HEADER HYDROLASE 28-AUG-98 1BSN TITLE SOLUTION STRUCTURE OF THE EPSILON SUBUNIT OF THE F1-ATPSYNTHASE FROM TITLE 2 ESCHERICHIA COLI AND ORIENTATION OF THE SUBUNIT RELATIVE TO THE BETA TITLE 3 SUBUNITS OF THE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (EPSILON SUBUNIT); COMPND 3 CHAIN: A; COMPND 4 EC: 3.6.1.34; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: UNCC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: K38, 594, DL39, 435; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PES2; SOURCE 10 EXPRESSION_SYSTEM_GENE: UNCC KEYWDS ATPSYNTHASE, F1-ATPASE, EPSILON SUBUNIT, NMR SPECTROSCOPY, HYDROLASE EXPDTA SOLUTION NMR AUTHOR S.WILKENS,R.A.CAPALDI REVDAT 5 10-APR-24 1BSN 1 REMARK REVDAT 4 07-JUL-21 1BSN 1 REMARK REVDAT 3 24-FEB-09 1BSN 1 VERSN REVDAT 2 29-DEC-99 1BSN 4 HEADER COMPND REMARK JRNL REVDAT 2 2 4 ATOM SOURCE SEQRES REVDAT 1 02-SEP-98 1BSN 0 JRNL AUTH S.WILKENS,R.A.CAPALDI JRNL TITL SOLUTION STRUCTURE OF THE EPSILON SUBUNIT OF THE F1-ATPASE JRNL TITL 2 FROM ESCHERICHIA COLI AND INTERACTIONS OF THIS SUBUNIT WITH JRNL TITL 3 BETA SUBUNITS IN THE COMPLEX. JRNL REF J.BIOL.CHEM. V. 273 26645 1998 JRNL REFN ISSN 0021-9258 JRNL PMID 9756905 JRNL DOI 10.1074/JBC.273.41.26645 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.WILKENS,F.W.DAHLQUIST,L.P.MCINTOSH,L.W.DONALDSON, REMARK 1 AUTH 2 R.A.CAPALDI REMARK 1 TITL STRUCTURAL FEATURES OF THE EPSILON SUBUNIT OF THE REMARK 1 TITL 2 ESCHERICHIA COLI ATP SYNTHASE DETERMINED BY NMR SPECTROSCOPY REMARK 1 REF NAT.STRUCT.BIOL. V. 2 961 1995 REMARK 1 REFN ISSN 1072-8368 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SIMULATED ANNEALING AND MOLECULAR REMARK 3 DYNAMICS REMARK 4 REMARK 4 1BSN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE DEPOSITION ID IS D_1000008224. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 0.03 REMARK 210 PRESSURE : 10000 PA REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D NOESY-HSMQC; 3D TOCSY-HSMQC; REMARK 210 3D C(CO)NH; 3D H(CCO)NH; REMARK 210 SIMULTANEOUS 13C/ 15N RESOLVED REMARK 210 NOESY; VARIOUS 2D EXPERIMENTS REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : GN; UNITY REMARK 210 SPECTROMETER MANUFACTURER : GE; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR 3.1 REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 30 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: REMARK 210 THE STRUCTURE OF THE E. COLI ATPASE EPSILON SUBUNIT WAS DETERMINED REMARK 210 USING REMARK 210 TRIPLE-RESONANCE NMR EXPERIMENTS WITH 15N AND 13C/15N LABELED REMARK 210 PROTEIN. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS A 54 OE1 GLN A 55 1.50 REMARK 500 HZ1 LYS A 98 OE1 GLU A 102 1.55 REMARK 500 OE2 GLU A 120 HZ3 LYS A 123 1.58 REMARK 500 O ILE A 68 H LEU A 79 1.58 REMARK 500 H ILE A 45 O GLY A 67 1.59 REMARK 500 H ILE A 50 O ILE A 62 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 2 18.06 -149.18 REMARK 500 ALA A 11 -97.68 52.01 REMARK 500 SER A 28 -61.77 -157.35 REMARK 500 THR A 43 -150.38 -137.24 REMARK 500 SER A 65 36.71 -92.43 REMARK 500 ASP A 81 -78.20 -114.29 REMARK 500 LEU A 89 -70.55 -145.88 REMARK 500 GLU A 91 -70.70 -91.34 REMARK 500 SER A 108 176.97 150.89 REMARK 500 ASP A 113 -98.82 -87.87 REMARK 500 LYS A 136 36.30 -97.00 REMARK 500 ALA A 137 54.13 -140.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 51 0.24 SIDE CHAIN REMARK 500 ARG A 85 0.30 SIDE CHAIN REMARK 500 ARG A 93 0.23 SIDE CHAIN REMARK 500 ARG A 99 0.31 SIDE CHAIN REMARK 500 ARG A 129 0.32 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1BSH RELATED DB: PDB REMARK 900 ENSEMBLE DBREF 1BSN A 1 138 UNP P0A6E6 ATPE_ECOLI 1 138 SEQRES 1 A 138 ALA MET THR TYR HIS LEU ASP VAL VAL SER ALA GLU GLN SEQRES 2 A 138 GLN MET PHE SER GLY LEU VAL GLU LYS ILE GLN VAL THR SEQRES 3 A 138 GLY SER GLU GLY GLU LEU GLY ILE TYR PRO GLY HIS ALA SEQRES 4 A 138 PRO LEU LEU THR ALA ILE LYS PRO GLY MET ILE ARG ILE SEQRES 5 A 138 VAL LYS GLN HIS GLY HIS GLU GLU PHE ILE TYR LEU SER SEQRES 6 A 138 GLY GLY ILE LEU GLU VAL GLN PRO GLY ASN VAL THR VAL SEQRES 7 A 138 LEU ALA ASP THR ALA ILE ARG GLY GLN ASP LEU ASP GLU SEQRES 8 A 138 ALA ARG ALA MET GLU ALA LYS ARG LYS ALA GLU GLU HIS SEQRES 9 A 138 ILE SER SER SER HIS GLY ASP VAL ASP TYR ALA GLN ALA SEQRES 10 A 138 SER ALA GLU LEU ALA LYS ALA ILE ALA GLN LEU ARG VAL SEQRES 11 A 138 ILE GLU LEU THR LYS LYS ALA MET HELIX 1 1 ALA A 92 SER A 106 5 15 HELIX 2 2 TYR A 114 LYS A 136 1 23 SHEET 1 A 8 LEU A 42 ILE A 45 0 SHEET 2 A 8 GLY A 67 VAL A 71 -1 N LEU A 69 O THR A 43 SHEET 3 A 8 ASN A 75 ALA A 80 -1 N LEU A 79 O ILE A 68 SHEET 4 A 8 TYR A 4 SER A 10 1 N HIS A 5 O VAL A 76 SHEET 5 A 8 GLN A 14 THR A 26 -1 N VAL A 20 O TYR A 4 SHEET 6 A 8 GLY A 48 LYS A 54 -1 N VAL A 53 O GLU A 21 SHEET 7 A 8 GLU A 59 LEU A 64 -1 N LEU A 64 O GLY A 48 SHEET 8 A 8 ALA A 83 ARG A 85 -1 N ILE A 84 O TYR A 63 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000