HEADER HORMONE/GROWTH FACTOR 31-AUG-98 1BSX TITLE STRUCTURE AND SPECIFICITY OF NUCLEAR RECEPTOR-COACTIVATOR INTERACTIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (THYROID HORMONE RECEPTOR BETA); COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: HIS-TAGGED (THE FOLLOWING RESIDUES WERE NOT SEEN IN COMPND 7 THE ELECTRON DENSITY: MGSSHHHHHHSSGLVPRGSHM); COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PROTEIN (GRIP1); COMPND 10 CHAIN: X, Y; COMPND 11 FRAGMENT: NR-BOX2 FROM NUCLEAR RECEPTOR INTERACTION DOMAIN; COMPND 12 SYNONYM: MTIF2; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES KEYWDS NUCLEAR RECEPTORS, COACTIVATORS, GRIP1, SPECIFICITY INTERACTION SITE, KEYWDS 2 HORMONE-GROWTH FACTOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.L.WAGNER,B.D.DARIMONT,J.W.APRILETTI,M.R.STALLCUP,P.J.KUSHNER, AUTHOR 2 J.D.BAXTER,R.J.FLETTERICK,K.R.YAMAMOTO REVDAT 6 03-APR-24 1BSX 1 REMARK REVDAT 5 15-NOV-23 1BSX 1 REMARK ATOM REVDAT 4 30-MAY-18 1BSX 1 REMARK REVDAT 3 24-FEB-09 1BSX 1 VERSN REVDAT 2 01-APR-03 1BSX 1 JRNL REVDAT 1 26-AUG-99 1BSX 0 JRNL AUTH B.D.DARIMONT,R.L.WAGNER,J.W.APRILETTI,M.R.STALLCUP, JRNL AUTH 2 P.J.KUSHNER,J.D.BAXTER,R.J.FLETTERICK,K.R.YAMAMOTO JRNL TITL STRUCTURE AND SPECIFICITY OF NUCLEAR RECEPTOR-COACTIVATOR JRNL TITL 2 INTERACTIONS. JRNL REF GENES DEV. V. 12 3343 1998 JRNL REFN ISSN 0890-9369 JRNL PMID 9808622 REMARK 2 REMARK 2 RESOLUTION. 3.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 100.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 7851 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 775 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3994 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.71700 REMARK 3 B22 (A**2) : -0.71700 REMARK 3 B33 (A**2) : 1.43400 REMARK 3 B12 (A**2) : -2.27800 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.27 REMARK 3 BSOL : 36.00 REMARK 3 REMARK 3 NCS MODEL : STRICT REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : TIT.PAR REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : TIT.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1BSX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-99. REMARK 100 THE DEPOSITION ID IS D_1000007106. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-97 REMARK 200 TEMPERATURE (KELVIN) : 105 REMARK 200 PH : 4.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8490 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.600 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : 0.07700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.26100 REMARK 200 R SYM FOR SHELL (I) : 0.26100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: HUMAN THYROID HORMONE RECEPTOR BETA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 4.9 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.86667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 91.73333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 91.73333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.86667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 202 REMARK 465 GLU A 203 REMARK 465 LEU A 204 REMARK 465 GLN A 205 REMARK 465 LYS A 206 REMARK 465 SER A 207 REMARK 465 ILE A 208 REMARK 465 GLY A 209 REMARK 465 HIS A 210 REMARK 465 ILE A 255 REMARK 465 VAL A 256 REMARK 465 ASN A 257 REMARK 465 ALA A 258 REMARK 465 PRO A 259 REMARK 465 GLU A 260 REMARK 465 GLY A 261 REMARK 465 GLY A 262 REMARK 465 GLY X 686 REMARK 465 GLU B 202 REMARK 465 GLU B 203 REMARK 465 LEU B 204 REMARK 465 GLN B 205 REMARK 465 LYS B 206 REMARK 465 SER B 207 REMARK 465 ILE B 208 REMARK 465 GLY B 209 REMARK 465 HIS B 210 REMARK 465 ILE B 255 REMARK 465 VAL B 256 REMARK 465 ASN B 257 REMARK 465 ALA B 258 REMARK 465 PRO B 259 REMARK 465 GLU B 260 REMARK 465 GLY B 261 REMARK 465 GLY B 262 REMARK 465 GLY Y 686 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 GLU A 217 CG CD OE1 OE2 REMARK 470 GLU A 227 CG CD OE1 OE2 REMARK 470 GLN A 241 CG CD OE1 NE2 REMARK 470 GLN A 252 CG CD OE1 NE2 REMARK 470 LYS A 263 CG CD CE NZ REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 GLU A 390 CG CD OE1 OE2 REMARK 470 LYS X 688 CG CD CE NZ REMARK 470 ARG X 692 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 211 CG CD CE NZ REMARK 470 GLU B 217 CG CD OE1 OE2 REMARK 470 GLU B 227 CG CD OE1 OE2 REMARK 470 GLN B 241 CG CD OE1 NE2 REMARK 470 GLN B 252 CG CD OE1 NE2 REMARK 470 LYS B 263 CG CD CE NZ REMARK 470 LYS B 274 CG CD CE NZ REMARK 470 GLU B 390 CG CD OE1 OE2 REMARK 470 LYS Y 688 CG CD CE NZ REMARK 470 ARG Y 692 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP Y 696 OG SER Y 698 1.80 REMARK 500 OD1 ASP X 696 OG SER X 698 1.80 REMARK 500 O ILE Y 689 N ARG Y 692 1.97 REMARK 500 O ILE X 689 N ARG X 692 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CH2 TRP B 219 CD2 HIS B 238 6555 1.00 REMARK 500 CZ2 TRP B 219 CE1 HIS B 238 6555 1.09 REMARK 500 CZ2 TRP B 219 NE2 HIS B 238 6555 1.23 REMARK 500 CH2 TRP B 219 NE2 HIS B 238 6555 1.45 REMARK 500 CH2 TRP B 219 CG HIS B 238 6555 1.56 REMARK 500 CZ2 TRP B 219 ND1 HIS B 238 6555 1.79 REMARK 500 CD GLN X 695 NH2 ARG B 243 2665 1.95 REMARK 500 CZ2 TRP B 219 CD2 HIS B 238 6555 1.97 REMARK 500 OE1 GLN X 695 NH2 ARG B 243 2665 1.97 REMARK 500 CH2 TRP B 219 CE1 HIS B 238 6555 2.04 REMARK 500 CH2 TRP B 219 ND1 HIS B 238 6555 2.08 REMARK 500 CE2 TRP B 219 CE1 HIS B 238 6555 2.14 REMARK 500 OE1 GLN X 695 CZ ARG B 243 2665 2.15 REMARK 500 CZ3 TRP B 219 CD2 HIS B 238 6555 2.15 REMARK 500 N ASP X 696 CE1 PHE B 245 2665 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS X 687 CB - CA - C ANGL. DEV. = -14.9 DEGREES REMARK 500 HIS X 687 O - C - N ANGL. DEV. = 11.1 DEGREES REMARK 500 HIS Y 687 CB - CA - C ANGL. DEV. = -14.9 DEGREES REMARK 500 HIS Y 687 O - C - N ANGL. DEV. = 11.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 223 -31.50 -38.00 REMARK 500 THR A 224 -74.96 -73.06 REMARK 500 ALA A 228 -75.51 -69.96 REMARK 500 GLN A 235 6.59 56.72 REMARK 500 SER A 237 55.98 -99.71 REMARK 500 HIS A 238 26.31 -149.29 REMARK 500 LYS A 240 -14.47 -39.76 REMARK 500 GLN A 252 -115.83 -133.10 REMARK 500 VAL A 264 -148.14 -111.58 REMARK 500 ASP A 265 77.44 -179.58 REMARK 500 PHE A 269 -37.87 -36.77 REMARK 500 MET A 292 -18.28 -48.12 REMARK 500 VAL A 319 -3.20 -59.01 REMARK 500 GLU A 324 -73.72 -57.52 REMARK 500 ASN A 331 12.99 50.91 REMARK 500 ASP A 367 -63.67 -28.63 REMARK 500 ALA A 387 -76.38 -106.97 REMARK 500 VAL A 389 -84.90 -54.22 REMARK 500 GLU A 390 -48.52 -25.94 REMARK 500 LYS A 411 75.98 40.16 REMARK 500 THR A 415 154.47 -35.94 REMARK 500 HIS A 416 80.35 30.08 REMARK 500 PHE A 417 -104.50 -86.49 REMARK 500 TRP A 418 -59.04 -15.80 REMARK 500 LYS X 688 -110.86 78.39 REMARK 500 LEU X 690 -59.21 -29.60 REMARK 500 SER X 697 -85.62 -75.57 REMARK 500 LYS B 223 -31.54 -37.96 REMARK 500 THR B 224 -74.96 -73.10 REMARK 500 ALA B 228 -75.51 -69.97 REMARK 500 GLN B 235 6.56 56.74 REMARK 500 SER B 237 55.95 -99.67 REMARK 500 HIS B 238 26.37 -149.32 REMARK 500 LYS B 240 -14.52 -39.74 REMARK 500 GLN B 252 -115.82 -133.13 REMARK 500 VAL B 264 -148.15 -111.61 REMARK 500 ASP B 265 77.47 -179.55 REMARK 500 PHE B 269 -37.88 -36.76 REMARK 500 MET B 292 -18.32 -48.07 REMARK 500 VAL B 319 -3.26 -58.97 REMARK 500 GLU B 324 -73.71 -57.49 REMARK 500 ASN B 331 12.99 50.92 REMARK 500 ASP B 367 -63.69 -28.60 REMARK 500 ALA B 387 -76.38 -106.95 REMARK 500 VAL B 389 -84.87 -54.20 REMARK 500 GLU B 390 -48.52 -25.98 REMARK 500 LYS B 411 75.90 40.19 REMARK 500 THR B 415 154.46 -35.92 REMARK 500 HIS B 416 80.38 30.04 REMARK 500 PHE B 417 -104.51 -86.42 REMARK 500 REMARK 500 THIS ENTRY HAS 54 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: A REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: NR-BOX BINDING SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: B REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: NR-BOX BINDING SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE T3 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE T3 B 2 DBREF 1BSX A 202 461 UNP P10828 THB1_HUMAN 202 461 DBREF 1BSX B 202 461 UNP P10828 THB1_HUMAN 202 461 DBREF 1BSX X 686 698 PDB 1BSX 1BSX 686 698 DBREF 1BSX Y 686 698 PDB 1BSX 1BSX 686 698 SEQRES 1 A 260 GLU GLU LEU GLN LYS SER ILE GLY HIS LYS PRO GLU PRO SEQRES 2 A 260 THR ASP GLU GLU TRP GLU LEU ILE LYS THR VAL THR GLU SEQRES 3 A 260 ALA HIS VAL ALA THR ASN ALA GLN GLY SER HIS TRP LYS SEQRES 4 A 260 GLN LYS ARG LYS PHE LEU PRO GLU ASP ILE GLY GLN ALA SEQRES 5 A 260 PRO ILE VAL ASN ALA PRO GLU GLY GLY LYS VAL ASP LEU SEQRES 6 A 260 GLU ALA PHE SER HIS PHE THR LYS ILE ILE THR PRO ALA SEQRES 7 A 260 ILE THR ARG VAL VAL ASP PHE ALA LYS LYS LEU PRO MET SEQRES 8 A 260 PHE CYS GLU LEU PRO CYS GLU ASP GLN ILE ILE LEU LEU SEQRES 9 A 260 LYS GLY CYS CYS MET GLU ILE MET SER LEU ARG ALA ALA SEQRES 10 A 260 VAL ARG TYR ASP PRO GLU SER GLU THR LEU THR LEU ASN SEQRES 11 A 260 GLY GLU MET ALA VAL THR ARG GLY GLN LEU LYS ASN GLY SEQRES 12 A 260 GLY LEU GLY VAL VAL SER ASP ALA ILE PHE ASP LEU GLY SEQRES 13 A 260 MET SER LEU SER SER PHE ASN LEU ASP ASP THR GLU VAL SEQRES 14 A 260 ALA LEU LEU GLN ALA VAL LEU LEU MET SER SER ASP ARG SEQRES 15 A 260 PRO GLY LEU ALA CYS VAL GLU ARG ILE GLU LYS TYR GLN SEQRES 16 A 260 ASP SER PHE LEU LEU ALA PHE GLU HIS TYR ILE ASN TYR SEQRES 17 A 260 ARG LYS HIS HIS VAL THR HIS PHE TRP PRO LYS LEU LEU SEQRES 18 A 260 MET LYS VAL THR ASP LEU ARG MET ILE GLY ALA CYS HIS SEQRES 19 A 260 ALA SER ARG PHE LEU HIS MET LYS VAL GLU CYS PRO THR SEQRES 20 A 260 GLU LEU PHE PRO PRO LEU PHE LEU GLU VAL PHE GLU ASP SEQRES 1 X 13 GLY HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER SEQRES 1 B 260 GLU GLU LEU GLN LYS SER ILE GLY HIS LYS PRO GLU PRO SEQRES 2 B 260 THR ASP GLU GLU TRP GLU LEU ILE LYS THR VAL THR GLU SEQRES 3 B 260 ALA HIS VAL ALA THR ASN ALA GLN GLY SER HIS TRP LYS SEQRES 4 B 260 GLN LYS ARG LYS PHE LEU PRO GLU ASP ILE GLY GLN ALA SEQRES 5 B 260 PRO ILE VAL ASN ALA PRO GLU GLY GLY LYS VAL ASP LEU SEQRES 6 B 260 GLU ALA PHE SER HIS PHE THR LYS ILE ILE THR PRO ALA SEQRES 7 B 260 ILE THR ARG VAL VAL ASP PHE ALA LYS LYS LEU PRO MET SEQRES 8 B 260 PHE CYS GLU LEU PRO CYS GLU ASP GLN ILE ILE LEU LEU SEQRES 9 B 260 LYS GLY CYS CYS MET GLU ILE MET SER LEU ARG ALA ALA SEQRES 10 B 260 VAL ARG TYR ASP PRO GLU SER GLU THR LEU THR LEU ASN SEQRES 11 B 260 GLY GLU MET ALA VAL THR ARG GLY GLN LEU LYS ASN GLY SEQRES 12 B 260 GLY LEU GLY VAL VAL SER ASP ALA ILE PHE ASP LEU GLY SEQRES 13 B 260 MET SER LEU SER SER PHE ASN LEU ASP ASP THR GLU VAL SEQRES 14 B 260 ALA LEU LEU GLN ALA VAL LEU LEU MET SER SER ASP ARG SEQRES 15 B 260 PRO GLY LEU ALA CYS VAL GLU ARG ILE GLU LYS TYR GLN SEQRES 16 B 260 ASP SER PHE LEU LEU ALA PHE GLU HIS TYR ILE ASN TYR SEQRES 17 B 260 ARG LYS HIS HIS VAL THR HIS PHE TRP PRO LYS LEU LEU SEQRES 18 B 260 MET LYS VAL THR ASP LEU ARG MET ILE GLY ALA CYS HIS SEQRES 19 B 260 ALA SER ARG PHE LEU HIS MET LYS VAL GLU CYS PRO THR SEQRES 20 B 260 GLU LEU PHE PRO PRO LEU PHE LEU GLU VAL PHE GLU ASP SEQRES 1 Y 13 GLY HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER HET T3 A 1 23 HET T3 B 2 23 HETNAM T3 3,5,3'TRIIODOTHYRONINE HETSYN T3 T3; THYROID HORMONE; LIOTHYRONINE FORMUL 5 T3 2(C15 H12 I3 N O4) HELIX 1 1 ASP A 216 ALA A 231 1 16 HELIX 2 2 LEU A 266 THR A 273 1 8 HELIX 3 3 ILE A 276 LYS A 289 1 14 HELIX 4 4 PRO A 291 CYS A 294 1 4 HELIX 5 5 CYS A 298 ARG A 320 1 23 HELIX 6 6 LEU A 330 GLY A 332 5 3 HELIX 7 7 ARG A 338 ASN A 343 1 6 HELIX 8 8 GLY A 347 SER A 362 5 16 HELIX 9 9 ASP A 367 LEU A 378 1 12 HELIX 10 10 VAL A 389 ARG A 410 1 22 HELIX 11 11 TRP A 418 GLU A 445 1 28 HELIX 12 12 PRO A 453 PHE A 459 1 7 HELIX 13 13 ILE X 689 GLN X 695 1 7 HELIX 14 1 ASP B 216 ALA B 231 1 16 HELIX 15 2 LEU B 266 THR B 273 1 8 HELIX 16 3 ILE B 276 LYS B 289 1 14 HELIX 17 4 PRO B 291 CYS B 294 1 4 HELIX 18 5 CYS B 298 ARG B 320 1 23 HELIX 19 6 LEU B 330 GLY B 332 5 3 HELIX 20 7 ARG B 338 ASN B 343 1 6 HELIX 21 8 GLY B 347 SER B 362 5 16 HELIX 22 9 ASP B 367 LEU B 378 1 12 HELIX 23 10 VAL B 389 ARG B 410 1 22 HELIX 24 11 TRP B 418 GLU B 445 1 28 HELIX 25 12 PRO B 453 PHE B 459 1 7 HELIX 26 13 ILE Y 689 GLN Y 695 1 7 SHEET 1 A 2 THR A 327 LEU A 330 0 SHEET 2 A 2 MET A 334 THR A 337 -1 N VAL A 336 O LEU A 328 SHEET 1 B 2 THR B 327 LEU B 330 0 SHEET 2 B 2 MET B 334 THR B 337 -1 N VAL B 336 O LEU B 328 SITE 1 A 9 VAL A 284 ALA A 287 LYS A 288 PHE A 293 SITE 2 A 9 ILE A 302 LEU A 305 LEU A 454 GLU A 457 SITE 3 A 9 VAL A 458 SITE 1 B 9 VAL B 284 ALA B 287 LYS B 288 PHE B 293 SITE 2 B 9 ILE B 302 LEU B 305 LEU B 454 GLU B 457 SITE 3 B 9 VAL B 458 SITE 1 AC1 9 PHE A 272 ARG A 282 LEU A 330 ASN A 331 SITE 2 AC1 9 LEU A 346 ILE A 353 HIS A 435 MET A 442 SITE 3 AC1 9 PHE A 455 SITE 1 AC2 9 PHE B 272 ARG B 282 LEU B 330 ASN B 331 SITE 2 AC2 9 LEU B 346 ILE B 353 HIS B 435 MET B 442 SITE 3 AC2 9 PHE B 455 CRYST1 95.200 95.200 137.600 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010504 0.006065 0.000000 0.00000 SCALE2 0.000000 0.012129 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007267 0.00000 MTRIX1 1 0.526970 0.849090 -0.036740 -68.69247 1 MTRIX2 1 -0.410490 0.292140 0.863800 48.32660 1 MTRIX3 1 0.744180 -0.440120 0.502490 -6.73853 1