HEADER GENE REGULATION/DNA 27-MAY-98 1BF5 TITLE TYROSINE PHOSPHORYLATED STAT-1/DNA COMPLEX CAVEAT 1BF5 PHE A 628 HAS WRONG CHIRALITY AT ATOM CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(*AP*CP*AP*GP*TP*TP*TP*CP*CP*CP*GP*TP*AP*AP*AP*TP*G P*C)-3'); COMPND 4 CHAIN: B; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'- COMPND 8 D(*TP*GP*CP*AP*TP*TP*TP*AP*CP*GP*GP*GP*AP*AP*AP*CP*T P*G)-3'); COMPND 9 CHAIN: C; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 1- COMPND 13 ALPHA/BETA; COMPND 14 CHAIN: A; COMPND 15 FRAGMENT: RESIDUES 136-710; COMPND 16 SYNONYM: TRANSCRIPTION FACTOR ISGF-3 COMPONENTS P91/P84, STAT-1; COMPND 17 ENGINEERED: YES; COMPND 18 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 MOL_ID: 2; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX (SH2 DOMAIN-DNA), SH2 DOMAIN, TRANSCRIPTION FACTOR, GENE KEYWDS 2 REGULATION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.KURIYAN,Y.ZHAO,X.CHEN,U.VINKEMEIER,D.JERUZALMI,J.E.DARNELL JR. REVDAT 6 20-NOV-24 1BF5 1 REMARK REVDAT 5 21-DEC-22 1BF5 1 SEQADV LINK REVDAT 4 07-MAR-18 1BF5 1 REMARK REVDAT 3 19-JUL-17 1BF5 1 CAVEAT REMARK REVDAT 2 24-FEB-09 1BF5 1 VERSN REVDAT 1 12-AUG-98 1BF5 0 JRNL AUTH X.CHEN,U.VINKEMEIER,Y.ZHAO,D.JERUZALMI,J.E.DARNELL JR., JRNL AUTH 2 J.KURIYAN JRNL TITL CRYSTAL STRUCTURE OF A TYROSINE PHOSPHORYLATED STAT-1 DIMER JRNL TITL 2 BOUND TO DNA. JRNL REF CELL(CAMBRIDGE,MASS.) V. 93 827 1998 JRNL REFN ISSN 0092-8674 JRNL PMID 9630226 JRNL DOI 10.1016/S0092-8674(00)81443-9 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 3.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.8 REMARK 3 NUMBER OF REFLECTIONS : 20526 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2041 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4385 REMARK 3 NUCLEIC ACID ATOMS : 732 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.46200 REMARK 3 B22 (A**2) : 6.88200 REMARK 3 B33 (A**2) : -10.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.018 REMARK 3 BOND ANGLES (DEGREES) : 2.290 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1BF5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000171681. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JAN-98 REMARK 200 TEMPERATURE (KELVIN) : 100.00 REMARK 200 PH : 5.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23301 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.8 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : 0.19800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 5.00, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277.00K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.55000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 90.55000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.30000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.10000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.30000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.10000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 90.55000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.30000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 74.10000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 90.55000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.30000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 74.10000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: A CRYSTALLOGRAPHIC 2-FOLD AXIS PASSES THROUGH THE CENTER REMARK 300 OF THE DNA DUPLEX. THE ASYMMETRIC UNIT CONTAINS HALF OF REMARK 300 THE DUPLEX, AND THUS THE OPERATION OF THE TWO-FOLD AXIS REMARK 300 RESULTS IN A NET 1.0 OCCUPANCY WITHIN THE ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, A REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 148.20000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 181.10000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 183 REMARK 465 THR A 184 REMARK 465 ASN A 185 REMARK 465 GLY A 186 REMARK 465 VAL A 187 REMARK 465 ALA A 188 REMARK 465 LYS A 189 REMARK 465 SER A 190 REMARK 465 ASP A 191 REMARK 465 GLN A 192 REMARK 465 LYS A 193 REMARK 465 GLN A 194 REMARK 465 GLU A 195 REMARK 465 GLN A 196 REMARK 465 PRO A 684 REMARK 465 LYS A 685 REMARK 465 GLU A 686 REMARK 465 ALA A 687 REMARK 465 PRO A 688 REMARK 465 GLU A 689 REMARK 465 PRO A 690 REMARK 465 MET A 691 REMARK 465 GLU A 692 REMARK 465 LEU A 693 REMARK 465 ASP A 694 REMARK 465 GLY A 695 REMARK 465 PRO A 696 REMARK 465 LYS A 697 REMARK 465 GLY A 698 REMARK 465 THR A 699 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 197 CG CD1 CD2 REMARK 470 LEU A 198 CG CD1 CD2 REMARK 470 LEU A 199 CG CD1 CD2 REMARK 470 THR A 396 OG1 CG2 REMARK 470 ASN A 397 CG OD1 ND2 REMARK 470 SER A 399 OG REMARK 470 THR A 417 OG1 CG2 REMARK 470 ARG A 418 CG CD NE CZ NH1 NH2 REMARK 470 THR A 419 OG1 CG2 REMARK 470 ASN A 420 CG OD1 ND2 REMARK 470 ARG A 608 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 625 CG CD OE1 OE2 REMARK 470 VAL A 653 CG1 CG2 REMARK 470 MET A 654 CG SD CE REMARK 470 GLU A 657 CG CD OE1 OE2 REMARK 470 ASN A 658 CG OD1 ND2 REMARK 470 ILE A 659 CG1 CG2 CD1 REMARK 470 PRO A 660 CG CD REMARK 470 GLU A 661 CG CD OE1 OE2 REMARK 470 ASN A 662 CG OD1 ND2 REMARK 470 TYR A 666 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 682 OG REMARK 470 ARG A 683 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB SER A 620 O GLY A 624 1.76 REMARK 500 CG2 VAL A 617 CD1 PHE A 628 1.89 REMARK 500 O2 DC B 1018 OE2 GLU A 421 2.10 REMARK 500 OE2 GLU A 587 OG1 THR A 615 2.10 REMARK 500 CG2 VAL A 617 CE1 PHE A 628 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 165 OD2 ASP A 165 3655 1.82 REMARK 500 OE1 GLN A 438 ND2 ASN A 670 1455 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG C2010 O3' DG C2011 P -0.946 REMARK 500 GLY A 422 N GLY A 422 CA 0.223 REMARK 500 GLU A 480 N GLU A 480 CA 0.427 REMARK 500 CYS A 543 CB CYS A 543 SG 0.258 REMARK 500 SER A 607 C ARG A 608 N 0.189 REMARK 500 ARG A 608 C GLU A 609 N -0.215 REMARK 500 GLY A 623 C GLY A 624 N -0.432 REMARK 500 HIS A 629 N HIS A 629 CA 0.145 REMARK 500 TYR A 666 CA TYR A 666 CB 0.192 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C2010 C3' - O3' - P ANGL. DEV. = 13.4 DEGREES REMARK 500 DG C2011 O3' - P - OP2 ANGL. DEV. = -14.4 DEGREES REMARK 500 DG C2011 O3' - P - OP1 ANGL. DEV. = 15.4 DEGREES REMARK 500 PRO A 332 C - N - CA ANGL. DEV. = 10.3 DEGREES REMARK 500 LEU A 407 N - CA - C ANGL. DEV. = -25.5 DEGREES REMARK 500 GLY A 422 C - N - CA ANGL. DEV. = -17.5 DEGREES REMARK 500 GLY A 422 N - CA - C ANGL. DEV. = -20.9 DEGREES REMARK 500 GLU A 480 N - CA - C ANGL. DEV. = -34.8 DEGREES REMARK 500 ARG A 482 N - CA - C ANGL. DEV. = 17.8 DEGREES REMARK 500 LYS A 550 N - CA - C ANGL. DEV. = 16.7 DEGREES REMARK 500 LEU A 562 CB - CG - CD1 ANGL. DEV. = -13.9 DEGREES REMARK 500 LYS A 592 N - CA - C ANGL. DEV. = -17.1 DEGREES REMARK 500 GLN A 595 N - CA - C ANGL. DEV. = -28.6 DEGREES REMARK 500 PRO A 596 C - N - CA ANGL. DEV. = 10.3 DEGREES REMARK 500 GLY A 597 N - CA - C ANGL. DEV. = -17.3 DEGREES REMARK 500 PHE A 628 N - CA - CB ANGL. DEV. = 25.4 DEGREES REMARK 500 HIS A 629 N - CA - C ANGL. DEV. = 30.3 DEGREES REMARK 500 PRO A 660 N - CA - CB ANGL. DEV. = 7.5 DEGREES REMARK 500 PRO A 663 C - N - CA ANGL. DEV. = 25.2 DEGREES REMARK 500 PRO A 663 C - N - CD ANGL. DEV. = -20.3 DEGREES REMARK 500 LYS A 665 N - CA - C ANGL. DEV. = 20.6 DEGREES REMARK 500 TYR A 666 CA - C - N ANGL. DEV. = -14.3 DEGREES REMARK 500 TYR A 668 N - CA - C ANGL. DEV. = -16.7 DEGREES REMARK 500 PRO A 669 C - N - CA ANGL. DEV. = -16.6 DEGREES REMARK 500 PRO A 669 C - N - CD ANGL. DEV. = 19.6 DEGREES REMARK 500 ILE A 671 N - CA - C ANGL. DEV. = -26.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 180 37.64 -83.67 REMARK 500 GLU A 181 -69.83 -144.68 REMARK 500 LYS A 201 -71.34 -42.08 REMARK 500 MET A 202 -99.01 -36.99 REMARK 500 TYR A 203 -11.30 -42.42 REMARK 500 LEU A 231 -72.37 -60.72 REMARK 500 TYR A 289 153.72 174.86 REMARK 500 GLU A 290 -57.40 -21.35 REMARK 500 LYS A 298 -71.41 -36.94 REMARK 500 GLN A 322 157.34 -49.06 REMARK 500 CYS A 324 152.88 179.74 REMARK 500 LYS A 350 86.14 46.46 REMARK 500 GLU A 353 28.80 -68.58 REMARK 500 LEU A 383 -57.21 -141.09 REMARK 500 ALA A 402 116.84 -169.62 REMARK 500 GLN A 412 60.96 -102.05 REMARK 500 THR A 417 62.82 -119.28 REMARK 500 LEU A 424 -31.98 -36.71 REMARK 500 THR A 427 8.90 -59.13 REMARK 500 VAL A 461 -7.46 -55.95 REMARK 500 ALA A 479 -11.76 -147.23 REMARK 500 THR A 489 70.19 -156.28 REMARK 500 LYS A 544 -51.67 -129.55 REMARK 500 ASN A 548 -41.73 -15.24 REMARK 500 ASP A 549 10.40 -170.16 REMARK 500 LYS A 550 -155.13 -85.64 REMARK 500 HIS A 568 -2.90 -165.23 REMARK 500 ASP A 575 45.43 -78.05 REMARK 500 GLU A 585 -71.56 -63.35 REMARK 500 GLU A 587 -74.16 -55.97 REMARK 500 GLN A 594 46.80 21.01 REMARK 500 PRO A 596 -9.16 -30.92 REMARK 500 LEU A 600 104.92 -162.84 REMARK 500 GLU A 618 -154.11 -117.75 REMARK 500 ASN A 622 30.46 -151.83 REMARK 500 ASP A 627 14.88 -41.76 REMARK 500 HIS A 629 93.27 -11.95 REMARK 500 LYS A 637 -87.54 -45.39 REMARK 500 LYS A 652 -35.94 -12.46 REMARK 500 VAL A 653 71.23 39.66 REMARK 500 MET A 654 83.99 55.15 REMARK 500 GLU A 657 -140.11 -171.08 REMARK 500 ASN A 658 40.18 168.53 REMARK 500 ILE A 659 -69.20 177.04 REMARK 500 ASN A 662 -138.26 -144.83 REMARK 500 PRO A 663 85.13 -56.23 REMARK 500 LYS A 665 29.88 99.69 REMARK 500 TYR A 666 111.29 176.28 REMARK 500 TYR A 668 -137.52 -141.36 REMARK 500 LYS A 673 -73.28 -18.02 REMARK 500 REMARK 500 THIS ENTRY HAS 52 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 421 GLY A 422 -147.66 REMARK 500 ALA A 479 GLU A 480 -116.69 REMARK 500 PHE A 628 HIS A 629 135.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DT B1007 0.08 SIDE CHAIN REMARK 500 DC B1009 0.07 SIDE CHAIN REMARK 500 DT C2007 0.08 SIDE CHAIN REMARK 500 DC C2016 0.06 SIDE CHAIN REMARK 500 TYR A 668 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER A 607 -17.17 REMARK 500 ARG A 608 -13.97 REMARK 500 PHE A 628 12.41 REMARK 500 REMARK 500 REMARK: NULL DBREF 1BF5 A 136 710 UNP P42224 STAT1_HUMAN 136 683 DBREF 1BF5 B 1001 1018 PDB 1BF5 1BF5 1001 1018 DBREF 1BF5 C 2001 2018 PDB 1BF5 1BF5 2001 2018 SEQADV 1BF5 PTR A 701 UNP P42224 TYR 701 MODIFIED RESIDUE SEQRES 1 B 18 DA DC DA DG DT DT DT DC DC DC DG DT DA SEQRES 2 B 18 DA DA DT DG DC SEQRES 1 C 18 DT DG DC DA DT DT DT DA DC DG DG DG DA SEQRES 2 C 18 DA DA DC DT DG SEQRES 1 A 575 LEU ASP LYS GLN LYS GLU LEU ASP SER LYS VAL ARG ASN SEQRES 2 A 575 VAL LYS ASP LYS VAL MET CYS ILE GLU HIS GLU ILE LYS SEQRES 3 A 575 SER LEU GLU ASP LEU GLN ASP GLU TYR ASP PHE LYS CYS SEQRES 4 A 575 LYS THR LEU GLN ASN ARG GLU HIS GLU THR ASN GLY VAL SEQRES 5 A 575 ALA LYS SER ASP GLN LYS GLN GLU GLN LEU LEU LEU LYS SEQRES 6 A 575 LYS MET TYR LEU MET LEU ASP ASN LYS ARG LYS GLU VAL SEQRES 7 A 575 VAL HIS LYS ILE ILE GLU LEU LEU ASN VAL THR GLU LEU SEQRES 8 A 575 THR GLN ASN ALA LEU ILE ASN ASP GLU LEU VAL GLU TRP SEQRES 9 A 575 LYS ARG ARG GLN GLN SER ALA CYS ILE GLY GLY PRO PRO SEQRES 10 A 575 ASN ALA CYS LEU ASP GLN LEU GLN ASN TRP PHE THR ILE SEQRES 11 A 575 VAL ALA GLU SER LEU GLN GLN VAL ARG GLN GLN LEU LYS SEQRES 12 A 575 LYS LEU GLU GLU LEU GLU GLN LYS TYR THR TYR GLU HIS SEQRES 13 A 575 ASP PRO ILE THR LYS ASN LYS GLN VAL LEU TRP ASP ARG SEQRES 14 A 575 THR PHE SER LEU PHE GLN GLN LEU ILE GLN SER SER PHE SEQRES 15 A 575 VAL VAL GLU ARG GLN PRO CYS MET PRO THR HIS PRO GLN SEQRES 16 A 575 ARG PRO LEU VAL LEU LYS THR GLY VAL GLN PHE THR VAL SEQRES 17 A 575 LYS LEU ARG LEU LEU VAL LYS LEU GLN GLU LEU ASN TYR SEQRES 18 A 575 ASN LEU LYS VAL LYS VAL LEU PHE ASP LYS ASP VAL ASN SEQRES 19 A 575 GLU ARG ASN THR VAL LYS GLY PHE ARG LYS PHE ASN ILE SEQRES 20 A 575 LEU GLY THR HIS THR LYS VAL MET ASN MET GLU GLU SER SEQRES 21 A 575 THR ASN GLY SER LEU ALA ALA GLU PHE ARG HIS LEU GLN SEQRES 22 A 575 LEU LYS GLU GLN LYS ASN ALA GLY THR ARG THR ASN GLU SEQRES 23 A 575 GLY PRO LEU ILE VAL THR GLU GLU LEU HIS SER LEU SER SEQRES 24 A 575 PHE GLU THR GLN LEU CYS GLN PRO GLY LEU VAL ILE ASP SEQRES 25 A 575 LEU GLU THR THR SER LEU PRO VAL VAL VAL ILE SER ASN SEQRES 26 A 575 VAL SER GLN LEU PRO SER GLY TRP ALA SER ILE LEU TRP SEQRES 27 A 575 TYR ASN MET LEU VAL ALA GLU PRO ARG ASN LEU SER PHE SEQRES 28 A 575 PHE LEU THR PRO PRO CYS ALA ARG TRP ALA GLN LEU SER SEQRES 29 A 575 GLU VAL LEU SER TRP GLN PHE SER SER VAL THR LYS ARG SEQRES 30 A 575 GLY LEU ASN VAL ASP GLN LEU ASN MET LEU GLY GLU LYS SEQRES 31 A 575 LEU LEU GLY PRO ASN ALA SER PRO ASP GLY LEU ILE PRO SEQRES 32 A 575 TRP THR ARG PHE CYS LYS GLU ASN ILE ASN ASP LYS ASN SEQRES 33 A 575 PHE PRO PHE TRP LEU TRP ILE GLU SER ILE LEU GLU LEU SEQRES 34 A 575 ILE LYS LYS HIS LEU LEU PRO LEU TRP ASN ASP GLY CYS SEQRES 35 A 575 ILE MET GLY PHE ILE SER LYS GLU ARG GLU ARG ALA LEU SEQRES 36 A 575 LEU LYS ASP GLN GLN PRO GLY THR PHE LEU LEU ARG PHE SEQRES 37 A 575 SER GLU SER SER ARG GLU GLY ALA ILE THR PHE THR TRP SEQRES 38 A 575 VAL GLU ARG SER GLN ASN GLY GLY GLU PRO ASP PHE HIS SEQRES 39 A 575 ALA VAL GLU PRO TYR THR LYS LYS GLU LEU SER ALA VAL SEQRES 40 A 575 THR PHE PRO ASP ILE ILE ARG ASN TYR LYS VAL MET ALA SEQRES 41 A 575 ALA GLU ASN ILE PRO GLU ASN PRO LEU LYS TYR LEU TYR SEQRES 42 A 575 PRO ASN ILE ASP LYS ASP HIS ALA PHE GLY LYS TYR TYR SEQRES 43 A 575 SER ARG PRO LYS GLU ALA PRO GLU PRO MET GLU LEU ASP SEQRES 44 A 575 GLY PRO LYS GLY THR GLY PTR ILE LYS THR GLU LEU ILE SEQRES 45 A 575 SER VAL SER MODRES 1BF5 PTR A 701 TYR O-PHOSPHOTYROSINE HET PTR A 701 16 HETNAM PTR O-PHOSPHOTYROSINE HETSYN PTR PHOSPHONOTYROSINE FORMUL 3 PTR C9 H12 N O6 P HELIX 1 1 ASP A 137 ASN A 179 1 43 HELIX 2 2 LEU A 198 CYS A 247 1 50 HELIX 3 3 ASP A 257 LYS A 286 1 30 HELIX 4 4 PRO A 293 SER A 316 1 24 HELIX 5 5 GLN A 352 LEU A 354 5 3 HELIX 6 6 ASN A 369 THR A 373 5 5 HELIX 7 7 VAL A 461 LEU A 477 5 17 HELIX 8 8 PHE A 486 THR A 489 5 4 HELIX 9 9 TRP A 495 VAL A 509 1 15 HELIX 10 10 VAL A 516 LEU A 526 1 11 HELIX 11 11 TRP A 539 CYS A 543 1 5 HELIX 12 12 PHE A 554 LYS A 566 1 13 HELIX 13 13 LEU A 570 ASN A 574 1 5 HELIX 14 14 LYS A 584 LEU A 591 1 8 HELIX 15 15 LYS A 636 SER A 640 1 5 HELIX 16 16 PHE A 644 ARG A 649 1 6 HELIX 17 17 LYS A 673 PHE A 677 1 5 SHEET 1 A 2 VAL A 334 LYS A 336 0 SHEET 2 A 2 VAL A 456 ILE A 458 1 N VAL A 456 O LEU A 335 SHEET 1 B 2 VAL A 343 LEU A 347 0 SHEET 2 B 2 LEU A 400 PHE A 404 -1 N PHE A 404 O VAL A 343 SHEET 1 C 4 THR A 387 VAL A 389 0 SHEET 2 C 4 LYS A 359 PHE A 364 -1 N VAL A 360 O LYS A 388 SHEET 3 C 4 LEU A 433 GLN A 441 -1 N GLU A 436 O LYS A 361 SHEET 4 C 4 LEU A 444 THR A 451 -1 N THR A 450 O PHE A 435 SHEET 1 D 2 LEU A 601 PHE A 603 0 SHEET 2 D 2 ILE A 612 PHE A 614 -1 N THR A 613 O ARG A 602 LINK C GLY A 700 N PTR A 701 1555 1555 1.32 LINK C PTR A 701 N ILE A 702 1555 1555 1.32 CISPEP 1 ASN A 662 PRO A 663 0 -4.37 CRYST1 76.600 148.200 181.100 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013055 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006748 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005522 0.00000