HEADER MEMBRANE PROTEIN 21-OCT-98 1BYY TITLE SODIUM CHANNEL IIA INACTIVATION GATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (SODIUM CHANNEL ALPHA-SUBUNIT); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: INACTIVATION DOMAIN FRAGMENT; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 ORGAN: BRAIN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL26; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX KEYWDS SODIUM CHANNEL, MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR C.A.ROHL,F.A.BOECKMAN,C.BAKER,T.SCHEUER,W.A.CATTERALL,R.E.KLEVIT REVDAT 4 27-DEC-23 1BYY 1 REMARK REVDAT 3 16-FEB-22 1BYY 1 REMARK REVDAT 2 24-FEB-09 1BYY 1 VERSN REVDAT 1 29-OCT-99 1BYY 0 JRNL AUTH C.A.ROHL,F.A.BOECKMAN,C.BAKER,T.SCHEUER,W.A.CATTERALL, JRNL AUTH 2 R.E.KLEVIT JRNL TITL SOLUTION STRUCTURE OF THE SODIUM CHANNEL INACTIVATION GATE. JRNL REF BIOCHEMISTRY V. 38 855 1999 JRNL REFN ISSN 0006-2960 JRNL PMID 9893979 JRNL DOI 10.1021/BI9823380 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1BYY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-AUG-99. REMARK 100 THE DEPOSITION ID IS D_1000007044. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 299 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : H2O/D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N-EDITED NOESY; 13C-EDITED REMARK 210 NOESY; HNHB; HMQC-J REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : DMX500; DMX750 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR 3.1 REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 25 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : NO VIOLATIONS >0.3 DEGREES OR 3 REMARK 210 ANGSTROMS; LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: STRUCTURE DETERMINATION USING TRIPLE-RESONANCE NMR ON 13C, REMARK 210 15N-LABELED PROTEIN REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 ASP A 1474 REMARK 465 ASN A 1475 REMARK 465 PHE A 1476 REMARK 465 ASN A 1477 REMARK 465 GLN A 1478 REMARK 465 GLN A 1479 REMARK 465 LYS A 1480 REMARK 465 LYS A 1481 REMARK 465 LYS A 1482 REMARK 465 PHE A 1483 REMARK 465 GLY A 1484 REMARK 465 GLY A 1485 REMARK 465 LYS A 1507 REMARK 465 LYS A 1508 REMARK 465 PRO A 1509 REMARK 465 GLN A 1510 REMARK 465 LYS A 1511 REMARK 465 PRO A 1512 REMARK 465 ILE A 1513 REMARK 465 PRO A 1514 REMARK 465 ARG A 1515 REMARK 465 PRO A 1516 REMARK 465 ALA A 1517 REMARK 465 ASN A 1518 REMARK 465 LYS A 1519 REMARK 465 PHE A 1520 REMARK 465 GLN A 1521 REMARK 465 GLY A 1522 REMARK 465 MET A 1523 REMARK 465 VAL A 1524 REMARK 465 PHE A 1525 REMARK 465 ASP A 1526 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A1487 -168.12 -71.17 REMARK 500 1 ILE A1488 94.82 -65.66 REMARK 500 1 PHE A1489 -178.79 -53.48 REMARK 500 1 MET A1490 -164.79 -70.94 REMARK 500 1 LYS A1503 80.71 62.61 REMARK 500 1 LEU A1504 42.15 28.69 REMARK 500 2 ILE A1488 47.09 -93.82 REMARK 500 2 LYS A1503 75.74 58.27 REMARK 500 2 LEU A1504 34.85 35.53 REMARK 500 3 ILE A1488 90.94 -67.20 REMARK 500 3 PHE A1489 54.21 -175.18 REMARK 500 3 THR A1491 -165.51 -63.32 REMARK 500 3 LYS A1503 44.04 -95.79 REMARK 500 3 LEU A1504 32.98 -166.44 REMARK 500 4 PHE A1489 -175.55 174.66 REMARK 500 4 LYS A1503 37.19 -97.04 REMARK 500 5 ILE A1488 103.91 57.69 REMARK 500 5 PHE A1489 -173.32 -57.46 REMARK 500 5 LEU A1504 -35.75 91.66 REMARK 500 6 THR A1491 -165.92 -59.37 REMARK 500 6 LYS A1503 38.47 -95.73 REMARK 500 6 LEU A1504 34.60 -173.44 REMARK 500 7 ASP A1487 -163.66 -61.08 REMARK 500 7 PHE A1489 139.14 179.92 REMARK 500 7 LEU A1504 42.17 28.67 REMARK 500 8 ASP A1487 35.68 -98.86 REMARK 500 8 PHE A1489 -176.06 46.20 REMARK 500 8 LYS A1503 29.65 41.99 REMARK 500 8 LEU A1504 14.95 -153.26 REMARK 500 9 PHE A1489 -176.19 -179.82 REMARK 500 9 THR A1491 -167.83 -105.42 REMARK 500 9 LYS A1503 43.57 -92.71 REMARK 500 9 LEU A1504 35.93 -177.12 REMARK 500 10 ASP A1487 -166.11 -61.00 REMARK 500 10 PHE A1489 -176.00 44.72 REMARK 500 10 MET A1490 -156.53 -73.10 REMARK 500 10 LEU A1504 -35.89 -179.24 REMARK 500 REMARK 500 REMARK: NULL DBREF 1BYY A 1474 1526 UNP P04775 SCN2A_RAT 1474 1526 SEQRES 1 A 53 ASP ASN PHE ASN GLN GLN LYS LYS LYS PHE GLY GLY GLN SEQRES 2 A 53 ASP ILE PHE MET THR GLU GLU GLN LYS LYS TYR TYR ASN SEQRES 3 A 53 ALA MET LYS LYS LEU GLY SER LYS LYS PRO GLN LYS PRO SEQRES 4 A 53 ILE PRO ARG PRO ALA ASN LYS PHE GLN GLY MET VAL PHE SEQRES 5 A 53 ASP HELIX 1 1 GLU A 1492 LYS A 1502 1 11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1