HEADER SUGAR BINDING PROTEIN 05-NOV-98 1BZW TITLE PEANUT LECTIN COMPLEXED WITH C-LACTOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (PEANUT LECTIN); COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PEANUT AGGLUTININ-C-LACTOSE COMPLEX SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARACHIS HYPOGAEA; SOURCE 3 ORGANISM_COMMON: PEANUT; SOURCE 4 ORGANISM_TAXID: 3818 KEYWDS LECTIN, LEGUME LECTIN, WATER BRIDGES, CARBOHYDRATE SPECIFICITY, C- KEYWDS 2 LACTOSE, PROTEIN CRYSTALLOGRAPHY, AGGLUTININ, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.RAVISHANKAR,A.SUROLIA,M.VIJAYAN,S.LIM,Y.KISHI REVDAT 8 03-APR-24 1BZW 1 REMARK REVDAT 7 07-FEB-24 1BZW 1 HETSYN REVDAT 6 29-JUL-20 1BZW 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE ATOM REVDAT 5 04-OCT-17 1BZW 1 REMARK REVDAT 4 01-SEP-09 1BZW 1 HET REVDAT 3 24-FEB-09 1BZW 1 VERSN REVDAT 2 29-DEC-99 1BZW 4 HEADER COMPND REMARK JRNL REVDAT 2 2 4 ATOM SOURCE SEQRES REVDAT 1 11-NOV-98 1BZW 0 JRNL AUTH R.RAVISHANKAR,A.SUROLIA,M.VIJAYAN,S.LIM,Y.KISHI JRNL TITL PREFERRED CONFORMATION OF C-LACTOSE AT THE FREE AND PEANUT JRNL TITL 2 LECTIN BOUND STATES JRNL REF J.AM.CHEM.SOC. V. 120 11297 1998 JRNL REFN ISSN 0002-7863 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.RAVISHANKAR,M.RAVINDRAN,K.SUGUNA,A.SUROLIA,M.VIJAYAN REMARK 1 TITL THE SPECIFICITY OF PEANUT AGGLUTININ FOR REMARK 1 TITL 2 THOMSEN-FRIEDENREICH ANTIGEN IS MEDIATED BY WATER-BRIDGES REMARK 1 REF CURR.SCI. V. 72 855 1997 REMARK 1 REFN ISSN 0011-3891 REMARK 1 REFERENCE 2 REMARK 1 AUTH R.BANERJEE,K.DAS,R.RAVISHANKAR,K.SUGUNA,A.SUROLIA,M.VIJAYAN REMARK 1 TITL CONFORMATION, PROTEIN-CARBOHYDRATE INTERACTIONS AND A NOVEL REMARK 1 TITL 2 SUBUNIT ASSOCIATION IN THE REFINED STRUCTURE OF PEANUT REMARK 1 TITL 3 LECTIN-LACTOSE COMPLEX REMARK 1 REF J.MOL.BIOL. V. 259 281 1996 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 3 REMARK 1 AUTH A.WEI,K.M.BOY,Y.KISHI REMARK 1 TITL BIOLOGICAL EVALUATION OF RATIONALLY MODIFIED ANALOG OF THE REMARK 1 TITL 2 H-TYPE II BLOOD GROUP TRISACCHARIDE. A CORRELATION BETWEEN REMARK 1 TITL 3 SOLUTION CONFORMATION AND BINDING AFFINITY REMARK 1 REF J.AM.CHEM.SOC. V. 117 9432 1995 REMARK 1 REFN ISSN 0002-7863 REMARK 1 REFERENCE 4 REMARK 1 AUTH A.WEI,A.HAUDRECHY,C.AUDIN,H.-S.JUN,N.HAUDRECHY-BRETE,Y.KISHI REMARK 1 TITL PREFERRED CONFORMATION OF C-GLYCOSIDES. 14. SYNTHES AND REMARK 1 TITL 2 CONFORMATIONAL ANALYSIS OF CARBON ANALOGS OF TH BLOOD GROUP REMARK 1 TITL 3 DETERMINANT H-TYPE II REMARK 1 REF J.ORG.CHEM. V. 60 2160 1995 REMARK 1 REFN ISSN 0022-3263 REMARK 1 REFERENCE 5 REMARK 1 AUTH R.BANERJEE,S.C.MANDE,V.GANESH,K.DAS,V.DHANARAJ,S.K.MAHANTA, REMARK 1 AUTH 2 K.SUGUNA,A.SUROLIA,M.VIJAYAN REMARK 1 TITL CRYSTAL STRUCTURE OF PEANUT LECTIN, A PROTEIN WITH AN REMARK 1 TITL 2 UNUSUAL QUATERNARY STRUCTURE REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 91 227 1994 REMARK 1 REFN ISSN 0027-8424 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 86.6 REMARK 3 NUMBER OF REFLECTIONS : 29962 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1178 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 69.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3797 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE : 0.2640 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 133 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.023 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6976 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM SIGMAA (A) : 0.28 REMARK 3 LOW RESOLUTION CUTOFF (A) : 10.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 27.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.160 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : GROUP REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : RESTRAIN REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : WAT.PAR REMARK 3 PARAMETER FILE 3 : PARAM1.CHO REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : WAT.TOP REMARK 3 TOPOLOGY FILE 3 : TOPH1.CHO REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1BZW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE DEPOSITION ID IS D_1000008348. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33099 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 19.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 200 DATA REDUNDANCY : 3.750 REMARK 200 R MERGE (I) : 0.12900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.46100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.330 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: X-PLOR 3.1 REMARK 200 STARTING MODEL: PDB2PEL WITHOUT SUGAR AND WATER REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HANGING DROP OF 5 MG/ML PROTEIN IN REMARK 280 0.05 M SODIUM PHOSPHATE BUFFER,PH 7.0, CONTAINING 0.2M SODIUM REMARK 280 CHLORIDE, 0.02 % SODIUM AZIDE, 10MM C-LACTOSE AND 12% (W/V) PEG REMARK 280 8000 IN THE SAME BUFFER, VAPOR DIFFUSION - HANGING DROP, VAPOR REMARK 280 DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 64.56050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.37400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 64.56050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.37400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 78 -19.29 68.05 REMARK 500 LEU A 106 19.58 55.13 REMARK 500 PHE A 122 78.43 -119.01 REMARK 500 SER A 144 147.08 -177.88 REMARK 500 SER A 211 -148.24 -128.43 REMARK 500 THR A 231 72.65 -100.95 REMARK 500 ASP B 78 -19.51 68.33 REMARK 500 LEU B 106 19.85 53.99 REMARK 500 PHE B 122 79.35 -117.63 REMARK 500 SER B 144 147.20 -176.62 REMARK 500 SER B 211 -147.55 -127.41 REMARK 500 THR B 231 72.36 -100.43 REMARK 500 ASP C 78 -19.41 68.98 REMARK 500 LEU C 106 19.30 55.23 REMARK 500 PHE C 122 78.72 -118.03 REMARK 500 SER C 144 148.35 -176.91 REMARK 500 SER C 211 -147.54 -126.60 REMARK 500 THR C 231 72.58 -100.80 REMARK 500 ASP D 78 -18.68 68.75 REMARK 500 PHE D 122 78.54 -117.01 REMARK 500 SER D 144 147.56 -178.30 REMARK 500 SER D 211 -147.12 -126.69 REMARK 500 THR D 231 72.52 -101.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 409 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 121 OE2 REMARK 620 2 ASP A 123 OD2 83.6 REMARK 620 3 ASP A 132 OD1 165.7 98.1 REMARK 620 4 HIS A 137 NE2 97.8 99.8 95.9 REMARK 620 5 HOH A 487 O 77.2 85.0 88.8 172.8 REMARK 620 6 HOH A 488 O 96.9 169.8 79.0 90.3 85.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 408 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 123 OD2 REMARK 620 2 ASP A 123 OD1 52.3 REMARK 620 3 TYR A 125 O 110.8 76.9 REMARK 620 4 ASN A 127 OD1 157.5 148.5 88.0 REMARK 620 5 ASP A 132 OD2 78.4 111.9 82.0 92.7 REMARK 620 6 HOH A 485 O 73.3 116.0 163.0 85.2 82.8 REMARK 620 7 HOH A 486 O 105.6 66.0 88.6 86.5 170.6 106.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 411 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 121 OE2 REMARK 620 2 ASP B 123 OD2 93.0 REMARK 620 3 ASP B 132 OD1 159.8 101.6 REMARK 620 4 HIS B 137 NE2 97.6 103.5 92.4 REMARK 620 5 HOH B 511 O 83.9 91.7 81.9 164.6 REMARK 620 6 HOH B 512 O 84.5 177.5 80.9 76.5 88.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 410 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 123 OD1 REMARK 620 2 ASP B 123 OD2 54.2 REMARK 620 3 TYR B 125 O 77.1 113.0 REMARK 620 4 ASN B 127 OD1 146.0 156.6 88.1 REMARK 620 5 ASP B 132 OD2 116.5 81.4 83.5 91.4 REMARK 620 6 HOH B 509 O 117.7 80.1 164.9 77.8 91.5 REMARK 620 7 HOH B 510 O 75.9 110.8 95.6 75.4 166.8 86.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 413 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 121 OE2 REMARK 620 2 ASP C 123 OD2 88.9 REMARK 620 3 ASP C 132 OD1 161.3 98.4 REMARK 620 4 HIS C 137 NE2 100.2 102.5 95.0 REMARK 620 5 HOH C 488 O 81.7 86.5 81.6 170.8 REMARK 620 6 HOH C 489 O 96.3 174.7 76.3 77.5 93.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 412 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 123 OD1 REMARK 620 2 ASP C 123 OD2 50.0 REMARK 620 3 TYR C 125 O 70.9 103.1 REMARK 620 4 ASN C 127 OD1 151.0 158.8 92.0 REMARK 620 5 ASP C 132 OD2 105.1 74.7 79.3 94.0 REMARK 620 6 HOH C 486 O 110.3 68.8 163.6 92.6 84.7 REMARK 620 7 HOH C 487 O 71.0 104.0 96.6 88.6 175.2 99.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D 415 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 121 OE2 REMARK 620 2 ASP D 123 OD2 95.6 REMARK 620 3 ASP D 132 OD1 172.2 90.3 REMARK 620 4 HIS D 137 NE2 99.5 93.4 85.2 REMARK 620 5 HOH D 488 O 97.8 96.3 76.5 159.2 REMARK 620 6 HOH D 489 O 98.7 165.6 75.6 82.5 83.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 414 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 123 OD2 REMARK 620 2 ASP D 123 OD1 54.6 REMARK 620 3 TYR D 125 O 109.7 74.0 REMARK 620 4 ASN D 127 OD1 162.0 142.0 85.7 REMARK 620 5 ASP D 132 OD2 82.2 116.0 81.2 91.3 REMARK 620 6 HOH D 486 O 86.0 116.4 164.2 79.1 102.9 REMARK 620 7 HOH D 487 O 110.1 71.5 91.9 77.7 167.5 81.1 REMARK 620 N 1 2 3 4 5 6 DBREF 1BZW A 1 232 UNP P02872 LECG_ARAHY 24 255 DBREF 1BZW B 1 232 UNP P02872 LECG_ARAHY 24 255 DBREF 1BZW C 1 232 UNP P02872 LECG_ARAHY 24 255 DBREF 1BZW D 1 232 UNP P02872 LECG_ARAHY 24 255 SEQRES 1 A 232 ALA GLU THR VAL SER PHE ASN PHE ASN SER PHE SER GLU SEQRES 2 A 232 GLY ASN PRO ALA ILE ASN PHE GLN GLY ASP VAL THR VAL SEQRES 3 A 232 LEU SER ASN GLY ASN ILE GLN LEU THR ASN LEU ASN LYS SEQRES 4 A 232 VAL ASN SER VAL GLY ARG VAL LEU TYR ALA MET PRO VAL SEQRES 5 A 232 ARG ILE TRP SER SER ALA THR GLY ASN VAL ALA SER PHE SEQRES 6 A 232 LEU THR SER PHE SER PHE GLU MET LYS ASP ILE LYS ASP SEQRES 7 A 232 TYR ASP PRO ALA ASP GLY ILE ILE PHE PHE ILE ALA PRO SEQRES 8 A 232 GLU ASP THR GLN ILE PRO ALA GLY SER ILE GLY GLY GLY SEQRES 9 A 232 THR LEU GLY VAL SER ASP THR LYS GLY ALA GLY HIS PHE SEQRES 10 A 232 VAL GLY VAL GLU PHE ASP THR TYR SER ASN SER GLU TYR SEQRES 11 A 232 ASN ASP PRO PRO THR ASP HIS VAL GLY ILE ASP VAL ASN SEQRES 12 A 232 SER VAL ASP SER VAL LYS THR VAL PRO TRP ASN SER VAL SEQRES 13 A 232 SER GLY ALA VAL VAL LYS VAL THR VAL ILE TYR ASP SER SEQRES 14 A 232 SER THR LYS THR LEU SER VAL ALA VAL THR ASN ASP ASN SEQRES 15 A 232 GLY ASP ILE THR THR ILE ALA GLN VAL VAL ASP LEU LYS SEQRES 16 A 232 ALA LYS LEU PRO GLU ARG VAL LYS PHE GLY PHE SER ALA SEQRES 17 A 232 SER GLY SER LEU GLY GLY ARG GLN ILE HIS LEU ILE ARG SEQRES 18 A 232 SER TRP SER PHE THR SER THR LEU ILE THR THR SEQRES 1 B 232 ALA GLU THR VAL SER PHE ASN PHE ASN SER PHE SER GLU SEQRES 2 B 232 GLY ASN PRO ALA ILE ASN PHE GLN GLY ASP VAL THR VAL SEQRES 3 B 232 LEU SER ASN GLY ASN ILE GLN LEU THR ASN LEU ASN LYS SEQRES 4 B 232 VAL ASN SER VAL GLY ARG VAL LEU TYR ALA MET PRO VAL SEQRES 5 B 232 ARG ILE TRP SER SER ALA THR GLY ASN VAL ALA SER PHE SEQRES 6 B 232 LEU THR SER PHE SER PHE GLU MET LYS ASP ILE LYS ASP SEQRES 7 B 232 TYR ASP PRO ALA ASP GLY ILE ILE PHE PHE ILE ALA PRO SEQRES 8 B 232 GLU ASP THR GLN ILE PRO ALA GLY SER ILE GLY GLY GLY SEQRES 9 B 232 THR LEU GLY VAL SER ASP THR LYS GLY ALA GLY HIS PHE SEQRES 10 B 232 VAL GLY VAL GLU PHE ASP THR TYR SER ASN SER GLU TYR SEQRES 11 B 232 ASN ASP PRO PRO THR ASP HIS VAL GLY ILE ASP VAL ASN SEQRES 12 B 232 SER VAL ASP SER VAL LYS THR VAL PRO TRP ASN SER VAL SEQRES 13 B 232 SER GLY ALA VAL VAL LYS VAL THR VAL ILE TYR ASP SER SEQRES 14 B 232 SER THR LYS THR LEU SER VAL ALA VAL THR ASN ASP ASN SEQRES 15 B 232 GLY ASP ILE THR THR ILE ALA GLN VAL VAL ASP LEU LYS SEQRES 16 B 232 ALA LYS LEU PRO GLU ARG VAL LYS PHE GLY PHE SER ALA SEQRES 17 B 232 SER GLY SER LEU GLY GLY ARG GLN ILE HIS LEU ILE ARG SEQRES 18 B 232 SER TRP SER PHE THR SER THR LEU ILE THR THR SEQRES 1 C 232 ALA GLU THR VAL SER PHE ASN PHE ASN SER PHE SER GLU SEQRES 2 C 232 GLY ASN PRO ALA ILE ASN PHE GLN GLY ASP VAL THR VAL SEQRES 3 C 232 LEU SER ASN GLY ASN ILE GLN LEU THR ASN LEU ASN LYS SEQRES 4 C 232 VAL ASN SER VAL GLY ARG VAL LEU TYR ALA MET PRO VAL SEQRES 5 C 232 ARG ILE TRP SER SER ALA THR GLY ASN VAL ALA SER PHE SEQRES 6 C 232 LEU THR SER PHE SER PHE GLU MET LYS ASP ILE LYS ASP SEQRES 7 C 232 TYR ASP PRO ALA ASP GLY ILE ILE PHE PHE ILE ALA PRO SEQRES 8 C 232 GLU ASP THR GLN ILE PRO ALA GLY SER ILE GLY GLY GLY SEQRES 9 C 232 THR LEU GLY VAL SER ASP THR LYS GLY ALA GLY HIS PHE SEQRES 10 C 232 VAL GLY VAL GLU PHE ASP THR TYR SER ASN SER GLU TYR SEQRES 11 C 232 ASN ASP PRO PRO THR ASP HIS VAL GLY ILE ASP VAL ASN SEQRES 12 C 232 SER VAL ASP SER VAL LYS THR VAL PRO TRP ASN SER VAL SEQRES 13 C 232 SER GLY ALA VAL VAL LYS VAL THR VAL ILE TYR ASP SER SEQRES 14 C 232 SER THR LYS THR LEU SER VAL ALA VAL THR ASN ASP ASN SEQRES 15 C 232 GLY ASP ILE THR THR ILE ALA GLN VAL VAL ASP LEU LYS SEQRES 16 C 232 ALA LYS LEU PRO GLU ARG VAL LYS PHE GLY PHE SER ALA SEQRES 17 C 232 SER GLY SER LEU GLY GLY ARG GLN ILE HIS LEU ILE ARG SEQRES 18 C 232 SER TRP SER PHE THR SER THR LEU ILE THR THR SEQRES 1 D 232 ALA GLU THR VAL SER PHE ASN PHE ASN SER PHE SER GLU SEQRES 2 D 232 GLY ASN PRO ALA ILE ASN PHE GLN GLY ASP VAL THR VAL SEQRES 3 D 232 LEU SER ASN GLY ASN ILE GLN LEU THR ASN LEU ASN LYS SEQRES 4 D 232 VAL ASN SER VAL GLY ARG VAL LEU TYR ALA MET PRO VAL SEQRES 5 D 232 ARG ILE TRP SER SER ALA THR GLY ASN VAL ALA SER PHE SEQRES 6 D 232 LEU THR SER PHE SER PHE GLU MET LYS ASP ILE LYS ASP SEQRES 7 D 232 TYR ASP PRO ALA ASP GLY ILE ILE PHE PHE ILE ALA PRO SEQRES 8 D 232 GLU ASP THR GLN ILE PRO ALA GLY SER ILE GLY GLY GLY SEQRES 9 D 232 THR LEU GLY VAL SER ASP THR LYS GLY ALA GLY HIS PHE SEQRES 10 D 232 VAL GLY VAL GLU PHE ASP THR TYR SER ASN SER GLU TYR SEQRES 11 D 232 ASN ASP PRO PRO THR ASP HIS VAL GLY ILE ASP VAL ASN SEQRES 12 D 232 SER VAL ASP SER VAL LYS THR VAL PRO TRP ASN SER VAL SEQRES 13 D 232 SER GLY ALA VAL VAL LYS VAL THR VAL ILE TYR ASP SER SEQRES 14 D 232 SER THR LYS THR LEU SER VAL ALA VAL THR ASN ASP ASN SEQRES 15 D 232 GLY ASP ILE THR THR ILE ALA GLN VAL VAL ASP LEU LYS SEQRES 16 D 232 ALA LYS LEU PRO GLU ARG VAL LYS PHE GLY PHE SER ALA SEQRES 17 D 232 SER GLY SER LEU GLY GLY ARG GLN ILE HIS LEU ILE ARG SEQRES 18 D 232 SER TRP SER PHE THR SER THR LEU ILE THR THR HET GLC E 1 12 HET GAL E 2 11 HET GLC F 1 12 HET GAL F 2 11 HET BGC G 1 12 HET GAL G 2 11 HET GLC H 1 12 HET GAL H 2 11 HET CA A 408 1 HET MN A 409 1 HET CA B 410 1 HET MN B 411 1 HET CA C 412 1 HET MN C 413 1 HET CA D 414 1 HET MN D 415 1 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM MN MANGANESE (II) ION HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 5 GLC 3(C6 H12 O6) FORMUL 5 GAL 4(C6 H12 O6) FORMUL 7 BGC C6 H12 O6 FORMUL 9 CA 4(CA 2+) FORMUL 10 MN 4(MN 2+) FORMUL 17 HOH *330(H2 O) HELIX 1 1 GLY A 103 THR A 105 5 3 HELIX 2 2 SER A 128 TYR A 130 5 3 HELIX 3 3 LEU A 194 LYS A 197 1 4 HELIX 4 4 GLY B 103 THR B 105 5 3 HELIX 5 5 SER B 128 TYR B 130 5 3 HELIX 6 6 LEU B 194 LYS B 197 1 4 HELIX 7 7 GLY C 103 THR C 105 5 3 HELIX 8 8 SER C 128 TYR C 130 5 3 HELIX 9 9 LEU C 194 LYS C 197 1 4 HELIX 10 10 GLY D 103 THR D 105 5 3 HELIX 11 11 SER D 128 TYR D 130 5 3 HELIX 12 12 LEU D 194 LYS D 197 1 4 SHEET 1 A 6 GLU A 2 PHE A 8 0 SHEET 2 A 6 ILE A 217 LEU A 229 -1 N LEU A 229 O GLU A 2 SHEET 3 A 6 SER A 64 LYS A 74 -1 N LYS A 74 O ILE A 217 SHEET 4 A 6 ALA A 159 ASP A 168 -1 N TYR A 167 O PHE A 65 SHEET 5 A 6 THR A 173 THR A 179 -1 N THR A 179 O LYS A 162 SHEET 6 A 6 ILE A 185 VAL A 191 -1 N GLN A 190 O LEU A 174 SHEET 1 B 7 ILE A 18 GLY A 22 0 SHEET 2 B 7 VAL A 43 TYR A 48 -1 N LEU A 47 O ASN A 19 SHEET 3 B 7 VAL A 202 SER A 209 -1 N ALA A 208 O GLY A 44 SHEET 4 B 7 GLY A 84 PRO A 91 -1 N ALA A 90 O LYS A 203 SHEET 5 B 7 VAL A 118 ASP A 123 -1 N PHE A 122 O ILE A 85 SHEET 6 B 7 HIS A 137 VAL A 142 -1 N ASP A 141 O GLY A 119 SHEET 7 B 7 LYS A 149 PRO A 152 -1 N VAL A 151 O VAL A 138 SHEET 1 C 6 GLU B 2 PHE B 8 0 SHEET 2 C 6 GLN B 216 LEU B 229 -1 N LEU B 229 O GLU B 2 SHEET 3 C 6 SER B 64 ASP B 75 -1 N LYS B 74 O ILE B 217 SHEET 4 C 6 VAL B 160 ASP B 168 -1 N TYR B 167 O PHE B 65 SHEET 5 C 6 THR B 173 THR B 179 -1 N THR B 179 O LYS B 162 SHEET 6 C 6 ILE B 185 VAL B 191 -1 N GLN B 190 O LEU B 174 SHEET 1 D 7 ILE B 18 GLY B 22 0 SHEET 2 D 7 VAL B 43 TYR B 48 -1 N LEU B 47 O ASN B 19 SHEET 3 D 7 VAL B 202 SER B 209 -1 N ALA B 208 O GLY B 44 SHEET 4 D 7 GLY B 84 PRO B 91 -1 N ALA B 90 O LYS B 203 SHEET 5 D 7 VAL B 118 ASP B 123 -1 N PHE B 122 O ILE B 85 SHEET 6 D 7 HIS B 137 VAL B 142 -1 N ASP B 141 O GLY B 119 SHEET 7 D 7 LYS B 149 PRO B 152 -1 N VAL B 151 O VAL B 138 SHEET 1 E 6 GLU C 2 PHE C 8 0 SHEET 2 E 6 ILE C 217 LEU C 229 -1 N LEU C 229 O GLU C 2 SHEET 3 E 6 SER C 64 LYS C 74 -1 N LYS C 74 O ILE C 217 SHEET 4 E 6 ALA C 159 ASP C 168 -1 N TYR C 167 O PHE C 65 SHEET 5 E 6 THR C 173 THR C 179 -1 N THR C 179 O LYS C 162 SHEET 6 E 6 ILE C 185 VAL C 191 -1 N GLN C 190 O LEU C 174 SHEET 1 F 7 ILE C 18 GLY C 22 0 SHEET 2 F 7 VAL C 43 TYR C 48 -1 N LEU C 47 O ASN C 19 SHEET 3 F 7 VAL C 202 SER C 209 -1 N ALA C 208 O GLY C 44 SHEET 4 F 7 GLY C 84 PRO C 91 -1 N ALA C 90 O LYS C 203 SHEET 5 F 7 VAL C 118 ASP C 123 -1 N PHE C 122 O ILE C 85 SHEET 6 F 7 HIS C 137 VAL C 142 -1 N ASP C 141 O GLY C 119 SHEET 7 F 7 LYS C 149 PRO C 152 -1 N VAL C 151 O VAL C 138 SHEET 1 G 6 GLU D 2 PHE D 8 0 SHEET 2 G 6 GLN D 216 LEU D 229 -1 N LEU D 229 O GLU D 2 SHEET 3 G 6 SER D 64 ASP D 75 -1 N LYS D 74 O ILE D 217 SHEET 4 G 6 ALA D 159 ASP D 168 -1 N TYR D 167 O PHE D 65 SHEET 5 G 6 THR D 173 THR D 179 -1 N THR D 179 O LYS D 162 SHEET 6 G 6 ILE D 185 VAL D 191 -1 N GLN D 190 O LEU D 174 SHEET 1 H 7 ILE D 18 GLY D 22 0 SHEET 2 H 7 VAL D 43 TYR D 48 -1 N LEU D 47 O ASN D 19 SHEET 3 H 7 VAL D 202 SER D 209 -1 N ALA D 208 O GLY D 44 SHEET 4 H 7 GLY D 84 PRO D 91 -1 N ALA D 90 O LYS D 203 SHEET 5 H 7 VAL D 118 ASP D 123 -1 N PHE D 122 O ILE D 85 SHEET 6 H 7 HIS D 137 VAL D 142 -1 N ASP D 141 O GLY D 119 SHEET 7 H 7 LYS D 149 PRO D 152 -1 N VAL D 151 O VAL D 138 LINK O4 GLC E 1 C1 GAL E 2 1555 1555 1.51 LINK O4 GLC F 1 C1 GAL F 2 1555 1555 1.50 LINK O4 BGC G 1 C1 GAL G 2 1555 1555 1.49 LINK O4 GLC H 1 C1 GAL H 2 1555 1555 1.48 LINK OE2 GLU A 121 MN MN A 409 1555 1555 2.28 LINK OD2 ASP A 123 CA CA A 408 1555 1555 2.53 LINK OD1 ASP A 123 CA CA A 408 1555 1555 2.35 LINK OD2 ASP A 123 MN MN A 409 1555 1555 2.14 LINK O TYR A 125 CA CA A 408 1555 1555 2.18 LINK OD1 ASN A 127 CA CA A 408 1555 1555 2.31 LINK OD2 ASP A 132 CA CA A 408 1555 1555 2.20 LINK OD1 ASP A 132 MN MN A 409 1555 1555 2.12 LINK NE2 HIS A 137 MN MN A 409 1555 1555 2.25 LINK CA CA A 408 O HOH A 485 1555 1555 2.08 LINK CA CA A 408 O HOH A 486 1555 1555 2.36 LINK MN MN A 409 O HOH A 487 1555 1555 2.21 LINK MN MN A 409 O HOH A 488 1555 1555 2.11 LINK OE2 GLU B 121 MN MN B 411 1555 1555 2.22 LINK OD1 ASP B 123 CA CA B 410 1555 1555 2.27 LINK OD2 ASP B 123 CA CA B 410 1555 1555 2.44 LINK OD2 ASP B 123 MN MN B 411 1555 1555 1.86 LINK O TYR B 125 CA CA B 410 1555 1555 2.16 LINK OD1 ASN B 127 CA CA B 410 1555 1555 2.41 LINK OD2 ASP B 132 CA CA B 410 1555 1555 2.14 LINK OD1 ASP B 132 MN MN B 411 1555 1555 2.24 LINK NE2 HIS B 137 MN MN B 411 1555 1555 2.33 LINK CA CA B 410 O HOH B 509 1555 1555 2.37 LINK CA CA B 410 O HOH B 510 1555 1555 2.23 LINK MN MN B 411 O HOH B 511 1555 1555 2.30 LINK MN MN B 411 O HOH B 512 1555 1555 2.08 LINK OE2 GLU C 121 MN MN C 413 1555 1555 2.21 LINK OD1 ASP C 123 CA CA C 412 1555 1555 2.47 LINK OD2 ASP C 123 CA CA C 412 1555 1555 2.64 LINK OD2 ASP C 123 MN MN C 413 1555 1555 2.04 LINK O TYR C 125 CA CA C 412 1555 1555 2.25 LINK OD1 ASN C 127 CA CA C 412 1555 1555 2.20 LINK OD2 ASP C 132 CA CA C 412 1555 1555 2.28 LINK OD1 ASP C 132 MN MN C 413 1555 1555 2.23 LINK NE2 HIS C 137 MN MN C 413 1555 1555 2.24 LINK CA CA C 412 O HOH C 486 1555 1555 2.31 LINK CA CA C 412 O HOH C 487 1555 1555 2.04 LINK MN MN C 413 O HOH C 488 1555 1555 2.18 LINK MN MN C 413 O HOH C 489 1555 1555 2.09 LINK OE2 GLU D 121 MN MN D 415 1555 1555 1.97 LINK OD2 ASP D 123 CA CA D 414 1555 1555 2.39 LINK OD1 ASP D 123 CA CA D 414 1555 1555 2.35 LINK OD2 ASP D 123 MN MN D 415 1555 1555 2.10 LINK O TYR D 125 CA CA D 414 1555 1555 2.29 LINK OD1 ASN D 127 CA CA D 414 1555 1555 2.38 LINK OD2 ASP D 132 CA CA D 414 1555 1555 2.15 LINK OD1 ASP D 132 MN MN D 415 1555 1555 2.44 LINK NE2 HIS D 137 MN MN D 415 1555 1555 2.48 LINK CA CA D 414 O HOH D 486 1555 1555 2.25 LINK CA CA D 414 O HOH D 487 1555 1555 2.42 LINK MN MN D 415 O HOH D 488 1555 1555 1.93 LINK MN MN D 415 O HOH D 489 1555 1555 2.00 CISPEP 1 ALA A 82 ASP A 83 0 -0.79 CISPEP 2 ALA B 82 ASP B 83 0 -0.83 CISPEP 3 ALA C 82 ASP C 83 0 -0.40 CISPEP 4 ALA D 82 ASP D 83 0 -0.50 CRYST1 129.121 126.748 76.900 90.00 90.00 90.00 P 21 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007745 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007890 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013004 0.00000 MTRIX1 1 -0.996954 -0.072618 -0.028465 62.38570 1 MTRIX2 1 -0.077814 0.951013 0.299196 -7.77030 1 MTRIX3 1 0.005343 0.300500 -0.953767 65.74720 1 MTRIX1 2 0.488143 0.236120 0.840216 10.37690 1 MTRIX2 2 -0.355893 -0.825179 0.438658 11.66190 1 MTRIX3 2 0.796905 -0.513155 -0.318772 29.92790 1 MTRIX1 3 -0.456008 -0.145980 -0.877922 95.51900 1 MTRIX2 3 -0.143388 -0.961517 0.234359 1.14000 1 MTRIX3 3 -0.878349 0.232753 0.417527 59.20780 1