HEADER IMMUNOGLOBULIN 19-JUL-95 1BRE TITLE IMMUNOGLOBULIN LIGHT CHAIN PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BENCE-JONES KAPPA I PROTEIN BRE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: BENCE-JONES; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CDNA (GENBANK ACCESSION CODE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HB101; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PCZ11; SOURCE 10 EXPRESSION_SYSTEM_GENE: CDNA (GENBANK ACCESSION CODE SOURCE 11 U31344); SOURCE 12 OTHER_DETAILS: PATIENT BRE KEYWDS IMMUNOGLOBULIN EXPDTA X-RAY DIFFRACTION AUTHOR N.SCHORMANN,M.D.BENSON REVDAT 2 24-FEB-09 1BRE 1 VERSN REVDAT 1 15-OCT-95 1BRE 0 JRNL AUTH N.SCHORMANN,J.R.MURRELL,J.J.LIEPNIEKS,M.D.BENSON JRNL TITL TERTIARY STRUCTURE OF AN AMYLOID IMMUNOGLOBULIN JRNL TITL 2 LIGHT CHAIN PROTEIN: A PROPOSED MODEL FOR AMYLOID JRNL TITL 3 FIBRIL FORMATION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 92 9490 1995 JRNL REFN ISSN 0027-8424 JRNL PMID 7568160 JRNL DOI 10.1073/PNAS.92.21.9490 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 5.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 57.0 REMARK 3 NUMBER OF REFLECTIONS : 32373 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.337 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4974 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 35 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.013 REMARK 3 BOND ANGLES (DEGREES) : 2.10 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : 1.70 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1BRE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JAN-94 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IIC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42843 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 71.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 47.2 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR 3.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.86500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MTRIX REMARK 300 THE TRANSFORMATIONS PRESENTED ON MTRIX RECORDS BELOW REMARK 300 DESCRIBE NON-CRYSTALLOGRAPHIC RELATIONSHIPS AMONG THE REMARK 300 VARIOUS DOMAINS IN THIS ENTRY. APPLYING THE APPROPRIATE REMARK 300 MTRIX TRANSFORMATION TO THE RESIDUES LISTED FIRST WILL REMARK 300 YIELD APPROXIMATE COORDINATES FOR THE RESIDUES LISTED REMARK 300 SECOND. REMARK 300 REMARK 300 APPLIED TO TRANSFORMED TO REMARK 300 MTRIX RESIDUES RESIDUES RMSD REMARK 300 M1 B 1 .. B 107 A 1 .. A 107 0.600 REMARK 300 MONOMER 2 TO MONOMER 1 (DIMER 1) REMARK 300 REMARK 300 M2 D 1 .. D 107 C 1 .. C 107 0.729 REMARK 300 MONOMER 4 TO MONOMER 3 (DIMER 2) REMARK 300 REMARK 300 M3 F 1 .. F 107 E 1 .. E 107 0.658 REMARK 300 MONOMER 6 TO MONOMER 5 (DIMER 3) REMARK 300 REMARK 300 M4 C 1 .. C 107 A 1 .. A 107 0.719 REMARK 300 M4 D 1 .. D 107 B 1 .. B 107 0.761 REMARK 300 DIMER 2 TO DIMER 1 REMARK 300 REMARK 300 M5 E 1 .. E 107 A 1 .. A 107 0.576 REMARK 300 M5 F 1 .. F 107 B 1 .. B 107 0.719 REMARK 300 DIMER 3 TO DIMER 1 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 41.25214 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 38.86500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 71.22313 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 108 REMARK 465 ARG B 108 REMARK 465 ARG C 108 REMARK 465 ARG D 108 REMARK 465 ARG E 108 REMARK 465 ARG F 108 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY C 66 N - CA - C ANGL. DEV. = -16.0 DEGREES REMARK 500 ILE C 75 N - CA - C ANGL. DEV. = -20.0 DEGREES REMARK 500 CYS C 88 CA - CB - SG ANGL. DEV. = 7.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 13 143.63 178.90 REMARK 500 ARG A 18 98.00 -60.00 REMARK 500 SER A 30 45.09 39.88 REMARK 500 LEU A 40 73.31 -57.37 REMARK 500 ASP A 50 80.54 61.41 REMARK 500 ALA A 51 -78.30 50.67 REMARK 500 ALA A 84 -147.08 -172.34 REMARK 500 SER B 30 -104.56 57.70 REMARK 500 LEU B 40 108.94 -45.57 REMARK 500 TYR B 49 -152.08 -123.94 REMARK 500 ASP B 50 56.19 14.64 REMARK 500 ALA B 51 -26.53 60.65 REMARK 500 SER B 52 -3.61 -150.85 REMARK 500 THR B 56 91.53 -59.75 REMARK 500 TYR B 91 36.83 -97.86 REMARK 500 TYR B 96 109.56 -46.38 REMARK 500 PRO C 8 -156.76 -87.05 REMARK 500 ALA C 13 156.69 172.47 REMARK 500 SER C 14 40.03 -102.09 REMARK 500 VAL C 15 122.73 59.53 REMARK 500 ASP C 17 -143.68 -59.61 REMARK 500 SER C 30 -109.40 51.28 REMARK 500 ASP C 31 28.03 -156.56 REMARK 500 ALA C 51 -44.01 76.31 REMARK 500 SER C 65 -170.83 172.07 REMARK 500 SER C 67 167.08 176.44 REMARK 500 THR C 69 -36.83 -132.50 REMARK 500 SER C 77 98.48 126.43 REMARK 500 ALA C 84 -169.81 174.99 REMARK 500 SER D 9 -88.34 -69.66 REMARK 500 LEU D 11 104.18 -171.20 REMARK 500 ILE D 29 50.31 -115.76 REMARK 500 SER D 30 88.70 -31.54 REMARK 500 ASP D 31 -6.79 69.28 REMARK 500 LEU D 47 -46.22 -141.02 REMARK 500 ALA D 51 -42.07 87.89 REMARK 500 THR D 56 87.00 -56.23 REMARK 500 PRO D 59 156.65 -48.67 REMARK 500 THR D 69 -41.86 -130.54 REMARK 500 PRO D 80 -30.48 -32.18 REMARK 500 ASP D 82 2.47 -66.24 REMARK 500 ALA D 84 -154.96 -169.96 REMARK 500 VAL E 15 71.05 -58.35 REMARK 500 ASP E 28 105.12 -54.76 REMARK 500 SER E 30 -92.60 71.87 REMARK 500 ASP E 31 14.77 -145.91 REMARK 500 GLN E 38 79.73 -108.68 REMARK 500 LEU E 40 87.55 -23.53 REMARK 500 ASP E 50 76.31 55.63 REMARK 500 ALA E 51 -55.24 45.97 REMARK 500 LYS E 103 87.69 -68.33 REMARK 500 ILE E 106 -169.76 -79.30 REMARK 500 ILE F 29 -5.22 -172.05 REMARK 500 SER F 30 -80.11 73.37 REMARK 500 ASP F 31 16.77 -161.99 REMARK 500 LEU F 40 -74.88 -18.43 REMARK 500 LEU F 47 -71.47 -91.13 REMARK 500 ALA F 51 -80.62 68.99 REMARK 500 GLU F 55 157.81 -44.19 REMARK 500 VAL F 58 122.91 -39.16 REMARK 500 SER F 67 55.21 -155.69 REMARK 500 ALA F 84 -148.66 -163.31 REMARK 500 TYR F 91 45.48 -102.91 REMARK 500 ASP F 92 -64.69 -91.90 REMARK 500 GLN F 100 -78.32 -57.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR B 36 0.08 SIDE_CHAIN REMARK 500 TYR C 91 0.07 SIDE_CHAIN REMARK 500 TYR E 86 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 SER A 52 24.0 L L OUTSIDE RANGE REMARK 500 VAL C 15 23.9 L L OUTSIDE RANGE REMARK 500 ARG C 18 24.8 L L OUTSIDE RANGE REMARK 500 LEU F 54 24.6 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 243 DISTANCE = 5.65 ANGSTROMS DBREF 1BRE A 1 108 PIR I39154 I39154 1 108 DBREF 1BRE B 1 108 PIR I39154 I39154 1 108 DBREF 1BRE C 1 108 PIR I39154 I39154 1 108 DBREF 1BRE D 1 108 PIR I39154 I39154 1 108 DBREF 1BRE E 1 108 PIR I39154 I39154 1 108 DBREF 1BRE F 1 108 PIR I39154 I39154 1 108 SEQRES 1 A 108 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 A 108 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 A 108 GLN ASP ILE SER ASP TYR LEU ILE TRP TYR GLN GLN LYS SEQRES 4 A 108 LEU GLY LYS ALA PRO ASN LEU LEU ILE TYR ASP ALA SER SEQRES 5 A 108 THR LEU GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 A 108 GLY SER GLY THR GLU TYR THR PHE THR ILE SER SER LEU SEQRES 7 A 108 GLN PRO GLU ASP ILE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 A 108 ASP ASP LEU PRO TYR THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 A 108 GLU ILE LYS ARG SEQRES 1 B 108 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 B 108 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 B 108 GLN ASP ILE SER ASP TYR LEU ILE TRP TYR GLN GLN LYS SEQRES 4 B 108 LEU GLY LYS ALA PRO ASN LEU LEU ILE TYR ASP ALA SER SEQRES 5 B 108 THR LEU GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 B 108 GLY SER GLY THR GLU TYR THR PHE THR ILE SER SER LEU SEQRES 7 B 108 GLN PRO GLU ASP ILE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 B 108 ASP ASP LEU PRO TYR THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 B 108 GLU ILE LYS ARG SEQRES 1 C 108 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 C 108 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 C 108 GLN ASP ILE SER ASP TYR LEU ILE TRP TYR GLN GLN LYS SEQRES 4 C 108 LEU GLY LYS ALA PRO ASN LEU LEU ILE TYR ASP ALA SER SEQRES 5 C 108 THR LEU GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 C 108 GLY SER GLY THR GLU TYR THR PHE THR ILE SER SER LEU SEQRES 7 C 108 GLN PRO GLU ASP ILE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 C 108 ASP ASP LEU PRO TYR THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 C 108 GLU ILE LYS ARG SEQRES 1 D 108 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 D 108 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 D 108 GLN ASP ILE SER ASP TYR LEU ILE TRP TYR GLN GLN LYS SEQRES 4 D 108 LEU GLY LYS ALA PRO ASN LEU LEU ILE TYR ASP ALA SER SEQRES 5 D 108 THR LEU GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 D 108 GLY SER GLY THR GLU TYR THR PHE THR ILE SER SER LEU SEQRES 7 D 108 GLN PRO GLU ASP ILE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 D 108 ASP ASP LEU PRO TYR THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 D 108 GLU ILE LYS ARG SEQRES 1 E 108 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 E 108 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 E 108 GLN ASP ILE SER ASP TYR LEU ILE TRP TYR GLN GLN LYS SEQRES 4 E 108 LEU GLY LYS ALA PRO ASN LEU LEU ILE TYR ASP ALA SER SEQRES 5 E 108 THR LEU GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 E 108 GLY SER GLY THR GLU TYR THR PHE THR ILE SER SER LEU SEQRES 7 E 108 GLN PRO GLU ASP ILE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 E 108 ASP ASP LEU PRO TYR THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 E 108 GLU ILE LYS ARG SEQRES 1 F 108 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 F 108 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 F 108 GLN ASP ILE SER ASP TYR LEU ILE TRP TYR GLN GLN LYS SEQRES 4 F 108 LEU GLY LYS ALA PRO ASN LEU LEU ILE TYR ASP ALA SER SEQRES 5 F 108 THR LEU GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 F 108 GLY SER GLY THR GLU TYR THR PHE THR ILE SER SER LEU SEQRES 7 F 108 GLN PRO GLU ASP ILE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 F 108 ASP ASP LEU PRO TYR THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 F 108 GLU ILE LYS ARG FORMUL 7 HOH *35(H2 O) HELIX 1 1 PRO A 80 ASP A 82 5 3 HELIX 2 2 PRO B 80 ASP B 82 5 3 HELIX 3 3 PRO C 80 ASP C 82 5 3 HELIX 4 4 PRO D 80 ASP D 82 5 3 HELIX 5 5 PRO E 80 ASP E 82 5 3 SHEET 1 A 4 MET A 4 SER A 7 0 SHEET 2 A 4 VAL A 19 ALA A 25 -1 N GLN A 24 O THR A 5 SHEET 3 A 4 GLU A 70 ILE A 75 -1 N ILE A 75 O VAL A 19 SHEET 4 A 4 PHE A 62 SER A 67 -1 N SER A 67 O GLU A 70 SHEET 1 B 5 SER A 10 ALA A 13 0 SHEET 2 B 5 THR A 102 ILE A 106 1 N LYS A 103 O LEU A 11 SHEET 3 B 5 ALA A 84 GLN A 90 -1 N TYR A 86 O THR A 102 SHEET 4 B 5 LEU A 33 GLN A 37 -1 N TYR A 36 O TYR A 87 SHEET 5 B 5 ASN A 45 ILE A 48 -1 N ILE A 48 O TRP A 35 SHEET 1 C 4 MET B 4 SER B 7 0 SHEET 2 C 4 VAL B 19 ALA B 25 -1 N GLN B 24 O THR B 5 SHEET 3 C 4 GLU B 70 ILE B 75 -1 N ILE B 75 O VAL B 19 SHEET 4 C 4 PHE B 62 SER B 65 -1 N SER B 65 O THR B 72 SHEET 1 D 2 SER B 10 SER B 14 0 SHEET 2 D 2 LYS B 103 LYS B 107 1 N LYS B 103 O LEU B 11 SHEET 1 E 3 THR B 85 GLN B 89 0 SHEET 2 E 3 ILE B 34 GLN B 38 -1 N GLN B 38 O THR B 85 SHEET 3 E 3 ASN B 45 ILE B 48 -1 N ILE B 48 O TRP B 35 SHEET 1 F 4 MET C 4 SER C 7 0 SHEET 2 F 4 ARG C 18 ALA C 25 -1 N GLN C 24 O THR C 5 SHEET 3 F 4 GLU C 70 SER C 76 -1 N ILE C 75 O VAL C 19 SHEET 4 F 4 PHE C 62 SER C 67 -1 N SER C 67 O GLU C 70 SHEET 1 G 4 THR C 102 VAL C 104 0 SHEET 2 G 4 ALA C 84 CYS C 88 -1 N TYR C 86 O THR C 102 SHEET 3 G 4 ILE C 34 GLN C 38 -1 N GLN C 38 O THR C 85 SHEET 4 G 4 ASN C 45 TYR C 49 -1 N ILE C 48 O TRP C 35 SHEET 1 H 4 MET D 4 SER D 7 0 SHEET 2 H 4 VAL D 19 ALA D 25 -1 N GLN D 24 O THR D 5 SHEET 3 H 4 GLU D 70 ILE D 75 -1 N ILE D 75 O VAL D 19 SHEET 4 H 4 PHE D 62 SER D 67 -1 N SER D 67 O GLU D 70 SHEET 1 I 5 SER D 10 ALA D 13 0 SHEET 2 I 5 THR D 102 ILE D 106 1 N LYS D 103 O LEU D 11 SHEET 3 I 5 ALA D 84 GLN D 90 -1 N TYR D 86 O THR D 102 SHEET 4 I 5 LEU D 33 GLN D 38 -1 N GLN D 38 O THR D 85 SHEET 5 I 5 ASN D 45 ILE D 48 -1 N ILE D 48 O TRP D 35 SHEET 1 J 4 MET E 4 SER E 7 0 SHEET 2 J 4 VAL E 19 ALA E 25 -1 N GLN E 24 O THR E 5 SHEET 3 J 4 GLU E 70 ILE E 75 -1 N ILE E 75 O VAL E 19 SHEET 4 J 4 PHE E 62 SER E 67 -1 N SER E 67 O GLU E 70 SHEET 1 K 2 SER E 10 SER E 12 0 SHEET 2 K 2 LYS E 103 GLU E 105 1 N LYS E 103 O LEU E 11 SHEET 1 L 3 THR E 85 GLN E 90 0 SHEET 2 L 3 LEU E 33 GLN E 38 -1 N GLN E 38 O THR E 85 SHEET 3 L 3 ASN E 45 TYR E 49 -1 N ILE E 48 O TRP E 35 SHEET 1 M 4 THR F 5 SER F 7 0 SHEET 2 M 4 VAL F 19 GLN F 24 -1 N GLN F 24 O THR F 5 SHEET 3 M 4 GLU F 70 ILE F 75 -1 N ILE F 75 O VAL F 19 SHEET 4 M 4 PHE F 62 GLY F 66 -1 N SER F 65 O THR F 72 SHEET 1 N 5 SER F 10 SER F 14 0 SHEET 2 N 5 THR F 102 LYS F 107 1 N LYS F 103 O LEU F 11 SHEET 3 N 5 ALA F 84 GLN F 90 -1 N TYR F 86 O THR F 102 SHEET 4 N 5 LEU F 33 GLN F 38 -1 N GLN F 38 O THR F 85 SHEET 5 N 5 LEU F 46 TYR F 49 -1 N ILE F 48 O TRP F 35 SSBOND 1 CYS A 23 CYS A 88 1555 1555 2.02 SSBOND 2 CYS B 23 CYS B 88 1555 1555 2.03 SSBOND 3 CYS C 23 CYS C 88 1555 1555 2.02 SSBOND 4 CYS D 23 CYS D 88 1555 1555 2.02 SSBOND 5 CYS E 23 CYS E 88 1555 1555 2.04 SSBOND 6 CYS F 23 CYS F 88 1555 1555 2.04 CISPEP 1 SER A 7 PRO A 8 0 0.03 CISPEP 2 LEU A 94 PRO A 95 0 0.17 CISPEP 3 SER B 7 PRO B 8 0 -0.55 CISPEP 4 LEU B 94 PRO B 95 0 0.32 CISPEP 5 SER C 7 PRO C 8 0 -0.48 CISPEP 6 LEU C 94 PRO C 95 0 0.05 CISPEP 7 SER D 7 PRO D 8 0 -0.22 CISPEP 8 LEU D 94 PRO D 95 0 -0.35 CISPEP 9 SER E 7 PRO E 8 0 -0.11 CISPEP 10 LEU E 94 PRO E 95 0 -0.31 CISPEP 11 SER F 7 PRO F 8 0 0.47 CISPEP 12 LEU F 94 PRO F 95 0 -0.34 CRYST1 82.290 77.730 82.200 90.00 119.95 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012152 0.000000 0.007002 0.00000 SCALE2 0.000000 0.012865 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014040 0.00000 MTRIX1 1 -0.467000 -0.003000 0.884000 -2.46000 1 MTRIX2 1 0.004000 -1.000000 -0.002000 31.50000 1 MTRIX3 1 0.884000 0.002000 0.467000 1.40000 1 MTRIX1 2 -0.503000 -0.010000 -0.864000 61.78000 1 MTRIX2 2 -0.002000 -1.000000 -0.011000 6.59000 1 MTRIX3 2 -0.864000 -0.004000 0.503000 35.28000 1 MTRIX1 3 1.000000 -0.001000 0.017000 -0.69000 1 MTRIX2 3 -0.001000 -1.000000 -0.006000 -19.97000 1 MTRIX3 3 0.017000 0.006000 -1.000000 71.64000 1 MTRIX1 4 0.489000 0.010000 0.872000 -20.98000 1 MTRIX2 4 -0.007000 1.000000 -0.008000 13.41000 1 MTRIX3 4 -0.872000 -0.002000 0.489000 36.43000 1 MTRIX1 5 -0.527000 0.019000 0.850000 0.38000 1 MTRIX2 5 0.005000 1.000000 -0.019000 26.64000 1 MTRIX3 5 -0.850000 -0.006000 -0.527000 72.57000 1