data_1AX7 # _entry.id 1AX7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1AX7 pdb_00001ax7 10.2210/pdb1ax7/pdb WWPDB D_1000171365 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-07-01 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 5 'Structure model' 1 4 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other 6 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 6 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 17 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 18 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 19 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1AX7 _pdbx_database_status.recvd_initial_deposition_date 1997-10-30 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mao, B.' 1 'Gu, Z.' 2 'Gorin, A.A.' 3 'Hingerty, B.E.' 4 'Broyde, S.' 5 'Patel, D.J.' 6 # _citation.id primary _citation.title 'Solution structure of the aminofluorene-stacked conformer of the syn [AF]-C8-dG adduct positioned at a template-primer junction.' _citation.journal_abbrev Biochemistry _citation.journal_volume 36 _citation.page_first 14491 _citation.page_last 14501 _citation.year 1997 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9398168 _citation.pdbx_database_id_DOI 10.1021/bi972206r # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mao, B.' 1 ? primary 'Gu, Z.' 2 ? primary 'Gorin, A.' 3 ? primary 'Hingerty, B.E.' 4 ? primary 'Broyde, S.' 5 ? primary 'Patel, D.J.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'DNA DUPLEX D(AAC-[AF]G-CTACCATCC)D(GGATGGTAG)' 3880.552 1 ? ? ? 'N ATOM OF AF-GROUP LINKED TO C8 ATOM OF DG4' 2 polymer syn 'DNA DUPLEX D(AAC-[AF]G-CTACCATCC)D(GGATGGTAG)' 2835.871 1 ? ? ? 'N ATOM OF AF-GROUP LINKED TO C8 ATOM OF DG4' 3 non-polymer syn 2-AMINOFLUORENE 181.233 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DA)(DC)(DG)(DC)(DT)(DA)(DC)(DC)(DA)(DT)(DC)(DC)' AACGCTACCATCC A ? 2 polydeoxyribonucleotide no no '(DG)(DG)(DA)(DT)(DG)(DG)(DT)(DA)(DG)' GGATGGTAG B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 2-AMINOFLUORENE _pdbx_entity_nonpoly.comp_id AF # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DC n 1 4 DG n 1 5 DC n 1 6 DT n 1 7 DA n 1 8 DC n 1 9 DC n 1 10 DA n 1 11 DT n 1 12 DC n 1 13 DC n 2 1 DG n 2 2 DG n 2 3 DA n 2 4 DT n 2 5 DG n 2 6 DG n 2 7 DT n 2 8 DA n 2 9 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AF non-polymer . 2-AMINOFLUORENE ? 'C13 H11 N' 181.233 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA A A . n A 1 2 DA 2 2 2 DA A A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DT 6 6 6 DT T A . n A 1 7 DA 7 7 7 DA A A . n A 1 8 DC 8 8 8 DC C A . n A 1 9 DC 9 9 9 DC C A . n A 1 10 DA 10 10 10 DA A A . n A 1 11 DT 11 11 11 DT T A . n A 1 12 DC 12 12 12 DC C A . n A 1 13 DC 13 13 13 DC C A . n B 2 1 DG 1 14 14 DG G B . n B 2 2 DG 2 15 15 DG G B . n B 2 3 DA 3 16 16 DA A B . n B 2 4 DT 4 17 17 DT T B . n B 2 5 DG 5 18 18 DG G B . n B 2 6 DG 6 19 19 DG G B . n B 2 7 DT 7 20 20 DT T B . n B 2 8 DA 8 21 21 DA A B . n B 2 9 DG 9 22 22 DG G B . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id AF _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 23 _pdbx_nonpoly_scheme.auth_seq_num 23 _pdbx_nonpoly_scheme.pdb_mon_id AF _pdbx_nonpoly_scheme.auth_mon_id AF _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.1 ? 1 X-PLOR refinement 3.1 ? 2 X-PLOR phasing 3.1 ? 3 # _cell.entry_id 1AX7 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AX7 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 1AX7 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 1AX7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1AX7 _struct.title 'SOLUTION STRUCTURE OF THE [AF]-C8-DG ADDUCT POSITIONED AT A TEMPLATE-PRIMER JUNCTION, NMR, 6 STRUCTURES' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1AX7 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DNA DUPLEX, AMINOFLUORENE ADDUCT, CARCINOGEN ADDUCT, TEMPLATE-PRIMER JUNCTION, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1AX7 1AX7 ? ? ? 2 2 PDB 1AX7 1AX7 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1AX7 A 1 ? 13 ? 1AX7 1 ? 13 ? 1 13 2 2 1AX7 B 1 ? 9 ? 1AX7 14 ? 22 ? 14 22 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A DG 4 C8 ? ? ? 1_555 C AF . N ? ? A DG 4 A AF 23 1_555 ? ? ? ? ? ? ? 1.454 ? ? hydrog1 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 5 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 5 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 5 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 6 B DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 6 B DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 7 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 7 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 8 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 8 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 8 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 9 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 9 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 9 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 4 N3 ? ? A DA 10 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 4 O4 ? ? A DA 10 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 11 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 11 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 12 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 12 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 12 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 12 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 12 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 12 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 13 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 13 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 13 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id AF _struct_site.pdbx_auth_seq_id 23 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE AF A 23' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 DA A 2 ? DA A 2 . ? 1_555 ? 2 AC1 4 DG A 4 ? DG A 4 . ? 1_555 ? 3 AC1 4 DC A 5 ? DC A 5 . ? 1_555 ? 4 AC1 4 DG B 9 ? DG B 22 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 6 _pdbx_validate_close_contact.auth_atom_id_1 "O3'" _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 DA _pdbx_validate_close_contact.auth_seq_id_1 2 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 H6 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 DC _pdbx_validate_close_contact.auth_seq_id_2 3 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.59 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C8 A DG 4 ? ? N9 A DG 4 ? ? 1.325 1.374 -0.049 0.007 N 2 1 N1 A DC 5 ? ? C6 A DC 5 ? ? 1.328 1.367 -0.039 0.006 N 3 1 C5 A DT 6 ? ? C7 A DT 6 ? ? 1.539 1.496 0.043 0.006 N 4 1 "C5'" A DC 8 ? ? "C4'" A DC 8 ? ? 1.561 1.512 0.049 0.007 N 5 1 C5 A DT 11 ? ? C7 A DT 11 ? ? 1.536 1.496 0.040 0.006 N 6 1 C5 B DT 17 ? ? C7 B DT 17 ? ? 1.536 1.496 0.040 0.006 N 7 2 N9 A DA 2 ? ? C4 A DA 2 ? ? 1.333 1.374 -0.041 0.006 N 8 2 C8 A DG 4 ? ? N9 A DG 4 ? ? 1.328 1.374 -0.046 0.007 N 9 2 N1 A DC 5 ? ? C6 A DC 5 ? ? 1.320 1.367 -0.047 0.006 N 10 2 C5 A DT 6 ? ? C7 A DT 6 ? ? 1.535 1.496 0.039 0.006 N 11 2 C5 A DT 11 ? ? C7 A DT 11 ? ? 1.534 1.496 0.038 0.006 N 12 2 "C5'" A DC 12 ? ? "C4'" A DC 12 ? ? 1.555 1.512 0.043 0.007 N 13 2 C5 B DT 17 ? ? C7 B DT 17 ? ? 1.539 1.496 0.043 0.006 N 14 3 N9 A DA 2 ? ? C4 A DA 2 ? ? 1.334 1.374 -0.040 0.006 N 15 3 C8 A DG 4 ? ? N9 A DG 4 ? ? 1.324 1.374 -0.050 0.007 N 16 3 N1 A DC 5 ? ? C6 A DC 5 ? ? 1.323 1.367 -0.044 0.006 N 17 3 C5 A DT 6 ? ? C7 A DT 6 ? ? 1.536 1.496 0.040 0.006 N 18 3 C5 A DT 11 ? ? C7 A DT 11 ? ? 1.538 1.496 0.042 0.006 N 19 3 C5 B DT 17 ? ? C7 B DT 17 ? ? 1.542 1.496 0.046 0.006 N 20 3 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.534 1.496 0.038 0.006 N 21 4 N9 A DA 2 ? ? C4 A DA 2 ? ? 1.329 1.374 -0.045 0.006 N 22 4 N1 A DC 5 ? ? C6 A DC 5 ? ? 1.321 1.367 -0.046 0.006 N 23 4 C5 A DT 6 ? ? C7 A DT 6 ? ? 1.542 1.496 0.046 0.006 N 24 4 C5 A DT 11 ? ? C7 A DT 11 ? ? 1.539 1.496 0.043 0.006 N 25 4 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.538 1.496 0.042 0.006 N 26 5 N9 A DA 2 ? ? C4 A DA 2 ? ? 1.332 1.374 -0.042 0.006 N 27 5 C8 A DG 4 ? ? N9 A DG 4 ? ? 1.321 1.374 -0.053 0.007 N 28 5 N1 A DC 5 ? ? C6 A DC 5 ? ? 1.317 1.367 -0.050 0.006 N 29 5 "C5'" A DT 6 ? ? "C4'" A DT 6 ? ? 1.566 1.512 0.054 0.007 N 30 5 C5 A DT 6 ? ? C7 A DT 6 ? ? 1.536 1.496 0.040 0.006 N 31 5 C5 A DT 11 ? ? C7 A DT 11 ? ? 1.535 1.496 0.039 0.006 N 32 5 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.535 1.496 0.039 0.006 N 33 6 C8 A DG 4 ? ? N9 A DG 4 ? ? 1.328 1.374 -0.046 0.007 N 34 6 "C5'" A DC 5 ? ? "C4'" A DC 5 ? ? 1.562 1.512 0.050 0.007 N 35 6 C5 A DT 6 ? ? C7 A DT 6 ? ? 1.543 1.496 0.047 0.006 N 36 6 P B DG 19 ? ? "O5'" B DG 19 ? ? 1.658 1.593 0.065 0.010 N 37 6 "C5'" B DG 19 ? ? "C4'" B DG 19 ? ? 1.560 1.512 0.048 0.007 N 38 6 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.535 1.496 0.039 0.006 N 39 6 "C2'" B DG 22 ? ? "C1'" B DG 22 ? ? 1.581 1.519 0.062 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DA 2 ? ? "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? 100.47 104.50 -4.03 0.40 N 2 1 "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? "O3'" A DA 2 ? ? 129.57 112.30 17.27 2.00 N 3 1 "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? "C2'" A DA 2 ? ? 97.52 102.20 -4.68 0.70 N 4 1 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? "C2'" A DA 2 ? ? 101.06 105.90 -4.84 0.80 N 5 1 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 120.56 108.30 12.26 0.30 N 6 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? "C2'" A DC 3 ? ? 99.70 105.90 -6.20 0.80 N 7 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.04 108.30 2.74 0.30 N 8 1 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 116.73 113.10 3.63 0.50 N 9 1 C5 A DC 5 ? ? C4 A DC 5 ? ? N4 A DC 5 ? ? 125.42 120.20 5.22 0.70 N 10 1 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? "C2'" A DT 6 ? ? 98.37 105.90 -7.53 0.80 N 11 1 "C4'" A DC 8 ? ? "C3'" A DC 8 ? ? "C2'" A DC 8 ? ? 96.43 102.20 -5.77 0.70 N 12 1 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? "C2'" A DC 9 ? ? 96.87 105.90 -9.03 0.80 N 13 1 "C3'" A DA 10 ? ? "C2'" A DA 10 ? ? "C1'" A DA 10 ? ? 97.24 102.40 -5.16 0.80 N 14 1 "O4'" A DA 10 ? ? "C1'" A DA 10 ? ? N9 A DA 10 ? ? 103.09 108.00 -4.91 0.70 N 15 1 "C1'" A DT 11 ? ? "O4'" A DT 11 ? ? "C4'" A DT 11 ? ? 103.24 110.10 -6.86 1.00 N 16 1 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 110.76 108.30 2.46 0.30 N 17 1 N1 A DC 12 ? ? C2 A DC 12 ? ? O2 A DC 12 ? ? 122.66 118.90 3.76 0.60 N 18 1 "C3'" B DG 15 ? ? "C2'" B DG 15 ? ? "C1'" B DG 15 ? ? 97.22 102.40 -5.18 0.80 N 19 1 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 112.29 108.30 3.99 0.30 N 20 1 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? "C2'" B DT 17 ? ? 101.03 105.90 -4.87 0.80 N 21 1 "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? "C1'" B DG 18 ? ? 95.28 102.40 -7.12 0.80 N 22 1 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 111.61 108.30 3.31 0.30 N 23 1 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 112.76 108.30 4.46 0.30 N 24 1 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 112.26 108.30 3.96 0.30 N 25 1 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? N9 B DA 21 ? ? 103.62 108.00 -4.38 0.70 N 26 1 N9 B DG 22 ? ? C4 B DG 22 ? ? C5 B DG 22 ? ? 108.04 105.40 2.64 0.40 N 27 2 "C4'" A DA 1 ? ? "C3'" A DA 1 ? ? "C2'" A DA 1 ? ? 96.45 102.20 -5.75 0.70 N 28 2 "O4'" A DA 2 ? ? "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? 101.95 104.50 -2.55 0.40 N 29 2 "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? "O3'" A DA 2 ? ? 126.44 112.30 14.14 2.00 N 30 2 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 115.62 108.30 7.32 0.30 N 31 2 N9 A DA 2 ? ? C4 A DA 2 ? ? C5 A DA 2 ? ? 108.29 105.80 2.49 0.40 N 32 2 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? "C2'" A DC 3 ? ? 100.34 105.90 -5.56 0.80 N 33 2 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 111.17 108.30 2.87 0.30 N 34 2 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 97.21 102.20 -4.99 0.70 N 35 2 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 116.48 113.10 3.38 0.50 N 36 2 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DC 5 ? ? 129.25 119.70 9.55 1.20 Y 37 2 "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? "C2'" A DC 5 ? ? 97.73 102.20 -4.47 0.70 N 38 2 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 113.10 108.30 4.80 0.30 N 39 2 C5 A DC 5 ? ? C4 A DC 5 ? ? N4 A DC 5 ? ? 125.70 120.20 5.50 0.70 N 40 2 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 102.86 108.00 -5.14 0.70 N 41 2 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? "C2'" A DA 7 ? ? 99.26 105.90 -6.64 0.80 N 42 2 "C4'" A DC 8 ? ? "C3'" A DC 8 ? ? "C2'" A DC 8 ? ? 96.88 102.20 -5.32 0.70 N 43 2 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? "C2'" A DC 9 ? ? 98.23 105.90 -7.67 0.80 N 44 2 N1 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 122.72 118.90 3.82 0.60 N 45 2 "C1'" A DT 11 ? ? "O4'" A DT 11 ? ? "C4'" A DT 11 ? ? 102.00 110.10 -8.10 1.00 N 46 2 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 117.95 122.90 -4.95 0.60 N 47 2 "C5'" A DC 12 ? ? "C4'" A DC 12 ? ? "C3'" A DC 12 ? ? 123.53 115.70 7.83 1.20 N 48 2 "C4'" A DC 12 ? ? "C3'" A DC 12 ? ? "C2'" A DC 12 ? ? 96.67 102.20 -5.53 0.70 N 49 2 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 110.36 108.30 2.06 0.30 N 50 2 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 103.53 108.00 -4.47 0.70 N 51 2 "C3'" B DG 15 ? ? "C2'" B DG 15 ? ? "C1'" B DG 15 ? ? 96.24 102.40 -6.16 0.80 N 52 2 "C1'" B DT 17 ? ? "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? 104.07 110.10 -6.03 1.00 N 53 2 "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? "C1'" B DG 18 ? ? 97.14 102.40 -5.26 0.80 N 54 2 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? "C2'" B DG 18 ? ? 99.92 105.90 -5.98 0.80 N 55 2 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 100.15 105.90 -5.75 0.80 N 56 2 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 118.74 122.90 -4.16 0.60 N 57 2 "O4'" B DG 22 ? ? "C4'" B DG 22 ? ? "C3'" B DG 22 ? ? 100.94 104.50 -3.56 0.40 N 58 2 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 110.39 108.30 2.09 0.30 N 59 2 N9 B DG 22 ? ? C4 B DG 22 ? ? C5 B DG 22 ? ? 108.50 105.40 3.10 0.40 N 60 2 N3 B DG 22 ? ? C4 B DG 22 ? ? N9 B DG 22 ? ? 121.76 126.00 -4.24 0.60 N 61 3 "C4'" A DA 1 ? ? "C3'" A DA 1 ? ? "C2'" A DA 1 ? ? 97.44 102.20 -4.76 0.70 N 62 3 "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? "O3'" A DA 2 ? ? 128.38 112.30 16.08 2.00 N 63 3 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 115.59 108.30 7.29 0.30 N 64 3 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? "C2'" A DC 3 ? ? 99.57 105.90 -6.33 0.80 N 65 3 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 111.75 108.30 3.45 0.30 N 66 3 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 97.08 102.20 -5.12 0.70 N 67 3 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.91 108.30 3.61 0.30 N 68 3 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 117.11 113.10 4.01 0.50 N 69 3 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 104.00 106.40 -2.40 0.40 N 70 3 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 110.34 108.30 2.04 0.30 N 71 3 N3 A DC 5 ? ? C4 A DC 5 ? ? N4 A DC 5 ? ? 111.88 118.00 -6.12 0.70 N 72 3 C5 A DC 5 ? ? C4 A DC 5 ? ? N4 A DC 5 ? ? 126.78 120.20 6.58 0.70 N 73 3 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? "C2'" A DT 6 ? ? 99.86 105.90 -6.04 0.80 N 74 3 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.80 108.30 2.50 0.30 N 75 3 "C5'" A DC 8 ? ? "C4'" A DC 8 ? ? "C3'" A DC 8 ? ? 126.35 115.70 10.65 1.20 N 76 3 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 103.21 108.00 -4.79 0.70 N 77 3 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? "C2'" A DC 9 ? ? 99.41 105.90 -6.49 0.80 N 78 3 "C1'" A DT 11 ? ? "O4'" A DT 11 ? ? "C4'" A DT 11 ? ? 103.26 110.10 -6.84 1.00 N 79 3 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 103.07 108.00 -4.93 0.70 N 80 3 N1 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 122.69 118.90 3.79 0.60 N 81 3 "C4'" B DG 15 ? ? "C3'" B DG 15 ? ? "C2'" B DG 15 ? ? 97.88 102.20 -4.32 0.70 N 82 3 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 111.48 108.30 3.18 0.30 N 83 3 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? "C2'" B DT 17 ? ? 101.09 105.90 -4.81 0.80 N 84 3 "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? "C1'" B DG 18 ? ? 96.40 102.40 -6.00 0.80 N 85 3 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 114.77 108.30 6.47 0.30 N 86 3 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 111.82 108.30 3.52 0.30 N 87 3 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? "C2'" B DA 21 ? ? 100.07 105.90 -5.83 0.80 N 88 3 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? N9 B DA 21 ? ? 111.02 108.30 2.72 0.30 N 89 3 N9 B DG 22 ? ? C4 B DG 22 ? ? C5 B DG 22 ? ? 107.85 105.40 2.45 0.40 N 90 4 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 115.22 108.30 6.92 0.30 N 91 4 N9 A DA 2 ? ? C4 A DA 2 ? ? C5 A DA 2 ? ? 108.93 105.80 3.13 0.40 N 92 4 N3 A DA 2 ? ? C4 A DA 2 ? ? N9 A DA 2 ? ? 122.46 127.40 -4.94 0.80 N 93 4 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 112.71 108.30 4.41 0.30 N 94 4 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.36 108.30 3.06 0.30 N 95 4 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DC 5 ? ? 129.97 119.70 10.27 1.20 Y 96 4 "O4'" A DC 5 ? ? "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? 101.53 104.50 -2.97 0.40 N 97 4 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.43 108.30 3.13 0.30 N 98 4 N3 A DC 5 ? ? C4 A DC 5 ? ? N4 A DC 5 ? ? 112.12 118.00 -5.88 0.70 N 99 4 C5 A DC 5 ? ? C4 A DC 5 ? ? N4 A DC 5 ? ? 127.08 120.20 6.88 0.70 N 100 4 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 118.39 122.90 -4.51 0.60 N 101 4 "C1'" A DA 7 ? ? "O4'" A DA 7 ? ? "C4'" A DA 7 ? ? 103.14 110.10 -6.96 1.00 N 102 4 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? "C2'" A DA 7 ? ? 98.86 105.90 -7.04 0.80 N 103 4 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 112.88 108.30 4.58 0.30 N 104 4 N1 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 122.86 118.90 3.96 0.60 N 105 4 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? "C2'" A DC 9 ? ? 97.04 105.90 -8.86 0.80 N 106 4 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 111.01 108.30 2.71 0.30 N 107 4 N1 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 123.19 118.90 4.29 0.60 N 108 4 "C3'" A DA 10 ? ? "C2'" A DA 10 ? ? "C1'" A DA 10 ? ? 97.51 102.40 -4.89 0.80 N 109 4 "C1'" A DT 11 ? ? "O4'" A DT 11 ? ? "C4'" A DT 11 ? ? 101.74 110.10 -8.36 1.00 N 110 4 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 100.75 105.90 -5.15 0.80 N 111 4 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 111.86 108.30 3.56 0.30 N 112 4 "C1'" B DT 17 ? ? "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? 100.32 110.10 -9.78 1.00 N 113 4 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? N1 B DT 17 ? ? 112.49 108.30 4.19 0.30 N 114 4 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 118.91 122.90 -3.99 0.60 N 115 4 "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? "C1'" B DG 18 ? ? 95.75 102.40 -6.65 0.80 N 116 4 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 111.63 108.30 3.33 0.30 N 117 4 "C3'" B DG 18 ? ? "O3'" B DG 18 ? ? P B DG 19 ? ? 127.65 119.70 7.95 1.20 Y 118 4 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 111.06 108.30 2.76 0.30 N 119 4 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 98.55 105.90 -7.35 0.80 N 120 4 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 102.95 108.00 -5.05 0.70 N 121 4 C5 B DT 20 ? ? C4 B DT 20 ? ? O4 B DT 20 ? ? 129.24 124.90 4.34 0.70 N 122 4 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 118.04 122.90 -4.86 0.60 N 123 4 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? "C2'" B DA 21 ? ? 99.25 105.90 -6.65 0.80 N 124 4 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? N9 B DA 21 ? ? 110.22 108.30 1.92 0.30 N 125 4 "C3'" B DA 21 ? ? "O3'" B DA 21 ? ? P B DG 22 ? ? 129.92 119.70 10.22 1.20 Y 126 4 N9 B DG 22 ? ? C4 B DG 22 ? ? C5 B DG 22 ? ? 108.44 105.40 3.04 0.40 N 127 4 N3 B DG 22 ? ? C4 B DG 22 ? ? N9 B DG 22 ? ? 122.35 126.00 -3.65 0.60 N 128 5 "C4'" A DA 1 ? ? "C3'" A DA 1 ? ? "C2'" A DA 1 ? ? 96.99 102.20 -5.21 0.70 N 129 5 "O4'" A DA 2 ? ? "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? 101.25 104.50 -3.25 0.40 N 130 5 "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? "O3'" A DA 2 ? ? 125.91 112.30 13.61 2.00 N 131 5 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 115.52 108.30 7.22 0.30 N 132 5 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? "C2'" A DC 3 ? ? 99.40 105.90 -6.50 0.80 N 133 5 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 111.85 108.30 3.55 0.30 N 134 5 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 96.62 102.20 -5.58 0.70 N 135 5 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.94 108.30 3.64 0.30 N 136 5 "C5'" A DC 5 ? ? "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? 123.59 115.70 7.89 1.20 N 137 5 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 112.08 108.30 3.78 0.30 N 138 5 N3 A DC 5 ? ? C4 A DC 5 ? ? N4 A DC 5 ? ? 113.66 118.00 -4.34 0.70 N 139 5 C5 A DC 5 ? ? C4 A DC 5 ? ? N4 A DC 5 ? ? 125.91 120.20 5.71 0.70 N 140 5 "C5'" A DT 6 ? ? "C4'" A DT 6 ? ? "C3'" A DT 6 ? ? 125.10 115.70 9.40 1.20 N 141 5 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 103.53 108.00 -4.47 0.70 N 142 5 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? "C2'" A DA 7 ? ? 100.43 105.90 -5.47 0.80 N 143 5 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? "C2'" A DC 8 ? ? 97.53 105.90 -8.37 0.80 N 144 5 "C4'" A DC 9 ? ? "C3'" A DC 9 ? ? "C2'" A DC 9 ? ? 97.64 102.20 -4.56 0.70 N 145 5 "O4'" A DA 10 ? ? "C1'" A DA 10 ? ? N9 A DA 10 ? ? 110.98 108.30 2.68 0.30 N 146 5 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? "C2'" A DC 12 ? ? 101.08 105.90 -4.82 0.80 N 147 5 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 111.50 108.30 3.20 0.30 N 148 5 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 102.03 108.00 -5.97 0.70 N 149 5 N1 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 122.68 118.90 3.78 0.60 N 150 5 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 110.71 108.30 2.41 0.30 N 151 5 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 114.09 108.30 5.79 0.30 N 152 5 "O4'" B DA 16 ? ? "C1'" B DA 16 ? ? N9 B DA 16 ? ? 111.06 108.30 2.76 0.30 N 153 5 "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? "C1'" B DG 18 ? ? 96.79 102.40 -5.61 0.80 N 154 5 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 112.67 108.30 4.37 0.30 N 155 5 "C3'" B DG 18 ? ? "O3'" B DG 18 ? ? P B DG 19 ? ? 126.93 119.70 7.23 1.20 Y 156 5 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 114.88 108.30 6.58 0.30 N 157 5 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? N9 B DA 21 ? ? 103.62 108.00 -4.38 0.70 N 158 5 "O4'" B DG 22 ? ? "C4'" B DG 22 ? ? "C3'" B DG 22 ? ? 101.29 104.50 -3.21 0.40 N 159 5 N9 B DG 22 ? ? C4 B DG 22 ? ? C5 B DG 22 ? ? 107.98 105.40 2.58 0.40 N 160 6 "C4'" A DA 1 ? ? "C3'" A DA 1 ? ? "C2'" A DA 1 ? ? 96.81 102.20 -5.39 0.70 N 161 6 "O4'" A DA 2 ? ? "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? 98.28 104.50 -6.22 0.40 N 162 6 "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? "O3'" A DA 2 ? ? 130.07 112.30 17.77 2.00 N 163 6 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 117.45 108.30 9.15 0.30 N 164 6 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? "C2'" A DC 3 ? ? 99.43 105.90 -6.47 0.80 N 165 6 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 113.02 108.30 4.72 0.30 N 166 6 P A DG 4 ? ? "O5'" A DG 4 ? ? "C5'" A DG 4 ? ? 131.76 120.90 10.86 1.60 N 167 6 "O4'" A DG 4 ? ? "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? 99.14 104.50 -5.36 0.40 N 168 6 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 116.67 113.10 3.57 0.50 N 169 6 "O4'" A DC 5 ? ? "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? 98.46 104.50 -6.04 0.40 N 170 6 "C3'" A DC 5 ? ? "C2'" A DC 5 ? ? "C1'" A DC 5 ? ? 97.29 102.40 -5.11 0.80 N 171 6 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? "C2'" A DT 6 ? ? 99.06 105.90 -6.84 0.80 N 172 6 "C1'" A DA 7 ? ? "O4'" A DA 7 ? ? "C4'" A DA 7 ? ? 102.74 110.10 -7.36 1.00 N 173 6 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? "C2'" A DA 7 ? ? 100.76 105.90 -5.14 0.80 N 174 6 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 117.45 108.30 9.15 0.30 N 175 6 "C3'" A DA 7 ? ? "O3'" A DA 7 ? ? P A DC 8 ? ? 128.19 119.70 8.49 1.20 Y 176 6 N1 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 122.70 118.90 3.80 0.60 N 177 6 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? "C2'" A DC 9 ? ? 99.82 105.90 -6.08 0.80 N 178 6 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 115.83 108.30 7.53 0.30 N 179 6 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 103.58 108.00 -4.42 0.70 N 180 6 N1 A DC 12 ? ? C2 A DC 12 ? ? O2 A DC 12 ? ? 122.97 118.90 4.07 0.60 N 181 6 "C4'" B DG 14 ? ? "C3'" B DG 14 ? ? "C2'" B DG 14 ? ? 97.85 102.20 -4.35 0.70 N 182 6 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 110.36 108.30 2.06 0.30 N 183 6 "C3'" B DG 15 ? ? "C2'" B DG 15 ? ? "C1'" B DG 15 ? ? 97.38 102.40 -5.02 0.80 N 184 6 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 112.35 108.30 4.05 0.30 N 185 6 "C5'" B DG 18 ? ? "C4'" B DG 18 ? ? "C3'" B DG 18 ? ? 123.97 115.70 8.27 1.20 N 186 6 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? "C2'" B DG 18 ? ? 99.83 105.90 -6.07 0.80 N 187 6 "C5'" B DG 19 ? ? "C4'" B DG 19 ? ? "C3'" B DG 19 ? ? 126.84 115.70 11.14 1.20 N 188 6 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 113.48 108.30 5.18 0.30 N 189 6 "C3'" B DA 21 ? ? "O3'" B DA 21 ? ? P B DG 22 ? ? 129.23 119.70 9.53 1.20 Y 190 6 "O4'" B DG 22 ? ? "C4'" B DG 22 ? ? "C3'" B DG 22 ? ? 99.11 104.50 -5.39 0.40 N 191 6 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 111.20 108.30 2.90 0.30 N # _pdbx_nmr_ensemble.entry_id 1AX7 _pdbx_nmr_ensemble.conformers_calculated_total_number 6 _pdbx_nmr_ensemble.conformers_submitted_total_number 6 _pdbx_nmr_ensemble.conformer_selection_criteria 'ALL CONFORMERS PRESENTED' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 322 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 NOESY 1 2 1 COSY 1 3 1 TOCSY 1 # _pdbx_nmr_refine.entry_id 1AX7 _pdbx_nmr_refine.method 'RELAXATION MATRIX REFINEMENT' _pdbx_nmr_refine.details 'REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.' _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR 3.1 BRUNGER 1 'structure solution' VNMR ? ? 2 'structure solution' DUPLEX ? ? 3 'structure solution' X-PLOR ? ? 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AF N N N N 1 AF C2 C Y N 2 AF C3 C Y N 3 AF C4 C Y N 4 AF C4A C Y N 5 AF C4B C Y N 6 AF C5 C Y N 7 AF C6 C Y N 8 AF C7 C Y N 9 AF C8 C Y N 10 AF C8A C Y N 11 AF C9 C N N 12 AF C9A C Y N 13 AF C1 C Y N 14 AF HN1 H N N 15 AF HN2 H N N 16 AF H3 H N N 17 AF H4 H N N 18 AF H5 H N N 19 AF H6 H N N 20 AF H7 H N N 21 AF H8 H N N 22 AF H91 H N N 23 AF H92 H N N 24 AF H1 H N N 25 DA OP3 O N N 26 DA P P N N 27 DA OP1 O N N 28 DA OP2 O N N 29 DA "O5'" O N N 30 DA "C5'" C N N 31 DA "C4'" C N R 32 DA "O4'" O N N 33 DA "C3'" C N S 34 DA "O3'" O N N 35 DA "C2'" C N N 36 DA "C1'" C N R 37 DA N9 N Y N 38 DA C8 C Y N 39 DA N7 N Y N 40 DA C5 C Y N 41 DA C6 C Y N 42 DA N6 N N N 43 DA N1 N Y N 44 DA C2 C Y N 45 DA N3 N Y N 46 DA C4 C Y N 47 DA HOP3 H N N 48 DA HOP2 H N N 49 DA "H5'" H N N 50 DA "H5''" H N N 51 DA "H4'" H N N 52 DA "H3'" H N N 53 DA "HO3'" H N N 54 DA "H2'" H N N 55 DA "H2''" H N N 56 DA "H1'" H N N 57 DA H8 H N N 58 DA H61 H N N 59 DA H62 H N N 60 DA H2 H N N 61 DC OP3 O N N 62 DC P P N N 63 DC OP1 O N N 64 DC OP2 O N N 65 DC "O5'" O N N 66 DC "C5'" C N N 67 DC "C4'" C N R 68 DC "O4'" O N N 69 DC "C3'" C N S 70 DC "O3'" O N N 71 DC "C2'" C N N 72 DC "C1'" C N R 73 DC N1 N N N 74 DC C2 C N N 75 DC O2 O N N 76 DC N3 N N N 77 DC C4 C N N 78 DC N4 N N N 79 DC C5 C N N 80 DC C6 C N N 81 DC HOP3 H N N 82 DC HOP2 H N N 83 DC "H5'" H N N 84 DC "H5''" H N N 85 DC "H4'" H N N 86 DC "H3'" H N N 87 DC "HO3'" H N N 88 DC "H2'" H N N 89 DC "H2''" H N N 90 DC "H1'" H N N 91 DC H41 H N N 92 DC H42 H N N 93 DC H5 H N N 94 DC H6 H N N 95 DG OP3 O N N 96 DG P P N N 97 DG OP1 O N N 98 DG OP2 O N N 99 DG "O5'" O N N 100 DG "C5'" C N N 101 DG "C4'" C N R 102 DG "O4'" O N N 103 DG "C3'" C N S 104 DG "O3'" O N N 105 DG "C2'" C N N 106 DG "C1'" C N R 107 DG N9 N Y N 108 DG C8 C Y N 109 DG N7 N Y N 110 DG C5 C Y N 111 DG C6 C N N 112 DG O6 O N N 113 DG N1 N N N 114 DG C2 C N N 115 DG N2 N N N 116 DG N3 N N N 117 DG C4 C Y N 118 DG HOP3 H N N 119 DG HOP2 H N N 120 DG "H5'" H N N 121 DG "H5''" H N N 122 DG "H4'" H N N 123 DG "H3'" H N N 124 DG "HO3'" H N N 125 DG "H2'" H N N 126 DG "H2''" H N N 127 DG "H1'" H N N 128 DG H8 H N N 129 DG H1 H N N 130 DG H21 H N N 131 DG H22 H N N 132 DT OP3 O N N 133 DT P P N N 134 DT OP1 O N N 135 DT OP2 O N N 136 DT "O5'" O N N 137 DT "C5'" C N N 138 DT "C4'" C N R 139 DT "O4'" O N N 140 DT "C3'" C N S 141 DT "O3'" O N N 142 DT "C2'" C N N 143 DT "C1'" C N R 144 DT N1 N N N 145 DT C2 C N N 146 DT O2 O N N 147 DT N3 N N N 148 DT C4 C N N 149 DT O4 O N N 150 DT C5 C N N 151 DT C7 C N N 152 DT C6 C N N 153 DT HOP3 H N N 154 DT HOP2 H N N 155 DT "H5'" H N N 156 DT "H5''" H N N 157 DT "H4'" H N N 158 DT "H3'" H N N 159 DT "HO3'" H N N 160 DT "H2'" H N N 161 DT "H2''" H N N 162 DT "H1'" H N N 163 DT H3 H N N 164 DT H71 H N N 165 DT H72 H N N 166 DT H73 H N N 167 DT H6 H N N 168 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AF N C2 sing N N 1 AF N HN1 sing N N 2 AF N HN2 sing N N 3 AF C2 C3 doub Y N 4 AF C2 C1 sing Y N 5 AF C3 C4 sing Y N 6 AF C3 H3 sing N N 7 AF C4 C4A doub Y N 8 AF C4 H4 sing N N 9 AF C4A C4B sing Y N 10 AF C4A C9A sing Y N 11 AF C4B C5 doub Y N 12 AF C4B C8A sing Y N 13 AF C5 C6 sing Y N 14 AF C5 H5 sing N N 15 AF C6 C7 doub Y N 16 AF C6 H6 sing N N 17 AF C7 C8 sing Y N 18 AF C7 H7 sing N N 19 AF C8 C8A doub Y N 20 AF C8 H8 sing N N 21 AF C8A C9 sing N N 22 AF C9 C9A sing N N 23 AF C9 H91 sing N N 24 AF C9 H92 sing N N 25 AF C9A C1 doub Y N 26 AF C1 H1 sing N N 27 DA OP3 P sing N N 28 DA OP3 HOP3 sing N N 29 DA P OP1 doub N N 30 DA P OP2 sing N N 31 DA P "O5'" sing N N 32 DA OP2 HOP2 sing N N 33 DA "O5'" "C5'" sing N N 34 DA "C5'" "C4'" sing N N 35 DA "C5'" "H5'" sing N N 36 DA "C5'" "H5''" sing N N 37 DA "C4'" "O4'" sing N N 38 DA "C4'" "C3'" sing N N 39 DA "C4'" "H4'" sing N N 40 DA "O4'" "C1'" sing N N 41 DA "C3'" "O3'" sing N N 42 DA "C3'" "C2'" sing N N 43 DA "C3'" "H3'" sing N N 44 DA "O3'" "HO3'" sing N N 45 DA "C2'" "C1'" sing N N 46 DA "C2'" "H2'" sing N N 47 DA "C2'" "H2''" sing N N 48 DA "C1'" N9 sing N N 49 DA "C1'" "H1'" sing N N 50 DA N9 C8 sing Y N 51 DA N9 C4 sing Y N 52 DA C8 N7 doub Y N 53 DA C8 H8 sing N N 54 DA N7 C5 sing Y N 55 DA C5 C6 sing Y N 56 DA C5 C4 doub Y N 57 DA C6 N6 sing N N 58 DA C6 N1 doub Y N 59 DA N6 H61 sing N N 60 DA N6 H62 sing N N 61 DA N1 C2 sing Y N 62 DA C2 N3 doub Y N 63 DA C2 H2 sing N N 64 DA N3 C4 sing Y N 65 DC OP3 P sing N N 66 DC OP3 HOP3 sing N N 67 DC P OP1 doub N N 68 DC P OP2 sing N N 69 DC P "O5'" sing N N 70 DC OP2 HOP2 sing N N 71 DC "O5'" "C5'" sing N N 72 DC "C5'" "C4'" sing N N 73 DC "C5'" "H5'" sing N N 74 DC "C5'" "H5''" sing N N 75 DC "C4'" "O4'" sing N N 76 DC "C4'" "C3'" sing N N 77 DC "C4'" "H4'" sing N N 78 DC "O4'" "C1'" sing N N 79 DC "C3'" "O3'" sing N N 80 DC "C3'" "C2'" sing N N 81 DC "C3'" "H3'" sing N N 82 DC "O3'" "HO3'" sing N N 83 DC "C2'" "C1'" sing N N 84 DC "C2'" "H2'" sing N N 85 DC "C2'" "H2''" sing N N 86 DC "C1'" N1 sing N N 87 DC "C1'" "H1'" sing N N 88 DC N1 C2 sing N N 89 DC N1 C6 sing N N 90 DC C2 O2 doub N N 91 DC C2 N3 sing N N 92 DC N3 C4 doub N N 93 DC C4 N4 sing N N 94 DC C4 C5 sing N N 95 DC N4 H41 sing N N 96 DC N4 H42 sing N N 97 DC C5 C6 doub N N 98 DC C5 H5 sing N N 99 DC C6 H6 sing N N 100 DG OP3 P sing N N 101 DG OP3 HOP3 sing N N 102 DG P OP1 doub N N 103 DG P OP2 sing N N 104 DG P "O5'" sing N N 105 DG OP2 HOP2 sing N N 106 DG "O5'" "C5'" sing N N 107 DG "C5'" "C4'" sing N N 108 DG "C5'" "H5'" sing N N 109 DG "C5'" "H5''" sing N N 110 DG "C4'" "O4'" sing N N 111 DG "C4'" "C3'" sing N N 112 DG "C4'" "H4'" sing N N 113 DG "O4'" "C1'" sing N N 114 DG "C3'" "O3'" sing N N 115 DG "C3'" "C2'" sing N N 116 DG "C3'" "H3'" sing N N 117 DG "O3'" "HO3'" sing N N 118 DG "C2'" "C1'" sing N N 119 DG "C2'" "H2'" sing N N 120 DG "C2'" "H2''" sing N N 121 DG "C1'" N9 sing N N 122 DG "C1'" "H1'" sing N N 123 DG N9 C8 sing Y N 124 DG N9 C4 sing Y N 125 DG C8 N7 doub Y N 126 DG C8 H8 sing N N 127 DG N7 C5 sing Y N 128 DG C5 C6 sing N N 129 DG C5 C4 doub Y N 130 DG C6 O6 doub N N 131 DG C6 N1 sing N N 132 DG N1 C2 sing N N 133 DG N1 H1 sing N N 134 DG C2 N2 sing N N 135 DG C2 N3 doub N N 136 DG N2 H21 sing N N 137 DG N2 H22 sing N N 138 DG N3 C4 sing N N 139 DT OP3 P sing N N 140 DT OP3 HOP3 sing N N 141 DT P OP1 doub N N 142 DT P OP2 sing N N 143 DT P "O5'" sing N N 144 DT OP2 HOP2 sing N N 145 DT "O5'" "C5'" sing N N 146 DT "C5'" "C4'" sing N N 147 DT "C5'" "H5'" sing N N 148 DT "C5'" "H5''" sing N N 149 DT "C4'" "O4'" sing N N 150 DT "C4'" "C3'" sing N N 151 DT "C4'" "H4'" sing N N 152 DT "O4'" "C1'" sing N N 153 DT "C3'" "O3'" sing N N 154 DT "C3'" "C2'" sing N N 155 DT "C3'" "H3'" sing N N 156 DT "O3'" "HO3'" sing N N 157 DT "C2'" "C1'" sing N N 158 DT "C2'" "H2'" sing N N 159 DT "C2'" "H2''" sing N N 160 DT "C1'" N1 sing N N 161 DT "C1'" "H1'" sing N N 162 DT N1 C2 sing N N 163 DT N1 C6 sing N N 164 DT C2 O2 doub N N 165 DT C2 N3 sing N N 166 DT N3 C4 sing N N 167 DT N3 H3 sing N N 168 DT C4 O4 doub N N 169 DT C4 C5 sing N N 170 DT C5 C7 sing N N 171 DT C5 C6 doub N N 172 DT C7 H71 sing N N 173 DT C7 H72 sing N N 174 DT C7 H73 sing N N 175 DT C6 H6 sing N N 176 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1AX7 'double helix' 1AX7 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 5 1_555 B DG 9 1_555 1.475 -0.465 -0.419 -6.034 -11.288 11.090 1 A_DC5:DG22_B A 5 ? B 22 ? 19 1 1 A DT 6 1_555 B DA 8 1_555 -0.521 -0.130 -0.166 7.724 -9.694 -3.534 2 A_DT6:DA21_B A 6 ? B 21 ? 20 1 1 A DA 7 1_555 B DT 7 1_555 0.470 -0.105 0.557 22.096 -14.887 0.664 3 A_DA7:DT20_B A 7 ? B 20 ? 20 1 1 A DC 8 1_555 B DG 6 1_555 0.862 -0.192 -0.577 20.164 -16.795 1.712 4 A_DC8:DG19_B A 8 ? B 19 ? 19 1 1 A DC 9 1_555 B DG 5 1_555 0.863 -0.358 0.287 -14.842 -6.351 0.945 5 A_DC9:DG18_B A 9 ? B 18 ? 19 1 1 A DA 10 1_555 B DT 4 1_555 0.488 -0.192 0.298 4.896 -6.549 1.545 6 A_DA10:DT17_B A 10 ? B 17 ? 20 1 1 A DT 11 1_555 B DA 3 1_555 0.376 -0.175 0.192 13.716 -6.245 3.980 7 A_DT11:DA16_B A 11 ? B 16 ? 20 1 1 A DC 12 1_555 B DG 2 1_555 1.260 -0.485 0.002 21.830 -10.623 -1.520 8 A_DC12:DG15_B A 12 ? B 15 ? 19 1 1 A DC 13 1_555 B DG 1 1_555 0.766 -0.280 0.291 3.612 5.562 0.512 9 A_DC13:DG14_B A 13 ? B 14 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 5 1_555 B DG 9 1_555 A DT 6 1_555 B DA 8 1_555 -0.818 0.054 3.227 -1.092 1.460 19.099 -0.575 1.906 3.263 4.388 3.281 19.185 1 AA_DC5DT6:DA21DG22_BB A 5 ? B 22 ? A 6 ? B 21 ? 1 A DT 6 1_555 B DA 8 1_555 A DA 7 1_555 B DT 7 1_555 -0.038 -0.354 3.013 -7.103 11.202 38.628 -1.635 -0.660 2.774 16.358 10.372 40.759 2 AA_DT6DA7:DT20DA21_BB A 6 ? B 21 ? A 7 ? B 20 ? 1 A DA 7 1_555 B DT 7 1_555 A DC 8 1_555 B DG 6 1_555 0.475 -0.255 3.177 8.524 -0.411 44.879 -0.293 0.123 3.213 -0.533 -11.047 45.642 3 AA_DA7DC8:DG19DT20_BB A 7 ? B 20 ? A 8 ? B 19 ? 1 A DC 8 1_555 B DG 6 1_555 A DC 9 1_555 B DG 5 1_555 0.757 -1.668 4.379 -0.562 -5.216 36.223 -1.671 -1.312 4.556 -8.335 0.898 36.589 4 AA_DC8DC9:DG18DG19_BB A 8 ? B 19 ? A 9 ? B 18 ? 1 A DC 9 1_555 B DG 5 1_555 A DA 10 1_555 B DT 4 1_555 -0.689 -0.788 2.596 -0.343 4.092 28.826 -2.265 1.313 2.470 8.168 0.684 29.111 5 AA_DC9DA10:DT17DG18_BB A 9 ? B 18 ? A 10 ? B 17 ? 1 A DA 10 1_555 B DT 4 1_555 A DT 11 1_555 B DA 3 1_555 -0.500 -0.603 2.918 -1.293 1.632 30.665 -1.422 0.718 2.901 3.082 2.441 30.734 6 AA_DA10DT11:DA16DT17_BB A 10 ? B 17 ? A 11 ? B 16 ? 1 A DT 11 1_555 B DA 3 1_555 A DC 12 1_555 B DG 2 1_555 0.123 -0.214 2.983 2.973 4.125 43.061 -0.656 0.097 2.953 5.597 -4.033 43.346 7 AA_DT11DC12:DG15DA16_BB A 11 ? B 16 ? A 12 ? B 15 ? 1 A DC 12 1_555 B DG 2 1_555 A DC 13 1_555 B DG 1 1_555 0.125 -0.367 3.835 -0.540 6.682 42.297 -1.280 -0.234 3.736 9.190 0.743 42.801 8 AA_DC12DC13:DG14DG15_BB A 12 ? B 15 ? A 13 ? B 14 ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength 1 'VARIAN UNITY PLUS' Varian 500 2 'VARIAN UNITY PLUS' Varian 600 # _atom_sites.entry_id 1AX7 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_