data_1BJ3 # _entry.id 1BJ3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1BJ3 RCSB RCSB008100 WWPDB D_1000008100 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1BJ3 _pdbx_database_status.recvd_initial_deposition_date 1998-07-02 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mizuno, H.' 1 'Fujimoto, Z.' 2 'Koizumi, M.' 3 'Kano, H.' 4 'Atoda, H.' 5 'Morita, T.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Crystal structure of coagulation factor IX-binding protein from habu snake venom at 2.6 A: implication of central loop swapping based on deletion in the linker region. ; J.Mol.Biol. 289 103 112 1999 JMOBAK UK 0022-2836 0070 ? 10339409 10.1006/jmbi.1999.2756 1 'Structure of Coagulation Factors Ix/X-Binding Protein, a Heterodimer of C-Type Lectin Domains' Nat.Struct.Biol. 4 438 ? 1997 NSBIEW US 1072-8368 2024 ? ? ? 2 'Blood Coagulation Factor Ix-Binding Protein from the Venom of Trimeresurus Flavoviridis: Purification and Characterization' 'J.Biochem.(Tokyo)' 118 965 ? 1995 JOBIAO JA 0021-924X 0418 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Mizuno, H.' 1 primary 'Fujimoto, Z.' 2 primary 'Koizumi, M.' 3 primary 'Kano, H.' 4 primary 'Atoda, H.' 5 primary 'Morita, T.' 6 1 'Mizuno, H.' 7 1 'Fujimoto, Z.' 8 1 'Koizumi, M.' 9 1 'Kano, H.' 10 1 'Atoda, H.' 11 1 'Morita, T.' 12 2 'Atoda, H.' 13 2 'Ishikawa, M.' 14 2 'Yoshihara, E.' 15 2 'Sekiya, F.' 16 2 'Morita, T.' 17 # _cell.entry_id 1BJ3 _cell.length_a 58.569 _cell.length_b 56.794 _cell.length_c 39.616 _cell.angle_alpha 90.00 _cell.angle_beta 95.80 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BJ3 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'PROTEIN (COAGULATION FACTOR IX-BINDING PROTEIN A)' 14655.184 1 ? ? 'C-TYPE LECTIN CRD DOMAIN' ;DISULPHIDE DIMER BETWEEN A CYS79 AND B CYS75, PROTEIN COMPOSED OF HOMOLOGOUS SUBUNITS TO THE CARBOHYDRATE RECOGNITION DOMAIN OF C-TYPE LECTIN ; 2 polymer nat 'PROTEIN (COAGULATION FACTOR IX-BINDING PROTEIN B)' 14455.071 1 ? ? 'C-TYPE LECTIN CRD DOMAIN' ;DISULPHIDE DIMER BETWEEN A CYS79 AND B CYS75, PROTEIN COMPOSED OF HOMOLOGOUS SUBUNITS TO THE CARBOHYDRATE RECOGNITION DOMAIN OF C-TYPE LECTIN ; 3 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 4 water nat water 18.015 83 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 IX-BP 2 IX-BP # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DCPSGWSSYEGHCYKPFKLYKTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQNTKSYVWIGLRVQGKEKQCS SEWSDGSSVSYENWIEAESKTCLGLEKETGFRKWVNIYCGQQNPFVCEA ; ;DCPSGWSSYEGHCYKPFKLYKTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQNTKSYVWIGLRVQGKEKQCS SEWSDGSSVSYENWIEAESKTCLGLEKETGFRKWVNIYCGQQNPFVCEA ; A ? 2 'polypeptide(L)' no no ;DCPSDWSSYEGHCYKPFSEPKNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTFGHSIFWMGLSNVWNQCNWQWS NAAMLRYKAWAEESYCVYFKSTNNKWRSRACRMMAQFVCEFQA ; ;DCPSDWSSYEGHCYKPFSEPKNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTFGHSIFWMGLSNVWNQCNWQWS NAAMLRYKAWAEESYCVYFKSTNNKWRSRACRMMAQFVCEFQA ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 CYS n 1 3 PRO n 1 4 SER n 1 5 GLY n 1 6 TRP n 1 7 SER n 1 8 SER n 1 9 TYR n 1 10 GLU n 1 11 GLY n 1 12 HIS n 1 13 CYS n 1 14 TYR n 1 15 LYS n 1 16 PRO n 1 17 PHE n 1 18 LYS n 1 19 LEU n 1 20 TYR n 1 21 LYS n 1 22 THR n 1 23 TRP n 1 24 ASP n 1 25 ASP n 1 26 ALA n 1 27 GLU n 1 28 ARG n 1 29 PHE n 1 30 CYS n 1 31 THR n 1 32 GLU n 1 33 GLN n 1 34 ALA n 1 35 LYS n 1 36 GLY n 1 37 GLY n 1 38 HIS n 1 39 LEU n 1 40 VAL n 1 41 SER n 1 42 ILE n 1 43 GLU n 1 44 SER n 1 45 ALA n 1 46 GLY n 1 47 GLU n 1 48 ALA n 1 49 ASP n 1 50 PHE n 1 51 VAL n 1 52 ALA n 1 53 GLN n 1 54 LEU n 1 55 VAL n 1 56 THR n 1 57 GLU n 1 58 ASN n 1 59 ILE n 1 60 GLN n 1 61 ASN n 1 62 THR n 1 63 LYS n 1 64 SER n 1 65 TYR n 1 66 VAL n 1 67 TRP n 1 68 ILE n 1 69 GLY n 1 70 LEU n 1 71 ARG n 1 72 VAL n 1 73 GLN n 1 74 GLY n 1 75 LYS n 1 76 GLU n 1 77 LYS n 1 78 GLN n 1 79 CYS n 1 80 SER n 1 81 SER n 1 82 GLU n 1 83 TRP n 1 84 SER n 1 85 ASP n 1 86 GLY n 1 87 SER n 1 88 SER n 1 89 VAL n 1 90 SER n 1 91 TYR n 1 92 GLU n 1 93 ASN n 1 94 TRP n 1 95 ILE n 1 96 GLU n 1 97 ALA n 1 98 GLU n 1 99 SER n 1 100 LYS n 1 101 THR n 1 102 CYS n 1 103 LEU n 1 104 GLY n 1 105 LEU n 1 106 GLU n 1 107 LYS n 1 108 GLU n 1 109 THR n 1 110 GLY n 1 111 PHE n 1 112 ARG n 1 113 LYS n 1 114 TRP n 1 115 VAL n 1 116 ASN n 1 117 ILE n 1 118 TYR n 1 119 CYS n 1 120 GLY n 1 121 GLN n 1 122 GLN n 1 123 ASN n 1 124 PRO n 1 125 PHE n 1 126 VAL n 1 127 CYS n 1 128 GLU n 1 129 ALA n 2 1 ASP n 2 2 CYS n 2 3 PRO n 2 4 SER n 2 5 ASP n 2 6 TRP n 2 7 SER n 2 8 SER n 2 9 TYR n 2 10 GLU n 2 11 GLY n 2 12 HIS n 2 13 CYS n 2 14 TYR n 2 15 LYS n 2 16 PRO n 2 17 PHE n 2 18 SER n 2 19 GLU n 2 20 PRO n 2 21 LYS n 2 22 ASN n 2 23 TRP n 2 24 ALA n 2 25 ASP n 2 26 ALA n 2 27 GLU n 2 28 ASN n 2 29 PHE n 2 30 CYS n 2 31 THR n 2 32 GLN n 2 33 GLN n 2 34 HIS n 2 35 ALA n 2 36 GLY n 2 37 GLY n 2 38 HIS n 2 39 LEU n 2 40 VAL n 2 41 SER n 2 42 PHE n 2 43 GLN n 2 44 SER n 2 45 SER n 2 46 GLU n 2 47 GLU n 2 48 ALA n 2 49 ASP n 2 50 PHE n 2 51 VAL n 2 52 VAL n 2 53 LYS n 2 54 LEU n 2 55 ALA n 2 56 PHE n 2 57 GLN n 2 58 THR n 2 59 PHE n 2 60 GLY n 2 61 HIS n 2 62 SER n 2 63 ILE n 2 64 PHE n 2 65 TRP n 2 66 MET n 2 67 GLY n 2 68 LEU n 2 69 SER n 2 70 ASN n 2 71 VAL n 2 72 TRP n 2 73 ASN n 2 74 GLN n 2 75 CYS n 2 76 ASN n 2 77 TRP n 2 78 GLN n 2 79 TRP n 2 80 SER n 2 81 ASN n 2 82 ALA n 2 83 ALA n 2 84 MET n 2 85 LEU n 2 86 ARG n 2 87 TYR n 2 88 LYS n 2 89 ALA n 2 90 TRP n 2 91 ALA n 2 92 GLU n 2 93 GLU n 2 94 SER n 2 95 TYR n 2 96 CYS n 2 97 VAL n 2 98 TYR n 2 99 PHE n 2 100 LYS n 2 101 SER n 2 102 THR n 2 103 ASN n 2 104 ASN n 2 105 LYS n 2 106 TRP n 2 107 ARG n 2 108 SER n 2 109 ARG n 2 110 ALA n 2 111 CYS n 2 112 ARG n 2 113 MET n 2 114 MET n 2 115 ALA n 2 116 GLN n 2 117 PHE n 2 118 VAL n 2 119 CYS n 2 120 GLU n 2 121 PHE n 2 122 GLN n 2 123 ALA n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ? 'Trimeresurus flavoviridis' 88087 Trimeresurus ? ? ? ? VENOM ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? 'Trimeresurus flavoviridis' 88087 Trimeresurus ? ? ? ? VENOM ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PIR JC4329 1 JC4329 ? ? ? 2 UNP IXB_TRIFL 2 P23807 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1BJ3 A 1 ? 129 ? JC4329 1 ? 129 ? 1 129 2 2 1BJ3 B 1 ? 123 ? P23807 24 ? 146 ? 1 123 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1BJ3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_percent_sol 47 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pdbx_details ;PROTEIN WAS CRYSTALLIZED BY MIXING WITH EQUAL VOLUME OF 60% AMMONIUM SULPHATE IN 20 MM TRI-HCL BUFFER AT PH 7.8 CONTAINING AND AT ROOM TEMPERATURE ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 1995-06-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-6A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-6A _diffrn_source.pdbx_wavelength 1.00 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1BJ3 _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100.0 _reflns.d_resolution_high 2.6 _reflns.number_obs 7253 _reflns.number_all ? _reflns.percent_possible_obs 90 _reflns.pdbx_Rmerge_I_obs 0.102 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.0 _reflns.B_iso_Wilson_estimate 25.1 _reflns.pdbx_redundancy 4.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.72 _reflns_shell.percent_possible_all 74 _reflns_shell.Rmerge_I_obs 0.145 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 8.6 _reflns_shell.pdbx_redundancy 2.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1BJ3 _refine.ls_number_reflns_obs 6570 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 10000000.00 _refine.pdbx_data_cutoff_low_absF 0.001 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 2.6 _refine.ls_percent_reflns_obs 88.8 _refine.ls_R_factor_obs 0.182 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.182 _refine.ls_R_factor_R_free 0.271 _refine.ls_R_factor_R_free_error 0.014 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.6 _refine.ls_number_reflns_R_free 367 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 17.3 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SIRAS _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1BJ3 _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs 0.30 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.37 _refine_analyze.Luzzati_sigma_a_free 0.35 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2047 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 83 _refine_hist.number_atoms_total 2132 _refine_hist.d_res_high 2.6 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.8 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 25.3 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.51 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.44 1.50 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.16 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 2.13 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 3.00 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low 2.75 _refine_ls_shell.number_reflns_R_work 842 _refine_ls_shell.R_factor_R_work 0.234 _refine_ls_shell.percent_reflns_obs 73.1 _refine_ls_shell.R_factor_R_free 0.33 _refine_ls_shell.R_factor_R_free_error 0.045 _refine_ls_shell.percent_reflns_R_free 5.9 _refine_ls_shell.number_reflns_R_free 53 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM19.SOL TOPH19X.ION 'X-RAY DIFFRACTION' 3 PARAM19X.ION TOPH19X.SOL 'X-RAY DIFFRACTION' # _struct.entry_id 1BJ3 _struct.title ;CRYSTAL STRUCTURE OF COAGULATION FACTOR IX-BINDING PROTEIN (IX-BP) FROM VENOM OF HABU SNAKE WITH A HETERODIMER OF C-TYPE LECTIN DOMAINS ; _struct.pdbx_descriptor 'COAGULATION FACTOR IX-BINDING PROTEIN A, COAGULATION FACTOR IX-BINDING PROTEIN B' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1BJ3 _struct_keywords.pdbx_keywords 'COLLAGEN BINDING PROTEIN' _struct_keywords.text 'COAGULATION FACTOR IX-BINDING, HETERODIMER, VENOM, HABU SNAKE, C-TYPE LECTIN SUPERFAMILY, COLLAGEN BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1 TRP A 23 ? GLN A 33 ? TRP A 23 GLN A 33 1 ? 11 HELX_P HELX_P2 H2 ALA A 45 ? THR A 56 ? ALA A 45 THR A 56 1 ? 12 HELX_P HELX_P3 H3 TRP B 23 ? GLN B 33 ? TRP B 23 GLN B 33 1 ? 11 HELX_P HELX_P4 H4 SER B 45 ? PHE B 56 ? SER B 45 PHE B 56 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 13 SG ? ? A CYS 2 A CYS 13 1_555 ? ? ? ? ? ? ? 2.018 ? disulf2 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 30 A CYS 127 1_555 ? ? ? ? ? ? ? 2.017 ? disulf3 disulf ? ? A CYS 79 SG ? ? ? 1_555 B CYS 75 SG ? ? A CYS 79 B CYS 75 1_555 ? ? ? ? ? ? ? 2.019 ? disulf4 disulf ? ? A CYS 102 SG ? ? ? 1_555 A CYS 119 SG ? ? A CYS 102 A CYS 119 1_555 ? ? ? ? ? ? ? 2.014 ? disulf5 disulf ? ? B CYS 2 SG ? ? ? 1_555 B CYS 13 SG ? ? B CYS 2 B CYS 13 1_555 ? ? ? ? ? ? ? 2.021 ? disulf6 disulf ? ? B CYS 30 SG ? ? ? 1_555 B CYS 119 SG ? ? B CYS 30 B CYS 119 1_555 ? ? ? ? ? ? ? 2.043 ? disulf7 disulf ? ? B CYS 96 SG ? ? ? 1_555 B CYS 111 SG ? ? B CYS 96 B CYS 111 1_555 ? ? ? ? ? ? ? 2.027 ? metalc1 metalc ? ? A SER 41 O ? ? ? 1_555 C CA . CA ? ? A SER 41 A CA 130 1_555 ? ? ? ? ? ? ? 2.467 ? metalc2 metalc ? ? A SER 41 OG ? ? ? 1_555 C CA . CA ? ? A SER 41 A CA 130 1_555 ? ? ? ? ? ? ? 2.594 ? metalc3 metalc ? ? A GLU 43 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 43 A CA 130 1_555 ? ? ? ? ? ? ? 2.513 ? metalc4 metalc ? ? A GLU 47 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 47 A CA 130 1_555 ? ? ? ? ? ? ? 2.775 ? metalc5 metalc ? ? A GLU 47 OE2 ? ? ? 1_555 C CA . CA ? ? A GLU 47 A CA 130 1_555 ? ? ? ? ? ? ? 2.273 ? metalc6 metalc ? ? A GLU 128 OE2 ? ? ? 1_555 C CA . CA ? ? A GLU 128 A CA 130 1_555 ? ? ? ? ? ? ? 2.420 ? metalc7 metalc ? ? B SER 41 O ? ? ? 1_555 D CA . CA ? ? B SER 41 B CA 124 1_555 ? ? ? ? ? ? ? 2.313 ? metalc8 metalc ? ? B SER 41 OG ? ? ? 1_555 D CA . CA ? ? B SER 41 B CA 124 1_555 ? ? ? ? ? ? ? 2.437 ? metalc9 metalc ? ? B GLN 43 OE1 ? ? ? 1_555 D CA . CA ? ? B GLN 43 B CA 124 1_555 ? ? ? ? ? ? ? 2.328 ? metalc10 metalc ? ? B GLU 47 OE2 ? ? ? 1_555 D CA . CA ? ? B GLU 47 B CA 124 1_555 ? ? ? ? ? ? ? 2.388 ? metalc11 metalc ? ? B GLU 120 OE2 ? ? ? 1_555 D CA . CA ? ? B GLU 120 B CA 124 1_555 ? ? ? ? ? ? ? 2.608 ? metalc12 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 130 A HOH 171 1_555 ? ? ? ? ? ? ? 2.514 ? metalc13 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 130 A HOH 170 1_555 ? ? ? ? ? ? ? 2.175 ? metalc14 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 124 B HOH 162 1_555 ? ? ? ? ? ? ? 2.219 ? metalc15 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 124 B HOH 157 1_555 ? ? ? ? ? ? ? 2.323 ? metalc16 metalc ? ? C CA . CA ? ? ? 1_555 A GLU 128 OE1 ? ? A CA 130 A GLU 128 1_555 ? ? ? ? ? ? ? 3.275 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details S1 ? 2 ? S2 ? 3 ? S3 ? 2 ? S4 ? 3 ? # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id S1 1 HIS A 12 ? LEU A 19 ? HIS A 12 LEU A 19 S1 2 ASN A 123 ? ALA A 129 ? ASN A 123 ALA A 129 S2 1 VAL A 66 ? ARG A 71 ? VAL A 66 ARG A 71 S2 2 CYS A 102 ? LEU A 105 ? CYS A 102 LEU A 105 S2 3 TRP A 114 ? TYR A 118 ? TRP A 114 TYR A 118 S3 1 HIS B 12 ? GLU B 19 ? HIS B 12 GLU B 19 S3 2 ALA B 115 ? ALA B 123 ? ALA B 115 ALA B 123 S4 1 PHE B 64 ? SER B 69 ? PHE B 64 SER B 69 S4 2 CYS B 96 ? PHE B 99 ? CYS B 96 PHE B 99 S4 3 TRP B 106 ? ALA B 110 ? TRP B 106 ALA B 110 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A 130' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA B 124' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 41 ? SER A 41 . ? 1_555 ? 2 AC1 6 GLU A 43 ? GLU A 43 . ? 1_555 ? 3 AC1 6 GLU A 47 ? GLU A 47 . ? 1_555 ? 4 AC1 6 GLU A 128 ? GLU A 128 . ? 1_555 ? 5 AC1 6 HOH E . ? HOH A 170 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH A 171 . ? 1_555 ? 7 AC2 6 SER B 41 ? SER B 41 . ? 1_555 ? 8 AC2 6 GLN B 43 ? GLN B 43 . ? 1_555 ? 9 AC2 6 GLU B 47 ? GLU B 47 . ? 1_555 ? 10 AC2 6 GLU B 120 ? GLU B 120 . ? 1_555 ? 11 AC2 6 HOH F . ? HOH B 157 . ? 1_555 ? 12 AC2 6 HOH F . ? HOH B 162 . ? 1_555 ? # _database_PDB_matrix.entry_id 1BJ3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1BJ3 _atom_sites.fract_transf_matrix[1][1] 0.017074 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001734 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017607 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025372 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 TYR 9 9 9 TYR TYR A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 HIS 12 12 12 HIS HIS A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 PHE 17 17 17 PHE PHE A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 TRP 23 23 23 TRP TRP A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 HIS 38 38 38 HIS HIS A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 GLN 53 53 53 GLN GLN A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 TRP 67 67 67 TRP TRP A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 CYS 79 79 79 CYS CYS A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 TRP 83 83 83 TRP TRP A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 TRP 94 94 94 TRP TRP A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 CYS 102 102 102 CYS CYS A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 PHE 111 111 111 PHE PHE A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 TRP 114 114 114 TRP TRP A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 TYR 118 118 118 TYR TYR A . n A 1 119 CYS 119 119 119 CYS CYS A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 GLN 122 122 122 GLN GLN A . n A 1 123 ASN 123 123 123 ASN ASN A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 ALA 129 129 129 ALA ALA A . n B 2 1 ASP 1 1 1 ASP ASP B . n B 2 2 CYS 2 2 2 CYS CYS B . n B 2 3 PRO 3 3 3 PRO PRO B . n B 2 4 SER 4 4 4 SER SER B . n B 2 5 ASP 5 5 5 ASP ASP B . n B 2 6 TRP 6 6 6 TRP TRP B . n B 2 7 SER 7 7 7 SER SER B . n B 2 8 SER 8 8 8 SER SER B . n B 2 9 TYR 9 9 9 TYR TYR B . n B 2 10 GLU 10 10 10 GLU GLU B . n B 2 11 GLY 11 11 11 GLY GLY B . n B 2 12 HIS 12 12 12 HIS HIS B . n B 2 13 CYS 13 13 13 CYS CYS B . n B 2 14 TYR 14 14 14 TYR TYR B . n B 2 15 LYS 15 15 15 LYS LYS B . n B 2 16 PRO 16 16 16 PRO PRO B . n B 2 17 PHE 17 17 17 PHE PHE B . n B 2 18 SER 18 18 18 SER SER B . n B 2 19 GLU 19 19 19 GLU GLU B . n B 2 20 PRO 20 20 20 PRO PRO B . n B 2 21 LYS 21 21 21 LYS LYS B . n B 2 22 ASN 22 22 22 ASN ASN B . n B 2 23 TRP 23 23 23 TRP TRP B . n B 2 24 ALA 24 24 24 ALA ALA B . n B 2 25 ASP 25 25 25 ASP ASP B . n B 2 26 ALA 26 26 26 ALA ALA B . n B 2 27 GLU 27 27 27 GLU GLU B . n B 2 28 ASN 28 28 28 ASN ASN B . n B 2 29 PHE 29 29 29 PHE PHE B . n B 2 30 CYS 30 30 30 CYS CYS B . n B 2 31 THR 31 31 31 THR THR B . n B 2 32 GLN 32 32 32 GLN GLN B . n B 2 33 GLN 33 33 33 GLN GLN B . n B 2 34 HIS 34 34 34 HIS HIS B . n B 2 35 ALA 35 35 35 ALA ALA B . n B 2 36 GLY 36 36 36 GLY GLY B . n B 2 37 GLY 37 37 37 GLY GLY B . n B 2 38 HIS 38 38 38 HIS HIS B . n B 2 39 LEU 39 39 39 LEU LEU B . n B 2 40 VAL 40 40 40 VAL VAL B . n B 2 41 SER 41 41 41 SER SER B . n B 2 42 PHE 42 42 42 PHE PHE B . n B 2 43 GLN 43 43 43 GLN GLN B . n B 2 44 SER 44 44 44 SER SER B . n B 2 45 SER 45 45 45 SER SER B . n B 2 46 GLU 46 46 46 GLU GLU B . n B 2 47 GLU 47 47 47 GLU GLU B . n B 2 48 ALA 48 48 48 ALA ALA B . n B 2 49 ASP 49 49 49 ASP ASP B . n B 2 50 PHE 50 50 50 PHE PHE B . n B 2 51 VAL 51 51 51 VAL VAL B . n B 2 52 VAL 52 52 52 VAL VAL B . n B 2 53 LYS 53 53 53 LYS LYS B . n B 2 54 LEU 54 54 54 LEU LEU B . n B 2 55 ALA 55 55 55 ALA ALA B . n B 2 56 PHE 56 56 56 PHE PHE B . n B 2 57 GLN 57 57 57 GLN GLN B . n B 2 58 THR 58 58 58 THR THR B . n B 2 59 PHE 59 59 59 PHE PHE B . n B 2 60 GLY 60 60 60 GLY GLY B . n B 2 61 HIS 61 61 61 HIS HIS B . n B 2 62 SER 62 62 62 SER SER B . n B 2 63 ILE 63 63 63 ILE ILE B . n B 2 64 PHE 64 64 64 PHE PHE B . n B 2 65 TRP 65 65 65 TRP TRP B . n B 2 66 MET 66 66 66 MET MET B . n B 2 67 GLY 67 67 67 GLY GLY B . n B 2 68 LEU 68 68 68 LEU LEU B . n B 2 69 SER 69 69 69 SER SER B . n B 2 70 ASN 70 70 70 ASN ASN B . n B 2 71 VAL 71 71 71 VAL VAL B . n B 2 72 TRP 72 72 72 TRP TRP B . n B 2 73 ASN 73 73 73 ASN ASN B . n B 2 74 GLN 74 74 74 GLN GLN B . n B 2 75 CYS 75 75 75 CYS CYS B . n B 2 76 ASN 76 76 76 ASN ASN B . n B 2 77 TRP 77 77 77 TRP TRP B . n B 2 78 GLN 78 78 78 GLN GLN B . n B 2 79 TRP 79 79 79 TRP TRP B . n B 2 80 SER 80 80 80 SER SER B . n B 2 81 ASN 81 81 81 ASN ASN B . n B 2 82 ALA 82 82 82 ALA ALA B . n B 2 83 ALA 83 83 83 ALA ALA B . n B 2 84 MET 84 84 84 MET MET B . n B 2 85 LEU 85 85 85 LEU LEU B . n B 2 86 ARG 86 86 86 ARG ARG B . n B 2 87 TYR 87 87 87 TYR TYR B . n B 2 88 LYS 88 88 88 LYS LYS B . n B 2 89 ALA 89 89 89 ALA ALA B . n B 2 90 TRP 90 90 90 TRP TRP B . n B 2 91 ALA 91 91 91 ALA ALA B . n B 2 92 GLU 92 92 92 GLU GLU B . n B 2 93 GLU 93 93 93 GLU GLU B . n B 2 94 SER 94 94 94 SER SER B . n B 2 95 TYR 95 95 95 TYR TYR B . n B 2 96 CYS 96 96 96 CYS CYS B . n B 2 97 VAL 97 97 97 VAL VAL B . n B 2 98 TYR 98 98 98 TYR TYR B . n B 2 99 PHE 99 99 99 PHE PHE B . n B 2 100 LYS 100 100 100 LYS LYS B . n B 2 101 SER 101 101 101 SER SER B . n B 2 102 THR 102 102 102 THR THR B . n B 2 103 ASN 103 103 103 ASN ASN B . n B 2 104 ASN 104 104 104 ASN ASN B . n B 2 105 LYS 105 105 105 LYS LYS B . n B 2 106 TRP 106 106 106 TRP TRP B . n B 2 107 ARG 107 107 107 ARG ARG B . n B 2 108 SER 108 108 108 SER SER B . n B 2 109 ARG 109 109 109 ARG ARG B . n B 2 110 ALA 110 110 110 ALA ALA B . n B 2 111 CYS 111 111 111 CYS CYS B . n B 2 112 ARG 112 112 112 ARG ARG B . n B 2 113 MET 113 113 113 MET MET B . n B 2 114 MET 114 114 114 MET MET B . n B 2 115 ALA 115 115 115 ALA ALA B . n B 2 116 GLN 116 116 116 GLN GLN B . n B 2 117 PHE 117 117 117 PHE PHE B . n B 2 118 VAL 118 118 118 VAL VAL B . n B 2 119 CYS 119 119 119 CYS CYS B . n B 2 120 GLU 120 120 120 GLU GLU B . n B 2 121 PHE 121 121 121 PHE PHE B . n B 2 122 GLN 122 122 122 GLN GLN B . n B 2 123 ALA 123 123 123 ALA ALA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA 1 130 1 CA CA A . D 3 CA 1 124 2 CA CA B . E 4 HOH 1 131 8 HOH HOH A . E 4 HOH 2 132 9 HOH HOH A . E 4 HOH 3 133 22 HOH HOH A . E 4 HOH 4 134 23 HOH HOH A . E 4 HOH 5 135 24 HOH HOH A . E 4 HOH 6 136 25 HOH HOH A . E 4 HOH 7 137 26 HOH HOH A . E 4 HOH 8 138 27 HOH HOH A . E 4 HOH 9 139 28 HOH HOH A . E 4 HOH 10 140 29 HOH HOH A . E 4 HOH 11 141 30 HOH HOH A . E 4 HOH 12 142 31 HOH HOH A . E 4 HOH 13 143 32 HOH HOH A . E 4 HOH 14 144 33 HOH HOH A . E 4 HOH 15 145 34 HOH HOH A . E 4 HOH 16 146 35 HOH HOH A . E 4 HOH 17 147 36 HOH HOH A . E 4 HOH 18 148 37 HOH HOH A . E 4 HOH 19 149 38 HOH HOH A . E 4 HOH 20 150 39 HOH HOH A . E 4 HOH 21 151 43 HOH HOH A . E 4 HOH 22 152 44 HOH HOH A . E 4 HOH 23 153 45 HOH HOH A . E 4 HOH 24 154 46 HOH HOH A . E 4 HOH 25 155 47 HOH HOH A . E 4 HOH 26 156 48 HOH HOH A . E 4 HOH 27 157 49 HOH HOH A . E 4 HOH 28 158 50 HOH HOH A . E 4 HOH 29 159 51 HOH HOH A . E 4 HOH 30 160 52 HOH HOH A . E 4 HOH 31 161 53 HOH HOH A . E 4 HOH 32 162 54 HOH HOH A . E 4 HOH 33 163 55 HOH HOH A . E 4 HOH 34 164 56 HOH HOH A . E 4 HOH 35 165 57 HOH HOH A . E 4 HOH 36 166 58 HOH HOH A . E 4 HOH 37 167 59 HOH HOH A . E 4 HOH 38 168 60 HOH HOH A . E 4 HOH 39 169 62 HOH HOH A . E 4 HOH 40 170 77 HOH HOH A . E 4 HOH 41 171 83 HOH HOH A . F 4 HOH 1 125 1 HOH HOH B . F 4 HOH 2 126 2 HOH HOH B . F 4 HOH 3 127 3 HOH HOH B . F 4 HOH 4 128 4 HOH HOH B . F 4 HOH 5 129 5 HOH HOH B . F 4 HOH 6 130 6 HOH HOH B . F 4 HOH 7 131 7 HOH HOH B . F 4 HOH 8 132 10 HOH HOH B . F 4 HOH 9 133 11 HOH HOH B . F 4 HOH 10 134 12 HOH HOH B . F 4 HOH 11 135 13 HOH HOH B . F 4 HOH 12 136 14 HOH HOH B . F 4 HOH 13 137 15 HOH HOH B . F 4 HOH 14 138 16 HOH HOH B . F 4 HOH 15 139 17 HOH HOH B . F 4 HOH 16 140 18 HOH HOH B . F 4 HOH 17 141 19 HOH HOH B . F 4 HOH 18 142 20 HOH HOH B . F 4 HOH 19 143 21 HOH HOH B . F 4 HOH 20 144 40 HOH HOH B . F 4 HOH 21 145 41 HOH HOH B . F 4 HOH 22 146 42 HOH HOH B . F 4 HOH 23 147 61 HOH HOH B . F 4 HOH 24 148 63 HOH HOH B . F 4 HOH 25 149 64 HOH HOH B . F 4 HOH 26 150 65 HOH HOH B . F 4 HOH 27 151 66 HOH HOH B . F 4 HOH 28 152 67 HOH HOH B . F 4 HOH 29 153 68 HOH HOH B . F 4 HOH 30 154 69 HOH HOH B . F 4 HOH 31 155 70 HOH HOH B . F 4 HOH 32 156 71 HOH HOH B . F 4 HOH 33 157 72 HOH HOH B . F 4 HOH 34 158 73 HOH HOH B . F 4 HOH 35 159 74 HOH HOH B . F 4 HOH 36 160 75 HOH HOH B . F 4 HOH 37 161 76 HOH HOH B . F 4 HOH 38 162 78 HOH HOH B . F 4 HOH 39 163 79 HOH HOH B . F 4 HOH 40 164 80 HOH HOH B . F 4 HOH 41 165 81 HOH HOH B . F 4 HOH 42 166 82 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3740 ? 1 MORE -49 ? 1 'SSA (A^2)' 12210 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OG ? A SER 41 ? A SER 41 ? 1_555 59.7 ? 2 O ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 43 ? A GLU 43 ? 1_555 89.5 ? 3 OG ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 43 ? A GLU 43 ? 1_555 73.0 ? 4 O ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 47 ? A GLU 47 ? 1_555 65.0 ? 5 OG ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 47 ? A GLU 47 ? 1_555 116.5 ? 6 OE1 ? A GLU 43 ? A GLU 43 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 47 ? A GLU 47 ? 1_555 78.0 ? 7 O ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE2 ? A GLU 47 ? A GLU 47 ? 1_555 73.4 ? 8 OG ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE2 ? A GLU 47 ? A GLU 47 ? 1_555 128.9 ? 9 OE1 ? A GLU 43 ? A GLU 43 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE2 ? A GLU 47 ? A GLU 47 ? 1_555 128.5 ? 10 OE1 ? A GLU 47 ? A GLU 47 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE2 ? A GLU 47 ? A GLU 47 ? 1_555 50.6 ? 11 O ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 114.2 ? 12 OG ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 100.2 ? 13 OE1 ? A GLU 43 ? A GLU 43 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 148.4 ? 14 OE1 ? A GLU 47 ? A GLU 47 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 130.0 ? 15 OE2 ? A GLU 47 ? A GLU 47 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 80.3 ? 16 O ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 171 ? 1_555 128.8 ? 17 OG ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 171 ? 1_555 69.9 ? 18 OE1 ? A GLU 43 ? A GLU 43 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 171 ? 1_555 66.7 ? 19 OE1 ? A GLU 47 ? A GLU 47 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 171 ? 1_555 140.7 ? 20 OE2 ? A GLU 47 ? A GLU 47 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 171 ? 1_555 156.2 ? 21 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 171 ? 1_555 81.8 ? 22 O ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 170 ? 1_555 147.7 ? 23 OG ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 170 ? 1_555 142.4 ? 24 OE1 ? A GLU 43 ? A GLU 43 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 170 ? 1_555 81.0 ? 25 OE1 ? A GLU 47 ? A GLU 47 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 170 ? 1_555 82.9 ? 26 OE2 ? A GLU 47 ? A GLU 47 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 170 ? 1_555 88.5 ? 27 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 170 ? 1_555 87.9 ? 28 O ? E HOH . ? A HOH 171 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 O ? E HOH . ? A HOH 170 ? 1_555 75.1 ? 29 O ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 90.6 ? 30 OG ? A SER 41 ? A SER 41 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 58.7 ? 31 OE1 ? A GLU 43 ? A GLU 43 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 123.1 ? 32 OE1 ? A GLU 47 ? A GLU 47 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 148.8 ? 33 OE2 ? A GLU 47 ? A GLU 47 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 105.7 ? 34 OE2 ? A GLU 128 ? A GLU 128 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 41.4 ? 35 O ? E HOH . ? A HOH 171 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 69.7 ? 36 O ? E HOH . ? A HOH 170 ? 1_555 CA ? C CA . ? A CA 130 ? 1_555 OE1 ? A GLU 128 ? A GLU 128 ? 1_555 120.4 ? 37 O ? B SER 41 ? B SER 41 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 OG ? B SER 41 ? B SER 41 ? 1_555 64.5 ? 38 O ? B SER 41 ? B SER 41 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 OE1 ? B GLN 43 ? B GLN 43 ? 1_555 76.6 ? 39 OG ? B SER 41 ? B SER 41 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 OE1 ? B GLN 43 ? B GLN 43 ? 1_555 69.0 ? 40 O ? B SER 41 ? B SER 41 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 OE2 ? B GLU 47 ? B GLU 47 ? 1_555 67.4 ? 41 OG ? B SER 41 ? B SER 41 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 OE2 ? B GLU 47 ? B GLU 47 ? 1_555 131.8 ? 42 OE1 ? B GLN 43 ? B GLN 43 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 OE2 ? B GLU 47 ? B GLU 47 ? 1_555 97.8 ? 43 O ? B SER 41 ? B SER 41 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 OE2 ? B GLU 120 ? B GLU 120 ? 1_555 79.7 ? 44 OG ? B SER 41 ? B SER 41 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 OE2 ? B GLU 120 ? B GLU 120 ? 1_555 94.0 ? 45 OE1 ? B GLN 43 ? B GLN 43 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 OE2 ? B GLU 120 ? B GLU 120 ? 1_555 155.1 ? 46 OE2 ? B GLU 47 ? B GLU 47 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 OE2 ? B GLU 120 ? B GLU 120 ? 1_555 79.8 ? 47 O ? B SER 41 ? B SER 41 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 O ? F HOH . ? B HOH 162 ? 1_555 124.6 ? 48 OG ? B SER 41 ? B SER 41 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 O ? F HOH . ? B HOH 162 ? 1_555 136.2 ? 49 OE1 ? B GLN 43 ? B GLN 43 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 O ? F HOH . ? B HOH 162 ? 1_555 72.3 ? 50 OE2 ? B GLU 47 ? B GLU 47 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 O ? F HOH . ? B HOH 162 ? 1_555 72.9 ? 51 OE2 ? B GLU 120 ? B GLU 120 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 O ? F HOH . ? B HOH 162 ? 1_555 128.9 ? 52 O ? B SER 41 ? B SER 41 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 O ? F HOH . ? B HOH 157 ? 1_555 139.2 ? 53 OG ? B SER 41 ? B SER 41 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 O ? F HOH . ? B HOH 157 ? 1_555 74.9 ? 54 OE1 ? B GLN 43 ? B GLN 43 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 O ? F HOH . ? B HOH 157 ? 1_555 92.4 ? 55 OE2 ? B GLU 47 ? B GLU 47 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 O ? F HOH . ? B HOH 157 ? 1_555 153.3 ? 56 OE2 ? B GLU 120 ? B GLU 120 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 O ? F HOH . ? B HOH 157 ? 1_555 100.7 ? 57 O ? F HOH . ? B HOH 162 ? 1_555 CA ? D CA . ? B CA 124 ? 1_555 O ? F HOH . ? B HOH 157 ? 1_555 87.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-08-16 2 'Structure model' 1 1 2007-10-16 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.classification' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal WEIS 'data scaling' . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 PHASES phasing 'PROGRAM PACKAGE' ? 4 X-PLOR refinement 2.1 ? 5 WEIS 'data reduction' . ? 6 # _pdbx_entry_details.entry_id 1BJ3 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;REFERENCE: MATURE PROTEIN LACKS INITIAL 23 RESIDUES, B CHAIN OF IX-BINDING PROTEIN IS THE SAME AS THAT OF FACTOR IX/FACTOR X-BINDING ANTICOAGULANT PROTEIN. ; # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A ILE 95 ? ? CA A ILE 95 ? ? C A ILE 95 ? ? 94.10 111.00 -16.90 2.70 N 2 1 CA A CYS 127 ? ? CB A CYS 127 ? ? SG A CYS 127 ? ? 121.60 114.20 7.40 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 9 ? ? -162.61 116.14 2 1 LYS A 18 ? ? -106.89 61.35 3 1 GLU A 32 ? ? -92.79 38.16 4 1 GLN A 60 ? ? -35.60 65.85 5 1 LYS A 63 ? ? -22.53 108.40 6 1 SER A 64 ? ? -177.91 -173.13 7 1 ASN A 93 ? ? -159.74 56.80 8 1 PHE A 111 ? ? 49.34 22.13 9 1 PRO B 3 ? ? -44.77 163.20 10 1 SER B 18 ? ? -143.82 37.15 11 1 HIS B 34 ? ? 176.52 145.31 12 1 THR B 58 ? ? -72.94 -84.26 13 1 HIS B 61 ? ? 176.36 101.29 14 1 ASN B 70 ? ? 30.34 43.23 15 1 ARG B 86 ? ? -138.08 -69.07 16 1 ALA B 89 ? ? -150.65 30.81 17 1 SER B 101 ? ? -43.00 -5.42 18 1 ASN B 104 ? ? -83.00 31.28 19 1 ARG B 112 ? ? -63.85 12.65 20 1 GLN B 116 ? ? -73.93 -166.66 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id TYR _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 91 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.089 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 water HOH #