data_1BMQ # _entry.id 1BMQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1BMQ pdb_00001bmq 10.2210/pdb1bmq/pdb RCSB RCSB008113 ? ? WWPDB D_1000008113 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1BMQ _pdbx_database_status.recvd_initial_deposition_date 1998-07-24 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Okamoto, Y.' 1 'Anan, H.' 2 'Nakai, E.' 3 'Morihira, K.' 4 'Yonetoku, Y.' 5 'Kurihara, H.' 6 'Katayama, N.' 7 'Sakashita, H.' 8 'Terai, Y.' 9 'Takeuchi, M.' 10 'Shibanuma, T.' 11 'Isomura, Y.' 12 # _citation.id primary _citation.title ;Peptide based interleukin-1 beta converting enzyme (ICE) inhibitors: synthesis, structure activity relationships and crystallographic study of the ICE-inhibitor complex. ; _citation.journal_abbrev Chem.Pharm.Bull. _citation.journal_volume 47 _citation.page_first 11 _citation.page_last 21 _citation.year 1999 _citation.journal_id_ASTM CPBTAL _citation.country JA _citation.journal_id_ISSN 0009-2363 _citation.journal_id_CSD 0194 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9987822 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Okamoto, Y.' 1 ? primary 'Anan, H.' 2 ? primary 'Nakai, E.' 3 ? primary 'Morihira, K.' 4 ? primary 'Yonetoku, Y.' 5 ? primary 'Kurihara, H.' 6 ? primary 'Sakashita, H.' 7 ? primary 'Terai, Y.' 8 ? primary 'Takeuchi, M.' 9 ? primary 'Shibanuma, T.' 10 ? primary 'Isomura, Y.' 11 ? # _cell.entry_id 1BMQ _cell.length_a 64.700 _cell.length_b 64.700 _cell.length_c 161.400 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BMQ _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTEIN (INTERLEUKIN-1 BETA CONVERTASE)' 18810.723 1 3.4.22.36 ? ? 'THE INHIBITOR IS COVALENTLY ATTACHED TO THE SULPHUR ATOM OF CYSTEINE 285' 2 polymer man 'PROTEIN (INTERLEUKIN-1 BETA CONVERTASE)' 10258.755 1 3.4.22.36 ? ? 'THE INHIBITOR IS COVALENTLY ATTACHED TO THE SULPHUR ATOM OF CYSTEINE 285' 3 non-polymer syn '(3S)-N-METHANESULFONYL-3-({1-[N-(2-NAPHTOYL)-L-VALYL]-L-PROLYL}AMINO)-4-OXOBUTANAMIDE' 544.620 1 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'ICE, IL-1BETA CONVERTING ENZYME, CASPASE-1' 2 ICE # _entity_name_sys.entity_id 1 _entity_name_sys.name 'EC 3.4.22.26' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GNVKLCSLEEAQRIWKQKSAEIYPIMDKSSRTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASD MTTELEAFAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQACRGDSP GVVWFKD ; ;GNVKLCSLEEAQRIWKQKSAEIYPIMDKSSRTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASD MTTELEAFAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQACRGDSP GVVWFKD ; A ? 2 'polypeptide(L)' no no ;AIKKAHIEKDFIAFCSSTPDNVSWRHPTMGSVFIGRLIEHMQEYACSCDVEEIFRKVRFSFEQPDGRAQMPTTERVTLTR CFYLFPGH ; ;AIKKAHIEKDFIAFCSSTPDNVSWRHPTMGSVFIGRLIEHMQEYACSCDVEEIFRKVRFSFEQPDGRAQMPTTERVTLTR CFYLFPGH ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASN n 1 3 VAL n 1 4 LYS n 1 5 LEU n 1 6 CYS n 1 7 SER n 1 8 LEU n 1 9 GLU n 1 10 GLU n 1 11 ALA n 1 12 GLN n 1 13 ARG n 1 14 ILE n 1 15 TRP n 1 16 LYS n 1 17 GLN n 1 18 LYS n 1 19 SER n 1 20 ALA n 1 21 GLU n 1 22 ILE n 1 23 TYR n 1 24 PRO n 1 25 ILE n 1 26 MET n 1 27 ASP n 1 28 LYS n 1 29 SER n 1 30 SER n 1 31 ARG n 1 32 THR n 1 33 ARG n 1 34 LEU n 1 35 ALA n 1 36 LEU n 1 37 ILE n 1 38 ILE n 1 39 CYS n 1 40 ASN n 1 41 GLU n 1 42 GLU n 1 43 PHE n 1 44 ASP n 1 45 SER n 1 46 ILE n 1 47 PRO n 1 48 ARG n 1 49 ARG n 1 50 THR n 1 51 GLY n 1 52 ALA n 1 53 GLU n 1 54 VAL n 1 55 ASP n 1 56 ILE n 1 57 THR n 1 58 GLY n 1 59 MET n 1 60 THR n 1 61 MET n 1 62 LEU n 1 63 LEU n 1 64 GLN n 1 65 ASN n 1 66 LEU n 1 67 GLY n 1 68 TYR n 1 69 SER n 1 70 VAL n 1 71 ASP n 1 72 VAL n 1 73 LYS n 1 74 LYS n 1 75 ASN n 1 76 LEU n 1 77 THR n 1 78 ALA n 1 79 SER n 1 80 ASP n 1 81 MET n 1 82 THR n 1 83 THR n 1 84 GLU n 1 85 LEU n 1 86 GLU n 1 87 ALA n 1 88 PHE n 1 89 ALA n 1 90 HIS n 1 91 ARG n 1 92 PRO n 1 93 GLU n 1 94 HIS n 1 95 LYS n 1 96 THR n 1 97 SER n 1 98 ASP n 1 99 SER n 1 100 THR n 1 101 PHE n 1 102 LEU n 1 103 VAL n 1 104 PHE n 1 105 MET n 1 106 SER n 1 107 HIS n 1 108 GLY n 1 109 ILE n 1 110 ARG n 1 111 GLU n 1 112 GLY n 1 113 ILE n 1 114 CYS n 1 115 GLY n 1 116 LYS n 1 117 LYS n 1 118 HIS n 1 119 SER n 1 120 GLU n 1 121 GLN n 1 122 VAL n 1 123 PRO n 1 124 ASP n 1 125 ILE n 1 126 LEU n 1 127 GLN n 1 128 LEU n 1 129 ASN n 1 130 ALA n 1 131 ILE n 1 132 PHE n 1 133 ASN n 1 134 MET n 1 135 LEU n 1 136 ASN n 1 137 THR n 1 138 LYS n 1 139 ASN n 1 140 CYS n 1 141 PRO n 1 142 SER n 1 143 LEU n 1 144 LYS n 1 145 ASP n 1 146 LYS n 1 147 PRO n 1 148 LYS n 1 149 VAL n 1 150 ILE n 1 151 ILE n 1 152 ILE n 1 153 GLN n 1 154 ALA n 1 155 CYS n 1 156 ARG n 1 157 GLY n 1 158 ASP n 1 159 SER n 1 160 PRO n 1 161 GLY n 1 162 VAL n 1 163 VAL n 1 164 TRP n 1 165 PHE n 1 166 LYS n 1 167 ASP n 2 1 ALA n 2 2 ILE n 2 3 LYS n 2 4 LYS n 2 5 ALA n 2 6 HIS n 2 7 ILE n 2 8 GLU n 2 9 LYS n 2 10 ASP n 2 11 PHE n 2 12 ILE n 2 13 ALA n 2 14 PHE n 2 15 CYS n 2 16 SER n 2 17 SER n 2 18 THR n 2 19 PRO n 2 20 ASP n 2 21 ASN n 2 22 VAL n 2 23 SER n 2 24 TRP n 2 25 ARG n 2 26 HIS n 2 27 PRO n 2 28 THR n 2 29 MET n 2 30 GLY n 2 31 SER n 2 32 VAL n 2 33 PHE n 2 34 ILE n 2 35 GLY n 2 36 ARG n 2 37 LEU n 2 38 ILE n 2 39 GLU n 2 40 HIS n 2 41 MET n 2 42 GLN n 2 43 GLU n 2 44 TYR n 2 45 ALA n 2 46 CYS n 2 47 SER n 2 48 CYS n 2 49 ASP n 2 50 VAL n 2 51 GLU n 2 52 GLU n 2 53 ILE n 2 54 PHE n 2 55 ARG n 2 56 LYS n 2 57 VAL n 2 58 ARG n 2 59 PHE n 2 60 SER n 2 61 PHE n 2 62 GLU n 2 63 GLN n 2 64 PRO n 2 65 ASP n 2 66 GLY n 2 67 ARG n 2 68 ALA n 2 69 GLN n 2 70 MET n 2 71 PRO n 2 72 THR n 2 73 THR n 2 74 GLU n 2 75 ARG n 2 76 VAL n 2 77 THR n 2 78 LEU n 2 79 THR n 2 80 ARG n 2 81 CYS n 2 82 PHE n 2 83 TYR n 2 84 LEU n 2 85 PHE n 2 86 PRO n 2 87 GLY n 2 88 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21(DE3)' ? ? ? ? ? ? ? PLASMID ? ? ? PET-3C ? ? 2 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21(DE3)' ? ? ? ? ? ? ? PLASMID ? ? ? PET-3C ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP CASP1_HUMAN P29466 1 131 ? ? 2 UNP CASP1_HUMAN P29466 2 317 ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1BMQ A 1 ? 167 ? P29466 131 ? 297 ? 131 297 2 2 1BMQ B 1 ? 88 ? P29466 317 ? 404 ? 317 404 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MNO non-polymer . '(3S)-N-METHANESULFONYL-3-({1-[N-(2-NAPHTOYL)-L-VALYL]-L-PROLYL}AMINO)-4-OXOBUTANAMIDE' ? 'C26 H32 N4 O7 S' 544.620 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1BMQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.90 _exptl_crystal.density_percent_sol 57.65 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'PROTEIN WAS CRYSTALLIZED FROM 10-15% PEG 6000, 100MM HEPES PH 7.0' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS II' _diffrn_detector.pdbx_collection_date 1997-08-15 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1BMQ _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 60 _reflns.d_resolution_high 2.0 _reflns.number_obs 15819 _reflns.number_all ? _reflns.percent_possible_obs 84.1 _reflns.pdbx_Rmerge_I_obs 0.097 _reflns.pdbx_Rsym_value 0.097 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 13.1 _reflns.pdbx_redundancy 3.1 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1BMQ _refine.ls_number_reflns_obs 10838 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 10000000.00 _refine.pdbx_data_cutoff_low_absF 0.00100 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 89.7 _refine.ls_R_factor_obs 0.2330000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2330000 _refine.ls_R_factor_R_free 0.3170000 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 1085 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 29.0 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1ICE _refine.pdbx_method_to_determine_struct OTHER _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1BMQ _refine_analyze.Luzzati_coordinate_error_obs 0.34 _refine_analyze.Luzzati_sigma_a_obs 0.50 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.45 _refine_analyze.Luzzati_sigma_a_free 0.58 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2032 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2070 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 26.9 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 0.50 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.77 1.50 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.88 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 2.71 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 4.23 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.65 _refine_ls_shell.number_reflns_R_work 1333 _refine_ls_shell.R_factor_R_work 0.3410000 _refine_ls_shell.percent_reflns_obs 75.3 _refine_ls_shell.R_factor_R_free 0.3820000 _refine_ls_shell.R_factor_R_free_error 0.032 _refine_ls_shell.percent_reflns_R_free 9.7 _refine_ls_shell.number_reflns_R_free 144 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 MSI_XPLOR_PROTEIN_REP.PAR MSI_XPLOR_TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 MNO.PARAM MNO.TOPH 'X-RAY DIFFRACTION' # _struct.entry_id 1BMQ _struct.title ;CRYSTAL STRUCTURE OF THE COMPLEX OF INTERLEUKIN-1BETA CONVERTING ENZYME (ICE) WITH A PEPTIDE BASED INHIBITOR, (3S )-N-METHANESULFONYL-3-({1-[N-(2-NAPHTOYL)-L-VALYL]-L-PROLYL }AMINO)-4-OXOBUTANAMIDE ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1BMQ _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'CASPASE, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 8 ? GLU A 21 ? LEU A 138 GLU A 151 1 ? 14 HELX_P HELX_P2 2 ALA A 52 ? LEU A 66 ? ALA A 182 LEU A 196 5 ? 15 HELX_P HELX_P3 3 ALA A 78 ? GLU A 84 ? ALA A 208 GLU A 214 1 ? 7 HELX_P HELX_P4 4 GLU A 86 ? HIS A 90 ? GLU A 216 HIS A 220 1 ? 5 HELX_P HELX_P5 5 PRO A 92 ? THR A 96 ? PRO A 222 THR A 226 5 ? 5 HELX_P HELX_P6 6 LEU A 128 ? MET A 134 ? LEU A 258 MET A 264 1 ? 7 HELX_P HELX_P7 7 VAL B 32 ? TYR B 44 ? VAL B 348 TYR B 360 1 ? 13 HELX_P HELX_P8 8 VAL B 50 ? PHE B 61 ? VAL B 366 PHE B 377 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag none _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 155 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_comp_id MNO _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C27 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 285 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id MNO _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.754 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 69 ? LYS A 74 ? SER A 199 LYS A 204 A 2 LEU A 34 ? CYS A 39 ? LEU A 164 CYS A 169 A 3 SER A 99 ? MET A 105 ? SER A 229 MET A 235 A 4 PRO A 147 ? GLN A 153 ? PRO A 277 GLN A 283 B 1 GLY A 112 ? CYS A 114 ? GLY A 242 CYS A 244 B 2 ILE A 125 ? GLN A 127 ? ILE A 255 GLN A 257 C 1 ALA B 13 ? CYS B 15 ? ALA B 329 CYS B 331 C 2 THR B 72 ? GLU B 74 ? THR B 388 GLU B 390 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 69 ? O SER A 199 N ALA A 35 ? N ALA A 165 A 2 3 O LEU A 34 ? O LEU A 164 N PHE A 101 ? N PHE A 231 A 3 4 O THR A 100 ? O THR A 230 N PRO A 147 ? N PRO A 277 B 1 2 O ILE A 113 ? O ILE A 243 N LEU A 126 ? N LEU A 256 C 1 2 O ALA B 13 ? O ALA B 329 N GLU B 74 ? N GLU B 390 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id MNO _struct_site.pdbx_auth_seq_id 601 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 9 _struct_site.details 'BINDING SITE FOR RESIDUE MNO A 601' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 PRO A 47 ? PRO A 177 . ? 1_555 ? 2 AC1 9 ARG A 49 ? ARG A 179 . ? 1_555 ? 3 AC1 9 HIS A 107 ? HIS A 237 . ? 1_555 ? 4 AC1 9 GLY A 108 ? GLY A 238 . ? 1_555 ? 5 AC1 9 CYS A 155 ? CYS A 285 . ? 1_555 ? 6 AC1 9 SER B 23 ? SER B 339 . ? 1_555 ? 7 AC1 9 TRP B 24 ? TRP B 340 . ? 1_555 ? 8 AC1 9 ARG B 25 ? ARG B 341 . ? 1_555 ? 9 AC1 9 ARG B 67 ? ARG B 383 . ? 1_555 ? # _database_PDB_matrix.entry_id 1BMQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1BMQ _atom_sites.fract_transf_matrix[1][1] 0.015456 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015456 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006196 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 131 131 GLY GLY A . n A 1 2 ASN 2 132 132 ASN ASN A . n A 1 3 VAL 3 133 133 VAL VAL A . n A 1 4 LYS 4 134 134 LYS LYS A . n A 1 5 LEU 5 135 135 LEU LEU A . n A 1 6 CYS 6 136 136 CYS CYS A . n A 1 7 SER 7 137 137 SER SER A . n A 1 8 LEU 8 138 138 LEU LEU A . n A 1 9 GLU 9 139 139 GLU GLU A . n A 1 10 GLU 10 140 140 GLU GLU A . n A 1 11 ALA 11 141 141 ALA ALA A . n A 1 12 GLN 12 142 142 GLN GLN A . n A 1 13 ARG 13 143 143 ARG ARG A . n A 1 14 ILE 14 144 144 ILE ILE A . n A 1 15 TRP 15 145 145 TRP TRP A . n A 1 16 LYS 16 146 146 LYS LYS A . n A 1 17 GLN 17 147 147 GLN GLN A . n A 1 18 LYS 18 148 148 LYS LYS A . n A 1 19 SER 19 149 149 SER SER A . n A 1 20 ALA 20 150 150 ALA ALA A . n A 1 21 GLU 21 151 151 GLU GLU A . n A 1 22 ILE 22 152 152 ILE ILE A . n A 1 23 TYR 23 153 153 TYR TYR A . n A 1 24 PRO 24 154 154 PRO PRO A . n A 1 25 ILE 25 155 155 ILE ILE A . n A 1 26 MET 26 156 156 MET MET A . n A 1 27 ASP 27 157 157 ASP ASP A . n A 1 28 LYS 28 158 158 LYS LYS A . n A 1 29 SER 29 159 159 SER SER A . n A 1 30 SER 30 160 160 SER SER A . n A 1 31 ARG 31 161 161 ARG ARG A . n A 1 32 THR 32 162 162 THR THR A . n A 1 33 ARG 33 163 163 ARG ARG A . n A 1 34 LEU 34 164 164 LEU LEU A . n A 1 35 ALA 35 165 165 ALA ALA A . n A 1 36 LEU 36 166 166 LEU LEU A . n A 1 37 ILE 37 167 167 ILE ILE A . n A 1 38 ILE 38 168 168 ILE ILE A . n A 1 39 CYS 39 169 169 CYS CYS A . n A 1 40 ASN 40 170 170 ASN ASN A . n A 1 41 GLU 41 171 171 GLU GLU A . n A 1 42 GLU 42 172 172 GLU GLU A . n A 1 43 PHE 43 173 173 PHE PHE A . n A 1 44 ASP 44 174 174 ASP ASP A . n A 1 45 SER 45 175 175 SER SER A . n A 1 46 ILE 46 176 176 ILE ILE A . n A 1 47 PRO 47 177 177 PRO PRO A . n A 1 48 ARG 48 178 178 ARG ARG A . n A 1 49 ARG 49 179 179 ARG ARG A . n A 1 50 THR 50 180 180 THR THR A . n A 1 51 GLY 51 181 181 GLY GLY A . n A 1 52 ALA 52 182 182 ALA ALA A . n A 1 53 GLU 53 183 183 GLU GLU A . n A 1 54 VAL 54 184 184 VAL VAL A . n A 1 55 ASP 55 185 185 ASP ASP A . n A 1 56 ILE 56 186 186 ILE ILE A . n A 1 57 THR 57 187 187 THR THR A . n A 1 58 GLY 58 188 188 GLY GLY A . n A 1 59 MET 59 189 189 MET MET A . n A 1 60 THR 60 190 190 THR THR A . n A 1 61 MET 61 191 191 MET MET A . n A 1 62 LEU 62 192 192 LEU LEU A . n A 1 63 LEU 63 193 193 LEU LEU A . n A 1 64 GLN 64 194 194 GLN GLN A . n A 1 65 ASN 65 195 195 ASN ASN A . n A 1 66 LEU 66 196 196 LEU LEU A . n A 1 67 GLY 67 197 197 GLY GLY A . n A 1 68 TYR 68 198 198 TYR TYR A . n A 1 69 SER 69 199 199 SER SER A . n A 1 70 VAL 70 200 200 VAL VAL A . n A 1 71 ASP 71 201 201 ASP ASP A . n A 1 72 VAL 72 202 202 VAL VAL A . n A 1 73 LYS 73 203 203 LYS LYS A . n A 1 74 LYS 74 204 204 LYS LYS A . n A 1 75 ASN 75 205 205 ASN ASN A . n A 1 76 LEU 76 206 206 LEU LEU A . n A 1 77 THR 77 207 207 THR THR A . n A 1 78 ALA 78 208 208 ALA ALA A . n A 1 79 SER 79 209 209 SER SER A . n A 1 80 ASP 80 210 210 ASP ASP A . n A 1 81 MET 81 211 211 MET MET A . n A 1 82 THR 82 212 212 THR THR A . n A 1 83 THR 83 213 213 THR THR A . n A 1 84 GLU 84 214 214 GLU GLU A . n A 1 85 LEU 85 215 215 LEU LEU A . n A 1 86 GLU 86 216 216 GLU GLU A . n A 1 87 ALA 87 217 217 ALA ALA A . n A 1 88 PHE 88 218 218 PHE PHE A . n A 1 89 ALA 89 219 219 ALA ALA A . n A 1 90 HIS 90 220 220 HIS HIS A . n A 1 91 ARG 91 221 221 ARG ARG A . n A 1 92 PRO 92 222 222 PRO PRO A . n A 1 93 GLU 93 223 223 GLU GLU A . n A 1 94 HIS 94 224 224 HIS HIS A . n A 1 95 LYS 95 225 225 LYS LYS A . n A 1 96 THR 96 226 226 THR THR A . n A 1 97 SER 97 227 227 SER SER A . n A 1 98 ASP 98 228 228 ASP ASP A . n A 1 99 SER 99 229 229 SER SER A . n A 1 100 THR 100 230 230 THR THR A . n A 1 101 PHE 101 231 231 PHE PHE A . n A 1 102 LEU 102 232 232 LEU LEU A . n A 1 103 VAL 103 233 233 VAL VAL A . n A 1 104 PHE 104 234 234 PHE PHE A . n A 1 105 MET 105 235 235 MET MET A . n A 1 106 SER 106 236 236 SER SER A . n A 1 107 HIS 107 237 237 HIS HIS A . n A 1 108 GLY 108 238 238 GLY GLY A . n A 1 109 ILE 109 239 239 ILE ILE A . n A 1 110 ARG 110 240 240 ARG ARG A . n A 1 111 GLU 111 241 241 GLU GLU A . n A 1 112 GLY 112 242 242 GLY GLY A . n A 1 113 ILE 113 243 243 ILE ILE A . n A 1 114 CYS 114 244 244 CYS CYS A . n A 1 115 GLY 115 245 245 GLY GLY A . n A 1 116 LYS 116 246 246 LYS LYS A . n A 1 117 LYS 117 247 247 LYS LYS A . n A 1 118 HIS 118 248 248 HIS HIS A . n A 1 119 SER 119 249 249 SER SER A . n A 1 120 GLU 120 250 250 GLU GLU A . n A 1 121 GLN 121 251 251 GLN GLN A . n A 1 122 VAL 122 252 252 VAL VAL A . n A 1 123 PRO 123 253 253 PRO PRO A . n A 1 124 ASP 124 254 254 ASP ASP A . n A 1 125 ILE 125 255 255 ILE ILE A . n A 1 126 LEU 126 256 256 LEU LEU A . n A 1 127 GLN 127 257 257 GLN GLN A . n A 1 128 LEU 128 258 258 LEU LEU A . n A 1 129 ASN 129 259 259 ASN ASN A . n A 1 130 ALA 130 260 260 ALA ALA A . n A 1 131 ILE 131 261 261 ILE ILE A . n A 1 132 PHE 132 262 262 PHE PHE A . n A 1 133 ASN 133 263 263 ASN ASN A . n A 1 134 MET 134 264 264 MET MET A . n A 1 135 LEU 135 265 265 LEU LEU A . n A 1 136 ASN 136 266 266 ASN ASN A . n A 1 137 THR 137 267 267 THR THR A . n A 1 138 LYS 138 268 268 LYS LYS A . n A 1 139 ASN 139 269 269 ASN ASN A . n A 1 140 CYS 140 270 270 CYS CYS A . n A 1 141 PRO 141 271 271 PRO PRO A . n A 1 142 SER 142 272 272 SER SER A . n A 1 143 LEU 143 273 273 LEU LEU A . n A 1 144 LYS 144 274 274 LYS LYS A . n A 1 145 ASP 145 275 275 ASP ASP A . n A 1 146 LYS 146 276 276 LYS LYS A . n A 1 147 PRO 147 277 277 PRO PRO A . n A 1 148 LYS 148 278 278 LYS LYS A . n A 1 149 VAL 149 279 279 VAL VAL A . n A 1 150 ILE 150 280 280 ILE ILE A . n A 1 151 ILE 151 281 281 ILE ILE A . n A 1 152 ILE 152 282 282 ILE ILE A . n A 1 153 GLN 153 283 283 GLN GLN A . n A 1 154 ALA 154 284 284 ALA ALA A . n A 1 155 CYS 155 285 285 CYS CYS A . n A 1 156 ARG 156 286 286 ARG ARG A . n A 1 157 GLY 157 287 287 GLY GLY A . n A 1 158 ASP 158 288 288 ASP ASP A . n A 1 159 SER 159 289 289 SER SER A . n A 1 160 PRO 160 290 290 PRO PRO A . n A 1 161 GLY 161 291 291 GLY GLY A . n A 1 162 VAL 162 292 292 VAL VAL A . n A 1 163 VAL 163 293 293 VAL VAL A . n A 1 164 TRP 164 294 294 TRP TRP A . n A 1 165 PHE 165 295 295 PHE PHE A . n A 1 166 LYS 166 296 296 LYS LYS A . n A 1 167 ASP 167 297 297 ASP ASP A . n B 2 1 ALA 1 317 317 ALA ALA B . n B 2 2 ILE 2 318 318 ILE ILE B . n B 2 3 LYS 3 319 319 LYS LYS B . n B 2 4 LYS 4 320 320 LYS LYS B . n B 2 5 ALA 5 321 321 ALA ALA B . n B 2 6 HIS 6 322 322 HIS HIS B . n B 2 7 ILE 7 323 323 ILE ILE B . n B 2 8 GLU 8 324 324 GLU GLU B . n B 2 9 LYS 9 325 325 LYS LYS B . n B 2 10 ASP 10 326 326 ASP ASP B . n B 2 11 PHE 11 327 327 PHE PHE B . n B 2 12 ILE 12 328 328 ILE ILE B . n B 2 13 ALA 13 329 329 ALA ALA B . n B 2 14 PHE 14 330 330 PHE PHE B . n B 2 15 CYS 15 331 331 CYS CYS B . n B 2 16 SER 16 332 332 SER SER B . n B 2 17 SER 17 333 333 SER SER B . n B 2 18 THR 18 334 334 THR THR B . n B 2 19 PRO 19 335 335 PRO PRO B . n B 2 20 ASP 20 336 336 ASP ASP B . n B 2 21 ASN 21 337 337 ASN ASN B . n B 2 22 VAL 22 338 338 VAL VAL B . n B 2 23 SER 23 339 339 SER SER B . n B 2 24 TRP 24 340 340 TRP TRP B . n B 2 25 ARG 25 341 341 ARG ARG B . n B 2 26 HIS 26 342 342 HIS HIS B . n B 2 27 PRO 27 343 343 PRO PRO B . n B 2 28 THR 28 344 344 THR THR B . n B 2 29 MET 29 345 345 MET MET B . n B 2 30 GLY 30 346 346 GLY GLY B . n B 2 31 SER 31 347 347 SER SER B . n B 2 32 VAL 32 348 348 VAL VAL B . n B 2 33 PHE 33 349 349 PHE PHE B . n B 2 34 ILE 34 350 350 ILE ILE B . n B 2 35 GLY 35 351 351 GLY GLY B . n B 2 36 ARG 36 352 352 ARG ARG B . n B 2 37 LEU 37 353 353 LEU LEU B . n B 2 38 ILE 38 354 354 ILE ILE B . n B 2 39 GLU 39 355 355 GLU GLU B . n B 2 40 HIS 40 356 356 HIS HIS B . n B 2 41 MET 41 357 357 MET MET B . n B 2 42 GLN 42 358 358 GLN GLN B . n B 2 43 GLU 43 359 359 GLU GLU B . n B 2 44 TYR 44 360 360 TYR TYR B . n B 2 45 ALA 45 361 361 ALA ALA B . n B 2 46 CYS 46 362 362 CYS CYS B . n B 2 47 SER 47 363 363 SER SER B . n B 2 48 CYS 48 364 364 CYS CYS B . n B 2 49 ASP 49 365 365 ASP ASP B . n B 2 50 VAL 50 366 366 VAL VAL B . n B 2 51 GLU 51 367 367 GLU GLU B . n B 2 52 GLU 52 368 368 GLU GLU B . n B 2 53 ILE 53 369 369 ILE ILE B . n B 2 54 PHE 54 370 370 PHE PHE B . n B 2 55 ARG 55 371 371 ARG ARG B . n B 2 56 LYS 56 372 372 LYS LYS B . n B 2 57 VAL 57 373 373 VAL VAL B . n B 2 58 ARG 58 374 374 ARG ARG B . n B 2 59 PHE 59 375 375 PHE PHE B . n B 2 60 SER 60 376 376 SER SER B . n B 2 61 PHE 61 377 377 PHE PHE B . n B 2 62 GLU 62 378 378 GLU GLU B . n B 2 63 GLN 63 379 379 GLN GLN B . n B 2 64 PRO 64 380 380 PRO PRO B . n B 2 65 ASP 65 381 381 ASP ASP B . n B 2 66 GLY 66 382 382 GLY GLY B . n B 2 67 ARG 67 383 383 ARG ARG B . n B 2 68 ALA 68 384 384 ALA ALA B . n B 2 69 GLN 69 385 385 GLN GLN B . n B 2 70 MET 70 386 386 MET MET B . n B 2 71 PRO 71 387 387 PRO PRO B . n B 2 72 THR 72 388 388 THR THR B . n B 2 73 THR 73 389 389 THR THR B . n B 2 74 GLU 74 390 390 GLU GLU B . n B 2 75 ARG 75 391 391 ARG ARG B . n B 2 76 VAL 76 392 392 VAL VAL B . n B 2 77 THR 77 393 393 THR THR B . n B 2 78 LEU 78 394 394 LEU LEU B . n B 2 79 THR 79 395 395 THR THR B . n B 2 80 ARG 80 396 396 ARG ARG B . n B 2 81 CYS 81 397 397 CYS CYS B . n B 2 82 PHE 82 398 398 PHE PHE B . n B 2 83 TYR 83 399 399 TYR TYR B . n B 2 84 LEU 84 400 400 LEU LEU B . n B 2 85 PHE 85 401 401 PHE PHE B . n B 2 86 PRO 86 402 402 PRO PRO B . n B 2 87 GLY 87 403 403 GLY GLY B . n B 2 88 HIS 88 404 404 HIS HIS B . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id MNO _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 601 _pdbx_nonpoly_scheme.pdb_mon_id MNO _pdbx_nonpoly_scheme.auth_mon_id MNO _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C 2 1,2 A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6170 ? 1 MORE -36 ? 1 'SSA (A^2)' 12860 ? 2 'ABSA (A^2)' 18090 ? 2 MORE -88 ? 2 'SSA (A^2)' 19960 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-07-29 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement 3.851 ? 2 PROCESS 'data reduction' . ? 3 PROCESS 'data scaling' . ? 4 X-PLOR phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 149 ? ? -4.56 -60.22 2 1 SER A 175 ? ? -120.29 -60.41 3 1 ASN A 205 ? ? 36.92 58.14 4 1 ARG A 221 ? ? -36.12 131.68 5 1 SER A 229 ? ? -175.56 -172.76 6 1 ASP A 254 ? ? -151.36 72.41 7 1 CYS A 270 ? ? -167.17 60.97 8 1 ILE B 328 ? ? -175.06 109.76 9 1 ASP B 336 ? ? 66.02 -10.96 10 1 PRO B 343 ? ? -55.95 -6.91 11 1 SER B 347 ? ? -48.31 153.51 12 1 ASP B 381 ? ? -173.54 70.10 13 1 ARG B 383 ? ? -102.73 60.01 14 1 ARG B 391 ? ? 39.81 46.84 15 1 THR B 393 ? ? -140.41 25.03 16 1 PHE B 401 ? ? 38.87 54.78 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 MNO C1 C Y N 247 MNO C2 C Y N 248 MNO C3 C Y N 249 MNO C4 C Y N 250 MNO C5 C Y N 251 MNO C6 C Y N 252 MNO C7 C Y N 253 MNO C8 C Y N 254 MNO C9 C Y N 255 MNO C10 C Y N 256 MNO C11 C N N 257 MNO O1 O N N 258 MNO N1 N N N 259 MNO C12 C N S 260 MNO C13 C N N 261 MNO O2 O N N 262 MNO C14 C N N 263 MNO C16 C N N 264 MNO C17 C N N 265 MNO N2 N N N 266 MNO C18 C N S 267 MNO C19 C N N 268 MNO O3 O N N 269 MNO C20 C N N 270 MNO C21 C N N 271 MNO C22 C N N 272 MNO N3 N N N 273 MNO C24 C N N 274 MNO C25 C N N 275 MNO N4 N N N 276 MNO O5 O N N 277 MNO C26 C N S 278 MNO S1 S N N 279 MNO O4 O N N 280 MNO O7 O N N 281 MNO C15 C N N 282 MNO O6 O N N 283 MNO C27 C N N 284 MNO H1 H N N 285 MNO H3 H N N 286 MNO H4 H N N 287 MNO H7 H N N 288 MNO H8 H N N 289 MNO H9 H N N 290 MNO H10 H N N 291 MNO HN1 H N N 292 MNO H12 H N N 293 MNO H14 H N N 294 MNO H161 H N N 295 MNO H162 H N N 296 MNO H163 H N N 297 MNO H171 H N N 298 MNO H172 H N N 299 MNO H173 H N N 300 MNO H18 H N N 301 MNO H201 H N N 302 MNO H202 H N N 303 MNO H211 H N N 304 MNO H212 H N N 305 MNO H221 H N N 306 MNO H222 H N N 307 MNO HN3 H N N 308 MNO H241 H N N 309 MNO H242 H N N 310 MNO HN4 H N N 311 MNO H26 H N N 312 MNO H151 H N N 313 MNO H152 H N N 314 MNO H153 H N N 315 MNO H27 H N N 316 PHE N N N N 317 PHE CA C N S 318 PHE C C N N 319 PHE O O N N 320 PHE CB C N N 321 PHE CG C Y N 322 PHE CD1 C Y N 323 PHE CD2 C Y N 324 PHE CE1 C Y N 325 PHE CE2 C Y N 326 PHE CZ C Y N 327 PHE OXT O N N 328 PHE H H N N 329 PHE H2 H N N 330 PHE HA H N N 331 PHE HB2 H N N 332 PHE HB3 H N N 333 PHE HD1 H N N 334 PHE HD2 H N N 335 PHE HE1 H N N 336 PHE HE2 H N N 337 PHE HZ H N N 338 PHE HXT H N N 339 PRO N N N N 340 PRO CA C N S 341 PRO C C N N 342 PRO O O N N 343 PRO CB C N N 344 PRO CG C N N 345 PRO CD C N N 346 PRO OXT O N N 347 PRO H H N N 348 PRO HA H N N 349 PRO HB2 H N N 350 PRO HB3 H N N 351 PRO HG2 H N N 352 PRO HG3 H N N 353 PRO HD2 H N N 354 PRO HD3 H N N 355 PRO HXT H N N 356 SER N N N N 357 SER CA C N S 358 SER C C N N 359 SER O O N N 360 SER CB C N N 361 SER OG O N N 362 SER OXT O N N 363 SER H H N N 364 SER H2 H N N 365 SER HA H N N 366 SER HB2 H N N 367 SER HB3 H N N 368 SER HG H N N 369 SER HXT H N N 370 THR N N N N 371 THR CA C N S 372 THR C C N N 373 THR O O N N 374 THR CB C N R 375 THR OG1 O N N 376 THR CG2 C N N 377 THR OXT O N N 378 THR H H N N 379 THR H2 H N N 380 THR HA H N N 381 THR HB H N N 382 THR HG1 H N N 383 THR HG21 H N N 384 THR HG22 H N N 385 THR HG23 H N N 386 THR HXT H N N 387 TRP N N N N 388 TRP CA C N S 389 TRP C C N N 390 TRP O O N N 391 TRP CB C N N 392 TRP CG C Y N 393 TRP CD1 C Y N 394 TRP CD2 C Y N 395 TRP NE1 N Y N 396 TRP CE2 C Y N 397 TRP CE3 C Y N 398 TRP CZ2 C Y N 399 TRP CZ3 C Y N 400 TRP CH2 C Y N 401 TRP OXT O N N 402 TRP H H N N 403 TRP H2 H N N 404 TRP HA H N N 405 TRP HB2 H N N 406 TRP HB3 H N N 407 TRP HD1 H N N 408 TRP HE1 H N N 409 TRP HE3 H N N 410 TRP HZ2 H N N 411 TRP HZ3 H N N 412 TRP HH2 H N N 413 TRP HXT H N N 414 TYR N N N N 415 TYR CA C N S 416 TYR C C N N 417 TYR O O N N 418 TYR CB C N N 419 TYR CG C Y N 420 TYR CD1 C Y N 421 TYR CD2 C Y N 422 TYR CE1 C Y N 423 TYR CE2 C Y N 424 TYR CZ C Y N 425 TYR OH O N N 426 TYR OXT O N N 427 TYR H H N N 428 TYR H2 H N N 429 TYR HA H N N 430 TYR HB2 H N N 431 TYR HB3 H N N 432 TYR HD1 H N N 433 TYR HD2 H N N 434 TYR HE1 H N N 435 TYR HE2 H N N 436 TYR HH H N N 437 TYR HXT H N N 438 VAL N N N N 439 VAL CA C N S 440 VAL C C N N 441 VAL O O N N 442 VAL CB C N N 443 VAL CG1 C N N 444 VAL CG2 C N N 445 VAL OXT O N N 446 VAL H H N N 447 VAL H2 H N N 448 VAL HA H N N 449 VAL HB H N N 450 VAL HG11 H N N 451 VAL HG12 H N N 452 VAL HG13 H N N 453 VAL HG21 H N N 454 VAL HG22 H N N 455 VAL HG23 H N N 456 VAL HXT H N N 457 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 MNO C1 C2 doub Y N 235 MNO C1 C6 sing Y N 236 MNO C1 H1 sing N N 237 MNO C2 C3 sing Y N 238 MNO C2 C11 sing N N 239 MNO C3 C4 doub Y N 240 MNO C3 H3 sing N N 241 MNO C4 C5 sing Y N 242 MNO C4 H4 sing N N 243 MNO C5 C6 doub Y N 244 MNO C5 C10 sing Y N 245 MNO C6 C7 sing Y N 246 MNO C7 C8 doub Y N 247 MNO C7 H7 sing N N 248 MNO C8 C9 sing Y N 249 MNO C8 H8 sing N N 250 MNO C9 C10 doub Y N 251 MNO C9 H9 sing N N 252 MNO C10 H10 sing N N 253 MNO C11 O1 doub N N 254 MNO C11 N1 sing N N 255 MNO N1 C12 sing N N 256 MNO N1 HN1 sing N N 257 MNO C12 C13 sing N N 258 MNO C12 C14 sing N N 259 MNO C12 H12 sing N N 260 MNO C13 O2 doub N N 261 MNO C13 N2 sing N N 262 MNO C14 C16 sing N N 263 MNO C14 C17 sing N N 264 MNO C14 H14 sing N N 265 MNO C16 H161 sing N N 266 MNO C16 H162 sing N N 267 MNO C16 H163 sing N N 268 MNO C17 H171 sing N N 269 MNO C17 H172 sing N N 270 MNO C17 H173 sing N N 271 MNO N2 C18 sing N N 272 MNO N2 C22 sing N N 273 MNO C18 C19 sing N N 274 MNO C18 C20 sing N N 275 MNO C18 H18 sing N N 276 MNO C19 O3 doub N N 277 MNO C19 N3 sing N N 278 MNO C20 C21 sing N N 279 MNO C20 H201 sing N N 280 MNO C20 H202 sing N N 281 MNO C21 C22 sing N N 282 MNO C21 H211 sing N N 283 MNO C21 H212 sing N N 284 MNO C22 H221 sing N N 285 MNO C22 H222 sing N N 286 MNO N3 C26 sing N N 287 MNO N3 HN3 sing N N 288 MNO C24 C25 sing N N 289 MNO C24 C26 sing N N 290 MNO C24 H241 sing N N 291 MNO C24 H242 sing N N 292 MNO C25 N4 sing N N 293 MNO C25 O5 doub N N 294 MNO N4 S1 sing N N 295 MNO N4 HN4 sing N N 296 MNO C26 C27 sing N N 297 MNO C26 H26 sing N N 298 MNO S1 O4 doub N N 299 MNO S1 O7 doub N N 300 MNO S1 C15 sing N N 301 MNO C15 H151 sing N N 302 MNO C15 H152 sing N N 303 MNO C15 H153 sing N N 304 MNO O6 C27 doub N N 305 MNO C27 H27 sing N N 306 PHE N CA sing N N 307 PHE N H sing N N 308 PHE N H2 sing N N 309 PHE CA C sing N N 310 PHE CA CB sing N N 311 PHE CA HA sing N N 312 PHE C O doub N N 313 PHE C OXT sing N N 314 PHE CB CG sing N N 315 PHE CB HB2 sing N N 316 PHE CB HB3 sing N N 317 PHE CG CD1 doub Y N 318 PHE CG CD2 sing Y N 319 PHE CD1 CE1 sing Y N 320 PHE CD1 HD1 sing N N 321 PHE CD2 CE2 doub Y N 322 PHE CD2 HD2 sing N N 323 PHE CE1 CZ doub Y N 324 PHE CE1 HE1 sing N N 325 PHE CE2 CZ sing Y N 326 PHE CE2 HE2 sing N N 327 PHE CZ HZ sing N N 328 PHE OXT HXT sing N N 329 PRO N CA sing N N 330 PRO N CD sing N N 331 PRO N H sing N N 332 PRO CA C sing N N 333 PRO CA CB sing N N 334 PRO CA HA sing N N 335 PRO C O doub N N 336 PRO C OXT sing N N 337 PRO CB CG sing N N 338 PRO CB HB2 sing N N 339 PRO CB HB3 sing N N 340 PRO CG CD sing N N 341 PRO CG HG2 sing N N 342 PRO CG HG3 sing N N 343 PRO CD HD2 sing N N 344 PRO CD HD3 sing N N 345 PRO OXT HXT sing N N 346 SER N CA sing N N 347 SER N H sing N N 348 SER N H2 sing N N 349 SER CA C sing N N 350 SER CA CB sing N N 351 SER CA HA sing N N 352 SER C O doub N N 353 SER C OXT sing N N 354 SER CB OG sing N N 355 SER CB HB2 sing N N 356 SER CB HB3 sing N N 357 SER OG HG sing N N 358 SER OXT HXT sing N N 359 THR N CA sing N N 360 THR N H sing N N 361 THR N H2 sing N N 362 THR CA C sing N N 363 THR CA CB sing N N 364 THR CA HA sing N N 365 THR C O doub N N 366 THR C OXT sing N N 367 THR CB OG1 sing N N 368 THR CB CG2 sing N N 369 THR CB HB sing N N 370 THR OG1 HG1 sing N N 371 THR CG2 HG21 sing N N 372 THR CG2 HG22 sing N N 373 THR CG2 HG23 sing N N 374 THR OXT HXT sing N N 375 TRP N CA sing N N 376 TRP N H sing N N 377 TRP N H2 sing N N 378 TRP CA C sing N N 379 TRP CA CB sing N N 380 TRP CA HA sing N N 381 TRP C O doub N N 382 TRP C OXT sing N N 383 TRP CB CG sing N N 384 TRP CB HB2 sing N N 385 TRP CB HB3 sing N N 386 TRP CG CD1 doub Y N 387 TRP CG CD2 sing Y N 388 TRP CD1 NE1 sing Y N 389 TRP CD1 HD1 sing N N 390 TRP CD2 CE2 doub Y N 391 TRP CD2 CE3 sing Y N 392 TRP NE1 CE2 sing Y N 393 TRP NE1 HE1 sing N N 394 TRP CE2 CZ2 sing Y N 395 TRP CE3 CZ3 doub Y N 396 TRP CE3 HE3 sing N N 397 TRP CZ2 CH2 doub Y N 398 TRP CZ2 HZ2 sing N N 399 TRP CZ3 CH2 sing Y N 400 TRP CZ3 HZ3 sing N N 401 TRP CH2 HH2 sing N N 402 TRP OXT HXT sing N N 403 TYR N CA sing N N 404 TYR N H sing N N 405 TYR N H2 sing N N 406 TYR CA C sing N N 407 TYR CA CB sing N N 408 TYR CA HA sing N N 409 TYR C O doub N N 410 TYR C OXT sing N N 411 TYR CB CG sing N N 412 TYR CB HB2 sing N N 413 TYR CB HB3 sing N N 414 TYR CG CD1 doub Y N 415 TYR CG CD2 sing Y N 416 TYR CD1 CE1 sing Y N 417 TYR CD1 HD1 sing N N 418 TYR CD2 CE2 doub Y N 419 TYR CD2 HD2 sing N N 420 TYR CE1 CZ doub Y N 421 TYR CE1 HE1 sing N N 422 TYR CE2 CZ sing Y N 423 TYR CE2 HE2 sing N N 424 TYR CZ OH sing N N 425 TYR OH HH sing N N 426 TYR OXT HXT sing N N 427 VAL N CA sing N N 428 VAL N H sing N N 429 VAL N H2 sing N N 430 VAL CA C sing N N 431 VAL CA CB sing N N 432 VAL CA HA sing N N 433 VAL C O doub N N 434 VAL C OXT sing N N 435 VAL CB CG1 sing N N 436 VAL CB CG2 sing N N 437 VAL CB HB sing N N 438 VAL CG1 HG11 sing N N 439 VAL CG1 HG12 sing N N 440 VAL CG1 HG13 sing N N 441 VAL CG2 HG21 sing N N 442 VAL CG2 HG22 sing N N 443 VAL CG2 HG23 sing N N 444 VAL OXT HXT sing N N 445 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name '(3S)-N-METHANESULFONYL-3-({1-[N-(2-NAPHTOYL)-L-VALYL]-L-PROLYL}AMINO)-4-OXOBUTANAMIDE' _pdbx_entity_nonpoly.comp_id MNO # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ICE _pdbx_initial_refinement_model.details ? #