data_1BYD # _entry.id 1BYD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1BYD pdb_00001byd 10.2210/pdb1byd/pdb WWPDB D_1000172148 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-07-31 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2019-08-14 6 'Structure model' 2 0 2020-07-29 7 'Structure model' 2 1 2024-02-07 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' Other 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' Advisory 9 6 'Structure model' 'Atomic model' 10 6 'Structure model' 'Data collection' 11 6 'Structure model' 'Derived calculations' 12 6 'Structure model' 'Non-polymer description' 13 6 'Structure model' 'Structure summary' 14 7 'Structure model' 'Data collection' 15 7 'Structure model' 'Database references' 16 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' software 3 5 'Structure model' software 4 6 'Structure model' atom_site 5 6 'Structure model' chem_comp 6 6 'Structure model' database_PDB_caveat 7 6 'Structure model' entity 8 6 'Structure model' entity_name_com 9 6 'Structure model' pdbx_branch_scheme 10 6 'Structure model' pdbx_chem_comp_identifier 11 6 'Structure model' pdbx_entity_branch 12 6 'Structure model' pdbx_entity_branch_descriptor 13 6 'Structure model' pdbx_entity_branch_link 14 6 'Structure model' pdbx_entity_branch_list 15 6 'Structure model' pdbx_entity_nonpoly 16 6 'Structure model' pdbx_molecule_features 17 6 'Structure model' pdbx_nonpoly_scheme 18 6 'Structure model' pdbx_validate_chiral 19 6 'Structure model' struct_conn 20 6 'Structure model' struct_site 21 6 'Structure model' struct_site_gen 22 7 'Structure model' chem_comp 23 7 'Structure model' chem_comp_atom 24 7 'Structure model' chem_comp_bond 25 7 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_database_status.process_site' 2 4 'Structure model' '_software.classification' 3 5 'Structure model' '_software.classification' 4 6 'Structure model' '_atom_site.B_iso_or_equiv' 5 6 'Structure model' '_atom_site.Cartn_x' 6 6 'Structure model' '_atom_site.Cartn_y' 7 6 'Structure model' '_atom_site.Cartn_z' 8 6 'Structure model' '_atom_site.auth_asym_id' 9 6 'Structure model' '_atom_site.auth_atom_id' 10 6 'Structure model' '_atom_site.auth_comp_id' 11 6 'Structure model' '_atom_site.auth_seq_id' 12 6 'Structure model' '_atom_site.label_atom_id' 13 6 'Structure model' '_atom_site.label_comp_id' 14 6 'Structure model' '_atom_site.type_symbol' 15 6 'Structure model' '_chem_comp.formula' 16 6 'Structure model' '_chem_comp.formula_weight' 17 6 'Structure model' '_chem_comp.id' 18 6 'Structure model' '_chem_comp.mon_nstd_flag' 19 6 'Structure model' '_chem_comp.name' 20 6 'Structure model' '_chem_comp.pdbx_synonyms' 21 6 'Structure model' '_chem_comp.type' 22 6 'Structure model' '_entity.pdbx_description' 23 6 'Structure model' '_entity.type' 24 6 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 25 6 'Structure model' '_pdbx_validate_chiral.auth_atom_id' 26 6 'Structure model' '_pdbx_validate_chiral.auth_comp_id' 27 6 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 28 7 'Structure model' '_chem_comp.pdbx_synonyms' 29 7 'Structure model' '_database_2.pdbx_DOI' 30 7 'Structure model' '_database_2.pdbx_database_accession' # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'THR A 256 HAS WRONG CHIRALITY AT ATOM CB' 2 'RR7 C 1 HAS WRONG CHIRALITY AT ATOM C1' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1BYD _pdbx_database_status.recvd_initial_deposition_date 1994-01-25 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mikami, B.' 1 'Degano, M.' 2 'Hehre, E.J.' 3 'Sacchettini, J.C.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Crystal structures of soybean beta-amylase reacted with beta-maltose and maltal: active site components and their apparent roles in catalysis. ; Biochemistry 33 7779 7787 1994 BICHAW US 0006-2960 0033 ? 8011643 10.1021/bi00191a005 1 'The 2.0-Angstroms Resolution Structure of Soybean Beta-Amylase Complexed with Alpha-Cyclodextrin' Biochemistry 32 6836 ? 1993 BICHAW US 0006-2960 0033 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mikami, B.' 1 ? primary 'Degano, M.' 2 ? primary 'Hehre, E.J.' 3 ? primary 'Sacchettini, J.C.' 4 ? 1 'Mikami, B.' 5 ? 1 'Hehre, E.J.' 6 ? 1 'Sato, M.' 7 ? 1 'Katsube, Y.' 8 ? 1 'Hirose, M.' 9 ? 1 'Morita, Y.' 10 ? 1 'Sacchettini, J.C.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man BETA-AMYLASE 56071.316 1 3.2.1.2 ? ? ? 2 branched man 'alpha-D-glucopyranose-(1-4)-2-deoxy-beta-D-arabino-hexopyranose' 326.297 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 water nat water 18.015 331 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 2-deoxy-maltose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ATSDSNMLLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLFQLVQ ECGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKS FRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPRIGEFQCYDKYLKADFKAAVARAGHPEWELPDDAGKYND VPESTGFFKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLN DRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNAKP QGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPKIPIEVLLEATKPT LPFPWLPETDMKVDG ; _entity_poly.pdbx_seq_one_letter_code_can ;ATSDSNMLLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLFQLVQ ECGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKS FRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPRIGEFQCYDKYLKADFKAAVARAGHPEWELPDDAGKYND VPESTGFFKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLN DRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNAKP QGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPKIPIEVLLEATKPT LPFPWLPETDMKVDG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 THR n 1 3 SER n 1 4 ASP n 1 5 SER n 1 6 ASN n 1 7 MET n 1 8 LEU n 1 9 LEU n 1 10 ASN n 1 11 TYR n 1 12 VAL n 1 13 PRO n 1 14 VAL n 1 15 TYR n 1 16 VAL n 1 17 MET n 1 18 LEU n 1 19 PRO n 1 20 LEU n 1 21 GLY n 1 22 VAL n 1 23 VAL n 1 24 ASN n 1 25 VAL n 1 26 ASP n 1 27 ASN n 1 28 VAL n 1 29 PHE n 1 30 GLU n 1 31 ASP n 1 32 PRO n 1 33 ASP n 1 34 GLY n 1 35 LEU n 1 36 LYS n 1 37 GLU n 1 38 GLN n 1 39 LEU n 1 40 LEU n 1 41 GLN n 1 42 LEU n 1 43 ARG n 1 44 ALA n 1 45 ALA n 1 46 GLY n 1 47 VAL n 1 48 ASP n 1 49 GLY n 1 50 VAL n 1 51 MET n 1 52 VAL n 1 53 ASP n 1 54 VAL n 1 55 TRP n 1 56 TRP n 1 57 GLY n 1 58 ILE n 1 59 ILE n 1 60 GLU n 1 61 LEU n 1 62 LYS n 1 63 GLY n 1 64 PRO n 1 65 LYS n 1 66 GLN n 1 67 TYR n 1 68 ASP n 1 69 TRP n 1 70 ARG n 1 71 ALA n 1 72 TYR n 1 73 ARG n 1 74 SER n 1 75 LEU n 1 76 PHE n 1 77 GLN n 1 78 LEU n 1 79 VAL n 1 80 GLN n 1 81 GLU n 1 82 CYS n 1 83 GLY n 1 84 LEU n 1 85 THR n 1 86 LEU n 1 87 GLN n 1 88 ALA n 1 89 ILE n 1 90 MET n 1 91 SER n 1 92 PHE n 1 93 HIS n 1 94 GLN n 1 95 CYS n 1 96 GLY n 1 97 GLY n 1 98 ASN n 1 99 VAL n 1 100 GLY n 1 101 ASP n 1 102 ILE n 1 103 VAL n 1 104 ASN n 1 105 ILE n 1 106 PRO n 1 107 ILE n 1 108 PRO n 1 109 GLN n 1 110 TRP n 1 111 VAL n 1 112 LEU n 1 113 ASP n 1 114 ILE n 1 115 GLY n 1 116 GLU n 1 117 SER n 1 118 ASN n 1 119 HIS n 1 120 ASP n 1 121 ILE n 1 122 PHE n 1 123 TYR n 1 124 THR n 1 125 ASN n 1 126 ARG n 1 127 SER n 1 128 GLY n 1 129 THR n 1 130 ARG n 1 131 ASN n 1 132 LYS n 1 133 GLU n 1 134 TYR n 1 135 LEU n 1 136 THR n 1 137 VAL n 1 138 GLY n 1 139 VAL n 1 140 ASP n 1 141 ASN n 1 142 GLU n 1 143 PRO n 1 144 ILE n 1 145 PHE n 1 146 HIS n 1 147 GLY n 1 148 ARG n 1 149 THR n 1 150 ALA n 1 151 ILE n 1 152 GLU n 1 153 ILE n 1 154 TYR n 1 155 SER n 1 156 ASP n 1 157 TYR n 1 158 MET n 1 159 LYS n 1 160 SER n 1 161 PHE n 1 162 ARG n 1 163 GLU n 1 164 ASN n 1 165 MET n 1 166 SER n 1 167 ASP n 1 168 PHE n 1 169 LEU n 1 170 GLU n 1 171 SER n 1 172 GLY n 1 173 LEU n 1 174 ILE n 1 175 ILE n 1 176 ASP n 1 177 ILE n 1 178 GLU n 1 179 VAL n 1 180 GLY n 1 181 LEU n 1 182 GLY n 1 183 PRO n 1 184 ALA n 1 185 GLY n 1 186 GLU n 1 187 LEU n 1 188 ARG n 1 189 TYR n 1 190 PRO n 1 191 SER n 1 192 TYR n 1 193 PRO n 1 194 GLN n 1 195 SER n 1 196 GLN n 1 197 GLY n 1 198 TRP n 1 199 GLU n 1 200 PHE n 1 201 PRO n 1 202 ARG n 1 203 ILE n 1 204 GLY n 1 205 GLU n 1 206 PHE n 1 207 GLN n 1 208 CYS n 1 209 TYR n 1 210 ASP n 1 211 LYS n 1 212 TYR n 1 213 LEU n 1 214 LYS n 1 215 ALA n 1 216 ASP n 1 217 PHE n 1 218 LYS n 1 219 ALA n 1 220 ALA n 1 221 VAL n 1 222 ALA n 1 223 ARG n 1 224 ALA n 1 225 GLY n 1 226 HIS n 1 227 PRO n 1 228 GLU n 1 229 TRP n 1 230 GLU n 1 231 LEU n 1 232 PRO n 1 233 ASP n 1 234 ASP n 1 235 ALA n 1 236 GLY n 1 237 LYS n 1 238 TYR n 1 239 ASN n 1 240 ASP n 1 241 VAL n 1 242 PRO n 1 243 GLU n 1 244 SER n 1 245 THR n 1 246 GLY n 1 247 PHE n 1 248 PHE n 1 249 LYS n 1 250 SER n 1 251 ASN n 1 252 GLY n 1 253 THR n 1 254 TYR n 1 255 VAL n 1 256 THR n 1 257 GLU n 1 258 LYS n 1 259 GLY n 1 260 LYS n 1 261 PHE n 1 262 PHE n 1 263 LEU n 1 264 THR n 1 265 TRP n 1 266 TYR n 1 267 SER n 1 268 ASN n 1 269 LYS n 1 270 LEU n 1 271 LEU n 1 272 ASN n 1 273 HIS n 1 274 GLY n 1 275 ASP n 1 276 GLN n 1 277 ILE n 1 278 LEU n 1 279 ASP n 1 280 GLU n 1 281 ALA n 1 282 ASN n 1 283 LYS n 1 284 ALA n 1 285 PHE n 1 286 LEU n 1 287 GLY n 1 288 CYS n 1 289 LYS n 1 290 VAL n 1 291 LYS n 1 292 LEU n 1 293 ALA n 1 294 ILE n 1 295 LYS n 1 296 VAL n 1 297 SER n 1 298 GLY n 1 299 ILE n 1 300 HIS n 1 301 TRP n 1 302 TRP n 1 303 TYR n 1 304 LYS n 1 305 VAL n 1 306 GLU n 1 307 ASN n 1 308 HIS n 1 309 ALA n 1 310 ALA n 1 311 GLU n 1 312 LEU n 1 313 THR n 1 314 ALA n 1 315 GLY n 1 316 TYR n 1 317 TYR n 1 318 ASN n 1 319 LEU n 1 320 ASN n 1 321 ASP n 1 322 ARG n 1 323 ASP n 1 324 GLY n 1 325 TYR n 1 326 ARG n 1 327 PRO n 1 328 ILE n 1 329 ALA n 1 330 ARG n 1 331 MET n 1 332 LEU n 1 333 SER n 1 334 ARG n 1 335 HIS n 1 336 HIS n 1 337 ALA n 1 338 ILE n 1 339 LEU n 1 340 ASN n 1 341 PHE n 1 342 THR n 1 343 CYS n 1 344 LEU n 1 345 GLU n 1 346 MET n 1 347 ARG n 1 348 ASP n 1 349 SER n 1 350 GLU n 1 351 GLN n 1 352 PRO n 1 353 SER n 1 354 ASP n 1 355 ALA n 1 356 LYS n 1 357 SER n 1 358 GLY n 1 359 PRO n 1 360 GLN n 1 361 GLU n 1 362 LEU n 1 363 VAL n 1 364 GLN n 1 365 GLN n 1 366 VAL n 1 367 LEU n 1 368 SER n 1 369 GLY n 1 370 GLY n 1 371 TRP n 1 372 ARG n 1 373 GLU n 1 374 ASP n 1 375 ILE n 1 376 ARG n 1 377 VAL n 1 378 ALA n 1 379 GLY n 1 380 GLU n 1 381 ASN n 1 382 ALA n 1 383 LEU n 1 384 PRO n 1 385 ARG n 1 386 TYR n 1 387 ASP n 1 388 ALA n 1 389 THR n 1 390 ALA n 1 391 TYR n 1 392 ASN n 1 393 GLN n 1 394 ILE n 1 395 ILE n 1 396 LEU n 1 397 ASN n 1 398 ALA n 1 399 LYS n 1 400 PRO n 1 401 GLN n 1 402 GLY n 1 403 VAL n 1 404 ASN n 1 405 ASN n 1 406 ASN n 1 407 GLY n 1 408 PRO n 1 409 PRO n 1 410 LYS n 1 411 LEU n 1 412 SER n 1 413 MET n 1 414 PHE n 1 415 GLY n 1 416 VAL n 1 417 THR n 1 418 TYR n 1 419 LEU n 1 420 ARG n 1 421 LEU n 1 422 SER n 1 423 ASP n 1 424 ASP n 1 425 LEU n 1 426 LEU n 1 427 GLN n 1 428 LYS n 1 429 SER n 1 430 ASN n 1 431 PHE n 1 432 ASN n 1 433 ILE n 1 434 PHE n 1 435 LYS n 1 436 LYS n 1 437 PHE n 1 438 VAL n 1 439 LEU n 1 440 LYS n 1 441 MET n 1 442 HIS n 1 443 ALA n 1 444 ASP n 1 445 GLN n 1 446 ASP n 1 447 TYR n 1 448 CYS n 1 449 ALA n 1 450 ASN n 1 451 PRO n 1 452 GLN n 1 453 LYS n 1 454 TYR n 1 455 ASN n 1 456 HIS n 1 457 ALA n 1 458 ILE n 1 459 THR n 1 460 PRO n 1 461 LEU n 1 462 LYS n 1 463 PRO n 1 464 SER n 1 465 ALA n 1 466 PRO n 1 467 LYS n 1 468 ILE n 1 469 PRO n 1 470 ILE n 1 471 GLU n 1 472 VAL n 1 473 LEU n 1 474 LEU n 1 475 GLU n 1 476 ALA n 1 477 THR n 1 478 LYS n 1 479 PRO n 1 480 THR n 1 481 LEU n 1 482 PRO n 1 483 PHE n 1 484 PRO n 1 485 TRP n 1 486 LEU n 1 487 PRO n 1 488 GLU n 1 489 THR n 1 490 ASP n 1 491 MET n 1 492 LYS n 1 493 VAL n 1 494 ASP n 1 495 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name soybean _entity_src_gen.gene_src_genus Glycine _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Glycine max' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3847 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'WURCS=2.0/2,2,1/[ad122h-1b_1-5][a2122h-1a_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 2 2 '[][b-D-2-deoxy-Glcp]{[(4+1)][a-D-Glcp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 RR7 _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RR7 'D-saccharide, beta linking' . 2-deoxy-beta-D-arabino-hexopyranose 2-deoxy-alpha-D-glucopyranose 'C6 H12 O5' 164.156 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? A . n A 1 2 THR 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 ASP 4 4 ? ? ? A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 MET 7 7 7 MET MET A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 MET 17 17 17 MET MET A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 MET 51 51 51 MET MET A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 TRP 55 55 55 TRP TRP A . n A 1 56 TRP 56 56 56 TRP TRP A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 GLN 66 66 66 GLN GLN A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 TRP 69 69 69 TRP TRP A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 CYS 82 82 82 CYS CYS A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 MET 90 90 90 MET MET A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 ILE 105 105 105 ILE ILE A . n A 1 106 PRO 106 106 106 PRO PRO A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 GLN 109 109 109 GLN GLN A . n A 1 110 TRP 110 110 110 TRP TRP A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 HIS 119 119 119 HIS HIS A . n A 1 120 ASP 120 120 120 ASP ASP A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 PHE 122 122 122 PHE PHE A . n A 1 123 TYR 123 123 123 TYR TYR A . n A 1 124 THR 124 124 124 THR THR A . n A 1 125 ASN 125 125 125 ASN ASN A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 ARG 130 130 130 ARG ARG A . n A 1 131 ASN 131 131 131 ASN ASN A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 GLU 133 133 133 GLU GLU A . n A 1 134 TYR 134 134 134 TYR TYR A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 VAL 139 139 139 VAL VAL A . n A 1 140 ASP 140 140 140 ASP ASP A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 PRO 143 143 143 PRO PRO A . n A 1 144 ILE 144 144 144 ILE ILE A . n A 1 145 PHE 145 145 145 PHE PHE A . n A 1 146 HIS 146 146 146 HIS HIS A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 TYR 154 154 154 TYR TYR A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 TYR 157 157 157 TYR TYR A . n A 1 158 MET 158 158 158 MET MET A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 PHE 161 161 161 PHE PHE A . n A 1 162 ARG 162 162 162 ARG ARG A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 MET 165 165 165 MET MET A . n A 1 166 SER 166 166 166 SER SER A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 PHE 168 168 168 PHE PHE A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 ILE 174 174 174 ILE ILE A . n A 1 175 ILE 175 175 175 ILE ILE A . n A 1 176 ASP 176 176 176 ASP ASP A . n A 1 177 ILE 177 177 177 ILE ILE A . n A 1 178 GLU 178 178 178 GLU GLU A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 GLY 180 180 180 GLY GLY A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 GLY 182 182 182 GLY GLY A . n A 1 183 PRO 183 183 183 PRO PRO A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 LEU 187 187 187 LEU LEU A . n A 1 188 ARG 188 188 188 ARG ARG A . n A 1 189 TYR 189 189 189 TYR TYR A . n A 1 190 PRO 190 190 190 PRO PRO A . n A 1 191 SER 191 191 191 SER SER A . n A 1 192 TYR 192 192 192 TYR TYR A . n A 1 193 PRO 193 193 193 PRO PRO A . n A 1 194 GLN 194 194 194 GLN GLN A . n A 1 195 SER 195 195 195 SER SER A . n A 1 196 GLN 196 196 196 GLN GLN A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 TRP 198 198 198 TRP TRP A . n A 1 199 GLU 199 199 199 GLU GLU A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 PRO 201 201 201 PRO PRO A . n A 1 202 ARG 202 202 202 ARG ARG A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 GLY 204 204 204 GLY GLY A . n A 1 205 GLU 205 205 205 GLU GLU A . n A 1 206 PHE 206 206 206 PHE PHE A . n A 1 207 GLN 207 207 207 GLN GLN A . n A 1 208 CYS 208 208 208 CYS CYS A . n A 1 209 TYR 209 209 209 TYR TYR A . n A 1 210 ASP 210 210 210 ASP ASP A . n A 1 211 LYS 211 211 211 LYS LYS A . n A 1 212 TYR 212 212 212 TYR TYR A . n A 1 213 LEU 213 213 213 LEU LEU A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 ASP 216 216 216 ASP ASP A . n A 1 217 PHE 217 217 217 PHE PHE A . n A 1 218 LYS 218 218 218 LYS LYS A . n A 1 219 ALA 219 219 219 ALA ALA A . n A 1 220 ALA 220 220 220 ALA ALA A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 ARG 223 223 223 ARG ARG A . n A 1 224 ALA 224 224 224 ALA ALA A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 HIS 226 226 226 HIS HIS A . n A 1 227 PRO 227 227 227 PRO PRO A . n A 1 228 GLU 228 228 228 GLU GLU A . n A 1 229 TRP 229 229 229 TRP TRP A . n A 1 230 GLU 230 230 230 GLU GLU A . n A 1 231 LEU 231 231 231 LEU LEU A . n A 1 232 PRO 232 232 232 PRO PRO A . n A 1 233 ASP 233 233 233 ASP ASP A . n A 1 234 ASP 234 234 234 ASP ASP A . n A 1 235 ALA 235 235 235 ALA ALA A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 LYS 237 237 237 LYS LYS A . n A 1 238 TYR 238 238 238 TYR TYR A . n A 1 239 ASN 239 239 239 ASN ASN A . n A 1 240 ASP 240 240 240 ASP ASP A . n A 1 241 VAL 241 241 241 VAL VAL A . n A 1 242 PRO 242 242 242 PRO PRO A . n A 1 243 GLU 243 243 243 GLU GLU A . n A 1 244 SER 244 244 244 SER SER A . n A 1 245 THR 245 245 245 THR THR A . n A 1 246 GLY 246 246 246 GLY GLY A . n A 1 247 PHE 247 247 247 PHE PHE A . n A 1 248 PHE 248 248 248 PHE PHE A . n A 1 249 LYS 249 249 249 LYS LYS A . n A 1 250 SER 250 250 250 SER SER A . n A 1 251 ASN 251 251 251 ASN ASN A . n A 1 252 GLY 252 252 252 GLY GLY A . n A 1 253 THR 253 253 253 THR THR A . n A 1 254 TYR 254 254 254 TYR TYR A . n A 1 255 VAL 255 255 255 VAL VAL A . n A 1 256 THR 256 256 256 THR THR A . n A 1 257 GLU 257 257 257 GLU GLU A . n A 1 258 LYS 258 258 258 LYS LYS A . n A 1 259 GLY 259 259 259 GLY GLY A . n A 1 260 LYS 260 260 260 LYS LYS A . n A 1 261 PHE 261 261 261 PHE PHE A . n A 1 262 PHE 262 262 262 PHE PHE A . n A 1 263 LEU 263 263 263 LEU LEU A . n A 1 264 THR 264 264 264 THR THR A . n A 1 265 TRP 265 265 265 TRP TRP A . n A 1 266 TYR 266 266 266 TYR TYR A . n A 1 267 SER 267 267 267 SER SER A . n A 1 268 ASN 268 268 268 ASN ASN A . n A 1 269 LYS 269 269 269 LYS LYS A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 LEU 271 271 271 LEU LEU A . n A 1 272 ASN 272 272 272 ASN ASN A . n A 1 273 HIS 273 273 273 HIS HIS A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 ASP 275 275 275 ASP ASP A . n A 1 276 GLN 276 276 276 GLN GLN A . n A 1 277 ILE 277 277 277 ILE ILE A . n A 1 278 LEU 278 278 278 LEU LEU A . n A 1 279 ASP 279 279 279 ASP ASP A . n A 1 280 GLU 280 280 280 GLU GLU A . n A 1 281 ALA 281 281 281 ALA ALA A . n A 1 282 ASN 282 282 282 ASN ASN A . n A 1 283 LYS 283 283 283 LYS LYS A . n A 1 284 ALA 284 284 284 ALA ALA A . n A 1 285 PHE 285 285 285 PHE PHE A . n A 1 286 LEU 286 286 286 LEU LEU A . n A 1 287 GLY 287 287 287 GLY GLY A . n A 1 288 CYS 288 288 288 CYS CYS A . n A 1 289 LYS 289 289 289 LYS LYS A . n A 1 290 VAL 290 290 290 VAL VAL A . n A 1 291 LYS 291 291 291 LYS LYS A . n A 1 292 LEU 292 292 292 LEU LEU A . n A 1 293 ALA 293 293 293 ALA ALA A . n A 1 294 ILE 294 294 294 ILE ILE A . n A 1 295 LYS 295 295 295 LYS LYS A . n A 1 296 VAL 296 296 296 VAL VAL A . n A 1 297 SER 297 297 297 SER SER A . n A 1 298 GLY 298 298 298 GLY GLY A . n A 1 299 ILE 299 299 299 ILE ILE A . n A 1 300 HIS 300 300 300 HIS HIS A . n A 1 301 TRP 301 301 301 TRP TRP A . n A 1 302 TRP 302 302 302 TRP TRP A . n A 1 303 TYR 303 303 303 TYR TYR A . n A 1 304 LYS 304 304 304 LYS LYS A . n A 1 305 VAL 305 305 305 VAL VAL A . n A 1 306 GLU 306 306 306 GLU GLU A . n A 1 307 ASN 307 307 307 ASN ASN A . n A 1 308 HIS 308 308 308 HIS HIS A . n A 1 309 ALA 309 309 309 ALA ALA A . n A 1 310 ALA 310 310 310 ALA ALA A . n A 1 311 GLU 311 311 311 GLU GLU A . n A 1 312 LEU 312 312 312 LEU LEU A . n A 1 313 THR 313 313 313 THR THR A . n A 1 314 ALA 314 314 314 ALA ALA A . n A 1 315 GLY 315 315 315 GLY GLY A . n A 1 316 TYR 316 316 316 TYR TYR A . n A 1 317 TYR 317 317 317 TYR TYR A . n A 1 318 ASN 318 318 318 ASN ASN A . n A 1 319 LEU 319 319 319 LEU LEU A . n A 1 320 ASN 320 320 320 ASN ASN A . n A 1 321 ASP 321 321 321 ASP ASP A . n A 1 322 ARG 322 322 322 ARG ARG A . n A 1 323 ASP 323 323 323 ASP ASP A . n A 1 324 GLY 324 324 324 GLY GLY A . n A 1 325 TYR 325 325 325 TYR TYR A . n A 1 326 ARG 326 326 326 ARG ARG A . n A 1 327 PRO 327 327 327 PRO PRO A . n A 1 328 ILE 328 328 328 ILE ILE A . n A 1 329 ALA 329 329 329 ALA ALA A . n A 1 330 ARG 330 330 330 ARG ARG A . n A 1 331 MET 331 331 331 MET MET A . n A 1 332 LEU 332 332 332 LEU LEU A . n A 1 333 SER 333 333 333 SER SER A . n A 1 334 ARG 334 334 334 ARG ARG A . n A 1 335 HIS 335 335 335 HIS HIS A . n A 1 336 HIS 336 336 336 HIS HIS A . n A 1 337 ALA 337 337 337 ALA ALA A . n A 1 338 ILE 338 338 338 ILE ILE A . n A 1 339 LEU 339 339 339 LEU LEU A . n A 1 340 ASN 340 340 340 ASN ASN A . n A 1 341 PHE 341 341 341 PHE PHE A . n A 1 342 THR 342 342 342 THR THR A . n A 1 343 CYS 343 343 343 CYS CYS A . n A 1 344 LEU 344 344 344 LEU LEU A . n A 1 345 GLU 345 345 345 GLU GLU A . n A 1 346 MET 346 346 346 MET MET A . n A 1 347 ARG 347 347 347 ARG ARG A . n A 1 348 ASP 348 348 348 ASP ASP A . n A 1 349 SER 349 349 349 SER SER A . n A 1 350 GLU 350 350 350 GLU GLU A . n A 1 351 GLN 351 351 351 GLN GLN A . n A 1 352 PRO 352 352 352 PRO PRO A . n A 1 353 SER 353 353 353 SER SER A . n A 1 354 ASP 354 354 354 ASP ASP A . n A 1 355 ALA 355 355 355 ALA ALA A . n A 1 356 LYS 356 356 356 LYS LYS A . n A 1 357 SER 357 357 357 SER SER A . n A 1 358 GLY 358 358 358 GLY GLY A . n A 1 359 PRO 359 359 359 PRO PRO A . n A 1 360 GLN 360 360 360 GLN GLN A . n A 1 361 GLU 361 361 361 GLU GLU A . n A 1 362 LEU 362 362 362 LEU LEU A . n A 1 363 VAL 363 363 363 VAL VAL A . n A 1 364 GLN 364 364 364 GLN GLN A . n A 1 365 GLN 365 365 365 GLN GLN A . n A 1 366 VAL 366 366 366 VAL VAL A . n A 1 367 LEU 367 367 367 LEU LEU A . n A 1 368 SER 368 368 368 SER SER A . n A 1 369 GLY 369 369 369 GLY GLY A . n A 1 370 GLY 370 370 370 GLY GLY A . n A 1 371 TRP 371 371 371 TRP TRP A . n A 1 372 ARG 372 372 372 ARG ARG A . n A 1 373 GLU 373 373 373 GLU GLU A . n A 1 374 ASP 374 374 374 ASP ASP A . n A 1 375 ILE 375 375 375 ILE ILE A . n A 1 376 ARG 376 376 376 ARG ARG A . n A 1 377 VAL 377 377 377 VAL VAL A . n A 1 378 ALA 378 378 378 ALA ALA A . n A 1 379 GLY 379 379 379 GLY GLY A . n A 1 380 GLU 380 380 380 GLU GLU A . n A 1 381 ASN 381 381 381 ASN ASN A . n A 1 382 ALA 382 382 382 ALA ALA A . n A 1 383 LEU 383 383 383 LEU LEU A . n A 1 384 PRO 384 384 384 PRO PRO A . n A 1 385 ARG 385 385 385 ARG ARG A . n A 1 386 TYR 386 386 386 TYR TYR A . n A 1 387 ASP 387 387 387 ASP ASP A . n A 1 388 ALA 388 388 388 ALA ALA A . n A 1 389 THR 389 389 389 THR THR A . n A 1 390 ALA 390 390 390 ALA ALA A . n A 1 391 TYR 391 391 391 TYR TYR A . n A 1 392 ASN 392 392 392 ASN ASN A . n A 1 393 GLN 393 393 393 GLN GLN A . n A 1 394 ILE 394 394 394 ILE ILE A . n A 1 395 ILE 395 395 395 ILE ILE A . n A 1 396 LEU 396 396 396 LEU LEU A . n A 1 397 ASN 397 397 397 ASN ASN A . n A 1 398 ALA 398 398 398 ALA ALA A . n A 1 399 LYS 399 399 399 LYS LYS A . n A 1 400 PRO 400 400 400 PRO PRO A . n A 1 401 GLN 401 401 401 GLN GLN A . n A 1 402 GLY 402 402 402 GLY GLY A . n A 1 403 VAL 403 403 403 VAL VAL A . n A 1 404 ASN 404 404 404 ASN ASN A . n A 1 405 ASN 405 405 405 ASN ASN A . n A 1 406 ASN 406 406 406 ASN ASN A . n A 1 407 GLY 407 407 407 GLY GLY A . n A 1 408 PRO 408 408 408 PRO PRO A . n A 1 409 PRO 409 409 409 PRO PRO A . n A 1 410 LYS 410 410 410 LYS LYS A . n A 1 411 LEU 411 411 411 LEU LEU A . n A 1 412 SER 412 412 412 SER SER A . n A 1 413 MET 413 413 413 MET MET A . n A 1 414 PHE 414 414 414 PHE PHE A . n A 1 415 GLY 415 415 415 GLY GLY A . n A 1 416 VAL 416 416 416 VAL VAL A . n A 1 417 THR 417 417 417 THR THR A . n A 1 418 TYR 418 418 418 TYR TYR A . n A 1 419 LEU 419 419 419 LEU LEU A . n A 1 420 ARG 420 420 420 ARG ARG A . n A 1 421 LEU 421 421 421 LEU LEU A . n A 1 422 SER 422 422 422 SER SER A . n A 1 423 ASP 423 423 423 ASP ASP A . n A 1 424 ASP 424 424 424 ASP ASP A . n A 1 425 LEU 425 425 425 LEU LEU A . n A 1 426 LEU 426 426 426 LEU LEU A . n A 1 427 GLN 427 427 427 GLN GLN A . n A 1 428 LYS 428 428 428 LYS LYS A . n A 1 429 SER 429 429 429 SER SER A . n A 1 430 ASN 430 430 430 ASN ASN A . n A 1 431 PHE 431 431 431 PHE PHE A . n A 1 432 ASN 432 432 432 ASN ASN A . n A 1 433 ILE 433 433 433 ILE ILE A . n A 1 434 PHE 434 434 434 PHE PHE A . n A 1 435 LYS 435 435 435 LYS LYS A . n A 1 436 LYS 436 436 436 LYS LYS A . n A 1 437 PHE 437 437 437 PHE PHE A . n A 1 438 VAL 438 438 438 VAL VAL A . n A 1 439 LEU 439 439 439 LEU LEU A . n A 1 440 LYS 440 440 440 LYS LYS A . n A 1 441 MET 441 441 441 MET MET A . n A 1 442 HIS 442 442 442 HIS HIS A . n A 1 443 ALA 443 443 443 ALA ALA A . n A 1 444 ASP 444 444 444 ASP ASP A . n A 1 445 GLN 445 445 445 GLN GLN A . n A 1 446 ASP 446 446 446 ASP ASP A . n A 1 447 TYR 447 447 447 TYR TYR A . n A 1 448 CYS 448 448 448 CYS CYS A . n A 1 449 ALA 449 449 449 ALA ALA A . n A 1 450 ASN 450 450 450 ASN ASN A . n A 1 451 PRO 451 451 451 PRO PRO A . n A 1 452 GLN 452 452 452 GLN GLN A . n A 1 453 LYS 453 453 453 LYS LYS A . n A 1 454 TYR 454 454 454 TYR TYR A . n A 1 455 ASN 455 455 455 ASN ASN A . n A 1 456 HIS 456 456 456 HIS HIS A . n A 1 457 ALA 457 457 457 ALA ALA A . n A 1 458 ILE 458 458 458 ILE ILE A . n A 1 459 THR 459 459 459 THR THR A . n A 1 460 PRO 460 460 460 PRO PRO A . n A 1 461 LEU 461 461 461 LEU LEU A . n A 1 462 LYS 462 462 462 LYS LYS A . n A 1 463 PRO 463 463 463 PRO PRO A . n A 1 464 SER 464 464 464 SER SER A . n A 1 465 ALA 465 465 465 ALA ALA A . n A 1 466 PRO 466 466 466 PRO PRO A . n A 1 467 LYS 467 467 467 LYS LYS A . n A 1 468 ILE 468 468 468 ILE ILE A . n A 1 469 PRO 469 469 469 PRO PRO A . n A 1 470 ILE 470 470 470 ILE ILE A . n A 1 471 GLU 471 471 471 GLU GLU A . n A 1 472 VAL 472 472 472 VAL VAL A . n A 1 473 LEU 473 473 473 LEU LEU A . n A 1 474 LEU 474 474 474 LEU LEU A . n A 1 475 GLU 475 475 475 GLU GLU A . n A 1 476 ALA 476 476 476 ALA ALA A . n A 1 477 THR 477 477 477 THR THR A . n A 1 478 LYS 478 478 478 LYS LYS A . n A 1 479 PRO 479 479 479 PRO PRO A . n A 1 480 THR 480 480 480 THR THR A . n A 1 481 LEU 481 481 481 LEU LEU A . n A 1 482 PRO 482 482 482 PRO PRO A . n A 1 483 PHE 483 483 483 PHE PHE A . n A 1 484 PRO 484 484 484 PRO PRO A . n A 1 485 TRP 485 485 485 TRP TRP A . n A 1 486 LEU 486 486 486 LEU LEU A . n A 1 487 PRO 487 487 487 PRO PRO A . n A 1 488 GLU 488 488 488 GLU GLU A . n A 1 489 THR 489 489 489 THR THR A . n A 1 490 ASP 490 490 490 ASP ASP A . n A 1 491 MET 491 491 491 MET MET A . n A 1 492 LYS 492 492 492 LYS LYS A . n A 1 493 VAL 493 493 493 VAL VAL A . n A 1 494 ASP 494 494 494 ASP ASP A . n A 1 495 GLY 495 495 495 GLY GLY A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 RR7 1 B RR7 1 ? DOM 496 n B 2 GLC 2 B GLC 2 ? DOM 496 n C 2 RR7 1 C RR7 1 ? DOM 498 n C 2 GLC 2 C GLC 2 ? DOM 498 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 SO4 1 860 860 SO4 SO4 A . E 4 HOH 1 505 505 HOH HOH A . E 4 HOH 2 506 506 HOH HOH A . E 4 HOH 3 508 508 HOH HOH A . E 4 HOH 4 509 509 HOH HOH A . E 4 HOH 5 510 510 HOH HOH A . E 4 HOH 6 511 511 HOH HOH A . E 4 HOH 7 512 512 HOH HOH A . E 4 HOH 8 513 513 HOH HOH A . E 4 HOH 9 514 514 HOH HOH A . E 4 HOH 10 516 516 HOH HOH A . E 4 HOH 11 517 517 HOH HOH A . E 4 HOH 12 519 519 HOH HOH A . E 4 HOH 13 520 520 HOH HOH A . E 4 HOH 14 521 521 HOH HOH A . E 4 HOH 15 522 522 HOH HOH A . E 4 HOH 16 523 523 HOH HOH A . E 4 HOH 17 524 524 HOH HOH A . E 4 HOH 18 525 525 HOH HOH A . E 4 HOH 19 526 526 HOH HOH A . E 4 HOH 20 528 528 HOH HOH A . E 4 HOH 21 529 529 HOH HOH A . E 4 HOH 22 530 530 HOH HOH A . E 4 HOH 23 531 531 HOH HOH A . E 4 HOH 24 532 532 HOH HOH A . E 4 HOH 25 533 533 HOH HOH A . E 4 HOH 26 534 534 HOH HOH A . E 4 HOH 27 535 535 HOH HOH A . E 4 HOH 28 536 536 HOH HOH A . E 4 HOH 29 537 537 HOH HOH A . E 4 HOH 30 538 538 HOH HOH A . E 4 HOH 31 539 539 HOH HOH A . E 4 HOH 32 540 540 HOH HOH A . E 4 HOH 33 541 541 HOH HOH A . E 4 HOH 34 542 542 HOH HOH A . E 4 HOH 35 543 543 HOH HOH A . E 4 HOH 36 544 544 HOH HOH A . E 4 HOH 37 545 545 HOH HOH A . E 4 HOH 38 547 547 HOH HOH A . E 4 HOH 39 549 549 HOH HOH A . E 4 HOH 40 550 550 HOH HOH A . E 4 HOH 41 551 551 HOH HOH A . E 4 HOH 42 552 552 HOH HOH A . E 4 HOH 43 553 553 HOH HOH A . E 4 HOH 44 554 554 HOH HOH A . E 4 HOH 45 555 555 HOH HOH A . E 4 HOH 46 556 556 HOH HOH A . E 4 HOH 47 557 557 HOH HOH A . E 4 HOH 48 558 558 HOH HOH A . E 4 HOH 49 559 559 HOH HOH A . E 4 HOH 50 560 560 HOH HOH A . E 4 HOH 51 561 561 HOH HOH A . E 4 HOH 52 562 562 HOH HOH A . E 4 HOH 53 563 563 HOH HOH A . E 4 HOH 54 564 564 HOH HOH A . E 4 HOH 55 565 565 HOH HOH A . E 4 HOH 56 566 566 HOH HOH A . E 4 HOH 57 567 567 HOH HOH A . E 4 HOH 58 568 568 HOH HOH A . E 4 HOH 59 569 569 HOH HOH A . E 4 HOH 60 571 571 HOH HOH A . E 4 HOH 61 572 572 HOH HOH A . E 4 HOH 62 574 574 HOH HOH A . E 4 HOH 63 575 575 HOH HOH A . E 4 HOH 64 576 576 HOH HOH A . E 4 HOH 65 577 577 HOH HOH A . E 4 HOH 66 578 578 HOH HOH A . E 4 HOH 67 579 579 HOH HOH A . E 4 HOH 68 580 580 HOH HOH A . E 4 HOH 69 581 581 HOH HOH A . E 4 HOH 70 582 582 HOH HOH A . E 4 HOH 71 583 583 HOH HOH A . E 4 HOH 72 584 584 HOH HOH A . E 4 HOH 73 585 585 HOH HOH A . E 4 HOH 74 586 586 HOH HOH A . E 4 HOH 75 587 587 HOH HOH A . E 4 HOH 76 588 588 HOH HOH A . E 4 HOH 77 589 589 HOH HOH A . E 4 HOH 78 590 590 HOH HOH A . E 4 HOH 79 591 591 HOH HOH A . E 4 HOH 80 592 592 HOH HOH A . E 4 HOH 81 593 593 HOH HOH A . E 4 HOH 82 594 594 HOH HOH A . E 4 HOH 83 595 595 HOH HOH A . E 4 HOH 84 596 596 HOH HOH A . E 4 HOH 85 597 597 HOH HOH A . E 4 HOH 86 598 598 HOH HOH A . E 4 HOH 87 599 599 HOH HOH A . E 4 HOH 88 600 600 HOH HOH A . E 4 HOH 89 601 601 HOH HOH A . E 4 HOH 90 602 602 HOH HOH A . E 4 HOH 91 603 603 HOH HOH A . E 4 HOH 92 604 604 HOH HOH A . E 4 HOH 93 605 605 HOH HOH A . E 4 HOH 94 606 606 HOH HOH A . E 4 HOH 95 607 607 HOH HOH A . E 4 HOH 96 608 608 HOH HOH A . E 4 HOH 97 609 609 HOH HOH A . E 4 HOH 98 610 610 HOH HOH A . E 4 HOH 99 611 611 HOH HOH A . E 4 HOH 100 612 612 HOH HOH A . E 4 HOH 101 613 613 HOH HOH A . E 4 HOH 102 614 614 HOH HOH A . E 4 HOH 103 615 615 HOH HOH A . E 4 HOH 104 616 616 HOH HOH A . E 4 HOH 105 617 617 HOH HOH A . E 4 HOH 106 618 618 HOH HOH A . E 4 HOH 107 619 619 HOH HOH A . E 4 HOH 108 620 620 HOH HOH A . E 4 HOH 109 621 621 HOH HOH A . E 4 HOH 110 622 622 HOH HOH A . E 4 HOH 111 623 623 HOH HOH A . E 4 HOH 112 624 624 HOH HOH A . E 4 HOH 113 625 625 HOH HOH A . E 4 HOH 114 626 626 HOH HOH A . E 4 HOH 115 627 627 HOH HOH A . E 4 HOH 116 628 628 HOH HOH A . E 4 HOH 117 629 629 HOH HOH A . E 4 HOH 118 630 630 HOH HOH A . E 4 HOH 119 631 631 HOH HOH A . E 4 HOH 120 632 632 HOH HOH A . E 4 HOH 121 633 633 HOH HOH A . E 4 HOH 122 635 635 HOH HOH A . E 4 HOH 123 636 636 HOH HOH A . E 4 HOH 124 637 637 HOH HOH A . E 4 HOH 125 639 639 HOH HOH A . E 4 HOH 126 640 640 HOH HOH A . E 4 HOH 127 641 641 HOH HOH A . E 4 HOH 128 642 642 HOH HOH A . E 4 HOH 129 643 643 HOH HOH A . E 4 HOH 130 644 644 HOH HOH A . E 4 HOH 131 645 645 HOH HOH A . E 4 HOH 132 646 646 HOH HOH A . E 4 HOH 133 647 647 HOH HOH A . E 4 HOH 134 648 648 HOH HOH A . E 4 HOH 135 649 649 HOH HOH A . E 4 HOH 136 650 650 HOH HOH A . E 4 HOH 137 651 651 HOH HOH A . E 4 HOH 138 652 652 HOH HOH A . E 4 HOH 139 653 653 HOH HOH A . E 4 HOH 140 654 654 HOH HOH A . E 4 HOH 141 655 655 HOH HOH A . E 4 HOH 142 656 656 HOH HOH A . E 4 HOH 143 657 657 HOH HOH A . E 4 HOH 144 658 658 HOH HOH A . E 4 HOH 145 659 659 HOH HOH A . E 4 HOH 146 660 660 HOH HOH A . E 4 HOH 147 661 661 HOH HOH A . E 4 HOH 148 662 662 HOH HOH A . E 4 HOH 149 663 663 HOH HOH A . E 4 HOH 150 664 664 HOH HOH A . E 4 HOH 151 665 665 HOH HOH A . E 4 HOH 152 666 666 HOH HOH A . E 4 HOH 153 667 667 HOH HOH A . E 4 HOH 154 668 668 HOH HOH A . E 4 HOH 155 669 669 HOH HOH A . E 4 HOH 156 670 670 HOH HOH A . E 4 HOH 157 671 671 HOH HOH A . E 4 HOH 158 672 672 HOH HOH A . E 4 HOH 159 673 673 HOH HOH A . E 4 HOH 160 674 674 HOH HOH A . E 4 HOH 161 675 675 HOH HOH A . E 4 HOH 162 676 676 HOH HOH A . E 4 HOH 163 677 677 HOH HOH A . E 4 HOH 164 678 678 HOH HOH A . E 4 HOH 165 679 679 HOH HOH A . E 4 HOH 166 680 680 HOH HOH A . E 4 HOH 167 681 681 HOH HOH A . E 4 HOH 168 682 682 HOH HOH A . E 4 HOH 169 683 683 HOH HOH A . E 4 HOH 170 684 684 HOH HOH A . E 4 HOH 171 686 686 HOH HOH A . E 4 HOH 172 687 687 HOH HOH A . E 4 HOH 173 689 689 HOH HOH A . E 4 HOH 174 690 690 HOH HOH A . E 4 HOH 175 691 691 HOH HOH A . E 4 HOH 176 692 692 HOH HOH A . E 4 HOH 177 693 693 HOH HOH A . E 4 HOH 178 694 694 HOH HOH A . E 4 HOH 179 695 695 HOH HOH A . E 4 HOH 180 696 696 HOH HOH A . E 4 HOH 181 697 697 HOH HOH A . E 4 HOH 182 698 698 HOH HOH A . E 4 HOH 183 699 699 HOH HOH A . E 4 HOH 184 700 700 HOH HOH A . E 4 HOH 185 701 701 HOH HOH A . E 4 HOH 186 702 702 HOH HOH A . E 4 HOH 187 703 703 HOH HOH A . E 4 HOH 188 704 704 HOH HOH A . E 4 HOH 189 705 705 HOH HOH A . E 4 HOH 190 706 706 HOH HOH A . E 4 HOH 191 707 707 HOH HOH A . E 4 HOH 192 708 708 HOH HOH A . E 4 HOH 193 709 709 HOH HOH A . E 4 HOH 194 710 710 HOH HOH A . E 4 HOH 195 711 711 HOH HOH A . E 4 HOH 196 712 712 HOH HOH A . E 4 HOH 197 713 713 HOH HOH A . E 4 HOH 198 714 714 HOH HOH A . E 4 HOH 199 715 715 HOH HOH A . E 4 HOH 200 716 716 HOH HOH A . E 4 HOH 201 717 717 HOH HOH A . E 4 HOH 202 718 718 HOH HOH A . E 4 HOH 203 719 719 HOH HOH A . E 4 HOH 204 720 720 HOH HOH A . E 4 HOH 205 721 721 HOH HOH A . E 4 HOH 206 722 722 HOH HOH A . E 4 HOH 207 723 723 HOH HOH A . E 4 HOH 208 724 724 HOH HOH A . E 4 HOH 209 725 725 HOH HOH A . E 4 HOH 210 726 726 HOH HOH A . E 4 HOH 211 727 727 HOH HOH A . E 4 HOH 212 728 728 HOH HOH A . E 4 HOH 213 729 729 HOH HOH A . E 4 HOH 214 730 730 HOH HOH A . E 4 HOH 215 731 731 HOH HOH A . E 4 HOH 216 732 732 HOH HOH A . E 4 HOH 217 733 733 HOH HOH A . E 4 HOH 218 734 734 HOH HOH A . E 4 HOH 219 735 735 HOH HOH A . E 4 HOH 220 736 736 HOH HOH A . E 4 HOH 221 737 737 HOH HOH A . E 4 HOH 222 738 738 HOH HOH A . E 4 HOH 223 739 739 HOH HOH A . E 4 HOH 224 740 740 HOH HOH A . E 4 HOH 225 741 741 HOH HOH A . E 4 HOH 226 742 742 HOH HOH A . E 4 HOH 227 743 743 HOH HOH A . E 4 HOH 228 744 744 HOH HOH A . E 4 HOH 229 745 745 HOH HOH A . E 4 HOH 230 746 746 HOH HOH A . E 4 HOH 231 747 747 HOH HOH A . E 4 HOH 232 748 748 HOH HOH A . E 4 HOH 233 749 749 HOH HOH A . E 4 HOH 234 750 750 HOH HOH A . E 4 HOH 235 751 751 HOH HOH A . E 4 HOH 236 752 752 HOH HOH A . E 4 HOH 237 753 753 HOH HOH A . E 4 HOH 238 754 754 HOH HOH A . E 4 HOH 239 755 755 HOH HOH A . E 4 HOH 240 756 756 HOH HOH A . E 4 HOH 241 757 757 HOH HOH A . E 4 HOH 242 758 758 HOH HOH A . E 4 HOH 243 759 759 HOH HOH A . E 4 HOH 244 760 760 HOH HOH A . E 4 HOH 245 761 761 HOH HOH A . E 4 HOH 246 762 762 HOH HOH A . E 4 HOH 247 763 763 HOH HOH A . E 4 HOH 248 764 764 HOH HOH A . E 4 HOH 249 765 765 HOH HOH A . E 4 HOH 250 766 766 HOH HOH A . E 4 HOH 251 767 767 HOH HOH A . E 4 HOH 252 768 768 HOH HOH A . E 4 HOH 253 769 769 HOH HOH A . E 4 HOH 254 770 770 HOH HOH A . E 4 HOH 255 771 771 HOH HOH A . E 4 HOH 256 772 772 HOH HOH A . E 4 HOH 257 773 773 HOH HOH A . E 4 HOH 258 774 774 HOH HOH A . E 4 HOH 259 776 776 HOH HOH A . E 4 HOH 260 777 777 HOH HOH A . E 4 HOH 261 778 778 HOH HOH A . E 4 HOH 262 779 779 HOH HOH A . E 4 HOH 263 780 780 HOH HOH A . E 4 HOH 264 781 781 HOH HOH A . E 4 HOH 265 782 782 HOH HOH A . E 4 HOH 266 783 783 HOH HOH A . E 4 HOH 267 784 784 HOH HOH A . E 4 HOH 268 785 785 HOH HOH A . E 4 HOH 269 786 786 HOH HOH A . E 4 HOH 270 787 787 HOH HOH A . E 4 HOH 271 788 788 HOH HOH A . E 4 HOH 272 789 789 HOH HOH A . E 4 HOH 273 790 790 HOH HOH A . E 4 HOH 274 791 791 HOH HOH A . E 4 HOH 275 792 792 HOH HOH A . E 4 HOH 276 793 793 HOH HOH A . E 4 HOH 277 795 795 HOH HOH A . E 4 HOH 278 796 796 HOH HOH A . E 4 HOH 279 797 797 HOH HOH A . E 4 HOH 280 798 798 HOH HOH A . E 4 HOH 281 799 799 HOH HOH A . E 4 HOH 282 800 800 HOH HOH A . E 4 HOH 283 801 801 HOH HOH A . E 4 HOH 284 802 802 HOH HOH A . E 4 HOH 285 803 803 HOH HOH A . E 4 HOH 286 804 804 HOH HOH A . E 4 HOH 287 805 805 HOH HOH A . E 4 HOH 288 806 806 HOH HOH A . E 4 HOH 289 807 807 HOH HOH A . E 4 HOH 290 808 808 HOH HOH A . E 4 HOH 291 809 809 HOH HOH A . E 4 HOH 292 810 810 HOH HOH A . E 4 HOH 293 811 811 HOH HOH A . E 4 HOH 294 812 812 HOH HOH A . E 4 HOH 295 813 813 HOH HOH A . E 4 HOH 296 814 814 HOH HOH A . E 4 HOH 297 815 815 HOH HOH A . E 4 HOH 298 816 816 HOH HOH A . E 4 HOH 299 817 817 HOH HOH A . E 4 HOH 300 818 818 HOH HOH A . E 4 HOH 301 819 819 HOH HOH A . E 4 HOH 302 820 820 HOH HOH A . E 4 HOH 303 821 821 HOH HOH A . E 4 HOH 304 822 822 HOH HOH A . E 4 HOH 305 823 823 HOH HOH A . E 4 HOH 306 825 825 HOH HOH A . E 4 HOH 307 826 826 HOH HOH A . E 4 HOH 308 827 827 HOH HOH A . E 4 HOH 309 828 828 HOH HOH A . E 4 HOH 310 829 829 HOH HOH A . E 4 HOH 311 830 830 HOH HOH A . E 4 HOH 312 831 831 HOH HOH A . E 4 HOH 313 832 832 HOH HOH A . E 4 HOH 314 833 833 HOH HOH A . E 4 HOH 315 834 834 HOH HOH A . E 4 HOH 316 835 835 HOH HOH A . E 4 HOH 317 836 836 HOH HOH A . E 4 HOH 318 837 837 HOH HOH A . E 4 HOH 319 838 838 HOH HOH A . E 4 HOH 320 840 840 HOH HOH A . E 4 HOH 321 841 841 HOH HOH A . E 4 HOH 322 842 842 HOH HOH A . E 4 HOH 323 843 843 HOH HOH A . E 4 HOH 324 844 844 HOH HOH A . E 4 HOH 325 845 845 HOH HOH A . E 4 HOH 326 846 846 HOH HOH A . E 4 HOH 327 847 847 HOH HOH A . E 4 HOH 328 848 848 HOH HOH A . E 4 HOH 329 849 849 HOH HOH A . E 4 HOH 330 850 850 HOH HOH A . E 4 HOH 331 851 851 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLY 495 ? CA ? A GLY 495 CA 2 1 Y 1 A GLY 495 ? C ? A GLY 495 C 3 1 Y 1 A GLY 495 ? O ? A GLY 495 O # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 TNT refinement . ? 2 X-PLOR refinement . ? 3 X-PLOR phasing . ? 4 # _cell.entry_id 1BYD _cell.length_a 86.200 _cell.length_b 86.200 _cell.length_c 144.200 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BYD _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # _exptl.entry_id 1BYD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.76 _exptl_crystal.density_percent_sol 55.38 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1BYD _refine.ls_number_reflns_obs 46480 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 9.0 _refine.ls_d_res_high 2.2 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1450000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1450000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3925 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 49 _refine_hist.number_atoms_solvent 331 _refine_hist.number_atoms_total 4305 _refine_hist.d_res_high 2.2 _refine_hist.d_res_low 9.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.018 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.298 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1BYD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1BYD _struct.title ;CRYSTAL STRUCTURES OF SOYBEAN BETA-AMYLASE REACTED WITH BETA-MALTOSE AND MALTAL: ACTIVE SITE COMPONENTS AND THEIR APPARENT ROLE IN CATALYSIS ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1BYD _struct_keywords.pdbx_keywords 'HYDROLASE(O-GLYCOSYL)' _struct_keywords.text 'HYDROLASE(O-GLYCOSYL)' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code AMYB_SOYBN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P10538 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;ATSDSNMLLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLFQLVQ ECGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKS FRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPRIGEFQCYDKYLKADFKAAVARAGHPEWELPDDAGKYND VPESTGFFKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLN DRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNAKP QGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPKIPIEVLLEATKPT LPFPWLPETDMKVDG ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1BYD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 495 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P10538 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 495 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 495 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A1 PRO A 32 ? ALA A 45 ? PRO A 32 ALA A 45 1 ? 14 HELX_P HELX_P2 A2 ARG A 70 ? GLU A 81 ? ARG A 70 GLU A 81 1 ? 12 HELX_P HELX_P3 A3 GLN A 109 ? SER A 117 ? GLN A 109 SER A 117 1 ? 9 HELX_P HELX_P4 A4 ALA A 150 ? GLU A 170 ? ALA A 150 GLU A 170 1 ? 21 HELX_P HELX_P5 A5 LYS A 211 ? ALA A 224 ? LYS A 211 ALA A 224 1 ? 14 HELX_P HELX_P6 A6 LYS A 258 ? ALA A 284 ? LYS A 258 ALA A 284 1 ? 27 HELX_P HELX_P7 A7 ALA A 309 ? THR A 313 ? ALA A 309 THR A 313 1 ? 5 HELX_P HELX_P8 A8 TYR A 325 ? ARG A 334 ? TYR A 325 ARG A 334 1 ? 10 HELX_P HELX_P9 A9 PRO A 359 ? GLU A 373 ? PRO A 359 GLU A 373 1 ? 15 HELX_P HELX_P10 A10 ASP A 387 ? LYS A 399 ? ASP A 387 LYS A 399 1 ? 13 HELX_P HELX_P11 A11 GLN A 427 ? HIS A 442 ? GLN A 427 HIS A 442 1 ? 16 HELX_P HELX_P12 A12 PRO A 469 ? GLU A 475 ? PRO A 469 GLU A 475 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B RR7 . O4 ? ? ? 1_555 B GLC . C1 ? ? B RR7 1 B GLC 2 1_555 ? ? ? ? ? ? ? 1.407 sing ? covale2 covale both ? C RR7 . O4 ? ? ? 1_555 C GLC . C1 ? ? C RR7 1 C GLC 2 1_555 ? ? ? ? ? ? ? 1.441 sing ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id S1 _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense S1 1 2 ? parallel S1 2 3 ? parallel S1 3 4 ? parallel S1 4 5 ? parallel S1 5 6 ? parallel S1 6 7 ? parallel S1 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id S1 1 PRO A 13 ? LEU A 20 ? PRO A 13 LEU A 20 S1 2 GLY A 49 ? TRP A 55 ? GLY A 49 TRP A 55 S1 3 THR A 85 ? SER A 91 ? THR A 85 SER A 91 S1 4 ASP A 176 ? LEU A 181 ? ASP A 176 LEU A 181 S1 5 VAL A 290 ? VAL A 296 ? VAL A 290 VAL A 296 S1 6 ALA A 337 ? CYS A 343 ? ALA A 337 CYS A 343 S1 7 ILE A 375 ? ASN A 381 ? ILE A 375 ASN A 381 S1 8 GLY A 415 ? LEU A 419 ? GLY A 415 LEU A 419 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id S1 1 2 N LEU A 18 ? N LEU A 18 O MET A 51 ? O MET A 51 S1 2 3 N VAL A 52 ? N VAL A 52 O GLN A 87 ? O GLN A 87 S1 3 4 N ALA A 88 ? N ALA A 88 O ASP A 176 ? O ASP A 176 S1 4 5 N ILE A 177 ? N ILE A 177 O LYS A 291 ? O LYS A 291 S1 5 6 N ILE A 294 ? N ILE A 294 O ILE A 338 ? O ILE A 338 S1 6 7 N PHE A 341 ? N PHE A 341 O ALA A 378 ? O ALA A 378 S1 7 8 O GLY A 379 ? O GLY A 379 N THR A 417 ? N THR A 417 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 PHE _pdbx_validate_close_contact.auth_seq_id_1 200 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 202 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.01 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 800 ? ? 1_555 O A HOH 800 ? ? 6_555 2.01 2 1 OH A TYR 212 ? ? 1_555 O A HOH 651 ? ? 6_655 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A GLU 30 ? ? OE1 A GLU 30 ? ? 1.336 1.252 0.084 0.011 N 2 1 CD A GLU 37 ? ? OE2 A GLU 37 ? ? 1.359 1.252 0.107 0.011 N 3 1 CD A GLU 60 ? ? OE2 A GLU 60 ? ? 1.339 1.252 0.087 0.011 N 4 1 CD A GLU 116 ? ? OE2 A GLU 116 ? ? 1.331 1.252 0.079 0.011 N 5 1 CD A GLU 152 ? ? OE2 A GLU 152 ? ? 1.330 1.252 0.078 0.011 N 6 1 NE A ARG 162 ? ? CZ A ARG 162 ? ? 1.417 1.326 0.091 0.013 N 7 1 CD A GLU 163 ? ? OE1 A GLU 163 ? ? 1.371 1.252 0.119 0.011 N 8 1 CD A GLU 170 ? ? OE1 A GLU 170 ? ? 1.377 1.252 0.125 0.011 N 9 1 CD A GLU 186 ? ? OE2 A GLU 186 ? ? 1.340 1.252 0.088 0.011 N 10 1 CD A GLU 205 ? ? OE1 A GLU 205 ? ? 1.334 1.252 0.082 0.011 N 11 1 CD A GLU 228 ? ? OE2 A GLU 228 ? ? 1.323 1.252 0.071 0.011 N 12 1 CD A GLU 243 ? ? OE1 A GLU 243 ? ? 1.344 1.252 0.092 0.011 N 13 1 CD A GLU 257 ? ? OE2 A GLU 257 ? ? 1.365 1.252 0.113 0.011 N 14 1 CD A GLU 280 ? ? OE1 A GLU 280 ? ? 1.319 1.252 0.067 0.011 N 15 1 CD A GLU 306 ? ? OE2 A GLU 306 ? ? 1.360 1.252 0.108 0.011 N 16 1 CD A GLU 311 ? ? OE2 A GLU 311 ? ? 1.321 1.252 0.069 0.011 N 17 1 CD A GLU 471 ? ? OE2 A GLU 471 ? ? 1.348 1.252 0.096 0.011 N 18 1 CD A GLU 475 ? ? OE1 A GLU 475 ? ? 1.362 1.252 0.110 0.011 N 19 1 CD A GLU 488 ? ? OE2 A GLU 488 ? ? 1.354 1.252 0.102 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG A MET 7 ? ? SD A MET 7 ? ? CE A MET 7 ? ? 109.99 100.20 9.79 1.60 N 2 1 CB A ASP 48 ? ? CG A ASP 48 ? ? OD1 A ASP 48 ? ? 124.63 118.30 6.33 0.90 N 3 1 CB A ASP 68 ? ? CG A ASP 68 ? ? OD1 A ASP 68 ? ? 123.73 118.30 5.43 0.90 N 4 1 NE A ARG 73 ? ? CZ A ARG 73 ? ? NH1 A ARG 73 ? ? 123.32 120.30 3.02 0.50 N 5 1 CD A ARG 130 ? ? NE A ARG 130 ? ? CZ A ARG 130 ? ? 132.24 123.60 8.64 1.40 N 6 1 NE A ARG 130 ? ? CZ A ARG 130 ? ? NH1 A ARG 130 ? ? 125.63 120.30 5.33 0.50 N 7 1 CB A ASP 140 ? ? CG A ASP 140 ? ? OD2 A ASP 140 ? ? 124.49 118.30 6.19 0.90 N 8 1 CB A ASP 156 ? ? CG A ASP 156 ? ? OD1 A ASP 156 ? ? 110.78 118.30 -7.52 0.90 N 9 1 CB A ASP 156 ? ? CG A ASP 156 ? ? OD2 A ASP 156 ? ? 125.70 118.30 7.40 0.90 N 10 1 NE A ARG 162 ? ? CZ A ARG 162 ? ? NH1 A ARG 162 ? ? 124.42 120.30 4.12 0.50 N 11 1 CB A ASP 176 ? ? CG A ASP 176 ? ? OD1 A ASP 176 ? ? 124.57 118.30 6.27 0.90 N 12 1 CB A ASP 176 ? ? CG A ASP 176 ? ? OD2 A ASP 176 ? ? 111.81 118.30 -6.49 0.90 N 13 1 CB A ARG 202 ? ? CA A ARG 202 ? ? C A ARG 202 ? ? 126.84 110.40 16.44 2.00 N 14 1 NE A ARG 202 ? ? CZ A ARG 202 ? ? NH2 A ARG 202 ? ? 124.17 120.30 3.87 0.50 N 15 1 CB A ASP 233 ? ? CG A ASP 233 ? ? OD1 A ASP 233 ? ? 125.96 118.30 7.66 0.90 N 16 1 CB A ASP 233 ? ? CG A ASP 233 ? ? OD2 A ASP 233 ? ? 107.78 118.30 -10.52 0.90 N 17 1 CB A ASP 240 ? ? CG A ASP 240 ? ? OD1 A ASP 240 ? ? 110.69 118.30 -7.61 0.90 N 18 1 CB A ASP 240 ? ? CG A ASP 240 ? ? OD2 A ASP 240 ? ? 125.85 118.30 7.55 0.90 N 19 1 CB A ASP 279 ? ? CG A ASP 279 ? ? OD1 A ASP 279 ? ? 107.71 118.30 -10.59 0.90 N 20 1 CB A ASP 279 ? ? CG A ASP 279 ? ? OD2 A ASP 279 ? ? 126.75 118.30 8.45 0.90 N 21 1 CB A TYR 316 ? ? CG A TYR 316 ? ? CD2 A TYR 316 ? ? 116.90 121.00 -4.10 0.60 N 22 1 CB A TYR 316 ? ? CG A TYR 316 ? ? CD1 A TYR 316 ? ? 125.96 121.00 4.96 0.60 N 23 1 CB A ASP 321 ? ? CG A ASP 321 ? ? OD1 A ASP 321 ? ? 127.77 118.30 9.47 0.90 N 24 1 CB A ASP 321 ? ? CG A ASP 321 ? ? OD2 A ASP 321 ? ? 110.91 118.30 -7.39 0.90 N 25 1 NE A ARG 334 ? ? CZ A ARG 334 ? ? NH1 A ARG 334 ? ? 124.22 120.30 3.92 0.50 N 26 1 NE A ARG 334 ? ? CZ A ARG 334 ? ? NH2 A ARG 334 ? ? 114.31 120.30 -5.99 0.50 N 27 1 NE A ARG 372 ? ? CZ A ARG 372 ? ? NH2 A ARG 372 ? ? 117.16 120.30 -3.14 0.50 N 28 1 NE A ARG 376 ? ? CZ A ARG 376 ? ? NH1 A ARG 376 ? ? 124.06 120.30 3.76 0.50 N 29 1 NE A ARG 420 ? ? CZ A ARG 420 ? ? NH2 A ARG 420 ? ? 123.94 120.30 3.64 0.50 N 30 1 CB A ASP 423 ? ? CG A ASP 423 ? ? OD2 A ASP 423 ? ? 110.26 118.30 -8.04 0.90 N 31 1 N A THR 459 ? ? CA A THR 459 ? ? CB A THR 459 ? ? 98.50 110.30 -11.80 1.90 N 32 1 CB A ASP 494 ? ? CG A ASP 494 ? ? OD2 A ASP 494 ? ? 111.74 118.30 -6.56 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 6 ? ? -63.88 -178.67 2 1 LEU A 8 ? ? -46.68 -17.09 3 1 ASP A 101 ? ? -64.36 94.07 4 1 TYR A 134 ? ? -173.17 144.56 5 1 PHE A 145 ? ? -106.03 78.82 6 1 ALA A 184 ? ? 51.65 15.96 7 1 PHE A 200 ? ? -38.40 -94.26 8 1 PRO A 201 ? ? -60.71 32.07 9 1 ASP A 374 ? ? 70.78 44.04 10 1 ARG A 420 ? ? 74.05 142.72 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 CB ? A THR 256 ? 'WRONG HAND' . 2 1 C1 ? C RR7 1 ? 'WRONG HAND' . # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 VAL A 25 ? ? 10.05 2 1 ASN A 118 ? ? 11.36 # _pdbx_molecule_features.prd_id PRD_900048 _pdbx_molecule_features.name 2-deoxy-maltose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Substrate analog' _pdbx_molecule_features.details oligosaccharide # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_900048 B 2 PRD_900048 C # _pdbx_entry_details.entry_id 1BYD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THIS STRUCTURE CONTAINS TWO 2'-DEOXYMALTOSE MOLECULES, REPRESENTED AS DOM 496 AND DOM 498. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 1 ? A ALA 1 2 1 Y 1 A THR 2 ? A THR 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A ASP 4 ? A ASP 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLC C1 C N S 88 GLC C2 C N R 89 GLC C3 C N S 90 GLC C4 C N S 91 GLC C5 C N R 92 GLC C6 C N N 93 GLC O1 O N N 94 GLC O2 O N N 95 GLC O3 O N N 96 GLC O4 O N N 97 GLC O5 O N N 98 GLC O6 O N N 99 GLC H1 H N N 100 GLC H2 H N N 101 GLC H3 H N N 102 GLC H4 H N N 103 GLC H5 H N N 104 GLC H61 H N N 105 GLC H62 H N N 106 GLC HO1 H N N 107 GLC HO2 H N N 108 GLC HO3 H N N 109 GLC HO4 H N N 110 GLC HO6 H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 PHE N N N N 274 PHE CA C N S 275 PHE C C N N 276 PHE O O N N 277 PHE CB C N N 278 PHE CG C Y N 279 PHE CD1 C Y N 280 PHE CD2 C Y N 281 PHE CE1 C Y N 282 PHE CE2 C Y N 283 PHE CZ C Y N 284 PHE OXT O N N 285 PHE H H N N 286 PHE H2 H N N 287 PHE HA H N N 288 PHE HB2 H N N 289 PHE HB3 H N N 290 PHE HD1 H N N 291 PHE HD2 H N N 292 PHE HE1 H N N 293 PHE HE2 H N N 294 PHE HZ H N N 295 PHE HXT H N N 296 PRO N N N N 297 PRO CA C N S 298 PRO C C N N 299 PRO O O N N 300 PRO CB C N N 301 PRO CG C N N 302 PRO CD C N N 303 PRO OXT O N N 304 PRO H H N N 305 PRO HA H N N 306 PRO HB2 H N N 307 PRO HB3 H N N 308 PRO HG2 H N N 309 PRO HG3 H N N 310 PRO HD2 H N N 311 PRO HD3 H N N 312 PRO HXT H N N 313 RR7 C1 C N R 314 RR7 C2 C N N 315 RR7 C3 C N R 316 RR7 C4 C N S 317 RR7 C5 C N R 318 RR7 C6 C N N 319 RR7 O1 O N N 320 RR7 O3 O N N 321 RR7 O4 O N N 322 RR7 O5 O N N 323 RR7 O6 O N N 324 RR7 H1 H N N 325 RR7 H21 H N N 326 RR7 H22 H N N 327 RR7 H3 H N N 328 RR7 H4 H N N 329 RR7 H5 H N N 330 RR7 H61 H N N 331 RR7 H62 H N N 332 RR7 HO1 H N N 333 RR7 HO3 H N N 334 RR7 HO4 H N N 335 RR7 HO6 H N N 336 SER N N N N 337 SER CA C N S 338 SER C C N N 339 SER O O N N 340 SER CB C N N 341 SER OG O N N 342 SER OXT O N N 343 SER H H N N 344 SER H2 H N N 345 SER HA H N N 346 SER HB2 H N N 347 SER HB3 H N N 348 SER HG H N N 349 SER HXT H N N 350 SO4 S S N N 351 SO4 O1 O N N 352 SO4 O2 O N N 353 SO4 O3 O N N 354 SO4 O4 O N N 355 THR N N N N 356 THR CA C N S 357 THR C C N N 358 THR O O N N 359 THR CB C N R 360 THR OG1 O N N 361 THR CG2 C N N 362 THR OXT O N N 363 THR H H N N 364 THR H2 H N N 365 THR HA H N N 366 THR HB H N N 367 THR HG1 H N N 368 THR HG21 H N N 369 THR HG22 H N N 370 THR HG23 H N N 371 THR HXT H N N 372 TRP N N N N 373 TRP CA C N S 374 TRP C C N N 375 TRP O O N N 376 TRP CB C N N 377 TRP CG C Y N 378 TRP CD1 C Y N 379 TRP CD2 C Y N 380 TRP NE1 N Y N 381 TRP CE2 C Y N 382 TRP CE3 C Y N 383 TRP CZ2 C Y N 384 TRP CZ3 C Y N 385 TRP CH2 C Y N 386 TRP OXT O N N 387 TRP H H N N 388 TRP H2 H N N 389 TRP HA H N N 390 TRP HB2 H N N 391 TRP HB3 H N N 392 TRP HD1 H N N 393 TRP HE1 H N N 394 TRP HE3 H N N 395 TRP HZ2 H N N 396 TRP HZ3 H N N 397 TRP HH2 H N N 398 TRP HXT H N N 399 TYR N N N N 400 TYR CA C N S 401 TYR C C N N 402 TYR O O N N 403 TYR CB C N N 404 TYR CG C Y N 405 TYR CD1 C Y N 406 TYR CD2 C Y N 407 TYR CE1 C Y N 408 TYR CE2 C Y N 409 TYR CZ C Y N 410 TYR OH O N N 411 TYR OXT O N N 412 TYR H H N N 413 TYR H2 H N N 414 TYR HA H N N 415 TYR HB2 H N N 416 TYR HB3 H N N 417 TYR HD1 H N N 418 TYR HD2 H N N 419 TYR HE1 H N N 420 TYR HE2 H N N 421 TYR HH H N N 422 TYR HXT H N N 423 VAL N N N N 424 VAL CA C N S 425 VAL C C N N 426 VAL O O N N 427 VAL CB C N N 428 VAL CG1 C N N 429 VAL CG2 C N N 430 VAL OXT O N N 431 VAL H H N N 432 VAL H2 H N N 433 VAL HA H N N 434 VAL HB H N N 435 VAL HG11 H N N 436 VAL HG12 H N N 437 VAL HG13 H N N 438 VAL HG21 H N N 439 VAL HG22 H N N 440 VAL HG23 H N N 441 VAL HXT H N N 442 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLC C1 C2 sing N N 83 GLC C1 O1 sing N N 84 GLC C1 O5 sing N N 85 GLC C1 H1 sing N N 86 GLC C2 C3 sing N N 87 GLC C2 O2 sing N N 88 GLC C2 H2 sing N N 89 GLC C3 C4 sing N N 90 GLC C3 O3 sing N N 91 GLC C3 H3 sing N N 92 GLC C4 C5 sing N N 93 GLC C4 O4 sing N N 94 GLC C4 H4 sing N N 95 GLC C5 C6 sing N N 96 GLC C5 O5 sing N N 97 GLC C5 H5 sing N N 98 GLC C6 O6 sing N N 99 GLC C6 H61 sing N N 100 GLC C6 H62 sing N N 101 GLC O1 HO1 sing N N 102 GLC O2 HO2 sing N N 103 GLC O3 HO3 sing N N 104 GLC O4 HO4 sing N N 105 GLC O6 HO6 sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 HOH O H1 sing N N 174 HOH O H2 sing N N 175 ILE N CA sing N N 176 ILE N H sing N N 177 ILE N H2 sing N N 178 ILE CA C sing N N 179 ILE CA CB sing N N 180 ILE CA HA sing N N 181 ILE C O doub N N 182 ILE C OXT sing N N 183 ILE CB CG1 sing N N 184 ILE CB CG2 sing N N 185 ILE CB HB sing N N 186 ILE CG1 CD1 sing N N 187 ILE CG1 HG12 sing N N 188 ILE CG1 HG13 sing N N 189 ILE CG2 HG21 sing N N 190 ILE CG2 HG22 sing N N 191 ILE CG2 HG23 sing N N 192 ILE CD1 HD11 sing N N 193 ILE CD1 HD12 sing N N 194 ILE CD1 HD13 sing N N 195 ILE OXT HXT sing N N 196 LEU N CA sing N N 197 LEU N H sing N N 198 LEU N H2 sing N N 199 LEU CA C sing N N 200 LEU CA CB sing N N 201 LEU CA HA sing N N 202 LEU C O doub N N 203 LEU C OXT sing N N 204 LEU CB CG sing N N 205 LEU CB HB2 sing N N 206 LEU CB HB3 sing N N 207 LEU CG CD1 sing N N 208 LEU CG CD2 sing N N 209 LEU CG HG sing N N 210 LEU CD1 HD11 sing N N 211 LEU CD1 HD12 sing N N 212 LEU CD1 HD13 sing N N 213 LEU CD2 HD21 sing N N 214 LEU CD2 HD22 sing N N 215 LEU CD2 HD23 sing N N 216 LEU OXT HXT sing N N 217 LYS N CA sing N N 218 LYS N H sing N N 219 LYS N H2 sing N N 220 LYS CA C sing N N 221 LYS CA CB sing N N 222 LYS CA HA sing N N 223 LYS C O doub N N 224 LYS C OXT sing N N 225 LYS CB CG sing N N 226 LYS CB HB2 sing N N 227 LYS CB HB3 sing N N 228 LYS CG CD sing N N 229 LYS CG HG2 sing N N 230 LYS CG HG3 sing N N 231 LYS CD CE sing N N 232 LYS CD HD2 sing N N 233 LYS CD HD3 sing N N 234 LYS CE NZ sing N N 235 LYS CE HE2 sing N N 236 LYS CE HE3 sing N N 237 LYS NZ HZ1 sing N N 238 LYS NZ HZ2 sing N N 239 LYS NZ HZ3 sing N N 240 LYS OXT HXT sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 PHE N CA sing N N 261 PHE N H sing N N 262 PHE N H2 sing N N 263 PHE CA C sing N N 264 PHE CA CB sing N N 265 PHE CA HA sing N N 266 PHE C O doub N N 267 PHE C OXT sing N N 268 PHE CB CG sing N N 269 PHE CB HB2 sing N N 270 PHE CB HB3 sing N N 271 PHE CG CD1 doub Y N 272 PHE CG CD2 sing Y N 273 PHE CD1 CE1 sing Y N 274 PHE CD1 HD1 sing N N 275 PHE CD2 CE2 doub Y N 276 PHE CD2 HD2 sing N N 277 PHE CE1 CZ doub Y N 278 PHE CE1 HE1 sing N N 279 PHE CE2 CZ sing Y N 280 PHE CE2 HE2 sing N N 281 PHE CZ HZ sing N N 282 PHE OXT HXT sing N N 283 PRO N CA sing N N 284 PRO N CD sing N N 285 PRO N H sing N N 286 PRO CA C sing N N 287 PRO CA CB sing N N 288 PRO CA HA sing N N 289 PRO C O doub N N 290 PRO C OXT sing N N 291 PRO CB CG sing N N 292 PRO CB HB2 sing N N 293 PRO CB HB3 sing N N 294 PRO CG CD sing N N 295 PRO CG HG2 sing N N 296 PRO CG HG3 sing N N 297 PRO CD HD2 sing N N 298 PRO CD HD3 sing N N 299 PRO OXT HXT sing N N 300 RR7 O4 C4 sing N N 301 RR7 C1 C2 sing N N 302 RR7 C1 O1 sing N N 303 RR7 C1 O5 sing N N 304 RR7 C2 C3 sing N N 305 RR7 C3 O3 sing N N 306 RR7 C3 C4 sing N N 307 RR7 C4 C5 sing N N 308 RR7 C5 C6 sing N N 309 RR7 C5 O5 sing N N 310 RR7 C6 O6 sing N N 311 RR7 C1 H1 sing N N 312 RR7 C2 H21 sing N N 313 RR7 C2 H22 sing N N 314 RR7 C3 H3 sing N N 315 RR7 C4 H4 sing N N 316 RR7 C5 H5 sing N N 317 RR7 C6 H61 sing N N 318 RR7 C6 H62 sing N N 319 RR7 O1 HO1 sing N N 320 RR7 O3 HO3 sing N N 321 RR7 O6 HO6 sing N N 322 RR7 O4 HO4 sing N N 323 SER N CA sing N N 324 SER N H sing N N 325 SER N H2 sing N N 326 SER CA C sing N N 327 SER CA CB sing N N 328 SER CA HA sing N N 329 SER C O doub N N 330 SER C OXT sing N N 331 SER CB OG sing N N 332 SER CB HB2 sing N N 333 SER CB HB3 sing N N 334 SER OG HG sing N N 335 SER OXT HXT sing N N 336 SO4 S O1 doub N N 337 SO4 S O2 doub N N 338 SO4 S O3 sing N N 339 SO4 S O4 sing N N 340 THR N CA sing N N 341 THR N H sing N N 342 THR N H2 sing N N 343 THR CA C sing N N 344 THR CA CB sing N N 345 THR CA HA sing N N 346 THR C O doub N N 347 THR C OXT sing N N 348 THR CB OG1 sing N N 349 THR CB CG2 sing N N 350 THR CB HB sing N N 351 THR OG1 HG1 sing N N 352 THR CG2 HG21 sing N N 353 THR CG2 HG22 sing N N 354 THR CG2 HG23 sing N N 355 THR OXT HXT sing N N 356 TRP N CA sing N N 357 TRP N H sing N N 358 TRP N H2 sing N N 359 TRP CA C sing N N 360 TRP CA CB sing N N 361 TRP CA HA sing N N 362 TRP C O doub N N 363 TRP C OXT sing N N 364 TRP CB CG sing N N 365 TRP CB HB2 sing N N 366 TRP CB HB3 sing N N 367 TRP CG CD1 doub Y N 368 TRP CG CD2 sing Y N 369 TRP CD1 NE1 sing Y N 370 TRP CD1 HD1 sing N N 371 TRP CD2 CE2 doub Y N 372 TRP CD2 CE3 sing Y N 373 TRP NE1 CE2 sing Y N 374 TRP NE1 HE1 sing N N 375 TRP CE2 CZ2 sing Y N 376 TRP CE3 CZ3 doub Y N 377 TRP CE3 HE3 sing N N 378 TRP CZ2 CH2 doub Y N 379 TRP CZ2 HZ2 sing N N 380 TRP CZ3 CH2 sing Y N 381 TRP CZ3 HZ3 sing N N 382 TRP CH2 HH2 sing N N 383 TRP OXT HXT sing N N 384 TYR N CA sing N N 385 TYR N H sing N N 386 TYR N H2 sing N N 387 TYR CA C sing N N 388 TYR CA CB sing N N 389 TYR CA HA sing N N 390 TYR C O doub N N 391 TYR C OXT sing N N 392 TYR CB CG sing N N 393 TYR CB HB2 sing N N 394 TYR CB HB3 sing N N 395 TYR CG CD1 doub Y N 396 TYR CG CD2 sing Y N 397 TYR CD1 CE1 sing Y N 398 TYR CD1 HD1 sing N N 399 TYR CD2 CE2 doub Y N 400 TYR CD2 HD2 sing N N 401 TYR CE1 CZ doub Y N 402 TYR CE1 HE1 sing N N 403 TYR CE2 CZ sing Y N 404 TYR CE2 HE2 sing N N 405 TYR CZ OH sing N N 406 TYR OH HH sing N N 407 TYR OXT HXT sing N N 408 VAL N CA sing N N 409 VAL N H sing N N 410 VAL N H2 sing N N 411 VAL CA C sing N N 412 VAL CA CB sing N N 413 VAL CA HA sing N N 414 VAL C O doub N N 415 VAL C OXT sing N N 416 VAL CB CG1 sing N N 417 VAL CB CG2 sing N N 418 VAL CB HB sing N N 419 VAL CG1 HG11 sing N N 420 VAL CG1 HG12 sing N N 421 VAL CG1 HG13 sing N N 422 VAL CG2 HG21 sing N N 423 VAL CG2 HG22 sing N N 424 VAL CG2 HG23 sing N N 425 VAL OXT HXT sing N N 426 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 RR7 1 n 2 GLC 2 n # _atom_sites.entry_id 1BYD _atom_sites.fract_transf_matrix[1][1] 0.011601 _atom_sites.fract_transf_matrix[1][2] 0.006698 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013396 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006935 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text 'LEU 419 - ARG 420 OMEGA = 12.15 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION' # loop_ _atom_type.symbol C N O S # loop_