HEADER TRANSFERRIN 11-DEC-96 1AOV TITLE APO DUCK OVOTRANSFERRIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: APO-OVOTRANSFERRIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANAS PLATYRHYNCHOS; SOURCE 3 ORGANISM_TAXID: 8839; SOURCE 4 CELL: EGG KEYWDS TRANSFERRIN, IRON UPTAKE, PROTEIN CRYSTALLOGRAPHY, MOLECULAR KEYWDS 2 REPLACEMENT EXPDTA X-RAY DIFFRACTION AUTHOR A.RAWAS,H.MUIRHEAD REVDAT 3 02-AUG-23 1AOV 1 REMARK REVDAT 2 24-FEB-09 1AOV 1 VERSN REVDAT 1 16-JUN-97 1AOV 0 JRNL AUTH A.RAWAS,K.MORETON,H.MUIRHEAD,J.WILLIAMS JRNL TITL PRELIMINARY CRYSTALLOGRAPHIC STUDIES ON DUCK OVOTRANSFERRIN. JRNL REF J.MOL.BIOL. V. 208 213 1989 JRNL REFN ISSN 0022-2836 JRNL PMID 2769754 JRNL DOI 10.1016/0022-2836(89)90100-9 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.0 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.8 REMARK 3 NUMBER OF REFLECTIONS : 7487 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.320 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 754 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.020 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5299 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.016 REMARK 3 BOND ANGLES (DEGREES) : 3.881 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.742 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : N REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARAM19X.PRO REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPH19X.PRO REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1AOV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000171076. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : MAY-89 REMARK 200 TEMPERATURE (KELVIN) : 277 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 5 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX7.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.488 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : FILM REMARK 200 DETECTOR MANUFACTURER : FILM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, CCP4 SCALING PROGRAM REMARK 200 DATA SCALING SOFTWARE : CCP4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7487 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.000 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : 0.05000 REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 50.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.11000 REMARK 200 R SYM FOR SHELL (I) : 0.18000 REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.0 REMARK 200 STARTING MODEL: PDB ENTRY 1DOT REMARK 200 REMARK 200 REMARK: DATA WERE COLLECTED USING ROTATION CAMERA. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM 15 - 30% REMARK 280 PEG 6000, PH 6., PH 6.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.81000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.48000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.37000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.48000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.81000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.37000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C TYR A 92 N ARG A 246 1.36 REMARK 500 C PHE A 432 N LYS A 588 1.36 REMARK 500 O TYR A 92 N ARG A 246 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 26 NE2 HIS A 26 CD2 -0.067 REMARK 500 HIS A 116 NE2 HIS A 116 CD2 -0.069 REMARK 500 HIS A 250 NE2 HIS A 250 CD2 -0.072 REMARK 500 HIS A 455 NE2 HIS A 455 CD2 -0.073 REMARK 500 HIS A 472 NE2 HIS A 472 CD2 -0.076 REMARK 500 HIS A 518 NE2 HIS A 518 CD2 -0.068 REMARK 500 HIS A 542 NE2 HIS A 542 CD2 -0.073 REMARK 500 HIS A 585 NE2 HIS A 585 CD2 -0.083 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 3 CA - N - CD ANGL. DEV. = -8.4 DEGREES REMARK 500 TRP A 9 CD1 - CG - CD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP A 9 CE2 - CD2 - CG ANGL. DEV. = -6.3 DEGREES REMARK 500 GLU A 16 CA - CB - CG ANGL. DEV. = -14.5 DEGREES REMARK 500 ASN A 51 N - CA - C ANGL. DEV. = -16.3 DEGREES REMARK 500 ASN A 52 N - CA - CB ANGL. DEV. = -12.5 DEGREES REMARK 500 LYS A 73 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 TYR A 82 CB - CG - CD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 GLU A 83 N - CA - C ANGL. DEV. = 17.1 DEGREES REMARK 500 ARG A 84 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 84 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 TYR A 92 C - N - CA ANGL. DEV. = 17.0 DEGREES REMARK 500 TYR A 92 CB - CG - CD2 ANGL. DEV. = -4.6 DEGREES REMARK 500 TYR A 92 N - CA - C ANGL. DEV. = -22.7 DEGREES REMARK 500 ARG A 110 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG A 110 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 110 CA - C - N ANGL. DEV. = -14.3 DEGREES REMARK 500 TRP A 125 CD1 - CG - CD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 TRP A 125 CE2 - CD2 - CG ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG A 135 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 TRP A 140 N - CA - CB ANGL. DEV. = -15.9 DEGREES REMARK 500 TRP A 140 CD1 - CG - CD2 ANGL. DEV. = 7.8 DEGREES REMARK 500 TRP A 140 CB - CG - CD1 ANGL. DEV. = -9.4 DEGREES REMARK 500 TRP A 140 CE2 - CD2 - CG ANGL. DEV. = -7.2 DEGREES REMARK 500 GLU A 141 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 SER A 148 N - CA - CB ANGL. DEV. = -10.3 DEGREES REMARK 500 LYS A 169 CB - CG - CD ANGL. DEV. = -17.6 DEGREES REMARK 500 CYS A 171 CA - CB - SG ANGL. DEV. = 11.0 DEGREES REMARK 500 ARG A 184 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 TYR A 224 CB - CG - CD1 ANGL. DEV. = -4.8 DEGREES REMARK 500 TRP A 244 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 TRP A 244 CG - CD2 - CE3 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 246 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 VAL A 247 CG1 - CB - CG2 ANGL. DEV. = -10.2 DEGREES REMARK 500 VAL A 247 N - CA - C ANGL. DEV. = -20.6 DEGREES REMARK 500 TRP A 264 CD1 - CG - CD2 ANGL. DEV. = 5.2 DEGREES REMARK 500 TRP A 264 CE2 - CD2 - CG ANGL. DEV. = -5.2 DEGREES REMARK 500 GLN A 270 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 TYR A 272 CB - CG - CD2 ANGL. DEV. = -8.9 DEGREES REMARK 500 ASP A 281 N - CA - C ANGL. DEV. = 23.0 DEGREES REMARK 500 MET A 306 CA - CB - CG ANGL. DEV. = 11.7 DEGREES REMARK 500 GLU A 323 N - CA - CB ANGL. DEV. = -12.4 DEGREES REMARK 500 ARG A 332 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ASP A 334 CA - C - N ANGL. DEV. = -16.0 DEGREES REMARK 500 GLN A 335 CA - CB - CG ANGL. DEV. = 19.8 DEGREES REMARK 500 THR A 337 N - CA - C ANGL. DEV. = 20.1 DEGREES REMARK 500 ARG A 341 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 341 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 GLU A 342 CA - C - N ANGL. DEV. = -14.5 DEGREES REMARK 500 CYS A 348 CA - CB - SG ANGL. DEV. = -12.0 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 76 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 3 -153.83 -144.46 REMARK 500 LYS A 4 34.53 -157.18 REMARK 500 MET A 27 59.54 -141.60 REMARK 500 GLN A 29 20.54 -69.01 REMARK 500 ARG A 84 -73.64 -113.41 REMARK 500 TRP A 125 -63.64 -134.78 REMARK 500 GLU A 136 -52.35 154.59 REMARK 500 ASP A 137 -50.36 -27.03 REMARK 500 SER A 145 51.89 -166.26 REMARK 500 SER A 148 -111.76 -134.09 REMARK 500 GLN A 150 43.98 -88.06 REMARK 500 GLN A 168 -38.85 -130.92 REMARK 500 ASP A 177 -92.17 -103.92 REMARK 500 ALA A 178 -59.66 -166.31 REMARK 500 TYR A 191 -76.32 -61.72 REMARK 500 PRO A 218 -8.83 -58.79 REMARK 500 CYS A 242 78.75 -150.57 REMARK 500 ALA A 249 165.51 -34.01 REMARK 500 LYS A 259 34.54 -62.82 REMARK 500 SER A 280 -101.84 -146.05 REMARK 500 LYS A 290 97.39 29.18 REMARK 500 LEU A 299 -58.88 79.46 REMARK 500 PRO A 311 103.02 -42.91 REMARK 500 GLU A 312 -19.48 -30.54 REMARK 500 PHE A 322 -74.64 -72.17 REMARK 500 GLU A 323 -71.94 -15.51 REMARK 500 LYS A 333 -165.98 -120.77 REMARK 500 GLN A 335 101.48 -54.71 REMARK 500 VAL A 338 50.40 -148.17 REMARK 500 GLU A 342 66.22 -18.27 REMARK 500 ASN A 343 70.03 -17.79 REMARK 500 VAL A 410 -69.73 -121.13 REMARK 500 ASP A 417 12.08 -64.59 REMARK 500 THR A 419 -75.84 -101.32 REMARK 500 CYS A 421 -15.07 -140.81 REMARK 500 SER A 422 -80.61 -167.06 REMARK 500 TYR A 430 -169.72 -60.84 REMARK 500 TYR A 431 -118.44 -110.40 REMARK 500 LYS A 438 -143.46 -114.96 REMARK 500 SER A 440 89.42 -36.88 REMARK 500 ASN A 446 2.08 -69.57 REMARK 500 ALA A 457 154.26 167.46 REMARK 500 THR A 461 -77.20 -48.87 REMARK 500 CYS A 478 41.38 -94.56 REMARK 500 PHE A 480 -61.47 12.53 REMARK 500 TYR A 483 -50.52 -144.12 REMARK 500 GLU A 486 162.14 175.25 REMARK 500 PRO A 494 -16.76 -49.84 REMARK 500 GLU A 507 18.40 -147.59 REMARK 500 LEU A 509 -82.77 54.28 REMARK 500 REMARK 500 THIS ENTRY HAS 68 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 42 0.07 SIDE CHAIN REMARK 500 TYR A 272 0.19 SIDE CHAIN REMARK 500 TYR A 431 0.07 SIDE CHAIN REMARK 500 PHE A 432 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1AOV A 1 686 UNP P56410 TRFE_ANAPL 1 686 SEQRES 1 A 686 ALA PRO PRO LYS THR THR VAL ARG TRP CYS THR ILE SER SEQRES 2 A 686 SER ALA GLU GLU LYS LYS CYS ASN SER LEU LYS ASP HIS SEQRES 3 A 686 MET GLN GLN GLU ARG VAL THR LEU SER CYS VAL GLN LYS SEQRES 4 A 686 ALA THR TYR LEU ASP CYS ILE LYS ALA ILE SER ASN ASN SEQRES 5 A 686 GLU ALA ASP ALA ILE SER LEU ASP GLY GLY GLN VAL PHE SEQRES 6 A 686 GLU ALA GLY LEU ALA PRO TYR LYS LEU LYS PRO ILE ALA SEQRES 7 A 686 ALA GLU VAL TYR GLU ARG SER GLY GLY SER THR THR SER SEQRES 8 A 686 TYR TYR ALA VAL ALA VAL VAL LYS LYS GLY THR ASP PHE SEQRES 9 A 686 MET ILE LYS ASP LEU ARG GLY LYS THR SER CYS HIS THR SEQRES 10 A 686 GLY LEU GLY ARG SER ALA GLY TRP ASN ILE PRO ILE GLY SEQRES 11 A 686 THR LEU ILE HIS ARG GLU ASP ILE GLU TRP GLU GLY ILE SEQRES 12 A 686 GLU SER GLY ILE SER GLU GLN ALA VAL ALA LYS PHE PHE SEQRES 13 A 686 SER ALA SER CYS VAL PRO GLY ALA THR ILE GLU GLN LYS SEQRES 14 A 686 LEU CYS ARG GLN CYS LYS GLY ASP ALA LYS THR LYS CYS SEQRES 15 A 686 LEU ARG ASN GLY PRO TYR SER GLY TYR SER GLY ALA PHE SEQRES 16 A 686 GLN CYS LEU LYS ASP GLY LYS GLY ASP VAL ALA PHE VAL SEQRES 17 A 686 LYS HIS THR THR VAL GLN GLU ASN ALA PRO GLU GLU LYS SEQRES 18 A 686 ASP GLU TYR GLU LEU LEU CYS LEU ASP GLY SER ARG GLN SEQRES 19 A 686 PRO VAL ASP SER TYR LYS THR CYS ASN TRP ALA ARG VAL SEQRES 20 A 686 ALA ALA HIS ALA VAL VAL ALA ARG ASP ASP SER LYS ILE SEQRES 21 A 686 ASP ASP ILE TRP SER PHE LEU GLY MET GLN ALA TYR SER SEQRES 22 A 686 LEU GLY VAL ASP THR THR SER ASP PHE HIS LEU PHE GLY SEQRES 23 A 686 PRO PRO GLY LYS LYS ASP PRO VAL LEU LYS ASP LEU LEU SEQRES 24 A 686 PHE LYS ASP SER ALA ILE MET LEU LYS ARG VAL PRO GLU SEQRES 25 A 686 LEU MET ASP SER GLN LEU TYR LEU GLY PHE GLU TYR TYR SEQRES 26 A 686 SER ALA ILE GLN SER LEU ARG LYS ASP GLN LEU THR VAL SEQRES 27 A 686 GLY PRO ARG GLU ASN LYS ILE GLN TRP CYS ALA VAL GLY SEQRES 28 A 686 LYS ASP GLU LYS SER LYS CYS ASP ARG TRP SER VAL VAL SEQRES 29 A 686 SER ASN GLY GLU VAL GLU CYS THR ILE LEU ASP ASP ASN SEQRES 30 A 686 LYS ASP CYS ILE VAL LYS ILE THR LYS GLY GLU ALA ASP SEQRES 31 A 686 ALA ILE SER LEU ASP GLY GLY PHE VAL TYR THR ALA GLY SEQRES 32 A 686 VAL CYS GLY LEU VAL PRO VAL VAL GLY GLU SER TYR GLU SEQRES 33 A 686 ASP GLU THR GLN CYS SER LYS ASP GLU GLU GLN PRO ALA SEQRES 34 A 686 TYR TYR PHE ALA VAL ALA VAL VAL LYS LYS SER SER ALA SEQRES 35 A 686 ILE THR TRP ASN ASN LEU GLN GLY LYS LYS SER CYS HIS SEQRES 36 A 686 THR ALA VAL GLY ARG THR ALA GLY TRP ASN ILE PRO MET SEQRES 37 A 686 GLY LEU ILE HIS ASN LYS THR GLY SER CYS ASP PHE ASP SEQRES 38 A 686 ASP TYR PHE SER GLU GLY CYS ALA PRO GLY SER PRO PRO SEQRES 39 A 686 ASN SER ARG LEU CYS LYS LEU CYS GLN GLY SER GLY GLU SEQRES 40 A 686 ASN LEU LEU GLU LYS CYS VAL ALA SER SER HIS GLU LYS SEQRES 41 A 686 TYR TYR GLY TYR THR GLY ALA LEU ARG CYS LEU VAL GLU SEQRES 42 A 686 GLN GLY ASP VAL ALA PHE ILE LYS HIS SER THR VAL GLY SEQRES 43 A 686 GLU ASN VAL SER GLY SER ASN LYS ASP ASP TRP ALA LYS SEQRES 44 A 686 GLY LEU THR ARG ASP ASP PHE GLU LEU LEU CYS THR ASN SEQRES 45 A 686 GLY LYS ARG ALA LYS THR MET ASP TYR LYS THR CYS HIS SEQRES 46 A 686 LEU ALA LYS VAL PRO THR HIS ALA VAL VAL ALA ARG PRO SEQRES 47 A 686 GLU LYS ALA ASN LYS ILE ARG GLU LEU LEU GLU GLY GLN SEQRES 48 A 686 GLU LYS LEU PHE GLY LEU HIS GLY THR GLU LYS GLU ARG SEQRES 49 A 686 PHE MET MET PHE GLN SER GLN THR LYS ASP LEU LEU PHE SEQRES 50 A 686 LYS ALA LEU THR LYS CYS LEU VAL LYS LEU ARG GLN GLY SEQRES 51 A 686 ILE THR TYR LYS GLU PHE LEU GLY ASP GLU TYR TYR ALA SEQRES 52 A 686 SER VAL ALA SER LEU ASN THR CYS ASN PRO SER ASP LEU SEQRES 53 A 686 LEU GLN VAL CYS THR PHE LEU GLU ASP LYS HELIX 1 1 SER A 14 MET A 27 1 14 HELIX 2 2 TYR A 42 SER A 50 1 9 HELIX 3 3 GLY A 61 GLY A 68 1 8 HELIX 4 4 ILE A 106 LEU A 109 5 4 HELIX 5 5 ASN A 126 ARG A 135 1 10 HELIX 6 6 GLU A 149 PHE A 155 5 7 HELIX 7 7 LYS A 169 ARG A 172 1 4 HELIX 8 8 GLY A 190 LYS A 199 1 10 HELIX 9 9 THR A 211 ALA A 217 1 7 HELIX 10 10 LYS A 221 GLU A 223 5 3 HELIX 11 11 VAL A 236 THR A 241 5 6 HELIX 12 12 ILE A 260 SER A 273 1 14 HELIX 13 13 SER A 316 TYR A 319 1 4 HELIX 14 14 GLY A 321 ARG A 332 1 12 HELIX 15 15 LYS A 352 SER A 365 1 14 HELIX 16 16 ASN A 377 THR A 385 1 9 HELIX 17 17 GLY A 396 VAL A 404 1 9 HELIX 18 18 TRP A 445 ASN A 447 5 3 HELIX 19 19 ASN A 465 THR A 475 1 11 HELIX 20 20 ARG A 497 CYS A 499 5 3 HELIX 21 21 GLY A 523 GLU A 533 1 11 HELIX 22 22 VAL A 545 ASN A 548 1 4 HELIX 23 23 ASP A 556 ALA A 558 5 3 HELIX 24 24 ARG A 563 ASP A 565 5 3 HELIX 25 25 PRO A 598 PHE A 615 1 18 HELIX 26 26 TYR A 653 CYS A 671 1 19 HELIX 27 27 ASP A 675 PHE A 682 1 8 SHEET 1 A 2 THR A 6 THR A 11 0 SHEET 2 A 2 THR A 33 GLN A 38 1 N THR A 33 O VAL A 7 SHEET 1 B 4 ILE A 57 LEU A 59 0 SHEET 2 B 4 ALA A 251 ARG A 255 -1 N VAL A 253 O ILE A 57 SHEET 3 B 4 LEU A 74 VAL A 81 -1 N ALA A 78 O VAL A 252 SHEET 4 B 4 MET A 306 ARG A 309 -1 N LYS A 308 O ALA A 79 SHEET 1 C 4 ALA A 206 LYS A 209 0 SHEET 2 C 4 ALA A 94 LYS A 99 -1 N VAL A 97 O ALA A 206 SHEET 3 C 4 TYR A 224 CYS A 228 -1 N GLU A 225 O VAL A 98 SHEET 4 C 4 SER A 232 PRO A 235 -1 N GLN A 234 O LEU A 226 SHEET 1 D 2 THR A 113 CYS A 115 0 SHEET 2 D 2 ALA A 158 CYS A 160 1 N ALA A 158 O SER A 114 SHEET 1 E 2 ILE A 345 VAL A 350 0 SHEET 2 E 2 VAL A 369 LEU A 374 1 N GLU A 370 O ILE A 345 SHEET 1 F 3 ALA A 391 LEU A 394 0 SHEET 2 F 3 ALA A 593 ARG A 597 -1 N VAL A 595 O ILE A 392 SHEET 3 F 3 LEU A 407 PRO A 409 -1 N VAL A 408 O ALA A 596 SHEET 1 G 2 VAL A 411 SER A 414 0 SHEET 2 G 2 CYS A 643 LYS A 646 -1 N VAL A 645 O GLY A 412 SHEET 1 H 6 ARG A 575 LYS A 577 0 SHEET 2 H 6 GLU A 567 LEU A 569 -1 N LEU A 568 O ALA A 576 SHEET 3 H 6 VAL A 434 VAL A 437 -1 N VAL A 437 O GLU A 567 SHEET 4 H 6 VAL A 537 ILE A 540 -1 N ILE A 540 O VAL A 434 SHEET 5 H 6 LYS A 452 HIS A 455 1 N CYS A 454 O VAL A 537 SHEET 6 H 6 GLU A 486 ALA A 489 1 N GLU A 486 O SER A 453 SSBOND 1 CYS A 20 CYS A 36 1555 1555 2.73 SSBOND 2 CYS A 115 CYS A 197 1555 1555 2.71 SSBOND 3 CYS A 228 CYS A 242 1555 1555 2.63 SSBOND 4 CYS A 348 CYS A 380 1555 1555 2.55 SSBOND 5 CYS A 405 CYS A 680 1555 1555 2.57 SSBOND 6 CYS A 454 CYS A 530 1555 1555 2.75 SSBOND 7 CYS A 478 CYS A 671 1555 1555 2.73 SSBOND 8 CYS A 488 CYS A 502 1555 1555 2.77 SSBOND 9 CYS A 499 CYS A 513 1555 1555 2.68 SSBOND 10 CYS A 570 CYS A 584 1555 1555 2.60 CISPEP 1 ALA A 70 PRO A 71 0 25.18 CRYST1 77.620 98.740 126.960 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012883 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010128 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007876 0.00000