data_1BNZ # _entry.id 1BNZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1BNZ pdb_00001bnz 10.2210/pdb1bnz/pdb NDB PD0012 ? ? RCSB RCSB008170 ? ? WWPDB D_1000008170 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-11-11 2 'Structure model' 1 1 2011-05-09 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-07-27 5 'Structure model' 1 4 2017-10-04 6 'Structure model' 1 5 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Other 4 5 'Structure model' 'Refinement description' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' chem_comp_atom 3 6 'Structure model' chem_comp_bond 4 6 'Structure model' database_2 5 6 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_database_2.pdbx_DOI' 2 6 'Structure model' '_database_2.pdbx_database_accession' 3 6 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1BNZ _pdbx_database_status.recvd_initial_deposition_date 1998-07-31 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gao, Y.-G.' 1 'Su, S.-Y.' 2 'Robinson, H.' 3 'Padmanabhan, S.' 4 'Lim, L.' 5 'Mccrary, B.S.' 6 'Edmondos, S.P.' 7 'Shrive, J.W.' 8 'Wang, A.H.-J.' 9 # _citation.id primary _citation.title 'The crystal structure of the hyperthermophile chromosomal protein Sso7d bound to DNA.' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 5 _citation.page_first 782 _citation.page_last 786 _citation.year 1998 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9731772 _citation.pdbx_database_id_DOI 10.1038/1822 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gao, Y.G.' 1 ? primary 'Su, S.Y.' 2 ? primary 'Robinson, H.' 3 ? primary 'Padmanabhan, S.' 4 ? primary 'Lim, L.' 5 ? primary 'McCrary, B.S.' 6 ? primary 'Edmondson, S.P.' 7 ? primary 'Shriver, J.W.' 8 ? primary 'Wang, A.H.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3'" 2425.629 2 ? ? ? ? 2 polymer man 'DNA-BINDING PROTEIN 7A' 7295.584 1 ? ? ? ? 3 water nat water 18.015 99 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DT)(DA)(DA)(DT)(DT)(DA)(DC)' GTAATTAC B,C ? 2 'polypeptide(L)' no no MATVKFKYKGEEKEVDISKIKKVWRVGKMISFTYDEGGGKTGRGAVSEKDAPKELLQMLEKQKK MATVKFKYKGEEKEVDISKIKKVWRVGKMISFTYDEGGGKTGRGAVSEKDAPKELLQMLEKQKK A ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DT n 1 3 DA n 1 4 DA n 1 5 DT n 1 6 DT n 1 7 DA n 1 8 DC n 2 1 MET n 2 2 ALA n 2 3 THR n 2 4 VAL n 2 5 LYS n 2 6 PHE n 2 7 LYS n 2 8 TYR n 2 9 LYS n 2 10 GLY n 2 11 GLU n 2 12 GLU n 2 13 LYS n 2 14 GLU n 2 15 VAL n 2 16 ASP n 2 17 ILE n 2 18 SER n 2 19 LYS n 2 20 ILE n 2 21 LYS n 2 22 LYS n 2 23 VAL n 2 24 TRP n 2 25 ARG n 2 26 VAL n 2 27 GLY n 2 28 LYS n 2 29 MET n 2 30 ILE n 2 31 SER n 2 32 PHE n 2 33 THR n 2 34 TYR n 2 35 ASP n 2 36 GLU n 2 37 GLY n 2 38 GLY n 2 39 GLY n 2 40 LYS n 2 41 THR n 2 42 GLY n 2 43 ARG n 2 44 GLY n 2 45 ALA n 2 46 VAL n 2 47 SER n 2 48 GLU n 2 49 LYS n 2 50 ASP n 2 51 ALA n 2 52 PRO n 2 53 LYS n 2 54 GLU n 2 55 LEU n 2 56 LEU n 2 57 GLN n 2 58 MET n 2 59 LEU n 2 60 GLU n 2 61 LYS n 2 62 GLN n 2 63 LYS n 2 64 LYS n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Sulfolobus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus acidocaldarius' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2285 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 66 66 DG G B . n A 1 2 DT 2 67 67 DT T B . n A 1 3 DA 3 68 68 DA A B . n A 1 4 DA 4 69 69 DA A B . n A 1 5 DT 5 70 70 DT T B . n A 1 6 DT 6 71 71 DT T B . n A 1 7 DA 7 72 72 DA A B . n A 1 8 DC 8 73 73 DC C B . n B 1 1 DG 1 74 74 DG G C . n B 1 2 DT 2 75 75 DT T C . n B 1 3 DA 3 76 76 DA A C . n B 1 4 DA 4 77 77 DA A C . n B 1 5 DT 5 78 78 DT T C . n B 1 6 DT 6 79 79 DT T C . n B 1 7 DA 7 80 80 DA A C . n B 1 8 DC 8 81 81 DC C C . n C 2 1 MET 1 1 1 MET MET A . n C 2 2 ALA 2 2 2 ALA ALA A . n C 2 3 THR 3 3 3 THR THR A . n C 2 4 VAL 4 4 4 VAL VAL A . n C 2 5 LYS 5 5 5 LYS LYS A . n C 2 6 PHE 6 6 6 PHE PHE A . n C 2 7 LYS 7 7 7 LYS LYS A . n C 2 8 TYR 8 8 8 TYR TYR A . n C 2 9 LYS 9 9 9 LYS LYS A . n C 2 10 GLY 10 10 10 GLY GLY A . n C 2 11 GLU 11 11 11 GLU GLU A . n C 2 12 GLU 12 12 12 GLU GLU A . n C 2 13 LYS 13 13 13 LYS LYS A . n C 2 14 GLU 14 14 14 GLU GLU A . n C 2 15 VAL 15 15 15 VAL VAL A . n C 2 16 ASP 16 16 16 ASP ASP A . n C 2 17 ILE 17 17 17 ILE ILE A . n C 2 18 SER 18 18 18 SER SER A . n C 2 19 LYS 19 19 19 LYS LYS A . n C 2 20 ILE 20 20 20 ILE ILE A . n C 2 21 LYS 21 21 21 LYS LYS A . n C 2 22 LYS 22 22 22 LYS LYS A . n C 2 23 VAL 23 23 23 VAL VAL A . n C 2 24 TRP 24 24 24 TRP TRP A . n C 2 25 ARG 25 25 25 ARG ARG A . n C 2 26 VAL 26 26 26 VAL VAL A . n C 2 27 GLY 27 27 27 GLY GLY A . n C 2 28 LYS 28 28 28 LYS LYS A . n C 2 29 MET 29 29 29 MET MET A . n C 2 30 ILE 30 30 30 ILE ILE A . n C 2 31 SER 31 31 31 SER SER A . n C 2 32 PHE 32 32 32 PHE PHE A . n C 2 33 THR 33 33 33 THR THR A . n C 2 34 TYR 34 34 34 TYR TYR A . n C 2 35 ASP 35 35 35 ASP ASP A . n C 2 36 GLU 36 36 36 GLU GLU A . n C 2 37 GLY 37 37 37 GLY GLY A . n C 2 38 GLY 38 38 38 GLY GLY A . n C 2 39 GLY 39 39 39 GLY GLY A . n C 2 40 LYS 40 40 40 LYS LYS A . n C 2 41 THR 41 41 41 THR THR A . n C 2 42 GLY 42 42 42 GLY GLY A . n C 2 43 ARG 43 43 43 ARG ARG A . n C 2 44 GLY 44 44 44 GLY GLY A . n C 2 45 ALA 45 45 45 ALA ALA A . n C 2 46 VAL 46 46 46 VAL VAL A . n C 2 47 SER 47 47 47 SER SER A . n C 2 48 GLU 48 48 48 GLU GLU A . n C 2 49 LYS 49 49 49 LYS LYS A . n C 2 50 ASP 50 50 50 ASP ASP A . n C 2 51 ALA 51 51 51 ALA ALA A . n C 2 52 PRO 52 52 52 PRO PRO A . n C 2 53 LYS 53 53 53 LYS LYS A . n C 2 54 GLU 54 54 54 GLU GLU A . n C 2 55 LEU 55 55 55 LEU LEU A . n C 2 56 LEU 56 56 56 LEU LEU A . n C 2 57 GLN 57 57 57 GLN GLN A . n C 2 58 MET 58 58 58 MET MET A . n C 2 59 LEU 59 59 59 LEU LEU A . n C 2 60 GLU 60 60 60 GLU GLU A . n C 2 61 LYS 61 61 61 LYS LYS A . n C 2 62 GLN 62 62 62 GLN GLN A . n C 2 63 LYS 63 63 63 LYS LYS A . n C 2 64 LYS 64 64 64 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 HOH 1 1006 1006 HOH HOH B . D 3 HOH 2 1017 1017 HOH HOH B . D 3 HOH 3 1020 1020 HOH HOH B . D 3 HOH 4 1023 1023 HOH HOH B . D 3 HOH 5 1030 1030 HOH HOH B . D 3 HOH 6 1038 1038 HOH HOH B . D 3 HOH 7 1089 1089 HOH HOH B . D 3 HOH 8 1093 1093 HOH HOH B . D 3 HOH 9 1094 1094 HOH HOH B . D 3 HOH 10 1107 1107 HOH HOH B . D 3 HOH 11 1129 1129 HOH HOH B . D 3 HOH 12 1130 1130 HOH HOH B . D 3 HOH 13 1143 1143 HOH HOH B . D 3 HOH 14 1176 1176 HOH HOH B . D 3 HOH 15 1180 1180 HOH HOH B . D 3 HOH 16 2055 2055 HOH HOH B . D 3 HOH 17 2097 2097 HOH HOH B . D 3 HOH 18 2110 2110 HOH HOH B . D 3 HOH 19 2152 2152 HOH HOH B . D 3 HOH 20 2164 2164 HOH HOH B . D 3 HOH 21 2165 2165 HOH HOH B . D 3 HOH 22 2169 2169 HOH HOH B . D 3 HOH 23 2172 2172 HOH HOH B . D 3 HOH 24 2173 2173 HOH HOH B . D 3 HOH 25 2177 2177 HOH HOH B . D 3 HOH 26 3032 3032 HOH HOH B . D 3 HOH 27 3099 3099 HOH HOH B . D 3 HOH 28 3108 3108 HOH HOH B . D 3 HOH 29 4037 4037 HOH HOH B . D 3 HOH 30 4064 4064 HOH HOH B . D 3 HOH 31 4123 4123 HOH HOH B . D 3 HOH 32 4172 4172 HOH HOH B . E 3 HOH 1 1047 1047 HOH HOH C . E 3 HOH 2 1076 1076 HOH HOH C . E 3 HOH 3 1100 1100 HOH HOH C . E 3 HOH 4 1105 1105 HOH HOH C . E 3 HOH 5 1141 1141 HOH HOH C . E 3 HOH 6 1154 1154 HOH HOH C . E 3 HOH 7 2012 2012 HOH HOH C . E 3 HOH 8 2066 2066 HOH HOH C . E 3 HOH 9 2095 2095 HOH HOH C . E 3 HOH 10 2102 2102 HOH HOH C . E 3 HOH 11 2151 2151 HOH HOH C . E 3 HOH 12 2156 2156 HOH HOH C . E 3 HOH 13 3139 3139 HOH HOH C . E 3 HOH 14 3151 3151 HOH HOH C . E 3 HOH 15 3171 3171 HOH HOH C . E 3 HOH 16 4120 4120 HOH HOH C . E 3 HOH 17 4140 4140 HOH HOH C . F 3 HOH 1 1001 1001 HOH HOH A . F 3 HOH 2 1016 1016 HOH HOH A . F 3 HOH 3 1026 1026 HOH HOH A . F 3 HOH 4 1045 1045 HOH HOH A . F 3 HOH 5 1068 1068 HOH HOH A . F 3 HOH 6 1097 1097 HOH HOH A . F 3 HOH 7 1101 1101 HOH HOH A . F 3 HOH 8 1104 1104 HOH HOH A . F 3 HOH 9 1118 1118 HOH HOH A . F 3 HOH 10 1126 1126 HOH HOH A . F 3 HOH 11 1131 1131 HOH HOH A . F 3 HOH 12 1137 1137 HOH HOH A . F 3 HOH 13 1144 1144 HOH HOH A . F 3 HOH 14 1147 1147 HOH HOH A . F 3 HOH 15 1149 1149 HOH HOH A . F 3 HOH 16 1166 1166 HOH HOH A . F 3 HOH 17 2046 2046 HOH HOH A . F 3 HOH 18 2049 2049 HOH HOH A . F 3 HOH 19 2058 2058 HOH HOH A . F 3 HOH 20 2071 2071 HOH HOH A . F 3 HOH 21 2075 2075 HOH HOH A . F 3 HOH 22 2079 2079 HOH HOH A . F 3 HOH 23 2088 2088 HOH HOH A . F 3 HOH 24 2094 2094 HOH HOH A . F 3 HOH 25 2101 2101 HOH HOH A . F 3 HOH 26 2112 2112 HOH HOH A . F 3 HOH 27 2148 2148 HOH HOH A . F 3 HOH 28 2167 2167 HOH HOH A . F 3 HOH 29 3031 3031 HOH HOH A . F 3 HOH 30 3068 3068 HOH HOH A . F 3 HOH 31 3095 3095 HOH HOH A . F 3 HOH 32 3097 3097 HOH HOH A . F 3 HOH 33 3125 3125 HOH HOH A . F 3 HOH 34 3126 3126 HOH HOH A . F 3 HOH 35 3131 3131 HOH HOH A . F 3 HOH 36 3142 3142 HOH HOH A . F 3 HOH 37 3146 3146 HOH HOH A . F 3 HOH 38 3163 3163 HOH HOH A . F 3 HOH 39 3172 3172 HOH HOH A . F 3 HOH 40 3173 3173 HOH HOH A . F 3 HOH 41 4024 4024 HOH HOH A . F 3 HOH 42 4028 4028 HOH HOH A . F 3 HOH 43 4040 4040 HOH HOH A . F 3 HOH 44 4056 4056 HOH HOH A . F 3 HOH 45 4065 4065 HOH HOH A . F 3 HOH 46 4072 4072 HOH HOH A . F 3 HOH 47 4105 4105 HOH HOH A . F 3 HOH 48 4113 4113 HOH HOH A . F 3 HOH 49 4142 4142 HOH HOH A . F 3 HOH 50 4148 4148 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASIT 'model building' . ? 1 X-PLOR refinement 3.1 ? 2 PHASIT phasing . ? 3 # _cell.entry_id 1BNZ _cell.length_a 47.600 _cell.length_b 50.770 _cell.length_c 42.060 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1BNZ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1BNZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_percent_sol 42.0 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'pH 6.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 287 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date 1997-05-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1BNZ _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 10 _reflns.d_resolution_high 1.9 _reflns.number_obs 7607 _reflns.number_all ? _reflns.percent_possible_obs 94.1 _reflns.pdbx_Rmerge_I_obs 0.0750000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 32.0 _reflns.pdbx_redundancy 3.0 _reflns.R_free_details ? _reflns.limit_k_min ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1BNZ _refine.ls_number_reflns_obs 5682 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 4.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs 76.0 _refine.ls_R_factor_obs 0.1680000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1680000 _refine.ls_R_factor_R_free 0.2680000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 510 _refine_hist.pdbx_number_atoms_nucleic_acid 322 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 99 _refine_hist.number_atoms_total 931 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.37 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM_NDBX_HIGH.DNA TOP_NDBX.DNA 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1BNZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1BNZ _struct.title 'SSO7D HYPERTHERMOPHILE PROTEIN/DNA COMPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1BNZ _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text 'PROTEIN-DNA INTERACTION, DNA BINDING PROTEIN-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP DN71_SULSOX 2 P80170 ? ? ? 2 PDB 1BNZ 1 1BNZ ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1BNZ A 2 ? 64 ? P80170 1 ? 63 ? 2 64 2 2 1BNZ B 1 ? 8 ? 1BNZ 66 ? 73 ? 66 73 3 2 1BNZ C 1 ? 8 ? 1BNZ 74 ? 81 ? 74 81 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1BNZ _struct_ref_seq_dif.mon_id GLU _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 14 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P80170 _struct_ref_seq_dif.db_mon_id GLN _struct_ref_seq_dif.pdbx_seq_db_seq_num 13 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 14 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE C 17 ? LYS C 19 ? ILE A 17 LYS A 19 5 ? 3 HELX_P HELX_P2 2 GLU C 48 ? ASP C 50 ? GLU A 48 ASP A 50 5 ? 3 HELX_P HELX_P3 3 LYS C 53 ? GLN C 62 ? LYS A 53 GLN A 62 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 8 N3 ? ? B DG 66 C DC 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 8 O2 ? ? B DG 66 C DC 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 8 N4 ? ? B DG 66 C DC 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 7 N1 ? ? B DT 67 C DA 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 7 N6 ? ? B DT 67 C DA 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 6 N3 ? ? B DA 68 C DT 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 6 O4 ? ? B DA 68 C DT 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 5 N3 ? ? B DA 69 C DT 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 5 O4 ? ? B DA 69 C DT 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 4 N1 ? ? B DT 70 C DA 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 4 N6 ? ? B DT 70 C DA 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 3 N1 ? ? B DT 71 C DA 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 3 N6 ? ? B DT 71 C DA 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 2 N3 ? ? B DA 72 C DT 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 2 O4 ? ? B DA 72 C DT 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 1 N1 ? ? B DC 73 C DG 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 1 O6 ? ? B DC 73 C DG 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 1 N2 ? ? B DC 73 C DG 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR C 3 ? TYR C 8 ? THR A 3 TYR A 8 A 2 GLU C 11 ? ASP C 16 ? GLU A 11 ASP A 16 B 1 ILE C 20 ? VAL C 26 ? ILE A 20 VAL A 26 B 2 MET C 29 ? ASP C 35 ? MET A 29 ASP A 35 B 3 THR C 41 ? SER C 47 ? THR A 41 SER A 47 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE C 6 ? N PHE A 6 O LYS C 13 ? O LYS A 13 B 1 2 N VAL C 26 ? N VAL A 26 O MET C 29 ? O MET A 29 B 2 3 N PHE C 32 ? N PHE A 32 O GLY C 44 ? O GLY A 44 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 2 ? ? 74.97 -144.32 2 1 LYS A 21 ? ? -96.01 -62.24 3 1 GLN A 62 ? ? -105.37 -86.10 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 DA OP3 O N N 57 DA P P N N 58 DA OP1 O N N 59 DA OP2 O N N 60 DA "O5'" O N N 61 DA "C5'" C N N 62 DA "C4'" C N R 63 DA "O4'" O N N 64 DA "C3'" C N S 65 DA "O3'" O N N 66 DA "C2'" C N N 67 DA "C1'" C N R 68 DA N9 N Y N 69 DA C8 C Y N 70 DA N7 N Y N 71 DA C5 C Y N 72 DA C6 C Y N 73 DA N6 N N N 74 DA N1 N Y N 75 DA C2 C Y N 76 DA N3 N Y N 77 DA C4 C Y N 78 DA HOP3 H N N 79 DA HOP2 H N N 80 DA "H5'" H N N 81 DA "H5''" H N N 82 DA "H4'" H N N 83 DA "H3'" H N N 84 DA "HO3'" H N N 85 DA "H2'" H N N 86 DA "H2''" H N N 87 DA "H1'" H N N 88 DA H8 H N N 89 DA H61 H N N 90 DA H62 H N N 91 DA H2 H N N 92 DC OP3 O N N 93 DC P P N N 94 DC OP1 O N N 95 DC OP2 O N N 96 DC "O5'" O N N 97 DC "C5'" C N N 98 DC "C4'" C N R 99 DC "O4'" O N N 100 DC "C3'" C N S 101 DC "O3'" O N N 102 DC "C2'" C N N 103 DC "C1'" C N R 104 DC N1 N N N 105 DC C2 C N N 106 DC O2 O N N 107 DC N3 N N N 108 DC C4 C N N 109 DC N4 N N N 110 DC C5 C N N 111 DC C6 C N N 112 DC HOP3 H N N 113 DC HOP2 H N N 114 DC "H5'" H N N 115 DC "H5''" H N N 116 DC "H4'" H N N 117 DC "H3'" H N N 118 DC "HO3'" H N N 119 DC "H2'" H N N 120 DC "H2''" H N N 121 DC "H1'" H N N 122 DC H41 H N N 123 DC H42 H N N 124 DC H5 H N N 125 DC H6 H N N 126 DG OP3 O N N 127 DG P P N N 128 DG OP1 O N N 129 DG OP2 O N N 130 DG "O5'" O N N 131 DG "C5'" C N N 132 DG "C4'" C N R 133 DG "O4'" O N N 134 DG "C3'" C N S 135 DG "O3'" O N N 136 DG "C2'" C N N 137 DG "C1'" C N R 138 DG N9 N Y N 139 DG C8 C Y N 140 DG N7 N Y N 141 DG C5 C Y N 142 DG C6 C N N 143 DG O6 O N N 144 DG N1 N N N 145 DG C2 C N N 146 DG N2 N N N 147 DG N3 N N N 148 DG C4 C Y N 149 DG HOP3 H N N 150 DG HOP2 H N N 151 DG "H5'" H N N 152 DG "H5''" H N N 153 DG "H4'" H N N 154 DG "H3'" H N N 155 DG "HO3'" H N N 156 DG "H2'" H N N 157 DG "H2''" H N N 158 DG "H1'" H N N 159 DG H8 H N N 160 DG H1 H N N 161 DG H21 H N N 162 DG H22 H N N 163 DT OP3 O N N 164 DT P P N N 165 DT OP1 O N N 166 DT OP2 O N N 167 DT "O5'" O N N 168 DT "C5'" C N N 169 DT "C4'" C N R 170 DT "O4'" O N N 171 DT "C3'" C N S 172 DT "O3'" O N N 173 DT "C2'" C N N 174 DT "C1'" C N R 175 DT N1 N N N 176 DT C2 C N N 177 DT O2 O N N 178 DT N3 N N N 179 DT C4 C N N 180 DT O4 O N N 181 DT C5 C N N 182 DT C7 C N N 183 DT C6 C N N 184 DT HOP3 H N N 185 DT HOP2 H N N 186 DT "H5'" H N N 187 DT "H5''" H N N 188 DT "H4'" H N N 189 DT "H3'" H N N 190 DT "HO3'" H N N 191 DT "H2'" H N N 192 DT "H2''" H N N 193 DT "H1'" H N N 194 DT H3 H N N 195 DT H71 H N N 196 DT H72 H N N 197 DT H73 H N N 198 DT H6 H N N 199 GLN N N N N 200 GLN CA C N S 201 GLN C C N N 202 GLN O O N N 203 GLN CB C N N 204 GLN CG C N N 205 GLN CD C N N 206 GLN OE1 O N N 207 GLN NE2 N N N 208 GLN OXT O N N 209 GLN H H N N 210 GLN H2 H N N 211 GLN HA H N N 212 GLN HB2 H N N 213 GLN HB3 H N N 214 GLN HG2 H N N 215 GLN HG3 H N N 216 GLN HE21 H N N 217 GLN HE22 H N N 218 GLN HXT H N N 219 GLU N N N N 220 GLU CA C N S 221 GLU C C N N 222 GLU O O N N 223 GLU CB C N N 224 GLU CG C N N 225 GLU CD C N N 226 GLU OE1 O N N 227 GLU OE2 O N N 228 GLU OXT O N N 229 GLU H H N N 230 GLU H2 H N N 231 GLU HA H N N 232 GLU HB2 H N N 233 GLU HB3 H N N 234 GLU HG2 H N N 235 GLU HG3 H N N 236 GLU HE2 H N N 237 GLU HXT H N N 238 GLY N N N N 239 GLY CA C N N 240 GLY C C N N 241 GLY O O N N 242 GLY OXT O N N 243 GLY H H N N 244 GLY H2 H N N 245 GLY HA2 H N N 246 GLY HA3 H N N 247 GLY HXT H N N 248 HOH O O N N 249 HOH H1 H N N 250 HOH H2 H N N 251 ILE N N N N 252 ILE CA C N S 253 ILE C C N N 254 ILE O O N N 255 ILE CB C N S 256 ILE CG1 C N N 257 ILE CG2 C N N 258 ILE CD1 C N N 259 ILE OXT O N N 260 ILE H H N N 261 ILE H2 H N N 262 ILE HA H N N 263 ILE HB H N N 264 ILE HG12 H N N 265 ILE HG13 H N N 266 ILE HG21 H N N 267 ILE HG22 H N N 268 ILE HG23 H N N 269 ILE HD11 H N N 270 ILE HD12 H N N 271 ILE HD13 H N N 272 ILE HXT H N N 273 LEU N N N N 274 LEU CA C N S 275 LEU C C N N 276 LEU O O N N 277 LEU CB C N N 278 LEU CG C N N 279 LEU CD1 C N N 280 LEU CD2 C N N 281 LEU OXT O N N 282 LEU H H N N 283 LEU H2 H N N 284 LEU HA H N N 285 LEU HB2 H N N 286 LEU HB3 H N N 287 LEU HG H N N 288 LEU HD11 H N N 289 LEU HD12 H N N 290 LEU HD13 H N N 291 LEU HD21 H N N 292 LEU HD22 H N N 293 LEU HD23 H N N 294 LEU HXT H N N 295 LYS N N N N 296 LYS CA C N S 297 LYS C C N N 298 LYS O O N N 299 LYS CB C N N 300 LYS CG C N N 301 LYS CD C N N 302 LYS CE C N N 303 LYS NZ N N N 304 LYS OXT O N N 305 LYS H H N N 306 LYS H2 H N N 307 LYS HA H N N 308 LYS HB2 H N N 309 LYS HB3 H N N 310 LYS HG2 H N N 311 LYS HG3 H N N 312 LYS HD2 H N N 313 LYS HD3 H N N 314 LYS HE2 H N N 315 LYS HE3 H N N 316 LYS HZ1 H N N 317 LYS HZ2 H N N 318 LYS HZ3 H N N 319 LYS HXT H N N 320 MET N N N N 321 MET CA C N S 322 MET C C N N 323 MET O O N N 324 MET CB C N N 325 MET CG C N N 326 MET SD S N N 327 MET CE C N N 328 MET OXT O N N 329 MET H H N N 330 MET H2 H N N 331 MET HA H N N 332 MET HB2 H N N 333 MET HB3 H N N 334 MET HG2 H N N 335 MET HG3 H N N 336 MET HE1 H N N 337 MET HE2 H N N 338 MET HE3 H N N 339 MET HXT H N N 340 PHE N N N N 341 PHE CA C N S 342 PHE C C N N 343 PHE O O N N 344 PHE CB C N N 345 PHE CG C Y N 346 PHE CD1 C Y N 347 PHE CD2 C Y N 348 PHE CE1 C Y N 349 PHE CE2 C Y N 350 PHE CZ C Y N 351 PHE OXT O N N 352 PHE H H N N 353 PHE H2 H N N 354 PHE HA H N N 355 PHE HB2 H N N 356 PHE HB3 H N N 357 PHE HD1 H N N 358 PHE HD2 H N N 359 PHE HE1 H N N 360 PHE HE2 H N N 361 PHE HZ H N N 362 PHE HXT H N N 363 PRO N N N N 364 PRO CA C N S 365 PRO C C N N 366 PRO O O N N 367 PRO CB C N N 368 PRO CG C N N 369 PRO CD C N N 370 PRO OXT O N N 371 PRO H H N N 372 PRO HA H N N 373 PRO HB2 H N N 374 PRO HB3 H N N 375 PRO HG2 H N N 376 PRO HG3 H N N 377 PRO HD2 H N N 378 PRO HD3 H N N 379 PRO HXT H N N 380 SER N N N N 381 SER CA C N S 382 SER C C N N 383 SER O O N N 384 SER CB C N N 385 SER OG O N N 386 SER OXT O N N 387 SER H H N N 388 SER H2 H N N 389 SER HA H N N 390 SER HB2 H N N 391 SER HB3 H N N 392 SER HG H N N 393 SER HXT H N N 394 THR N N N N 395 THR CA C N S 396 THR C C N N 397 THR O O N N 398 THR CB C N R 399 THR OG1 O N N 400 THR CG2 C N N 401 THR OXT O N N 402 THR H H N N 403 THR H2 H N N 404 THR HA H N N 405 THR HB H N N 406 THR HG1 H N N 407 THR HG21 H N N 408 THR HG22 H N N 409 THR HG23 H N N 410 THR HXT H N N 411 TRP N N N N 412 TRP CA C N S 413 TRP C C N N 414 TRP O O N N 415 TRP CB C N N 416 TRP CG C Y N 417 TRP CD1 C Y N 418 TRP CD2 C Y N 419 TRP NE1 N Y N 420 TRP CE2 C Y N 421 TRP CE3 C Y N 422 TRP CZ2 C Y N 423 TRP CZ3 C Y N 424 TRP CH2 C Y N 425 TRP OXT O N N 426 TRP H H N N 427 TRP H2 H N N 428 TRP HA H N N 429 TRP HB2 H N N 430 TRP HB3 H N N 431 TRP HD1 H N N 432 TRP HE1 H N N 433 TRP HE3 H N N 434 TRP HZ2 H N N 435 TRP HZ3 H N N 436 TRP HH2 H N N 437 TRP HXT H N N 438 TYR N N N N 439 TYR CA C N S 440 TYR C C N N 441 TYR O O N N 442 TYR CB C N N 443 TYR CG C Y N 444 TYR CD1 C Y N 445 TYR CD2 C Y N 446 TYR CE1 C Y N 447 TYR CE2 C Y N 448 TYR CZ C Y N 449 TYR OH O N N 450 TYR OXT O N N 451 TYR H H N N 452 TYR H2 H N N 453 TYR HA H N N 454 TYR HB2 H N N 455 TYR HB3 H N N 456 TYR HD1 H N N 457 TYR HD2 H N N 458 TYR HE1 H N N 459 TYR HE2 H N N 460 TYR HH H N N 461 TYR HXT H N N 462 VAL N N N N 463 VAL CA C N S 464 VAL C C N N 465 VAL O O N N 466 VAL CB C N N 467 VAL CG1 C N N 468 VAL CG2 C N N 469 VAL OXT O N N 470 VAL H H N N 471 VAL H2 H N N 472 VAL HA H N N 473 VAL HB H N N 474 VAL HG11 H N N 475 VAL HG12 H N N 476 VAL HG13 H N N 477 VAL HG21 H N N 478 VAL HG22 H N N 479 VAL HG23 H N N 480 VAL HXT H N N 481 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 DA OP3 P sing N N 54 DA OP3 HOP3 sing N N 55 DA P OP1 doub N N 56 DA P OP2 sing N N 57 DA P "O5'" sing N N 58 DA OP2 HOP2 sing N N 59 DA "O5'" "C5'" sing N N 60 DA "C5'" "C4'" sing N N 61 DA "C5'" "H5'" sing N N 62 DA "C5'" "H5''" sing N N 63 DA "C4'" "O4'" sing N N 64 DA "C4'" "C3'" sing N N 65 DA "C4'" "H4'" sing N N 66 DA "O4'" "C1'" sing N N 67 DA "C3'" "O3'" sing N N 68 DA "C3'" "C2'" sing N N 69 DA "C3'" "H3'" sing N N 70 DA "O3'" "HO3'" sing N N 71 DA "C2'" "C1'" sing N N 72 DA "C2'" "H2'" sing N N 73 DA "C2'" "H2''" sing N N 74 DA "C1'" N9 sing N N 75 DA "C1'" "H1'" sing N N 76 DA N9 C8 sing Y N 77 DA N9 C4 sing Y N 78 DA C8 N7 doub Y N 79 DA C8 H8 sing N N 80 DA N7 C5 sing Y N 81 DA C5 C6 sing Y N 82 DA C5 C4 doub Y N 83 DA C6 N6 sing N N 84 DA C6 N1 doub Y N 85 DA N6 H61 sing N N 86 DA N6 H62 sing N N 87 DA N1 C2 sing Y N 88 DA C2 N3 doub Y N 89 DA C2 H2 sing N N 90 DA N3 C4 sing Y N 91 DC OP3 P sing N N 92 DC OP3 HOP3 sing N N 93 DC P OP1 doub N N 94 DC P OP2 sing N N 95 DC P "O5'" sing N N 96 DC OP2 HOP2 sing N N 97 DC "O5'" "C5'" sing N N 98 DC "C5'" "C4'" sing N N 99 DC "C5'" "H5'" sing N N 100 DC "C5'" "H5''" sing N N 101 DC "C4'" "O4'" sing N N 102 DC "C4'" "C3'" sing N N 103 DC "C4'" "H4'" sing N N 104 DC "O4'" "C1'" sing N N 105 DC "C3'" "O3'" sing N N 106 DC "C3'" "C2'" sing N N 107 DC "C3'" "H3'" sing N N 108 DC "O3'" "HO3'" sing N N 109 DC "C2'" "C1'" sing N N 110 DC "C2'" "H2'" sing N N 111 DC "C2'" "H2''" sing N N 112 DC "C1'" N1 sing N N 113 DC "C1'" "H1'" sing N N 114 DC N1 C2 sing N N 115 DC N1 C6 sing N N 116 DC C2 O2 doub N N 117 DC C2 N3 sing N N 118 DC N3 C4 doub N N 119 DC C4 N4 sing N N 120 DC C4 C5 sing N N 121 DC N4 H41 sing N N 122 DC N4 H42 sing N N 123 DC C5 C6 doub N N 124 DC C5 H5 sing N N 125 DC C6 H6 sing N N 126 DG OP3 P sing N N 127 DG OP3 HOP3 sing N N 128 DG P OP1 doub N N 129 DG P OP2 sing N N 130 DG P "O5'" sing N N 131 DG OP2 HOP2 sing N N 132 DG "O5'" "C5'" sing N N 133 DG "C5'" "C4'" sing N N 134 DG "C5'" "H5'" sing N N 135 DG "C5'" "H5''" sing N N 136 DG "C4'" "O4'" sing N N 137 DG "C4'" "C3'" sing N N 138 DG "C4'" "H4'" sing N N 139 DG "O4'" "C1'" sing N N 140 DG "C3'" "O3'" sing N N 141 DG "C3'" "C2'" sing N N 142 DG "C3'" "H3'" sing N N 143 DG "O3'" "HO3'" sing N N 144 DG "C2'" "C1'" sing N N 145 DG "C2'" "H2'" sing N N 146 DG "C2'" "H2''" sing N N 147 DG "C1'" N9 sing N N 148 DG "C1'" "H1'" sing N N 149 DG N9 C8 sing Y N 150 DG N9 C4 sing Y N 151 DG C8 N7 doub Y N 152 DG C8 H8 sing N N 153 DG N7 C5 sing Y N 154 DG C5 C6 sing N N 155 DG C5 C4 doub Y N 156 DG C6 O6 doub N N 157 DG C6 N1 sing N N 158 DG N1 C2 sing N N 159 DG N1 H1 sing N N 160 DG C2 N2 sing N N 161 DG C2 N3 doub N N 162 DG N2 H21 sing N N 163 DG N2 H22 sing N N 164 DG N3 C4 sing N N 165 DT OP3 P sing N N 166 DT OP3 HOP3 sing N N 167 DT P OP1 doub N N 168 DT P OP2 sing N N 169 DT P "O5'" sing N N 170 DT OP2 HOP2 sing N N 171 DT "O5'" "C5'" sing N N 172 DT "C5'" "C4'" sing N N 173 DT "C5'" "H5'" sing N N 174 DT "C5'" "H5''" sing N N 175 DT "C4'" "O4'" sing N N 176 DT "C4'" "C3'" sing N N 177 DT "C4'" "H4'" sing N N 178 DT "O4'" "C1'" sing N N 179 DT "C3'" "O3'" sing N N 180 DT "C3'" "C2'" sing N N 181 DT "C3'" "H3'" sing N N 182 DT "O3'" "HO3'" sing N N 183 DT "C2'" "C1'" sing N N 184 DT "C2'" "H2'" sing N N 185 DT "C2'" "H2''" sing N N 186 DT "C1'" N1 sing N N 187 DT "C1'" "H1'" sing N N 188 DT N1 C2 sing N N 189 DT N1 C6 sing N N 190 DT C2 O2 doub N N 191 DT C2 N3 sing N N 192 DT N3 C4 sing N N 193 DT N3 H3 sing N N 194 DT C4 O4 doub N N 195 DT C4 C5 sing N N 196 DT C5 C7 sing N N 197 DT C5 C6 doub N N 198 DT C7 H71 sing N N 199 DT C7 H72 sing N N 200 DT C7 H73 sing N N 201 DT C6 H6 sing N N 202 GLN N CA sing N N 203 GLN N H sing N N 204 GLN N H2 sing N N 205 GLN CA C sing N N 206 GLN CA CB sing N N 207 GLN CA HA sing N N 208 GLN C O doub N N 209 GLN C OXT sing N N 210 GLN CB CG sing N N 211 GLN CB HB2 sing N N 212 GLN CB HB3 sing N N 213 GLN CG CD sing N N 214 GLN CG HG2 sing N N 215 GLN CG HG3 sing N N 216 GLN CD OE1 doub N N 217 GLN CD NE2 sing N N 218 GLN NE2 HE21 sing N N 219 GLN NE2 HE22 sing N N 220 GLN OXT HXT sing N N 221 GLU N CA sing N N 222 GLU N H sing N N 223 GLU N H2 sing N N 224 GLU CA C sing N N 225 GLU CA CB sing N N 226 GLU CA HA sing N N 227 GLU C O doub N N 228 GLU C OXT sing N N 229 GLU CB CG sing N N 230 GLU CB HB2 sing N N 231 GLU CB HB3 sing N N 232 GLU CG CD sing N N 233 GLU CG HG2 sing N N 234 GLU CG HG3 sing N N 235 GLU CD OE1 doub N N 236 GLU CD OE2 sing N N 237 GLU OE2 HE2 sing N N 238 GLU OXT HXT sing N N 239 GLY N CA sing N N 240 GLY N H sing N N 241 GLY N H2 sing N N 242 GLY CA C sing N N 243 GLY CA HA2 sing N N 244 GLY CA HA3 sing N N 245 GLY C O doub N N 246 GLY C OXT sing N N 247 GLY OXT HXT sing N N 248 HOH O H1 sing N N 249 HOH O H2 sing N N 250 ILE N CA sing N N 251 ILE N H sing N N 252 ILE N H2 sing N N 253 ILE CA C sing N N 254 ILE CA CB sing N N 255 ILE CA HA sing N N 256 ILE C O doub N N 257 ILE C OXT sing N N 258 ILE CB CG1 sing N N 259 ILE CB CG2 sing N N 260 ILE CB HB sing N N 261 ILE CG1 CD1 sing N N 262 ILE CG1 HG12 sing N N 263 ILE CG1 HG13 sing N N 264 ILE CG2 HG21 sing N N 265 ILE CG2 HG22 sing N N 266 ILE CG2 HG23 sing N N 267 ILE CD1 HD11 sing N N 268 ILE CD1 HD12 sing N N 269 ILE CD1 HD13 sing N N 270 ILE OXT HXT sing N N 271 LEU N CA sing N N 272 LEU N H sing N N 273 LEU N H2 sing N N 274 LEU CA C sing N N 275 LEU CA CB sing N N 276 LEU CA HA sing N N 277 LEU C O doub N N 278 LEU C OXT sing N N 279 LEU CB CG sing N N 280 LEU CB HB2 sing N N 281 LEU CB HB3 sing N N 282 LEU CG CD1 sing N N 283 LEU CG CD2 sing N N 284 LEU CG HG sing N N 285 LEU CD1 HD11 sing N N 286 LEU CD1 HD12 sing N N 287 LEU CD1 HD13 sing N N 288 LEU CD2 HD21 sing N N 289 LEU CD2 HD22 sing N N 290 LEU CD2 HD23 sing N N 291 LEU OXT HXT sing N N 292 LYS N CA sing N N 293 LYS N H sing N N 294 LYS N H2 sing N N 295 LYS CA C sing N N 296 LYS CA CB sing N N 297 LYS CA HA sing N N 298 LYS C O doub N N 299 LYS C OXT sing N N 300 LYS CB CG sing N N 301 LYS CB HB2 sing N N 302 LYS CB HB3 sing N N 303 LYS CG CD sing N N 304 LYS CG HG2 sing N N 305 LYS CG HG3 sing N N 306 LYS CD CE sing N N 307 LYS CD HD2 sing N N 308 LYS CD HD3 sing N N 309 LYS CE NZ sing N N 310 LYS CE HE2 sing N N 311 LYS CE HE3 sing N N 312 LYS NZ HZ1 sing N N 313 LYS NZ HZ2 sing N N 314 LYS NZ HZ3 sing N N 315 LYS OXT HXT sing N N 316 MET N CA sing N N 317 MET N H sing N N 318 MET N H2 sing N N 319 MET CA C sing N N 320 MET CA CB sing N N 321 MET CA HA sing N N 322 MET C O doub N N 323 MET C OXT sing N N 324 MET CB CG sing N N 325 MET CB HB2 sing N N 326 MET CB HB3 sing N N 327 MET CG SD sing N N 328 MET CG HG2 sing N N 329 MET CG HG3 sing N N 330 MET SD CE sing N N 331 MET CE HE1 sing N N 332 MET CE HE2 sing N N 333 MET CE HE3 sing N N 334 MET OXT HXT sing N N 335 PHE N CA sing N N 336 PHE N H sing N N 337 PHE N H2 sing N N 338 PHE CA C sing N N 339 PHE CA CB sing N N 340 PHE CA HA sing N N 341 PHE C O doub N N 342 PHE C OXT sing N N 343 PHE CB CG sing N N 344 PHE CB HB2 sing N N 345 PHE CB HB3 sing N N 346 PHE CG CD1 doub Y N 347 PHE CG CD2 sing Y N 348 PHE CD1 CE1 sing Y N 349 PHE CD1 HD1 sing N N 350 PHE CD2 CE2 doub Y N 351 PHE CD2 HD2 sing N N 352 PHE CE1 CZ doub Y N 353 PHE CE1 HE1 sing N N 354 PHE CE2 CZ sing Y N 355 PHE CE2 HE2 sing N N 356 PHE CZ HZ sing N N 357 PHE OXT HXT sing N N 358 PRO N CA sing N N 359 PRO N CD sing N N 360 PRO N H sing N N 361 PRO CA C sing N N 362 PRO CA CB sing N N 363 PRO CA HA sing N N 364 PRO C O doub N N 365 PRO C OXT sing N N 366 PRO CB CG sing N N 367 PRO CB HB2 sing N N 368 PRO CB HB3 sing N N 369 PRO CG CD sing N N 370 PRO CG HG2 sing N N 371 PRO CG HG3 sing N N 372 PRO CD HD2 sing N N 373 PRO CD HD3 sing N N 374 PRO OXT HXT sing N N 375 SER N CA sing N N 376 SER N H sing N N 377 SER N H2 sing N N 378 SER CA C sing N N 379 SER CA CB sing N N 380 SER CA HA sing N N 381 SER C O doub N N 382 SER C OXT sing N N 383 SER CB OG sing N N 384 SER CB HB2 sing N N 385 SER CB HB3 sing N N 386 SER OG HG sing N N 387 SER OXT HXT sing N N 388 THR N CA sing N N 389 THR N H sing N N 390 THR N H2 sing N N 391 THR CA C sing N N 392 THR CA CB sing N N 393 THR CA HA sing N N 394 THR C O doub N N 395 THR C OXT sing N N 396 THR CB OG1 sing N N 397 THR CB CG2 sing N N 398 THR CB HB sing N N 399 THR OG1 HG1 sing N N 400 THR CG2 HG21 sing N N 401 THR CG2 HG22 sing N N 402 THR CG2 HG23 sing N N 403 THR OXT HXT sing N N 404 TRP N CA sing N N 405 TRP N H sing N N 406 TRP N H2 sing N N 407 TRP CA C sing N N 408 TRP CA CB sing N N 409 TRP CA HA sing N N 410 TRP C O doub N N 411 TRP C OXT sing N N 412 TRP CB CG sing N N 413 TRP CB HB2 sing N N 414 TRP CB HB3 sing N N 415 TRP CG CD1 doub Y N 416 TRP CG CD2 sing Y N 417 TRP CD1 NE1 sing Y N 418 TRP CD1 HD1 sing N N 419 TRP CD2 CE2 doub Y N 420 TRP CD2 CE3 sing Y N 421 TRP NE1 CE2 sing Y N 422 TRP NE1 HE1 sing N N 423 TRP CE2 CZ2 sing Y N 424 TRP CE3 CZ3 doub Y N 425 TRP CE3 HE3 sing N N 426 TRP CZ2 CH2 doub Y N 427 TRP CZ2 HZ2 sing N N 428 TRP CZ3 CH2 sing Y N 429 TRP CZ3 HZ3 sing N N 430 TRP CH2 HH2 sing N N 431 TRP OXT HXT sing N N 432 TYR N CA sing N N 433 TYR N H sing N N 434 TYR N H2 sing N N 435 TYR CA C sing N N 436 TYR CA CB sing N N 437 TYR CA HA sing N N 438 TYR C O doub N N 439 TYR C OXT sing N N 440 TYR CB CG sing N N 441 TYR CB HB2 sing N N 442 TYR CB HB3 sing N N 443 TYR CG CD1 doub Y N 444 TYR CG CD2 sing Y N 445 TYR CD1 CE1 sing Y N 446 TYR CD1 HD1 sing N N 447 TYR CD2 CE2 doub Y N 448 TYR CD2 HD2 sing N N 449 TYR CE1 CZ doub Y N 450 TYR CE1 HE1 sing N N 451 TYR CE2 CZ sing Y N 452 TYR CE2 HE2 sing N N 453 TYR CZ OH sing N N 454 TYR OH HH sing N N 455 TYR OXT HXT sing N N 456 VAL N CA sing N N 457 VAL N H sing N N 458 VAL N H2 sing N N 459 VAL CA C sing N N 460 VAL CA CB sing N N 461 VAL CA HA sing N N 462 VAL C O doub N N 463 VAL C OXT sing N N 464 VAL CB CG1 sing N N 465 VAL CB CG2 sing N N 466 VAL CB HB sing N N 467 VAL CG1 HG11 sing N N 468 VAL CG1 HG12 sing N N 469 VAL CG1 HG13 sing N N 470 VAL CG2 HG21 sing N N 471 VAL CG2 HG22 sing N N 472 VAL CG2 HG23 sing N N 473 VAL OXT HXT sing N N 474 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1BNZ 'double helix' 1BNZ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 8 1_555 -0.431 0.004 0.023 -4.937 -0.869 1.894 1 B_DG66:DC81_C B 66 ? C 81 ? 19 1 1 A DT 2 1_555 B DA 7 1_555 -0.145 -0.170 -0.078 6.467 -2.133 2.064 2 B_DT67:DA80_C B 67 ? C 80 ? 20 1 1 A DA 3 1_555 B DT 6 1_555 0.048 -0.288 0.361 20.316 -8.574 -3.251 3 B_DA68:DT79_C B 68 ? C 79 ? 20 1 1 A DA 4 1_555 B DT 5 1_555 0.103 0.109 0.168 -20.326 10.130 -3.909 4 B_DA69:DT78_C B 69 ? C 78 ? 20 1 1 A DT 5 1_555 B DA 4 1_555 -0.081 -0.120 -0.066 4.450 -7.485 1.682 5 B_DT70:DA77_C B 70 ? C 77 ? 20 1 1 A DT 6 1_555 B DA 3 1_555 -0.090 -0.126 0.084 -0.893 -15.288 1.324 6 B_DT71:DA76_C B 71 ? C 76 ? 20 1 1 A DA 7 1_555 B DT 2 1_555 -0.405 -0.389 0.176 5.977 -7.726 0.928 7 B_DA72:DT75_C B 72 ? C 75 ? 20 1 1 A DC 8 1_555 B DG 1 1_555 -0.039 -0.015 -0.345 11.927 -5.135 2.691 8 B_DC73:DG74_C B 73 ? C 74 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 8 1_555 A DT 2 1_555 B DA 7 1_555 -0.203 -0.420 3.149 0.713 1.737 28.370 -1.238 0.570 3.112 3.539 -1.453 28.431 1 BB_DG66DT67:DA80DC81_CC B 66 ? C 81 ? B 67 ? C 80 ? 1 A DT 2 1_555 B DA 7 1_555 A DA 3 1_555 B DT 6 1_555 -0.147 0.252 3.191 -1.922 3.816 25.662 -0.470 -0.193 3.196 8.516 4.289 26.010 2 BB_DT67DA68:DT79DA80_CC B 67 ? C 80 ? B 68 ? C 79 ? 1 A DA 3 1_555 B DT 6 1_555 A DA 4 1_555 B DT 5 1_555 0.146 0.952 5.928 -2.374 54.144 27.564 -4.736 -0.394 3.643 64.972 2.849 60.326 3 BB_DA68DA69:DT78DT79_CC B 68 ? C 79 ? B 69 ? C 78 ? 1 A DA 4 1_555 B DT 5 1_555 A DT 5 1_555 B DA 4 1_555 0.390 -0.308 2.950 -0.335 8.927 20.662 -3.694 -1.109 2.586 23.521 0.883 22.491 4 BB_DA69DT70:DA77DT78_CC B 69 ? C 78 ? B 70 ? C 77 ? 1 A DT 5 1_555 B DA 4 1_555 A DT 6 1_555 B DA 3 1_555 0.031 -0.520 3.533 0.282 2.095 30.804 -1.415 0.001 3.491 3.939 -0.529 30.875 5 BB_DT70DT71:DA76DA77_CC B 70 ? C 77 ? B 71 ? C 76 ? 1 A DT 6 1_555 B DA 3 1_555 A DA 7 1_555 B DT 2 1_555 -0.200 0.734 3.269 -1.342 4.035 37.107 0.607 0.132 3.332 6.315 2.100 37.342 6 BB_DT71DA72:DT75DA76_CC B 71 ? C 76 ? B 72 ? C 75 ? 1 A DA 7 1_555 B DT 2 1_555 A DC 8 1_555 B DG 1 1_555 0.220 -0.278 3.243 4.435 2.516 29.103 -1.077 0.503 3.206 4.959 -8.740 29.537 7 BB_DA72DC73:DG74DT75_CC B 72 ? C 75 ? B 73 ? C 74 ? # _atom_sites.entry_id 1BNZ _atom_sites.fract_transf_matrix[1][1] 0.021008 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019697 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023775 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_