HEADER ION TRANSPORT 29-JUL-99 1C8S
TITLE BACTERIORHODOPSIN D96N LATE M STATE INTERMEDIATE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: BACTERIORHODOPSIN ("M" STATE INTERMEDIATE);
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES;
COMPND 5 MUTATION: YES;
COMPND 6 OTHER_DETAILS: SCHIFF BASE LINKAGE BETWEEN LYS 216 (NZ) AND RET 301
COMPND 7 (C15) DIETHER LIPID BILAYER
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HALOBACTERIUM SALINARUM;
SOURCE 3 ORGANISM_TAXID: 2242;
SOURCE 4 EXPRESSION_SYSTEM: HALOBACTERIUM SALINARUM;
SOURCE 5 EXPRESSION_SYSTEM_TAXID: 2242
KEYWDS ION PUMP, MEMBRANE PROTEIN, RETINAL PROTEIN, LIPIDS, PHOTORECEPTOR,
KEYWDS 2 HALOARCHAEA, D96N M INTERMEDIATE, ION TRANSPORT, MEROHEDRAL TWINNING
EXPDTA X-RAY DIFFRACTION
AUTHOR H.LUECKE
REVDAT 7 16-OCT-24 1C8S 1 REMARK
REVDAT 6 09-AUG-23 1C8S 1 REMARK
REVDAT 5 03-NOV-21 1C8S 1 REMARK SEQADV LINK
REVDAT 4 13-JUL-11 1C8S 1 VERSN
REVDAT 3 24-FEB-09 1C8S 1 VERSN
REVDAT 2 01-APR-03 1C8S 1 JRNL
REVDAT 1 20-OCT-99 1C8S 0
JRNL AUTH H.LUECKE,B.SCHOBERT,H.T.RICHTER,J.P.CARTAILLER,J.K.LANYI
JRNL TITL STRUCTURAL CHANGES IN BACTERIORHODOPSIN DURING ION TRANSPORT
JRNL TITL 2 AT 2 ANGSTROM RESOLUTION.
JRNL REF SCIENCE V. 286 255 1999
JRNL REFN ISSN 0036-8075
JRNL PMID 10514362
JRNL DOI 10.1126/SCIENCE.286.5438.255
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH H.LUECKE,B.SCHOBERT,H.-T.RICHTER,J.-P.CARTAILLER,J.K.LANYI
REMARK 1 TITL STRUCTURE OF BACTERIORHODOPSIN AT 1.55 ANGSTROM RESOLUTION
REMARK 1 REF J.MOL.BIOL. V. 291 899 1999
REMARK 1 REFN ISSN 0022-2836
REMARK 1 DOI 10.1006/JMBI.1999.3027
REMARK 1 REFERENCE 2
REMARK 1 AUTH H.LUECKE,H.-T.RICHTER,J.K.LANYI
REMARK 1 TITL PROTON TRANSFER PATHWAYS IN BACTERIORHODOPSIN AT 2.3
REMARK 1 TITL 2 ANGSTROM RESOLUTION
REMARK 1 REF SCIENCE V. 280 1934 1998
REMARK 1 REFN ISSN 0036-8075
REMARK 1 DOI 10.1126/SCIENCE.280.5371.1934
REMARK 2
REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : SHELXL-97
REMARK 3 AUTHORS : G.M.SHELDRICK
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 12.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 95.0
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : THIN RESOLUTION SHELLS
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF).
REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.173
REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.172
REMARK 3 FREE R VALUE (NO CUTOFF) : 0.219
REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 734
REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 14622
REMARK 3
REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F).
REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.208
REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.206
REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.255
REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 615
REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 11753
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 1510
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 297
REMARK 3 SOLVENT ATOMS : 14
REMARK 3
REMARK 3 MODEL REFINEMENT.
REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL
REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL
REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 0
REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 7288
REMARK 3 NUMBER OF RESTRAINTS : 7357
REMARK 3
REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES.
REMARK 3 BOND LENGTHS (A) : 0.007
REMARK 3 ANGLE DISTANCES (A) : 0.021
REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL
REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.261
REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.031
REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.032
REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.016
REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL
REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL
REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELING.
REMARK 3 METHOD USED: SHELXL-97 SWAT, BABINET'S PRINCIPLE
REMARK 3
REMARK 3 STEREOCHEMISTRY TARGET VALUES : NULL
REMARK 3 SPECIAL CASE: NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: MEROHEDRAL TWINNING RATIO OF 53:47
REMARK 4
REMARK 4 1C8S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-AUG-99.
REMARK 100 THE DEPOSITION ID IS D_1000009434.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : NULL; NULL
REMARK 200 TEMPERATURE (KELVIN) : 100; NULL
REMARK 200 PH : 5.6
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y; Y
REMARK 200 RADIATION SOURCE : ALS; ESRF
REMARK 200 BEAMLINE : 5.0.2; ID13
REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M
REMARK 200 WAVELENGTH OR RANGE (A) : 1; 1
REMARK 200 MONOCHROMATOR : NULL; NULL
REMARK 200 OPTICS : NULL; NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD; CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC; MAR CCD
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO
REMARK 200 DATA SCALING SOFTWARE : SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14622
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000
REMARK 200 RESOLUTION RANGE LOW (A) : 25.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0
REMARK 200 DATA REDUNDANCY : 7.600
REMARK 200 R MERGE (I) : 0.06900
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.2000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03
REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : 0.33000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: ISOMORPHOUS
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: PDB ENTRY 1C3W
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 54.18
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: MO:WATER:PHOSPHATE, PH 5.6, CUBIC
REMARK 280 LIPID PHASE, TEMPERATURE 296K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z
REMARK 290 3555 -X+Y,-X,Z
REMARK 290 4555 -X,-Y,Z+1/2
REMARK 290 5555 Y,-X+Y,Z+1/2
REMARK 290 6555 X-Y,X,Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.07800
REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 54.07800
REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.07800
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC
REMARK 350 SOFTWARE USED: PISA,PQS
REMARK 350 TOTAL BURIED SURFACE AREA: 26710 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 25350 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -233.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 30.31550
REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 52.50799
REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -30.31550
REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 52.50799
REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 PHE A 219 CB - CG - CD1 ANGL. DEV. = 4.2 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 VAL A 34 109.71 -56.81
REMARK 500 MET A 68 60.40 -115.61
REMARK 500 ASP A 102 80.73 35.67
REMARK 500 LEU A 152 46.22 -68.27
REMARK 500
REMARK 500 REMARK: NULL
REMARK 610
REMARK 610 MISSING HETEROATOM
REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 610 I=INSERTION CODE):
REMARK 610 M RES C SSEQI
REMARK 610 LI1 A 601
REMARK 610 LI1 A 602
REMARK 610 LI1 A 603
REMARK 610 LI1 A 605
REMARK 610 LI1 A 606
REMARK 610 LI1 A 607
REMARK 610 LI1 A 608
REMARK 610 LI1 A 609
REMARK 610 LI1 A 610
REMARK 610 LI1 A 612
REMARK 610 LI1 A 613
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LI1 A 601
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LI1 A 602
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LI1 A 603
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LI1 A 605
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LI1 A 606
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LI1 A 607
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LI1 A 608
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LI1 A 609
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LI1 A 610
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LI1 A 612
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LI1 A 613
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SQU A 701
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RET A 301
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1C3W RELATED DB: PDB
REMARK 900 BACTERIORHODOPSIN WILD TYPE AT 1.55 A RESOLUTION
DBREF 1C8S A 5 222 UNP P02945 BACR_HALN1 5 222
SEQADV 1C8S ASN A 96 UNP P02945 ASP 96 ENGINEERED MUTATION
SEQRES 1 A 196 THR GLY ARG PRO GLU TRP ILE TRP LEU ALA LEU GLY THR
SEQRES 2 A 196 ALA LEU MET GLY LEU GLY THR LEU TYR PHE LEU VAL LYS
SEQRES 3 A 196 GLY MET GLY VAL SER ASP PRO ASP ALA LYS LYS PHE TYR
SEQRES 4 A 196 ALA ILE THR THR LEU VAL PRO ALA ILE ALA PHE THR MET
SEQRES 5 A 196 TYR LEU SER MET LEU LEU GLY TYR GLY LEU THR MET VAL
SEQRES 6 A 196 PRO PHE GLY GLY GLU GLN ASN PRO ILE TYR TRP ALA ARG
SEQRES 7 A 196 TYR ALA ASP TRP LEU PHE THR THR PRO LEU LEU LEU LEU
SEQRES 8 A 196 ASN LEU ALA LEU LEU VAL ASP ALA ASP GLN GLY THR ILE
SEQRES 9 A 196 LEU ALA LEU VAL GLY ALA ASP GLY ILE MET ILE GLY THR
SEQRES 10 A 196 GLY LEU VAL GLY ALA LEU THR LYS VAL TYR SER TYR ARG
SEQRES 11 A 196 PHE VAL TRP TRP ALA ILE SER THR ALA ALA MET LEU TYR
SEQRES 12 A 196 ILE LEU TYR VAL LEU PHE ASN VAL THR VAL VAL LEU TRP
SEQRES 13 A 196 SER ALA TYR PRO VAL VAL TRP LEU ILE GLY SER GLU GLY
SEQRES 14 A 196 ALA GLY ILE VAL PRO LEU ASN ILE GLU THR LEU LEU PHE
SEQRES 15 A 196 MET VAL LEU ASP VAL SER ALA LYS VAL GLY PHE GLY LEU
SEQRES 16 A 196 ILE
HET LI1 A 601 32
HET LI1 A 602 41
HET LI1 A 603 18
HET LI1 A 605 8
HET LI1 A 606 8
HET LI1 A 607 38
HET LI1 A 608 18
HET LI1 A 609 16
HET LI1 A 610 40
HET LI1 A 612 18
HET LI1 A 613 13
HET SQU A 701 27
HET RET A 301 20
HETNAM LI1 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-
HETNAM 2 LI1 TRIMETHYLHEXADECAN-16-YL]GLYCEROL
HETNAM SQU 2,10,23-TRIMETHYL-TETRACOSANE
HETNAM RET RETINAL
HETSYN LI1 LIPID FRAGMENT
HETSYN SQU LIPID FRAGMENT
FORMUL 2 LI1 11(C42 H86 O3)
FORMUL 13 SQU C27 H56
FORMUL 14 RET C20 H28 O
FORMUL 15 HOH *14(H2 O)
HELIX 1 1 GLU A 9 MET A 32 1 24
HELIX 2 2 ASP A 36 LEU A 62 1 27
HELIX 3 3 TYR A 79 VAL A 101 1 23
HELIX 4 4 ASP A 104 THR A 128 1 25
HELIX 5 5 VAL A 130 LEU A 152 1 23
HELIX 6 6 ASN A 176 GLY A 192 1 17
HELIX 7 7 PRO A 200 VAL A 217 1 18
HELIX 8 8 VAL A 217 ILE A 222 1 6
SHEET 1 A 2 PRO A 70 PHE A 71 0
SHEET 2 A 2 GLU A 74 GLN A 75 -1 O GLU A 74 N PHE A 71
LINK NZ LYS A 216 C15 RET A 301 1555 1555 1.31
SITE 1 AC1 11 ILE A 11 PHE A 54 LEU A 58 LEU A 62
SITE 2 AC1 11 VAL A 136 ILE A 140 ALA A 143 LI1 A 606
SITE 3 AC1 11 LI1 A 608 LI1 A 612 SQU A 701
SITE 1 AC2 8 TRP A 12 TYR A 131 PHE A 135 TRP A 138
SITE 2 AC2 8 ALA A 139 ALA A 196 LI1 A 603 LI1 A 608
SITE 1 AC3 6 LEU A 190 ALA A 196 VAL A 199 PRO A 200
SITE 2 AC3 6 LI1 A 602 LI1 A 610
SITE 1 AC4 3 ALA A 18 LEU A 22 LI1 A 606
SITE 1 AC5 5 THR A 17 ALA A 18 LEU A 22 LI1 A 601
SITE 2 AC5 5 LI1 A 605
SITE 1 AC6 9 ILE A 52 MET A 56 TYR A 64 TRP A 80
SITE 2 AC6 9 LEU A 87 GLY A 116 ILE A 117 VAL A 124
SITE 3 AC6 9 LEU A 127
SITE 1 AC7 4 ILE A 222 LI1 A 601 LI1 A 602 SQU A 701
SITE 1 AC8 2 VAL A 177 LI1 A 610
SITE 1 AC9 8 ASN A 176 VAL A 179 VAL A 180 SER A 183
SITE 2 AC9 8 ALA A 184 VAL A 187 LI1 A 603 LI1 A 609
SITE 1 BC1 13 GLY A 21 THR A 24 LEU A 28 ALA A 44
SITE 2 BC1 13 THR A 47 LEU A 48 ALA A 51 PHE A 54
SITE 3 BC1 13 ALA A 110 ILE A 117 ALA A 144 TYR A 147
SITE 4 BC1 13 LI1 A 601
SITE 1 BC2 2 LEU A 87 LEU A 95
SITE 1 BC3 6 LEU A 25 TYR A 26 SER A 214 LEU A 221
SITE 2 BC3 6 LI1 A 601 LI1 A 608
SITE 1 BC4 11 TRP A 86 THR A 90 LEU A 93 GLY A 122
SITE 2 BC4 11 TRP A 138 SER A 141 TRP A 182 TYR A 185
SITE 3 BC4 11 ASP A 212 ALA A 215 LYS A 216
CRYST1 60.631 60.631 108.156 90.00 90.00 120.00 P 63 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016493 0.009522 0.000000 0.00000
SCALE2 0.000000 0.019045 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009246 0.00000