data_1C11 # _entry.id 1C11 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1C11 pdb_00001c11 10.2210/pdb1c11/pdb RCSB RCSB008177 ? ? WWPDB D_1000008177 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1C11 _pdbx_database_status.recvd_initial_deposition_date 1998-07-15 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gallego, J.' 1 'Chou, S.H.' 2 'Reid, B.R.' 3 # _citation.id primary _citation.title ;Centromeric pyrimidine strands fold into an intercalated motif by forming a double hairpin with a novel T:G:G:T tetrad: solution structure of the d(TCCCGTTTCCA) dimer. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 273 _citation.page_first 840 _citation.page_last 856 _citation.year 1997 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9367776 _citation.pdbx_database_id_DOI 10.1006/jmbi.1997.1361 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gallego, J.' 1 ? primary 'Chou, S.H.' 2 ? primary 'Reid, B.R.' 3 ? # _cell.entry_id 1C11 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C11 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-D(*TP*CP*CP*CP*GP*TP*TP*TP*CP*CP*A)-3') ; _entity.formula_weight 3260.135 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DT)(DC)(DC)(DC)(DG)(DT)(DT)(DT)(DC)(DC)(DA)' _entity_poly.pdbx_seq_one_letter_code_can TCCCGTTTCCA _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DC n 1 3 DC n 1 4 DC n 1 5 DG n 1 6 DT n 1 7 DT n 1 8 DT n 1 9 DC n 1 10 DC n 1 11 DA n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1C11 _struct_ref.pdbx_db_accession 1C11 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1C11 A 1 ? 11 ? 1C11 1 ? 11 ? 1 11 2 1 1C11 B 1 ? 11 ? 1C11 1 ? 11 ? 1 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D H/H NOESY' 1 2 1 'H/H COSY' 1 3 1 'H/P HETCOR' 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 302 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 4.1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.2M _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 HOME-BUILT Home-built 500 ? 2 DMX-750 Bruker 750 ? # _pdbx_nmr_refine.entry_id 1C11 _pdbx_nmr_refine.method 'NOESY BACKC.+DG+MD' _pdbx_nmr_refine.details ;USED NOESY BACK-CALCULATION (BIRDER); DISTANCE GEOMETRY (DGII) AND MOLECULAR DYNAMICS (DISCOVER, AMBER) ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1C11 _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 7 _pdbx_nmr_ensemble.conformer_selection_criteria 'STRUCTURE CONVERGENCE' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement BIRDER ? 'ZHU & REID' 1 'structure solution' Felix ? ? 2 'structure solution' BIRDER ? ? 3 'structure solution' DGII ? ? 4 'structure solution' Discover ? ? 5 'structure solution' Amber ? ? 6 # _exptl.entry_id 1C11 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1C11 _struct.title 'INTERCALATED D(TCCCGTTTCCA) DIMER, NMR, 7 STRUCTURES' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1C11 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'ALPHOID DNA, CENTROMERE, HAIRPIN, I-MOTIF, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 B DT 1 O4 ? ? A DT 1 B DT 1 1_555 ? ? ? ? ? ? TYPE_12_PAIR ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 B DT 1 N3 ? ? A DT 1 B DT 1 1_555 ? ? ? ? ? ? TYPE_12_PAIR ? ? ? hydrog3 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DC 2 O2 ? ? A DC 2 B DC 2 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog4 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DC 2 N4 ? ? A DC 2 B DC 2 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog5 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DC 3 O2 ? ? A DC 3 B DC 3 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog6 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DC 3 N4 ? ? A DC 3 B DC 3 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog7 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DC 4 O2 ? ? A DC 4 B DC 4 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog8 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DC 4 N4 ? ? A DC 4 B DC 4 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog9 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DT 8 O2 ? ? A DC 4 B DT 8 1_555 ? ? ? ? ? ? 'DC-DT MISPAIR' ? ? ? hydrog10 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DG 5 N3 ? ? A DG 5 B DG 5 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog11 hydrog ? ? A DG 5 N3 ? ? ? 1_555 B DG 5 N2 ? ? A DG 5 B DG 5 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog12 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DT 8 O2 ? ? A DG 5 B DT 8 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DT 8 N3 ? ? A DG 5 B DT 8 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog14 hydrog ? ? A DT 8 O2 ? ? ? 1_555 B DC 4 N4 ? ? A DT 8 B DC 4 1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ? ? ? hydrog15 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DG 5 O6 ? ? A DT 8 B DG 5 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog16 hydrog ? ? A DT 8 O2 ? ? ? 1_555 B DG 5 N1 ? ? A DT 8 B DG 5 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog17 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DC 9 O2 ? ? A DC 9 B DC 9 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog18 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DC 9 N4 ? ? A DC 9 B DC 9 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog19 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DC 10 O2 ? ? A DC 10 B DC 10 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog20 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DC 10 N4 ? ? A DC 10 B DC 10 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1C11 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1C11 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT DT A . n A 1 2 DC 2 2 2 DC DC A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DC 9 9 9 DC DC A . n A 1 10 DC 10 10 10 DC DC A . n A 1 11 DA 11 11 11 DA DA A . n B 1 1 DT 1 1 1 DT DT B . n B 1 2 DC 2 2 2 DC DC B . n B 1 3 DC 3 3 3 DC DC B . n B 1 4 DC 4 4 4 DC DC B . n B 1 5 DG 5 5 5 DG DG B . n B 1 6 DT 6 6 6 DT DT B . n B 1 7 DT 7 7 7 DT DT B . n B 1 8 DT 8 8 8 DT DT B . n B 1 9 DC 9 9 9 DC DC B . n B 1 10 DC 10 10 10 DC DC B . n B 1 11 DA 11 11 11 DA DA B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-07-22 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N3 A DC 2 ? ? C4 A DC 2 ? ? 1.379 1.335 0.044 0.007 N 2 1 N3 A DC 3 ? ? C4 A DC 3 ? ? 1.377 1.335 0.042 0.007 N 3 1 N3 A DC 4 ? ? C4 A DC 4 ? ? 1.381 1.335 0.046 0.007 N 4 1 N3 A DC 10 ? ? C4 A DC 10 ? ? 1.379 1.335 0.044 0.007 N 5 1 "C5'" A DA 11 ? ? "C4'" A DA 11 ? ? 1.558 1.512 0.046 0.007 N 6 1 "C5'" B DA 11 ? ? "C4'" B DA 11 ? ? 1.557 1.512 0.045 0.007 N 7 2 N3 A DC 2 ? ? C4 A DC 2 ? ? 1.380 1.335 0.045 0.007 N 8 2 N3 A DC 4 ? ? C4 A DC 4 ? ? 1.379 1.335 0.044 0.007 N 9 2 N3 A DC 10 ? ? C4 A DC 10 ? ? 1.380 1.335 0.045 0.007 N 10 3 N3 A DC 2 ? ? C4 A DC 2 ? ? 1.380 1.335 0.045 0.007 N 11 3 N3 A DC 4 ? ? C4 A DC 4 ? ? 1.381 1.335 0.046 0.007 N 12 3 N3 A DC 10 ? ? C4 A DC 10 ? ? 1.379 1.335 0.044 0.007 N 13 4 N3 A DC 2 ? ? C4 A DC 2 ? ? 1.379 1.335 0.044 0.007 N 14 4 N3 A DC 4 ? ? C4 A DC 4 ? ? 1.381 1.335 0.046 0.007 N 15 4 N3 A DC 10 ? ? C4 A DC 10 ? ? 1.379 1.335 0.044 0.007 N 16 4 "C5'" B DA 11 ? ? "C4'" B DA 11 ? ? 1.558 1.512 0.046 0.007 N 17 5 N3 A DC 2 ? ? C4 A DC 2 ? ? 1.379 1.335 0.044 0.007 N 18 5 N3 A DC 4 ? ? C4 A DC 4 ? ? 1.380 1.335 0.045 0.007 N 19 5 N3 A DC 10 ? ? C4 A DC 10 ? ? 1.379 1.335 0.044 0.007 N 20 5 "C5'" A DA 11 ? ? "C4'" A DA 11 ? ? 1.558 1.512 0.046 0.007 N 21 6 N3 A DC 2 ? ? C4 A DC 2 ? ? 1.378 1.335 0.043 0.007 N 22 6 N3 A DC 4 ? ? C4 A DC 4 ? ? 1.381 1.335 0.046 0.007 N 23 6 N3 A DC 10 ? ? C4 A DC 10 ? ? 1.379 1.335 0.044 0.007 N 24 6 "C5'" B DA 11 ? ? "C4'" B DA 11 ? ? 1.558 1.512 0.046 0.007 N 25 7 N3 A DC 2 ? ? C4 A DC 2 ? ? 1.378 1.335 0.043 0.007 N 26 7 N3 A DC 4 ? ? C4 A DC 4 ? ? 1.381 1.335 0.046 0.007 N 27 7 N3 A DC 10 ? ? C4 A DC 10 ? ? 1.380 1.335 0.045 0.007 N 28 7 "C5'" A DA 11 ? ? "C4'" A DA 11 ? ? 1.557 1.512 0.045 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 111.48 108.30 3.18 0.30 N 2 1 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.35 118.90 4.45 0.60 N 3 1 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.44 118.90 4.54 0.60 N 4 1 N1 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 123.37 118.90 4.47 0.60 N 5 1 "C3'" A DG 5 ? ? "C2'" A DG 5 ? ? "C1'" A DG 5 ? ? 97.56 102.40 -4.84 0.80 N 6 1 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 101.89 108.00 -6.11 0.70 N 7 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.20 108.30 1.90 0.30 N 8 1 N1 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 123.44 118.90 4.54 0.60 N 9 1 N1 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 123.34 118.90 4.44 0.60 N 10 1 "O4'" B DC 2 ? ? "C1'" B DC 2 ? ? N1 B DC 2 ? ? 111.42 108.30 3.12 0.30 N 11 1 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 101.78 108.00 -6.22 0.70 N 12 1 C6 B DT 6 ? ? C5 B DT 6 ? ? C7 B DT 6 ? ? 118.77 122.90 -4.13 0.60 N 13 1 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.13 108.30 1.83 0.30 N 14 2 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 111.34 108.30 3.04 0.30 N 15 2 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.37 118.90 4.47 0.60 N 16 2 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.29 108.30 1.99 0.30 N 17 2 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.36 118.90 4.46 0.60 N 18 2 N1 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 123.42 118.90 4.52 0.60 N 19 2 "C3'" A DG 5 ? ? "C2'" A DG 5 ? ? "C1'" A DG 5 ? ? 97.52 102.40 -4.88 0.80 N 20 2 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 101.55 108.00 -6.45 0.70 N 21 2 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 118.70 122.90 -4.20 0.60 N 22 2 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.20 108.30 1.90 0.30 N 23 2 N1 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 123.42 118.90 4.52 0.60 N 24 2 N1 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 123.35 118.90 4.45 0.60 N 25 2 "O4'" B DC 2 ? ? "C1'" B DC 2 ? ? N1 B DC 2 ? ? 110.72 108.30 2.42 0.30 N 26 2 "O4'" B DC 3 ? ? "C1'" B DC 3 ? ? N1 B DC 3 ? ? 110.44 108.30 2.14 0.30 N 27 2 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 102.10 108.00 -5.90 0.70 N 28 2 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.30 108.30 2.00 0.30 N 29 3 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 111.41 108.30 3.11 0.30 N 30 3 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.26 118.90 4.36 0.60 N 31 3 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.12 108.30 1.82 0.30 N 32 3 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.51 118.90 4.61 0.60 N 33 3 N1 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 123.37 118.90 4.47 0.60 N 34 3 "C3'" A DG 5 ? ? "C2'" A DG 5 ? ? "C1'" A DG 5 ? ? 97.52 102.40 -4.88 0.80 N 35 3 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 101.86 108.00 -6.14 0.70 N 36 3 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.21 108.30 1.91 0.30 N 37 3 N1 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 123.42 118.90 4.52 0.60 N 38 3 N1 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 123.37 118.90 4.47 0.60 N 39 3 "O4'" B DC 2 ? ? "C1'" B DC 2 ? ? N1 B DC 2 ? ? 111.29 108.30 2.99 0.30 N 40 3 "O4'" B DC 3 ? ? "C1'" B DC 3 ? ? N1 B DC 3 ? ? 110.15 108.30 1.85 0.30 N 41 3 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 101.69 108.00 -6.31 0.70 N 42 3 C6 B DT 6 ? ? C5 B DT 6 ? ? C7 B DT 6 ? ? 118.76 122.90 -4.14 0.60 N 43 3 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.20 108.30 1.90 0.30 N 44 4 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 111.41 108.30 3.11 0.30 N 45 4 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.39 118.90 4.49 0.60 N 46 4 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.46 108.30 2.16 0.30 N 47 4 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.45 118.90 4.55 0.60 N 48 4 N1 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 123.40 118.90 4.50 0.60 N 49 4 "C3'" A DG 5 ? ? "C2'" A DG 5 ? ? "C1'" A DG 5 ? ? 97.58 102.40 -4.82 0.80 N 50 4 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 101.84 108.00 -6.16 0.70 N 51 4 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.28 108.30 1.98 0.30 N 52 4 N1 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 123.45 118.90 4.55 0.60 N 53 4 N1 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 123.37 118.90 4.47 0.60 N 54 4 "O4'" B DC 2 ? ? "C1'" B DC 2 ? ? N1 B DC 2 ? ? 111.45 108.30 3.15 0.30 N 55 4 "O4'" B DC 3 ? ? "C1'" B DC 3 ? ? N1 B DC 3 ? ? 110.51 108.30 2.21 0.30 N 56 4 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 101.75 108.00 -6.25 0.70 N 57 4 C6 B DT 6 ? ? C5 B DT 6 ? ? C7 B DT 6 ? ? 118.74 122.90 -4.16 0.60 N 58 4 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.17 108.30 1.87 0.30 N 59 5 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 111.62 108.30 3.32 0.30 N 60 5 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.26 118.90 4.36 0.60 N 61 5 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.53 118.90 4.63 0.60 N 62 5 N1 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 123.38 118.90 4.48 0.60 N 63 5 "C3'" A DG 5 ? ? "C2'" A DG 5 ? ? "C1'" A DG 5 ? ? 97.55 102.40 -4.85 0.80 N 64 5 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 101.82 108.00 -6.18 0.70 N 65 5 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.28 108.30 1.98 0.30 N 66 5 N1 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 123.40 118.90 4.50 0.60 N 67 5 N1 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 123.48 118.90 4.58 0.60 N 68 5 "O4'" B DC 2 ? ? "C1'" B DC 2 ? ? N1 B DC 2 ? ? 111.23 108.30 2.93 0.30 N 69 5 "O4'" B DC 3 ? ? "C1'" B DC 3 ? ? N1 B DC 3 ? ? 110.34 108.30 2.04 0.30 N 70 5 "C3'" B DG 5 ? ? "C2'" B DG 5 ? ? "C1'" B DG 5 ? ? 97.59 102.40 -4.81 0.80 N 71 5 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 101.70 108.00 -6.30 0.70 N 72 5 C6 B DT 6 ? ? C5 B DT 6 ? ? C7 B DT 6 ? ? 118.69 122.90 -4.21 0.60 N 73 5 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.20 108.30 1.90 0.30 N 74 6 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 113.40 108.30 5.10 0.30 N 75 6 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.42 118.90 4.52 0.60 N 76 6 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.68 108.30 2.38 0.30 N 77 6 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.45 118.90 4.55 0.60 N 78 6 N1 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 123.37 118.90 4.47 0.60 N 79 6 "C3'" A DG 5 ? ? "C2'" A DG 5 ? ? "C1'" A DG 5 ? ? 97.54 102.40 -4.86 0.80 N 80 6 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 101.91 108.00 -6.09 0.70 N 81 6 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.23 108.30 1.93 0.30 N 82 6 N1 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 123.36 118.90 4.46 0.60 N 83 6 N1 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 123.46 118.90 4.56 0.60 N 84 6 "O4'" B DC 2 ? ? "C1'" B DC 2 ? ? N1 B DC 2 ? ? 113.28 108.30 4.98 0.30 N 85 6 "O4'" B DC 3 ? ? "C1'" B DC 3 ? ? N1 B DC 3 ? ? 110.63 108.30 2.33 0.30 N 86 6 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 101.79 108.00 -6.21 0.70 N 87 6 C6 B DT 6 ? ? C5 B DT 6 ? ? C7 B DT 6 ? ? 118.68 122.90 -4.22 0.60 N 88 6 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.21 108.30 1.91 0.30 N 89 7 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 111.19 108.30 2.89 0.30 N 90 7 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.28 118.90 4.38 0.60 N 91 7 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.63 108.30 2.33 0.30 N 92 7 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.50 118.90 4.60 0.60 N 93 7 N1 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 123.50 118.90 4.60 0.60 N 94 7 "C3'" A DG 5 ? ? "C2'" A DG 5 ? ? "C1'" A DG 5 ? ? 97.55 102.40 -4.85 0.80 N 95 7 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 101.90 108.00 -6.10 0.70 N 96 7 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.23 108.30 1.93 0.30 N 97 7 N1 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 123.38 118.90 4.48 0.60 N 98 7 N1 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 123.35 118.90 4.45 0.60 N 99 7 "O4'" B DC 2 ? ? "C1'" B DC 2 ? ? N1 B DC 2 ? ? 111.42 108.30 3.12 0.30 N 100 7 "O4'" B DC 3 ? ? "C1'" B DC 3 ? ? N1 B DC 3 ? ? 110.24 108.30 1.94 0.30 N 101 7 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 101.63 108.00 -6.37 0.70 N 102 7 C6 B DT 6 ? ? C5 B DT 6 ? ? C7 B DT 6 ? ? 118.81 122.90 -4.09 0.60 N 103 7 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.24 108.30 1.94 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC A 10 ? ? 0.086 'SIDE CHAIN' 2 1 DA A 11 ? ? 0.067 'SIDE CHAIN' 3 1 DC B 10 ? ? 0.097 'SIDE CHAIN' 4 1 DA B 11 ? ? 0.067 'SIDE CHAIN' 5 2 DC A 10 ? ? 0.080 'SIDE CHAIN' 6 2 DA A 11 ? ? 0.066 'SIDE CHAIN' 7 2 DC B 10 ? ? 0.088 'SIDE CHAIN' 8 2 DA B 11 ? ? 0.074 'SIDE CHAIN' 9 3 DC A 10 ? ? 0.080 'SIDE CHAIN' 10 3 DA A 11 ? ? 0.062 'SIDE CHAIN' 11 3 DC B 10 ? ? 0.086 'SIDE CHAIN' 12 3 DA B 11 ? ? 0.063 'SIDE CHAIN' 13 4 DC A 10 ? ? 0.078 'SIDE CHAIN' 14 4 DA A 11 ? ? 0.067 'SIDE CHAIN' 15 4 DC B 10 ? ? 0.096 'SIDE CHAIN' 16 4 DA B 11 ? ? 0.070 'SIDE CHAIN' 17 5 DC A 10 ? ? 0.086 'SIDE CHAIN' 18 5 DA A 11 ? ? 0.063 'SIDE CHAIN' 19 5 DC B 10 ? ? 0.088 'SIDE CHAIN' 20 5 DA B 11 ? ? 0.063 'SIDE CHAIN' 21 6 DC A 10 ? ? 0.083 'SIDE CHAIN' 22 6 DA A 11 ? ? 0.059 'SIDE CHAIN' 23 6 DC B 10 ? ? 0.107 'SIDE CHAIN' 24 6 DA B 11 ? ? 0.063 'SIDE CHAIN' 25 7 DC A 10 ? ? 0.086 'SIDE CHAIN' 26 7 DA A 11 ? ? 0.064 'SIDE CHAIN' 27 7 DC B 10 ? ? 0.082 'SIDE CHAIN' 28 7 DA B 11 ? ? 0.062 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1C11 'double helix' 1C11 'parallel strands' 1C11 'mismatched base pair' 1C11 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 B DT 1 1_555 1.676 -2.821 -0.029 -44.259 -0.077 179.241 1 A_DT1:DT1_B A 1 ? B 1 ? 12 1 1 A DC 2 1_555 B DC 2 1_555 1.869 1.558 -0.102 -2.069 -12.873 179.556 2 A_DC2:DC2_B A 2 ? B 2 ? 15 2 1 A DC 10 1_555 B DC 10 1_555 1.875 1.590 -0.063 -7.747 -7.090 179.707 3 A_DC10:DC10_B A 10 ? B 10 ? 15 2 1 A DC 3 1_555 B DC 3 1_555 1.909 1.682 -0.073 0.160 -9.838 179.370 4 A_DC3:DC3_B A 3 ? B 3 ? 15 2 1 A DC 9 1_555 B DC 9 1_555 -1.772 -0.889 -0.016 12.005 0.833 -179.972 5 A_DC9:DC9_B A 9 ? B 9 ? 15 2 1 A DC 4 1_555 B DC 4 1_555 1.850 1.506 -0.067 -1.131 -11.758 179.558 6 A_DC4:DC4_B A 4 ? B 4 ? 15 2 1 A DG 5 1_555 B DT 8 1_555 -2.407 -0.562 0.837 11.711 18.331 3.429 7 A_DG5:DT8_B A 5 ? B 8 ? 28 ? 1 A DT 8 1_555 B DG 5 1_555 -2.333 -0.534 -0.784 11.262 19.056 -3.523 8 A_DT8:DG5_B A 8 ? B 5 ? 28 ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 B DT 1 1_555 A DC 2 1_555 B DC 2 1_555 0.011 0.016 6.187 0.012 0.420 46.393 -0.046 -0.013 6.187 0.533 -0.016 46.394 1 AA_DT1DC2:DC2DT1_BB A 1 ? B 1 ? A 2 ? B 2 ? 1 A DC 2 1_555 B DC 2 1_555 A DC 10 1_555 B DC 10 1_555 -1.755 2.099 0.013 135.025 117.145 150.001 1.048 0.880 0.025 58.586 -67.528 179.679 2 AA_DC2DC10:DC10DC2_BB A 2 ? B 2 ? A 10 ? B 10 ? 1 A DC 10 1_555 B DC 10 1_555 A DC 3 1_555 B DC 3 1_555 -1.937 3.015 0.039 -152.379 -93.350 -167.480 -1.506 -0.970 0.030 46.677 -76.193 -179.858 3 AA_DC10DC3:DC3DC10_BB A 10 ? B 10 ? A 3 ? B 3 ? 1 A DC 3 1_555 B DC 3 1_555 A DC 9 1_555 B DC 9 1_555 -2.180 -1.904 -0.039 -117.733 134.647 -67.493 0.965 -1.079 -0.023 -67.514 -59.033 -179.052 4 AA_DC3DC9:DC9DC3_BB A 3 ? B 3 ? A 9 ? B 9 ? 1 A DC 9 1_555 B DC 9 1_555 A DC 4 1_555 B DC 4 1_555 -2.971 -2.011 0.102 102.612 -146.503 112.448 -0.986 1.499 0.053 -73.330 -51.361 179.368 5 AA_DC9DC4:DC4DC9_BB A 9 ? B 9 ? A 4 ? B 4 ? 1 A DC 4 1_555 B DC 4 1_555 A DG 5 1_555 B DT 8 1_555 2.552 4.793 2.134 4.589 8.706 149.308 2.461 -1.310 2.261 4.513 -2.379 149.424 6 AA_DC4DG5:DT8DC4_BB A 4 ? B 4 ? A 5 ? B 8 ? #