data_1APG # _entry.id 1APG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1APG RCSB PR0058 WWPDB D_1000171096 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2011-08-31 _pdbx_database_PDB_obs_spr.pdb_id 3RTJ _pdbx_database_PDB_obs_spr.replace_pdb_id 1APG _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 1APG _pdbx_database_status.recvd_initial_deposition_date 1992-06-16 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Monzingo, A.F.' 1 'Robertus, J.D.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'X-ray analysis of substrate analogs in the ricin A-chain active site.' J.Mol.Biol. 227 1136 1145 1992 JMOBAK UK 0022-2836 0070 ? 1433290 '10.1016/0022-2836(92)90526-P' 1 'Structure of Ricin A-Chain at 2.5 Angstroms' Proteins 10 251 ? 1991 PSFGEY US 0887-3585 0867 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Monzingo, A.F.' 1 primary 'Robertus, J.D.' 2 1 'Katzin, B.J.' 3 1 'Collins, E.J.' 4 1 'Robertus, J.D.' 5 # _cell.entry_id 1APG _cell.length_a 72.740 _cell.length_b 78.490 _cell.length_c 114.340 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1APG _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*AP*G)-3') ; 629.454 1 ? ? ? ? 2 polymer man RICIN 29936.758 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no AG AG D ? 2 'polypeptide(L)' no no ;IFPKQYPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNHAELSVTLALDVTNAY VVGYRAGNSAYFFHPDNQEDAEAITHLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTGGTQ LPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGSKF SVYDVSILIPIIALMVYRCAPPPSSQF ; ;IFPKQYPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNHAELSVTLALDVTNAY VVGYRAGNSAYFFHPDNQEDAEAITHLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTGGTQ LPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGSKF SVYDVSILIPIIALMVYRCAPPPSSQF ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 A n 1 2 G n 2 1 ILE n 2 2 PHE n 2 3 PRO n 2 4 LYS n 2 5 GLN n 2 6 TYR n 2 7 PRO n 2 8 ILE n 2 9 ILE n 2 10 ASN n 2 11 PHE n 2 12 THR n 2 13 THR n 2 14 ALA n 2 15 GLY n 2 16 ALA n 2 17 THR n 2 18 VAL n 2 19 GLN n 2 20 SER n 2 21 TYR n 2 22 THR n 2 23 ASN n 2 24 PHE n 2 25 ILE n 2 26 ARG n 2 27 ALA n 2 28 VAL n 2 29 ARG n 2 30 GLY n 2 31 ARG n 2 32 LEU n 2 33 THR n 2 34 THR n 2 35 GLY n 2 36 ALA n 2 37 ASP n 2 38 VAL n 2 39 ARG n 2 40 HIS n 2 41 GLU n 2 42 ILE n 2 43 PRO n 2 44 VAL n 2 45 LEU n 2 46 PRO n 2 47 ASN n 2 48 ARG n 2 49 VAL n 2 50 GLY n 2 51 LEU n 2 52 PRO n 2 53 ILE n 2 54 ASN n 2 55 GLN n 2 56 ARG n 2 57 PHE n 2 58 ILE n 2 59 LEU n 2 60 VAL n 2 61 GLU n 2 62 LEU n 2 63 SER n 2 64 ASN n 2 65 HIS n 2 66 ALA n 2 67 GLU n 2 68 LEU n 2 69 SER n 2 70 VAL n 2 71 THR n 2 72 LEU n 2 73 ALA n 2 74 LEU n 2 75 ASP n 2 76 VAL n 2 77 THR n 2 78 ASN n 2 79 ALA n 2 80 TYR n 2 81 VAL n 2 82 VAL n 2 83 GLY n 2 84 TYR n 2 85 ARG n 2 86 ALA n 2 87 GLY n 2 88 ASN n 2 89 SER n 2 90 ALA n 2 91 TYR n 2 92 PHE n 2 93 PHE n 2 94 HIS n 2 95 PRO n 2 96 ASP n 2 97 ASN n 2 98 GLN n 2 99 GLU n 2 100 ASP n 2 101 ALA n 2 102 GLU n 2 103 ALA n 2 104 ILE n 2 105 THR n 2 106 HIS n 2 107 LEU n 2 108 PHE n 2 109 THR n 2 110 ASP n 2 111 VAL n 2 112 GLN n 2 113 ASN n 2 114 ARG n 2 115 TYR n 2 116 THR n 2 117 PHE n 2 118 ALA n 2 119 PHE n 2 120 GLY n 2 121 GLY n 2 122 ASN n 2 123 TYR n 2 124 ASP n 2 125 ARG n 2 126 LEU n 2 127 GLU n 2 128 GLN n 2 129 LEU n 2 130 ALA n 2 131 GLY n 2 132 ASN n 2 133 LEU n 2 134 ARG n 2 135 GLU n 2 136 ASN n 2 137 ILE n 2 138 GLU n 2 139 LEU n 2 140 GLY n 2 141 ASN n 2 142 GLY n 2 143 PRO n 2 144 LEU n 2 145 GLU n 2 146 GLU n 2 147 ALA n 2 148 ILE n 2 149 SER n 2 150 ALA n 2 151 LEU n 2 152 TYR n 2 153 TYR n 2 154 TYR n 2 155 SER n 2 156 THR n 2 157 GLY n 2 158 GLY n 2 159 THR n 2 160 GLN n 2 161 LEU n 2 162 PRO n 2 163 THR n 2 164 LEU n 2 165 ALA n 2 166 ARG n 2 167 SER n 2 168 PHE n 2 169 ILE n 2 170 ILE n 2 171 CYS n 2 172 ILE n 2 173 GLN n 2 174 MET n 2 175 ILE n 2 176 SER n 2 177 GLU n 2 178 ALA n 2 179 ALA n 2 180 ARG n 2 181 PHE n 2 182 GLN n 2 183 TYR n 2 184 ILE n 2 185 GLU n 2 186 GLY n 2 187 GLU n 2 188 MET n 2 189 ARG n 2 190 THR n 2 191 ARG n 2 192 ILE n 2 193 ARG n 2 194 TYR n 2 195 ASN n 2 196 ARG n 2 197 ARG n 2 198 SER n 2 199 ALA n 2 200 PRO n 2 201 ASP n 2 202 PRO n 2 203 SER n 2 204 VAL n 2 205 ILE n 2 206 THR n 2 207 LEU n 2 208 GLU n 2 209 ASN n 2 210 SER n 2 211 TRP n 2 212 GLY n 2 213 ARG n 2 214 LEU n 2 215 SER n 2 216 THR n 2 217 ALA n 2 218 ILE n 2 219 GLN n 2 220 GLU n 2 221 SER n 2 222 ASN n 2 223 GLN n 2 224 GLY n 2 225 ALA n 2 226 PHE n 2 227 ALA n 2 228 SER n 2 229 PRO n 2 230 ILE n 2 231 GLN n 2 232 LEU n 2 233 GLN n 2 234 ARG n 2 235 ARG n 2 236 ASN n 2 237 GLY n 2 238 SER n 2 239 LYS n 2 240 PHE n 2 241 SER n 2 242 VAL n 2 243 TYR n 2 244 ASP n 2 245 VAL n 2 246 SER n 2 247 ILE n 2 248 LEU n 2 249 ILE n 2 250 PRO n 2 251 ILE n 2 252 ILE n 2 253 ALA n 2 254 LEU n 2 255 MET n 2 256 VAL n 2 257 TYR n 2 258 ARG n 2 259 CYS n 2 260 ALA n 2 261 PRO n 2 262 PRO n 2 263 PRO n 2 264 SER n 2 265 SER n 2 266 GLN n 2 267 PHE n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'castor bean' _entity_src_gen.gene_src_genus Ricinus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Ricinus communis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3988 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP RICI_RICCO 2 P02879 1 ;MKPGGNTIVIWMYAVATWLCFGSTSGWSFTLEDNNIFPKQYPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVL PNRVGLPINQRFILVELSNHAELSVTLALDVTNAYVVGYRAGNSAYFFHPDNQEDAEAITHLFTDVQNRYTFAFGGNYDR LEQLAGNLRENIELGNGPLEEAISALYYYSTGGTQLPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVI TLENSWGRLSTAIQESNQGAFASPIQLQRRNGSKFSVYDVSILIPIIALMVYRCAPPPSSQFSLLIRPVVPNFNADVCMD PEPIVRIVGRNGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLKRDNTIRSNGKCLTTYGYSPGVYVMIYDCNTAATD ATRWQIWDNGTIINPRSSLVLAATSGNSGTTLTVQTNIYAVSQGWLPTNNTQPFVTTIVGLYGLCLQANSGQVWIEDCSS EKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRWMFKNDGTILNLYSGLVLDVRASDPSLKQII LYPLHGDPNQIWLPLF ; ? 2 PDB 1APG 1 1APG ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1APG A 1 ? 267 ? P02879 36 ? 302 ? 1 267 2 2 1APG D 1 ? 2 ? 1APG 701 ? 702 ? 701 702 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1APG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 5.34 _exptl_crystal.density_percent_sol 76.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1APG _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 3.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1980000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1980000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;The pdb file for this entry does not contain complete asymmetric unit. In order to get satisfactory sfcheck results, the B chain from entry 2AAI must be added in this pdb file prior to calculating R-factor. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2114 _refine_hist.pdbx_number_atoms_nucleic_acid 42 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2156 _refine_hist.d_res_high 3.0 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 4.0 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1APG _struct.title 'X-RAY ANALYSIS OF SUBSTRATE ANALOGS IN THE RICIN A-CHAIN ACTIVE SITE' _struct.pdbx_descriptor ;RICIN (A CHAIN) COMPLEX WITH ADENYL(3'-->5')GUANOSINE (APG) ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1APG _struct_keywords.pdbx_keywords GLYCOSIDASE _struct_keywords.text GLYCOSIDASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A VAL B 18 ? LEU B 32 ? VAL A 18 LEU A 32 1 ? 15 HELX_P HELX_P2 B GLU B 99 ? ILE B 104 ? GLU A 99 ILE A 104 1 ? 6 HELX_P HELX_P3 C ASN B 122 ? GLU B 127 ? ASN A 122 GLU A 127 1 ? 6 HELX_P HELX_P4 D ASN B 141 ? TYR B 152 ? ASN A 141 TYR A 152 1 ? 12 HELX_P HELX_P5 E LEU B 161 ? ARG B 180 ? LEU A 161 ARG A 180 1 ? 20 HELX_P HELX_P6 F ILE B 184 ? ILE B 192 ? ILE A 184 ILE A 192 1 ? 9 HELX_P HELX_P7 G PRO B 202 ? SER B 210 ? PRO A 202 SER A 210 1 ? 9 HELX_P HELX_P8 H TRP B 211 ? GLN B 219 ? TRP A 211 GLN A 219 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id 1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense 1 1 2 ? parallel 1 2 3 ? anti-parallel 1 3 4 ? anti-parallel 1 4 5 ? anti-parallel 1 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id 1 1 PRO B 7 ? THR B 13 ? PRO A 7 THR A 13 1 2 LEU B 59 ? ASN B 64 ? LEU A 59 ASN A 64 1 3 LEU B 68 ? ALA B 73 ? LEU A 68 ALA A 73 1 4 VAL B 82 ? ALA B 86 ? VAL A 82 ALA A 86 1 5 SER B 89 ? PHE B 93 ? SER A 89 PHE A 93 1 6 TYR B 115 ? PHE B 117 ? TYR A 115 PHE A 117 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id 1 1 2 O PRO B 7 ? O PRO A 7 N LEU B 59 ? N LEU A 59 1 2 3 N ASN B 64 ? N ASN A 64 O LEU B 68 ? O LEU A 68 1 3 4 N ALA B 73 ? N ALA A 73 O GLY B 83 ? O GLY A 83 1 4 5 O ALA B 86 ? O ALA A 86 N SER B 89 ? N SER A 89 1 5 6 O ALA B 90 ? O ALA A 90 N TYR B 115 ? N TYR A 115 # _database_PDB_matrix.entry_id 1APG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1APG _atom_sites.fract_transf_matrix[1][1] 0.013748 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012740 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008746 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text 'PRO A 262 - PRO A 263 OMEGA ANGLE = 250.138 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION' # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 A 1 701 701 A A D . n A 1 2 G 2 702 702 G G D . n B 2 1 ILE 1 1 1 ILE ILE A . n B 2 2 PHE 2 2 2 PHE PHE A . n B 2 3 PRO 3 3 3 PRO PRO A . n B 2 4 LYS 4 4 4 LYS LYS A . n B 2 5 GLN 5 5 5 GLN GLN A . n B 2 6 TYR 6 6 6 TYR TYR A . n B 2 7 PRO 7 7 7 PRO PRO A . n B 2 8 ILE 8 8 8 ILE ILE A . n B 2 9 ILE 9 9 9 ILE ILE A . n B 2 10 ASN 10 10 10 ASN ASN A . n B 2 11 PHE 11 11 11 PHE PHE A . n B 2 12 THR 12 12 12 THR THR A . n B 2 13 THR 13 13 13 THR THR A . n B 2 14 ALA 14 14 14 ALA ALA A . n B 2 15 GLY 15 15 15 GLY GLY A . n B 2 16 ALA 16 16 16 ALA ALA A . n B 2 17 THR 17 17 17 THR THR A . n B 2 18 VAL 18 18 18 VAL VAL A . n B 2 19 GLN 19 19 19 GLN GLN A . n B 2 20 SER 20 20 20 SER SER A . n B 2 21 TYR 21 21 21 TYR TYR A . n B 2 22 THR 22 22 22 THR THR A . n B 2 23 ASN 23 23 23 ASN ASN A . n B 2 24 PHE 24 24 24 PHE PHE A . n B 2 25 ILE 25 25 25 ILE ILE A . n B 2 26 ARG 26 26 26 ARG ARG A . n B 2 27 ALA 27 27 27 ALA ALA A . n B 2 28 VAL 28 28 28 VAL VAL A . n B 2 29 ARG 29 29 29 ARG ARG A . n B 2 30 GLY 30 30 30 GLY GLY A . n B 2 31 ARG 31 31 31 ARG ARG A . n B 2 32 LEU 32 32 32 LEU LEU A . n B 2 33 THR 33 33 33 THR THR A . n B 2 34 THR 34 34 34 THR THR A . n B 2 35 GLY 35 35 35 GLY GLY A . n B 2 36 ALA 36 36 36 ALA ALA A . n B 2 37 ASP 37 37 37 ASP ASP A . n B 2 38 VAL 38 38 38 VAL VAL A . n B 2 39 ARG 39 39 39 ARG ARG A . n B 2 40 HIS 40 40 40 HIS HIS A . n B 2 41 GLU 41 41 41 GLU GLU A . n B 2 42 ILE 42 42 42 ILE ILE A . n B 2 43 PRO 43 43 43 PRO PRO A . n B 2 44 VAL 44 44 44 VAL VAL A . n B 2 45 LEU 45 45 45 LEU LEU A . n B 2 46 PRO 46 46 46 PRO PRO A . n B 2 47 ASN 47 47 47 ASN ASN A . n B 2 48 ARG 48 48 48 ARG ARG A . n B 2 49 VAL 49 49 49 VAL VAL A . n B 2 50 GLY 50 50 50 GLY GLY A . n B 2 51 LEU 51 51 51 LEU LEU A . n B 2 52 PRO 52 52 52 PRO PRO A . n B 2 53 ILE 53 53 53 ILE ILE A . n B 2 54 ASN 54 54 54 ASN ASN A . n B 2 55 GLN 55 55 55 GLN GLN A . n B 2 56 ARG 56 56 56 ARG ARG A . n B 2 57 PHE 57 57 57 PHE PHE A . n B 2 58 ILE 58 58 58 ILE ILE A . n B 2 59 LEU 59 59 59 LEU LEU A . n B 2 60 VAL 60 60 60 VAL VAL A . n B 2 61 GLU 61 61 61 GLU GLU A . n B 2 62 LEU 62 62 62 LEU LEU A . n B 2 63 SER 63 63 63 SER SER A . n B 2 64 ASN 64 64 64 ASN ASN A . n B 2 65 HIS 65 65 65 HIS HIS A . n B 2 66 ALA 66 66 66 ALA ALA A . n B 2 67 GLU 67 67 67 GLU GLU A . n B 2 68 LEU 68 68 68 LEU LEU A . n B 2 69 SER 69 69 69 SER SER A . n B 2 70 VAL 70 70 70 VAL VAL A . n B 2 71 THR 71 71 71 THR THR A . n B 2 72 LEU 72 72 72 LEU LEU A . n B 2 73 ALA 73 73 73 ALA ALA A . n B 2 74 LEU 74 74 74 LEU LEU A . n B 2 75 ASP 75 75 75 ASP ASP A . n B 2 76 VAL 76 76 76 VAL VAL A . n B 2 77 THR 77 77 77 THR THR A . n B 2 78 ASN 78 78 78 ASN ASN A . n B 2 79 ALA 79 79 79 ALA ALA A . n B 2 80 TYR 80 80 80 TYR TYR A . n B 2 81 VAL 81 81 81 VAL VAL A . n B 2 82 VAL 82 82 82 VAL VAL A . n B 2 83 GLY 83 83 83 GLY GLY A . n B 2 84 TYR 84 84 84 TYR TYR A . n B 2 85 ARG 85 85 85 ARG ARG A . n B 2 86 ALA 86 86 86 ALA ALA A . n B 2 87 GLY 87 87 87 GLY GLY A . n B 2 88 ASN 88 88 88 ASN ASN A . n B 2 89 SER 89 89 89 SER SER A . n B 2 90 ALA 90 90 90 ALA ALA A . n B 2 91 TYR 91 91 91 TYR TYR A . n B 2 92 PHE 92 92 92 PHE PHE A . n B 2 93 PHE 93 93 93 PHE PHE A . n B 2 94 HIS 94 94 94 HIS HIS A . n B 2 95 PRO 95 95 95 PRO PRO A . n B 2 96 ASP 96 96 96 ASP ASP A . n B 2 97 ASN 97 97 97 ASN ASN A . n B 2 98 GLN 98 98 98 GLN GLN A . n B 2 99 GLU 99 99 99 GLU GLU A . n B 2 100 ASP 100 100 100 ASP ASP A . n B 2 101 ALA 101 101 101 ALA ALA A . n B 2 102 GLU 102 102 102 GLU GLU A . n B 2 103 ALA 103 103 103 ALA ALA A . n B 2 104 ILE 104 104 104 ILE ILE A . n B 2 105 THR 105 105 105 THR THR A . n B 2 106 HIS 106 106 106 HIS HIS A . n B 2 107 LEU 107 107 107 LEU LEU A . n B 2 108 PHE 108 108 108 PHE PHE A . n B 2 109 THR 109 109 109 THR THR A . n B 2 110 ASP 110 110 110 ASP ASP A . n B 2 111 VAL 111 111 111 VAL VAL A . n B 2 112 GLN 112 112 112 GLN GLN A . n B 2 113 ASN 113 113 113 ASN ASN A . n B 2 114 ARG 114 114 114 ARG ARG A . n B 2 115 TYR 115 115 115 TYR TYR A . n B 2 116 THR 116 116 116 THR THR A . n B 2 117 PHE 117 117 117 PHE PHE A . n B 2 118 ALA 118 118 118 ALA ALA A . n B 2 119 PHE 119 119 119 PHE PHE A . n B 2 120 GLY 120 120 120 GLY GLY A . n B 2 121 GLY 121 121 121 GLY GLY A . n B 2 122 ASN 122 122 122 ASN ASN A . n B 2 123 TYR 123 123 123 TYR TYR A . n B 2 124 ASP 124 124 124 ASP ASP A . n B 2 125 ARG 125 125 125 ARG ARG A . n B 2 126 LEU 126 126 126 LEU LEU A . n B 2 127 GLU 127 127 127 GLU GLU A . n B 2 128 GLN 128 128 128 GLN GLN A . n B 2 129 LEU 129 129 129 LEU LEU A . n B 2 130 ALA 130 130 130 ALA ALA A . n B 2 131 GLY 131 131 131 GLY GLY A . n B 2 132 ASN 132 132 132 ASN ASN A . n B 2 133 LEU 133 133 133 LEU LEU A . n B 2 134 ARG 134 134 134 ARG ARG A . n B 2 135 GLU 135 135 135 GLU GLU A . n B 2 136 ASN 136 136 136 ASN ASN A . n B 2 137 ILE 137 137 137 ILE ILE A . n B 2 138 GLU 138 138 138 GLU GLU A . n B 2 139 LEU 139 139 139 LEU LEU A . n B 2 140 GLY 140 140 140 GLY GLY A . n B 2 141 ASN 141 141 141 ASN ASN A . n B 2 142 GLY 142 142 142 GLY GLY A . n B 2 143 PRO 143 143 143 PRO PRO A . n B 2 144 LEU 144 144 144 LEU LEU A . n B 2 145 GLU 145 145 145 GLU GLU A . n B 2 146 GLU 146 146 146 GLU GLU A . n B 2 147 ALA 147 147 147 ALA ALA A . n B 2 148 ILE 148 148 148 ILE ILE A . n B 2 149 SER 149 149 149 SER SER A . n B 2 150 ALA 150 150 150 ALA ALA A . n B 2 151 LEU 151 151 151 LEU LEU A . n B 2 152 TYR 152 152 152 TYR TYR A . n B 2 153 TYR 153 153 153 TYR TYR A . n B 2 154 TYR 154 154 154 TYR TYR A . n B 2 155 SER 155 155 155 SER SER A . n B 2 156 THR 156 156 156 THR THR A . n B 2 157 GLY 157 157 157 GLY GLY A . n B 2 158 GLY 158 158 158 GLY GLY A . n B 2 159 THR 159 159 159 THR THR A . n B 2 160 GLN 160 160 160 GLN GLN A . n B 2 161 LEU 161 161 161 LEU LEU A . n B 2 162 PRO 162 162 162 PRO PRO A . n B 2 163 THR 163 163 163 THR THR A . n B 2 164 LEU 164 164 164 LEU LEU A . n B 2 165 ALA 165 165 165 ALA ALA A . n B 2 166 ARG 166 166 166 ARG ARG A . n B 2 167 SER 167 167 167 SER SER A . n B 2 168 PHE 168 168 168 PHE PHE A . n B 2 169 ILE 169 169 169 ILE ILE A . n B 2 170 ILE 170 170 170 ILE ILE A . n B 2 171 CYS 171 171 171 CYS CYS A . n B 2 172 ILE 172 172 172 ILE ILE A . n B 2 173 GLN 173 173 173 GLN GLN A . n B 2 174 MET 174 174 174 MET MET A . n B 2 175 ILE 175 175 175 ILE ILE A . n B 2 176 SER 176 176 176 SER SER A . n B 2 177 GLU 177 177 177 GLU GLU A . n B 2 178 ALA 178 178 178 ALA ALA A . n B 2 179 ALA 179 179 179 ALA ALA A . n B 2 180 ARG 180 180 180 ARG ARG A . n B 2 181 PHE 181 181 181 PHE PHE A . n B 2 182 GLN 182 182 182 GLN GLN A . n B 2 183 TYR 183 183 183 TYR TYR A . n B 2 184 ILE 184 184 184 ILE ILE A . n B 2 185 GLU 185 185 185 GLU GLU A . n B 2 186 GLY 186 186 186 GLY GLY A . n B 2 187 GLU 187 187 187 GLU GLU A . n B 2 188 MET 188 188 188 MET MET A . n B 2 189 ARG 189 189 189 ARG ARG A . n B 2 190 THR 190 190 190 THR THR A . n B 2 191 ARG 191 191 191 ARG ARG A . n B 2 192 ILE 192 192 192 ILE ILE A . n B 2 193 ARG 193 193 193 ARG ARG A . n B 2 194 TYR 194 194 194 TYR TYR A . n B 2 195 ASN 195 195 195 ASN ASN A . n B 2 196 ARG 196 196 196 ARG ARG A . n B 2 197 ARG 197 197 197 ARG ARG A . n B 2 198 SER 198 198 198 SER SER A . n B 2 199 ALA 199 199 199 ALA ALA A . n B 2 200 PRO 200 200 200 PRO PRO A . n B 2 201 ASP 201 201 201 ASP ASP A . n B 2 202 PRO 202 202 202 PRO PRO A . n B 2 203 SER 203 203 203 SER SER A . n B 2 204 VAL 204 204 204 VAL VAL A . n B 2 205 ILE 205 205 205 ILE ILE A . n B 2 206 THR 206 206 206 THR THR A . n B 2 207 LEU 207 207 207 LEU LEU A . n B 2 208 GLU 208 208 208 GLU GLU A . n B 2 209 ASN 209 209 209 ASN ASN A . n B 2 210 SER 210 210 210 SER SER A . n B 2 211 TRP 211 211 211 TRP TRP A . n B 2 212 GLY 212 212 212 GLY GLY A . n B 2 213 ARG 213 213 213 ARG ARG A . n B 2 214 LEU 214 214 214 LEU LEU A . n B 2 215 SER 215 215 215 SER SER A . n B 2 216 THR 216 216 216 THR THR A . n B 2 217 ALA 217 217 217 ALA ALA A . n B 2 218 ILE 218 218 218 ILE ILE A . n B 2 219 GLN 219 219 219 GLN GLN A . n B 2 220 GLU 220 220 220 GLU GLU A . n B 2 221 SER 221 221 221 SER SER A . n B 2 222 ASN 222 222 222 ASN ASN A . n B 2 223 GLN 223 223 223 GLN GLN A . n B 2 224 GLY 224 224 224 GLY GLY A . n B 2 225 ALA 225 225 225 ALA ALA A . n B 2 226 PHE 226 226 226 PHE PHE A . n B 2 227 ALA 227 227 227 ALA ALA A . n B 2 228 SER 228 228 228 SER SER A . n B 2 229 PRO 229 229 229 PRO PRO A . n B 2 230 ILE 230 230 230 ILE ILE A . n B 2 231 GLN 231 231 231 GLN GLN A . n B 2 232 LEU 232 232 232 LEU LEU A . n B 2 233 GLN 233 233 233 GLN GLN A . n B 2 234 ARG 234 234 234 ARG ARG A . n B 2 235 ARG 235 235 235 ARG ARG A . n B 2 236 ASN 236 236 236 ASN ASN A . n B 2 237 GLY 237 237 237 GLY GLY A . n B 2 238 SER 238 238 238 SER SER A . n B 2 239 LYS 239 239 239 LYS LYS A . n B 2 240 PHE 240 240 240 PHE PHE A . n B 2 241 SER 241 241 241 SER SER A . n B 2 242 VAL 242 242 242 VAL VAL A . n B 2 243 TYR 243 243 243 TYR TYR A . n B 2 244 ASP 244 244 244 ASP ASP A . n B 2 245 VAL 245 245 245 VAL VAL A . n B 2 246 SER 246 246 246 SER SER A . n B 2 247 ILE 247 247 247 ILE ILE A . n B 2 248 LEU 248 248 248 LEU LEU A . n B 2 249 ILE 249 249 249 ILE ILE A . n B 2 250 PRO 250 250 250 PRO PRO A . n B 2 251 ILE 251 251 251 ILE ILE A . n B 2 252 ILE 252 252 252 ILE ILE A . n B 2 253 ALA 253 253 253 ALA ALA A . n B 2 254 LEU 254 254 254 LEU LEU A . n B 2 255 MET 255 255 255 MET MET A . n B 2 256 VAL 256 256 256 VAL VAL A . n B 2 257 TYR 257 257 257 TYR TYR A . n B 2 258 ARG 258 258 258 ARG ARG A . n B 2 259 CYS 259 259 259 CYS CYS A . n B 2 260 ALA 260 260 260 ALA ALA A . n B 2 261 PRO 261 261 261 PRO PRO A . n B 2 262 PRO 262 262 262 PRO PRO A . n B 2 263 PRO 263 263 263 PRO PRO A . n B 2 264 SER 264 264 264 SER SER A . n B 2 265 SER 265 265 265 SER SER A . n B 2 266 GLN 266 266 266 GLN GLN A . n B 2 267 PHE 267 267 267 PHE PHE A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-01-31 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-08-31 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 4 'Structure model' repository Obsolete ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Other # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P D G 702 ? ? "O5'" D G 702 ? ? 1.694 1.593 0.101 0.010 N 2 1 NE2 A HIS 40 ? ? CD2 A HIS 40 ? ? 1.293 1.373 -0.080 0.011 N 3 1 NE2 A HIS 65 ? ? CD2 A HIS 65 ? ? 1.306 1.373 -0.067 0.011 N 4 1 NE2 A HIS 106 ? ? CD2 A HIS 106 ? ? 1.301 1.373 -0.072 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C5'" D A 701 ? ? "C4'" D A 701 ? ? "O4'" D A 701 ? ? 116.57 109.80 6.77 0.90 N 2 1 N1 D A 701 ? ? C6 D A 701 ? ? N6 D A 701 ? ? 123.19 118.60 4.59 0.60 N 3 1 "C3'" D A 701 ? ? "O3'" D A 701 ? ? P D G 702 ? ? 131.25 119.70 11.55 1.20 Y 4 1 P D G 702 ? ? "O5'" D G 702 ? ? "C5'" D G 702 ? ? 131.10 120.90 10.20 1.60 N 5 1 "C5'" D G 702 ? ? "C4'" D G 702 ? ? "O4'" D G 702 ? ? 115.91 109.80 6.11 0.90 N 6 1 "O4'" D G 702 ? ? "C1'" D G 702 ? ? N9 D G 702 ? ? 120.42 108.50 11.92 0.70 N 7 1 C8 D G 702 ? ? N9 D G 702 ? ? C4 D G 702 ? ? 103.61 106.40 -2.79 0.40 N 8 1 N A THR 17 ? ? CA A THR 17 ? ? CB A THR 17 ? ? 97.82 110.30 -12.48 1.90 N 9 1 NE A ARG 29 ? ? CZ A ARG 29 ? ? NH1 A ARG 29 ? ? 123.56 120.30 3.26 0.50 N 10 1 NE A ARG 48 ? ? CZ A ARG 48 ? ? NH1 A ARG 48 ? ? 123.42 120.30 3.12 0.50 N 11 1 CA A HIS 65 ? ? C A HIS 65 ? ? N A ALA 66 ? ? 101.80 117.20 -15.40 2.20 Y 12 1 N A GLU 67 ? ? CA A GLU 67 ? ? C A GLU 67 ? ? 128.02 111.00 17.02 2.70 N 13 1 CB A TYR 80 ? ? CG A TYR 80 ? ? CD1 A TYR 80 ? ? 115.95 121.00 -5.05 0.60 N 14 1 NE A ARG 85 ? ? CZ A ARG 85 ? ? NH1 A ARG 85 ? ? 123.48 120.30 3.18 0.50 N 15 1 CB A TYR 123 ? ? CG A TYR 123 ? ? CD2 A TYR 123 ? ? 116.41 121.00 -4.59 0.60 N 16 1 NE A ARG 180 ? ? CZ A ARG 180 ? ? NH1 A ARG 180 ? ? 123.46 120.30 3.16 0.50 N 17 1 NE A ARG 189 ? ? CZ A ARG 189 ? ? NH1 A ARG 189 ? ? 123.58 120.30 3.28 0.50 N 18 1 NE A ARG 189 ? ? CZ A ARG 189 ? ? NH2 A ARG 189 ? ? 116.97 120.30 -3.33 0.50 N 19 1 NE A ARG 191 ? ? CZ A ARG 191 ? ? NH2 A ARG 191 ? ? 116.68 120.30 -3.62 0.50 N 20 1 CD1 A TRP 211 ? ? CG A TRP 211 ? ? CD2 A TRP 211 ? ? 112.58 106.30 6.28 0.80 N 21 1 CB A TRP 211 ? ? CG A TRP 211 ? ? CD1 A TRP 211 ? ? 118.66 127.00 -8.34 1.30 N 22 1 CE2 A TRP 211 ? ? CD2 A TRP 211 ? ? CG A TRP 211 ? ? 101.07 107.30 -6.23 0.80 N 23 1 N A ALA 225 ? ? CA A ALA 225 ? ? C A ALA 225 ? ? 129.43 111.00 18.43 2.70 N 24 1 N A PHE 226 ? ? CA A PHE 226 ? ? C A PHE 226 ? ? 127.37 111.00 16.37 2.70 N 25 1 NE A ARG 234 ? ? CZ A ARG 234 ? ? NH1 A ARG 234 ? ? 124.17 120.30 3.87 0.50 N 26 1 N A SER 238 ? ? CA A SER 238 ? ? C A SER 238 ? ? 127.45 111.00 16.45 2.70 N 27 1 CA A SER 238 ? ? C A SER 238 ? ? N A LYS 239 ? ? 103.93 117.20 -13.27 2.20 Y 28 1 N A LYS 239 ? ? CA A LYS 239 ? ? C A LYS 239 ? ? 135.22 111.00 24.22 2.70 N 29 1 N A PHE 240 ? ? CA A PHE 240 ? ? C A PHE 240 ? ? 130.87 111.00 19.87 2.70 N 30 1 CA A MET 255 ? ? CB A MET 255 ? ? CG A MET 255 ? ? 125.05 113.30 11.75 1.70 N 31 1 NE A ARG 258 ? ? CZ A ARG 258 ? ? NH1 A ARG 258 ? ? 124.04 120.30 3.74 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 3 ? ? -100.15 -113.29 2 1 LYS A 4 ? ? 64.02 -56.73 3 1 GLN A 5 ? ? 84.24 115.00 4 1 ALA A 14 ? ? -38.33 -90.19 5 1 GLU A 41 ? ? 72.47 -17.13 6 1 ALA A 66 ? ? 172.34 52.65 7 1 GLU A 67 ? ? 76.67 -63.15 8 1 ASN A 78 ? ? -159.42 22.79 9 1 ALA A 79 ? ? 47.60 27.46 10 1 LEU A 107 ? ? -79.50 -72.83 11 1 PHE A 108 ? ? -117.37 61.65 12 1 ASN A 113 ? ? -171.74 138.93 13 1 ARG A 134 ? ? -33.58 -24.28 14 1 THR A 159 ? ? 53.84 -120.40 15 1 GLN A 160 ? ? 62.83 92.17 16 1 GLU A 220 ? ? -104.80 57.65 17 1 ASN A 222 ? ? 108.31 -162.39 18 1 PHE A 226 ? ? 29.10 138.40 19 1 LYS A 239 ? ? 4.06 -79.85 20 1 PHE A 240 ? ? -41.30 150.20 21 1 PRO A 263 ? ? -23.11 -155.08 22 1 SER A 265 ? ? -172.81 -49.75 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 PRO _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 262 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PRO _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 263 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -109.86 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id A _pdbx_validate_planes.auth_asym_id D _pdbx_validate_planes.auth_seq_id 701 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.109 _pdbx_validate_planes.type 'SIDE CHAIN' #