n B 1 2 DC 2 6 6 DC C B . n B 1 3 DG 3 7 7 DG G B . n B 1 4 DG 4 8 8 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 9 9 HOH HOH A . C 2 HOH 2 10 10 HOH HOH A . C 2 HOH 3 13 13 HOH HOH A . C 2 HOH 4 14 14 HOH HOH A . C 2 HOH 5 16 16 HOH HOH A . C 2 HOH 6 17 17 HOH HOH A . C 2 HOH 7 18 18 HOH HOH A . C 2 HOH 8 22 22 HOH HOH A . C 2 HOH 9 23 23 HOH HOH A . C 2 HOH 10 24 24 HOH HOH A . C 2 HOH 11 25 25 HOH HOH A . C 2 HOH 12 26 26 HOH HOH A . C 2 HOH 13 28 28 HOH HOH A . C 2 HOH 14 29 29 HOH HOH A . C 2 HOH 15 31 31 HOH HOH A . C 2 HOH 16 32 32 HOH HOH A . C 2 HOH 17 33 33 HOH HOH A . C 2 HOH 18 35 35 HOH HOH A . C 2 HOH 19 36 36 HOH HOH A . C 2 HOH 20 37 37 HOH HOH A . C 2 HOH 21 38 38 HOH HOH A . C 2 HOH 22 39 39 HOH HOH A . C 2 HOH 23 40 40 HOH HOH A . C 2 HOH 24 42 42 HOH HOH A . C 2 HOH 25 44 44 HOH HOH A . C 2 HOH 26 49 49 HOH HOH A . C 2 HOH 27 51 51 HOH HOH A . C 2 HOH 28 52 52 HOH HOH A . C 2 HOH 29 56 56 HOH HOH A . C 2 HOH 30 61 61 HOH HOH A . C 2 HOH 31 64 64 HOH HOH A . C 2 HOH 32 65 65 HOH HOH A . C 2 HOH 33 69 69 HOH HOH A . C 2 HOH 34 70 70 HOH HOH A . C 2 HOH 35 73 73 HOH HOH A . C 2 HOH 36 74 74 HOH HOH A . C 2 HOH 37 75 75 HOH HOH A . C 2 HOH 38 76 76 HOH HOH A . C 2 HOH 39 77 77 HOH HOH A . C 2 HOH 40 78 78 HOH HOH A . C 2 HOH 41 80 80 HOH HOH A . C 2 HOH 42 86 86 HOH HOH A . C 2 HOH 43 88 88 HOH HOH A . C 2 HOH 44 90 90 HOH HOH A . C 2 HOH 45 91 91 HOH HOH A . C 2 HOH 46 92 92 HOH HOH A . C 2 HOH 47 93 93 HOH HOH A . D 2 HOH 1 11 11 HOH HOH B . D 2 HOH 2 12 12 HOH HOH B . D 2 HOH 3 15 15 HOH HOH B . D 2 HOH 4 19 19 HOH HOH B . D 2 HOH 5 20 20 HOH HOH B . D 2 HOH 6 21 21 HOH HOH B . D 2 HOH 7 27 27 HOH HOH B . D 2 HOH 8 30 30 HOH HOH B . D 2 HOH 9 34 34 HOH HOH B . D 2 HOH 10 41 41 HOH HOH B . D 2 HOH 11 43 43 HOH HOH B . D 2 HOH 12 45 45 HOH HOH B . D 2 HOH 13 46 46 HOH HOH B . D 2 HOH 14 47 47 HOH HOH B . D 2 HOH 15 48 48 HOH HOH B . D 2 HOH 16 50 50 HOH HOH B . D 2 HOH 17 53 53 HOH HOH B . D 2 HOH 18 54 54 HOH HOH B . D 2 HOH 19 55 55 HOH HOH B . D 2 HOH 20 57 57 HOH HOH B . D 2 HOH 21 58 58 HOH HOH B . D 2 HOH 22 59 59 HOH HOH B . D 2 HOH 23 60 60 HOH HOH B . D 2 HOH 24 62 62 HOH HOH B . D 2 HOH 25 63 63 HOH HOH B . D 2 HOH 26 66 66 HOH HOH B . D 2 HOH 27 67 67 HOH HOH B . D 2 HOH 28 68 68 HOH HOH B . D 2 HOH 29 71 71 HOH HOH B . D 2 HOH 30 72 72 HOH HOH B . D 2 HOH 31 79 79 HOH HOH B . D 2 HOH 32 81 81 HOH HOH B . D 2 HOH 33 82 82 HOH HOH B . D 2 HOH 34 83 83 HOH HOH B . D 2 HOH 35 84 84 HOH HOH B . D 2 HOH 36 85 85 HOH HOH B . D 2 HOH 37 87 87 HOH HOH B . D 2 HOH 38 89 89 HOH HOH B . D 2 HOH 39 94 94 HOH HOH B . # _software.name JACK-LEVITT _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1ANA _cell.length_a 41.100 _cell.length_b 41.100 _cell.length_c 26.700 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ANA _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 1ANA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas 1.5000 _exptl_crystal.density_Matthews 2.24 _exptl_crystal.density_percent_sol 49.0000 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 275.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details 'VAPOR DIFFUSION, temperature 275.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 ISOPROPANOL ? ? ? 1 3 1 SPERMINE_HCL ? ? ? 1 4 1 'NA CACODYLATE' ? ? ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type 'SYNTEX P1' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1ANA _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 2.000 _reflns.number_obs 1486 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1ANA _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 2.000 _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 2.000 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.165 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 160 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 246 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 8.000 # _database_PDB_matrix.entry_id 1ANA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1ANA _struct.title 'HELIX GEOMETRY AND HYDRATION IN AN A-DNA TETRAMER. IC-C-G-G' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ANA _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A-DNA, DOUBLE HELIX, MODIFIED, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1ANA _struct_ref.pdbx_db_accession 1ANA _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ANA A 1 ? 4 ? 1ANA 1 ? 4 ? 1 4 2 1 1ANA B 1 ? 4 ? 1ANA 5 ? 8 ? 5 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A C38 1 "O3'" ? ? ? 1_555 A DC 2 P ? ? A C38 1 A DC 2 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale2 covale one ? B C38 1 "O3'" ? ? ? 1_555 B DC 2 P ? ? B C38 5 B DC 6 1_555 ? ? ? ? ? ? ? 1.602 ? ? hydrog1 hydrog ? ? A C38 1 N3 ? ? ? 1_555 B DG 4 N1 ? ? A C38 1 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C38 1 N4 ? ? ? 1_555 B DG 4 O6 ? ? A C38 1 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C38 1 O2 ? ? ? 1_555 B DG 4 N2 ? ? A C38 1 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 2 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 2 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 2 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 3 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 3 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 3 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B C38 1 N3 ? ? A DG 4 B C38 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B C38 1 O2 ? ? A DG 4 B C38 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B C38 1 N4 ? ? A DG 4 B C38 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C5 A DC 2 ? ? C6 A DC 2 ? ? 1.393 1.339 0.054 0.008 N 2 1 C5 A DG 3 ? ? N7 A DG 3 ? ? 1.350 1.388 -0.038 0.006 N 3 1 N7 A DG 3 ? ? C8 A DG 3 ? ? 1.343 1.305 0.038 0.006 N 4 1 C5 A DG 4 ? ? N7 A DG 4 ? ? 1.351 1.388 -0.037 0.006 N 5 1 N7 A DG 4 ? ? C8 A DG 4 ? ? 1.344 1.305 0.039 0.006 N 6 1 C5 B DC 6 ? ? C6 B DC 6 ? ? 1.398 1.339 0.059 0.008 N 7 1 C5 B DG 7 ? ? N7 B DG 7 ? ? 1.350 1.388 -0.038 0.006 N 8 1 N7 B DG 7 ? ? C8 B DG 7 ? ? 1.346 1.305 0.041 0.006 N 9 1 C5 B DG 8 ? ? N7 B DG 8 ? ? 1.347 1.388 -0.041 0.006 N 10 1 N7 B DG 8 ? ? C8 B DG 8 ? ? 1.342 1.305 0.037 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" B C38 5 ? ? "O3'" B C38 5 ? ? P B DC 6 ? ? 112.07 119.70 -7.63 1.20 Y 2 1 "O5'" B DC 6 ? ? "C5'" B DC 6 ? ? "C4'" B DC 6 ? ? 101.00 109.40 -8.40 0.80 N 3 1 "O4'" B DC 6 ? ? "C4'" B DC 6 ? ? "C3'" B DC 6 ? ? 99.80 104.50 -4.70 0.40 N 4 1 "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 111.55 108.30 3.25 0.30 N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DG _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 7 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.059 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A C38 1 A C38 1 ? DC ? 2 B C38 1 B C38 5 ? DC ? # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 88 ? C HOH . 2 1 A HOH 92 ? C HOH . 3 1 B HOH 21 ? D HOH . 4 1 B HOH 62 ? D HOH . # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 10 ? 8.93 . 2 1 O ? A HOH 25 ? 6.33 . 3 1 O ? A HOH 29 ? 6.30 . 4 1 O ? A HOH 51 ? 7.88 . 5 1 O ? A HOH 92 ? 6.89 . 6 1 O ? B HOH 27 ? 6.51 . 7 1 O ? B HOH 41 ? 6.03 . 8 1 O ? B HOH 45 ? 6.09 . 9 1 O ? B HOH 50 ? 8.26 . 10 1 O ? B HOH 54 ? 9.01 . 11 1 O ? B HOH 55 ? 7.08 . 12 1 O ? B HOH 60 ? 7.07 . 13 1 O ? B HOH 62 ? 9.69 . 14 1 O ? B HOH 63 ? 11.09 . 15 1 O ? B HOH 82 ? 7.87 . 16 1 O ? B HOH 85 ? 6.52 . 17 1 O ? B HOH 87 ? 8.73 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal C38 O3P O N N 1 C38 P P N N 2 C38 O1P O N N 3 C38 O2P O N N 4 C38 "O5'" O N N 5 C38 "C5'" C N N 6 C38 "C4'" C N R 7 C38 "O4'" O N N 8 C38 "C3'" C N S 9 C38 "O3'" O N N 10 C38 "C2'" C N N 11 C38 "C1'" C N R 12 C38 N1 N N N 13 C38 C2 C N N 14 C38 O2 O N N 15 C38 N3 N N N 16 C38 C4 C N N 17 C38 N4 N N N 18 C38 C5 C N N 19 C38 C6 C N N 20 C38 I I N N 21 C38 H3P H N N 22 C38 H2P H N N 23 C38 "H5'1" H N N 24 C38 "H5'2" H N N 25 C38 "H4'" H N N 26 C38 "H3'" H N N 27 C38 HA H N N 28 C38 "H2'1" H N N 29 C38 "H2'2" H N N 30 C38 "H1'" H N N 31 C38 H4N1 H N N 32 C38 H4N2 H N N 33 C38 H6 H N N 34 DC OP3 O N N 35 DC P P N N 36 DC OP1 O N N 37 DC OP2 O N N 38 DC "O5'" O N N 39 DC "C5'" C N N 40 DC "C4'" C N R 41 DC "O4'" O N N 42 DC "C3'" C N S 43 DC "O3'" O N N 44 DC "C2'" C N N 45 DC "C1'" C N R 46 DC N1 N N N 47 DC C2 C N N 48 DC O2 O N N 49 DC N3 N N N 50 DC C4 C N N 51 DC N4 N N N 52 DC C5 C N N 53 DC C6 C N N 54 DC HOP3 H N N 55 DC HOP2 H N N 56 DC "H5'" H N N 57 DC "H5''" H N N 58 DC "H4'" H N N 59 DC "H3'" H N N 60 DC "HO3'" H N N 61 DC "H2'" H N N 62 DC "H2''" H N N 63 DC "H1'" H N N 64 DC H41 H N N 65 DC H42 H N N 66 DC H5 H N N 67 DC H6 H N N 68 DG OP3 O N N 69 DG P P N N 70 DG OP1 O N N 71 DG OP2 O N N 72 DG "O5'" O N N 73 DG "C5'" C N N 74 DG "C4'" C N R 75 DG "O4'" O N N 76 DG "C3'" C N S 77 DG "O3'" O N N 78 DG "C2'" C N N 79 DG "C1'" C N R 80 DG N9 N Y N 81 DG C8 C Y N 82 DG N7 N Y N 83 DG C5 C Y N 84 DG C6 C N N 85 DG O6 O N N 86 DG N1 N N N 87 DG C2 C N N 88 DG N2 N N N 89 DG N3 N N N 90 DG C4 C Y N 91 DG HOP3 H N N 92 DG HOP2 H N N 93 DG "H5'" H N N 94 DG "H5''" H N N 95 DG "H4'" H N N 96 DG "H3'" H N N 97 DG "HO3'" H N N 98 DG "H2'" H N N 99 DG "H2''" H N N 100 DG "H1'" H N N 101 DG H8 H N N 102 DG H1 H N N 103 DG H21 H N N 104 DG H22 H N N 105 HOH O O N N 106 HOH H1 H N N 107 HOH H2 H N N 108 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C38 O3P P sing N N 1 C38 O3P H3P sing N N 2 C38 P O1P doub N N 3 C38 P O2P sing N N 4 C38 P "O5'" sing N N 5 C38 O2P H2P sing N N 6 C38 "O5'" "C5'" sing N N 7 C38 "C5'" "C4'" sing N N 8 C38 "C5'" "H5'1" sing N N 9 C38 "C5'" "H5'2" sing N N 10 C38 "C4'" "O4'" sing N N 11 C38 "C4'" "C3'" sing N N 12 C38 "C4'" "H4'" sing N N 13 C38 "O4'" "C1'" sing N N 14 C38 "C3'" "O3'" sing N N 15 C38 "C3'" "C2'" sing N N 16 C38 "C3'" "H3'" sing N N 17 C38 "O3'" HA sing N N 18 C38 "C2'" "C1'" sing N N 19 C38 "C2'" "H2'1" sing N N 20 C38 "C2'" "H2'2" sing N N 21 C38 "C1'" N1 sing N N 22 C38 "C1'" "H1'" sing N N 23 C38 N1 C2 sing N N 24 C38 N1 C6 sing N N 25 C38 C2 O2 doub N N 26 C38 C2 N3 sing N N 27 C38 N3 C4 doub N N 28 C38 C4 N4 sing N N 29 C38 C4 C5 sing N N 30 C38 N4 H4N1 sing N N 31 C38 N4 H4N2 sing N N 32 C38 C5 C6 doub N N 33 C38 C5 I sing N N 34 C38 C6 H6 sing N N 35 DC OP3 P sing N N 36 DC OP3 HOP3 sing N N 37 DC P OP1 doub N N 38 DC P OP2 sing N N 39 DC P "O5'" sing N N 40 DC OP2 HOP2 sing N N 41 DC "O5'" "C5'" sing N N 42 DC "C5'" "C4'" sing N N 43 DC "C5'" "H5'" sing N N 44 DC "C5'" "H5''" sing N N 45 DC "C4'" "O4'" sing N N 46 DC "C4'" "C3'" sing N N 47 DC "C4'" "H4'" sing N N 48 DC "O4'" "C1'" sing N N 49 DC "C3'" "O3'" sing N N 50 DC "C3'" "C2'" sing N N 51 DC "C3'" "H3'" sing N N 52 DC "O3'" "HO3'" sing N N 53 DC "C2'" "C1'" sing N N 54 DC "C2'" "H2'" sing N N 55 DC "C2'" "H2''" sing N N 56 DC "C1'" N1 sing N N 57 DC "C1'" "H1'" sing N N 58 DC N1 C2 sing N N 59 DC N1 C6 sing N N 60 DC C2 O2 doub N N 61 DC C2 N3 sing N N 62 DC N3 C4 doub N N 63 DC C4 N4 sing N N 64 DC C4 C5 sing N N 65 DC N4 H41 sing N N 66 DC N4 H42 sing N N 67 DC C5 C6 doub N N 68 DC C5 H5 sing N N 69 DC C6 H6 sing N N 70 DG OP3 P sing N N 71 DG OP3 HOP3 sing N N 72 DG P OP1 doub N N 73 DG P OP2 sing N N 74 DG P "O5'" sing N N 75 DG OP2 HOP2 sing N N 76 DG "O5'" "C5'" sing N N 77 DG "C5'" "C4'" sing N N 78 DG "C5'" "H5'" sing N N 79 DG "C5'" "H5''" sing N N 80 DG "C4'" "O4'" sing N N 81 DG "C4'" "C3'" sing N N 82 DG "C4'" "H4'" sing N N 83 DG "O4'" "C1'" sing N N 84 DG "C3'" "O3'" sing N N 85 DG "C3'" "C2'" sing N N 86 DG "C3'" "H3'" sing N N 87 DG "O3'" "HO3'" sing N N 88 DG "C2'" "C1'" sing N N 89 DG "C2'" "H2'" sing N N 90 DG "C2'" "H2''" sing N N 91 DG "C1'" N9 sing N N 92 DG "C1'" "H1'" sing N N 93 DG N9 C8 sing Y N 94 DG N9 C4 sing Y N 95 DG C8 N7 doub Y N 96 DG C8 H8 sing N N 97 DG N7 C5 sing Y N 98 DG C5 C6 sing N N 99 DG C5 C4 doub Y N 100 DG C6 O6 doub N N 101 DG C6 N1 sing N N 102 DG N1 C2 sing N N 103 DG N1 H1 sing N N 104 DG C2 N2 sing N N 105 DG C2 N3 doub N N 106 DG N2 H21 sing N N 107 DG N2 H22 sing N N 108 DG N3 C4 sing N N 109 HOH O H1 sing N N 110 HOH O H2 sing N N 111 # _ndb_struct_conf_na.entry_id 1ANA _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C38 1 1_555 B DG 4 1_555 -0.152 0.002 0.010 3.912 -14.530 0.824 1 A_C381:DG8_B A 1 ? B 8 ? 19 1 1 A DC 2 1_555 B DG 3 1_555 -0.197 -0.166 0.004 2.386 -13.145 0.302 2 A_DC2:DG7_B A 2 ? B 7 ? 19 1 1 A DG 3 1_555 B DC 2 1_555 0.149 0.006 0.266 -5.593 -20.580 1.789 3 A_DG3:DC6_B A 3 ? B 6 ? 19 1 1 A DG 4 1_555 B C38 1 1_555 0.180 0.093 -0.985 -12.524 -11.012 -6.246 4 A_DG4:C385_B A 4 ? B 5 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C38 1 1_555 B DG 4 1_555 A DC 2 1_555 B DG 3 1_555 0.273 -1.248 3.293 -0.350 5.464 35.648 -2.775 -0.489 3.072 8.860 0.568 36.052 1 AA_C381DC2:DG7DG8_BB A 1 ? B 8 ? A 2 ? B 7 ? 1 A DC 2 1_555 B DG 3 1_555 A DG 3 1_555 B DC 2 1_555 0.373 -1.639 3.408 -0.223 13.348 32.051 -4.696 -0.658 2.542 22.969 0.384 34.653 2 AA_DC2DG3:DC6DG7_BB A 2 ? B 7 ? A 3 ? B 6 ? 1 A DG 3 1_555 B DC 2 1_555 A DG 4 1_555 B C38 1 1_555 -0.919 -1.185 3.708 9.247 5.311 34.173 -2.752 2.928 3.148 8.776 -15.281 35.751 3 AA_DG3DG4:C385DC6_BB A 3 ? B 6 ? A 4 ? B 5 ? # _atom_sites.entry_id 1ANA _atom_sites.fract_transf_matrix[1][1] 0.024331 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024331 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.037453 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I N O P # loop_