data_1CAP # _entry.id 1CAP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1CAP pdb_00001cap 10.2210/pdb1cap/pdb WWPDB D_1000172194 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1980-03-28 2 'Structure model' 1 1 2008-03-21 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2024-02-07 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' Other 10 4 'Structure model' 'Structure summary' 11 5 'Structure model' 'Data collection' 12 5 'Structure model' 'Database references' 13 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' database_PDB_caveat 4 4 'Structure model' entity 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_database_status 8 4 'Structure model' pdbx_entity_branch 9 4 'Structure model' pdbx_entity_branch_descriptor 10 4 'Structure model' pdbx_entity_branch_link 11 4 'Structure model' pdbx_entity_branch_list 12 4 'Structure model' pdbx_entity_nonpoly 13 4 'Structure model' pdbx_nonpoly_scheme 14 4 'Structure model' pdbx_struct_assembly 15 4 'Structure model' pdbx_struct_oper_list 16 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 17 4 'Structure model' pdbx_validate_chiral 18 4 'Structure model' pdbx_validate_symm_contact 19 4 'Structure model' struct_asym 20 4 'Structure model' struct_conn 21 4 'Structure model' struct_ref 22 4 'Structure model' struct_ref_seq 23 4 'Structure model' struct_site 24 4 'Structure model' struct_site_gen 25 5 'Structure model' chem_comp 26 5 'Structure model' chem_comp_atom 27 5 'Structure model' chem_comp_bond 28 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.Cartn_x' 2 4 'Structure model' '_atom_site.Cartn_y' 3 4 'Structure model' '_atom_site.Cartn_z' 4 4 'Structure model' '_atom_site.auth_atom_id' 5 4 'Structure model' '_atom_site.auth_comp_id' 6 4 'Structure model' '_atom_site.auth_seq_id' 7 4 'Structure model' '_atom_site.label_asym_id' 8 4 'Structure model' '_atom_site.label_atom_id' 9 4 'Structure model' '_atom_site.label_comp_id' 10 4 'Structure model' '_atom_site.label_entity_id' 11 4 'Structure model' '_atom_site.type_symbol' 12 4 'Structure model' '_chem_comp.mon_nstd_flag' 13 4 'Structure model' '_chem_comp.name' 14 4 'Structure model' '_chem_comp.type' 15 4 'Structure model' '_pdbx_database_status.process_site' 16 4 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.auth_seq_id' 17 4 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_seq_id' 18 4 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 19 4 'Structure model' '_pdbx_validate_symm_contact.auth_atom_id_1' 20 4 'Structure model' '_pdbx_validate_symm_contact.auth_atom_id_2' 21 4 'Structure model' '_pdbx_validate_symm_contact.auth_comp_id_1' 22 4 'Structure model' '_pdbx_validate_symm_contact.auth_comp_id_2' 23 4 'Structure model' '_pdbx_validate_symm_contact.auth_seq_id_1' 24 4 'Structure model' '_pdbx_validate_symm_contact.auth_seq_id_2' 25 4 'Structure model' '_pdbx_validate_symm_contact.site_symmetry_2' 26 4 'Structure model' '_struct_conn.pdbx_dist_value' 27 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 28 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 5 'Structure model' '_chem_comp.pdbx_synonyms' 39 5 'Structure model' '_database_2.pdbx_DOI' 40 5 'Structure model' '_database_2.pdbx_database_accession' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'GAL A 5 HAS WRONG CHIRALITY AT ATOM C1' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1CAP _pdbx_database_status.recvd_initial_deposition_date 1978-05-23 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Arnott, S.' _audit_author.pdbx_ordinal 1 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Conformation and molecular organization in fibers of the capsular polysaccharide from Escherichia coli M41 mutant.' J.Mol.Biol. 109 373 391 1977 JMOBAK UK 0022-2836 0070 ? 319241 '10.1016/S0022-2836(77)80018-1' 1 ;Lals, a Linked-Atom Least-Squares Reciprocal-Space Refinement System Incorporating Stereochemical Restraints to Supplement Sparse Diffraction Data ; 'Acta Crystallogr.,Sect.A' 34 3 ? 1978 ACACEQ DK 0108-7673 0621 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Moorhouse, R.' 1 ? primary 'Winter, W.T.' 2 ? primary 'Arnott, S.' 3 ? primary 'Bayer, M.E.' 4 ? 1 'Smith, P.J.C.' 5 ? 1 'Arnott, S.' 6 ? # _entity.id 1 _entity.type branched _entity.src_method man _entity.pdbx_description ;alpha-D-mannopyranose-(1-3)-beta-D-glucopyranose-(1-3)-[4,6-O-[(1S)-1-carboxyethylidene]-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-4)]beta-D-glucopyranuronic acid-(1-3)-beta-D-galactopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-glucopyranose-(1-3)-[4,6-O-[(1S)-1-carboxyethylidene]-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-4)]beta-D-glucopyranuronic acid-(1-3)-beta-D-galactopyranose ; _entity.formula_weight 2131.765 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _pdbx_entity_branch.entity_id 1 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 1 ;WURCS=2.0/5,12,11/[a2112h-1b_1-5][a2122A-1b_1-5][a2122h-1b_1-5][a1122h-1a_1-5][a2122h-1b_1-5_4n2-6n1*1OC^RO*2/3CO/6=O/3C]/1-2-3-4-1-2-3-4-4-5-4-5/a3-b1_b3-c1_b4-k1_c3-d1_d2-e1_e3-f1_f3-g1_f4-i1_g3-h1_i2-j1_k2-l1 ; WURCS PDB2Glycan 1.1.0 2 1 ;[][D-1-deoxy-Galp]{[(3+1)][b-D-GlcpA]{[(3+1)][b-D-Glcp]{[(3+1)][a-D-Manp]{[(2+1)][a-D-Galp]{[(3+1)][b-D-GlcpA]{[(3+1)][b-D-Glcp]{[(3+1)][a-D-Manp]{}}[(4+1)][a-D-Manp]{[(2+1)]{}}}}}}[(4+1)][a-D-Manp]{[(2+1)]{}}}} ; LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 1 2 BDP C1 O1 1 GAL O3 HO3 sing ? 2 1 3 BGC C1 O1 2 BDP O3 HO3 sing ? 3 1 4 MAN C1 O1 3 BGC O3 HO3 sing ? 4 1 5 GAL C1 O1 4 MAN O2 HO2 sing ? 5 1 6 BDP C1 O1 5 GAL O3 HO3 sing ? 6 1 7 BGC C1 O1 6 BDP O3 HO3 sing ? 7 1 8 MAN C1 O1 7 BGC O3 HO3 sing ? 8 1 9 MAN C1 O1 6 BDP O4 HO4 sing ? 9 1 10 CEG C1 O1 9 MAN O2 HO2 sing ? 10 1 11 MAN C1 O1 2 BDP O4 HO4 sing ? 11 1 12 CEG C1 O1 11 MAN O2 HO2 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight BDP 'D-saccharide, beta linking' . 'beta-D-glucopyranuronic acid' 'beta-D-glucuronic acid; D-glucuronic acid; glucuronic acid' 'C6 H10 O7' 194.139 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 CEG 'D-saccharide, beta linking' n '4,6-O-[(1S)-1-carboxyethylidene]-beta-D-glucopyranose' ;4,6-O-(1-CARBOXYETHYLIDENE)-BETA-D-GLUCOSE; 4,6-O-[(1S)-1-carboxyethylidene]-beta-D-glucose; 4,6-O-[(1S)-1-carboxyethylidene]-D-glucose; 4,6-O-[(1S)-1-carboxyethylidene]-glucose ; 'C9 H14 O8' 250.203 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BDP 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpAb BDP 'COMMON NAME' GMML 1.0 'b-D-glucopyranuronic acid' BDP 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpA BDP 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcA BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero A 1 GAL 1 A GAL 1 ? GAL 10 n A 1 BDP 2 A BDP 2 ? GCU 9 n A 1 BGC 3 A BGC 3 ? GLC 8 n A 1 MAN 4 A MAN 4 ? MAN 7 n A 1 GAL 5 A GAL 5 ? GAL 4 n A 1 BDP 6 A BDP 6 ? GCU 3 n A 1 BGC 7 A BGC 7 ? GLC 2 n A 1 MAN 8 A MAN 8 ? MAN 1 n A 1 MAN 9 A MAN 9 ? MAN 5 n A 1 CEG 10 A CEG 10 ? CEG 6 n A 1 MAN 11 A MAN 11 ? MAN 11 n A 1 CEG 12 A CEG 12 ? CEG 12 n # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag N _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id GAL _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id O1 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id GAL _pdbx_unobs_or_zero_occ_atoms.label_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.label_atom_id O1 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal LINKED-ATOM refinement 'LEAST-SQUARES MODEL-BUILDING PROCEDURE' ? 1 LALS refinement . ? 2 # _cell.entry_id 1CAP _cell.length_a 20.300 _cell.length_b 11.780 _cell.length_c 30.440 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1CAP _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1CAP _exptl.method 'FIBER DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1CAP _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 3.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;THE SPACE GROUP USED IN THE ANALYSIS OF THIS STRUCTURE IS P 21 21 21 IN A NON-STANDARD SETTING. THE EQUIPOINTS FOR THIS GROUP IN THE SETTING USED ARE- X,Y,Z -X,-Y,1/2+Z -X,1/2+Y,1/2-Z 1/2+X,1/2-Y,-Z ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'FIBER DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'FIBER DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 144 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 144 _refine_hist.d_res_high 3.0 _refine_hist.d_res_low . # _database_PDB_matrix.entry_id 1CAP _database_PDB_matrix.origx[1][1] .100000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] .100000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] .100000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1CAP _struct.title 'CONFORMATION AND MOLECULAR ORGANIZATION IN FIBERS OF THE CAPSULAR POLYSACCHARIDE FROM ESCHERICHIA COLI M41 MUTANT' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1CAP _struct_keywords.pdbx_keywords 'BACTERIAL ENCAPSULATION' _struct_keywords.text 'BACTERIAL ENCAPSULATION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details ? _pdbx_struct_assembly.oligomeric_count ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;A 21 SCREW AXIS PARALLEL TO Z PASSES THROUGH X=0,Y=0 AND THE 21 AXIS PARALLEL TO X IS IN THE Z=0 PLANE. THE SCREW AXIS PARALLEL TO Z WAS USED TO GENERATE THE TWELVE-RESIDUE SEGMENT FROM THE PUBLISHED COORDINATES FOR THE SIX-RESIDUE ASYMMETRIC UNIT. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GAL . O3 ? ? ? 1_555 A BDP . C1 ? ? A GAL 1 A BDP 2 1_555 ? ? ? ? ? ? ? 1.389 ? ? covale2 covale both ? A BDP . O3 ? ? ? 1_555 A BGC . C1 ? ? A BDP 2 A BGC 3 1_555 ? ? ? ? ? ? ? 1.390 ? ? covale3 covale both ? A BDP . O4 ? ? ? 1_555 A MAN . C1 ? ? A BDP 2 A MAN 11 1_555 ? ? ? ? ? ? ? 1.428 ? ? covale4 covale both ? A BGC . O3 ? ? ? 1_555 A MAN . C1 ? ? A BGC 3 A MAN 4 1_555 ? ? ? ? ? ? ? 1.416 ? ? covale5 covale both ? A MAN . O2 ? ? ? 1_555 A GAL . C1 ? ? A MAN 4 A GAL 5 1_555 ? ? ? ? ? ? ? 1.414 ? ? covale6 covale both ? A GAL . O3 ? ? ? 1_555 A BDP . C1 ? ? A GAL 5 A BDP 6 1_555 ? ? ? ? ? ? ? 1.389 ? ? covale7 covale both ? A BDP . O3 ? ? ? 1_555 A BGC . C1 ? ? A BDP 6 A BGC 7 1_555 ? ? ? ? ? ? ? 1.390 ? ? covale8 covale both ? A BDP . O4 ? ? ? 1_555 A MAN . C1 ? ? A BDP 6 A MAN 9 1_555 ? ? ? ? ? ? ? 1.428 ? ? covale9 covale both ? A BGC . O3 ? ? ? 1_555 A MAN . C1 ? ? A BGC 7 A MAN 8 1_555 ? ? ? ? ? ? ? 1.416 ? ? covale10 covale both ? A MAN . O2 ? ? ? 1_555 A CEG . C1 ? ? A MAN 9 A CEG 10 1_555 ? ? ? ? ? ? ? 1.388 ? ? covale11 covale both ? A MAN . O2 ? ? ? 1_555 A CEG . C1 ? ? A MAN 11 A CEG 12 1_555 ? ? ? ? ? ? ? 1.388 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 C2 A MAN 4 ? ? 1_555 C2 A MAN 8 ? ? 3_556 0.62 2 1 C4 A GAL 5 ? ? 1_555 O4 A BGC 7 ? ? 3_556 0.62 3 1 C4 A GAL 1 ? ? 1_555 O4 A BGC 3 ? ? 3_545 0.62 4 1 C1 A BGC 7 ? ? 1_555 O4 A MAN 9 ? ? 3_556 0.63 5 1 C1 A BGC 3 ? ? 1_555 O4 A MAN 11 ? ? 3_545 0.63 6 1 C1 A GAL 5 ? ? 1_555 C1 A MAN 8 ? ? 3_556 0.68 7 1 C1 A GAL 1 ? ? 1_555 C1 A MAN 4 ? ? 3_545 0.68 8 1 H62 A MAN 8 ? ? 1_555 C9 A CEG 12 ? ? 3_546 0.68 9 1 H62 A MAN 4 ? ? 1_555 C9 A CEG 10 ? ? 3_556 0.68 10 1 H1 A GAL 5 ? ? 1_555 O5 A MAN 8 ? ? 3_556 0.72 11 1 H1 A GAL 1 ? ? 1_555 O5 A MAN 4 ? ? 3_545 0.72 12 1 O5 A GAL 5 ? ? 1_555 H1 A MAN 8 ? ? 3_556 0.74 13 1 O5 A GAL 1 ? ? 1_555 H1 A MAN 4 ? ? 3_545 0.74 14 1 H62 A MAN 4 ? ? 1_555 H9A A CEG 10 ? ? 3_556 0.75 15 1 H62 A MAN 8 ? ? 1_555 H9A A CEG 12 ? ? 3_546 0.75 16 1 H2 A GAL 1 ? ? 1_555 C2 A BGC 3 ? ? 3_545 0.78 17 1 H2 A GAL 5 ? ? 1_555 C2 A BGC 7 ? ? 3_556 0.78 18 1 C6 A GAL 1 ? ? 1_555 O6 A GAL 5 ? ? 3_545 0.82 19 1 O6 A GAL 1 ? ? 1_555 C6 A GAL 5 ? ? 3_545 0.82 20 1 C2 A GAL 5 ? ? 1_555 O3 A BGC 7 ? ? 3_556 0.83 21 1 C2 A GAL 1 ? ? 1_555 O3 A BGC 3 ? ? 3_545 0.83 22 1 C4 A GAL 1 ? ? 1_555 C4 A BGC 3 ? ? 3_545 0.83 23 1 C4 A GAL 5 ? ? 1_555 C4 A BGC 7 ? ? 3_556 0.83 24 1 C2 A MAN 4 ? ? 1_555 O2 A MAN 8 ? ? 3_556 0.84 25 1 O2 A MAN 4 ? ? 1_555 C2 A MAN 8 ? ? 3_556 0.84 26 1 C3 A GAL 1 ? ? 1_555 H4 A BGC 3 ? ? 3_545 0.87 27 1 C3 A GAL 5 ? ? 1_555 H4 A BGC 7 ? ? 3_556 0.87 28 1 C1 A GAL 1 ? ? 1_555 O3 A BGC 3 ? ? 3_545 0.87 29 1 C1 A GAL 5 ? ? 1_555 O3 A BGC 7 ? ? 3_556 0.87 30 1 H2 A GAL 5 ? ? 1_555 C3 A BGC 7 ? ? 3_556 0.90 31 1 H2 A GAL 1 ? ? 1_555 C3 A BGC 3 ? ? 3_545 0.90 32 1 O3 A MAN 4 ? ? 1_555 O3 A MAN 8 ? ? 3_556 0.92 33 1 O2 A BDP 6 ? ? 1_555 C2 A MAN 9 ? ? 3_556 0.97 34 1 O2 A BDP 2 ? ? 1_555 C2 A MAN 11 ? ? 3_545 0.97 35 1 C3 A BDP 6 ? ? 1_555 O3 A MAN 9 ? ? 3_556 0.97 36 1 C3 A BDP 2 ? ? 1_555 O3 A MAN 11 ? ? 3_545 0.97 37 1 O6 A GAL 1 ? ? 1_555 H62 A GAL 5 ? ? 3_545 0.98 38 1 H62 A GAL 1 ? ? 1_555 O6 A GAL 5 ? ? 3_545 0.98 39 1 C2 A GAL 1 ? ? 1_555 C3 A BGC 3 ? ? 3_545 0.98 40 1 C2 A GAL 5 ? ? 1_555 C3 A BGC 7 ? ? 3_556 0.98 41 1 H4 A GAL 5 ? ? 1_555 O4 A BGC 7 ? ? 3_556 1.02 42 1 H4 A GAL 1 ? ? 1_555 O4 A BGC 3 ? ? 3_545 1.02 43 1 O3 A GAL 5 ? ? 1_555 H4 A BGC 7 ? ? 3_556 1.03 44 1 O3 A GAL 1 ? ? 1_555 H4 A BGC 3 ? ? 3_545 1.03 45 1 C2 A BDP 2 ? ? 1_555 C3 A MAN 11 ? ? 3_545 1.04 46 1 C2 A BDP 6 ? ? 1_555 C3 A MAN 9 ? ? 3_556 1.04 47 1 C3 A MAN 4 ? ? 1_555 O3 A MAN 8 ? ? 3_556 1.05 48 1 O3 A MAN 4 ? ? 1_555 C3 A MAN 8 ? ? 3_556 1.05 49 1 O4 A GAL 1 ? ? 1_555 H5 A BGC 3 ? ? 3_545 1.06 50 1 O4 A GAL 5 ? ? 1_555 H5 A BGC 7 ? ? 3_556 1.06 51 1 O5 A BGC 3 ? ? 1_555 O4 A MAN 11 ? ? 3_545 1.09 52 1 O5 A BGC 7 ? ? 1_555 O4 A MAN 9 ? ? 3_556 1.09 53 1 C2 A BDP 2 ? ? 1_555 H3 A MAN 11 ? ? 3_545 1.09 54 1 C2 A BDP 6 ? ? 1_555 H3 A MAN 9 ? ? 3_556 1.09 55 1 C3 A BDP 2 ? ? 1_555 C3 A MAN 11 ? ? 3_545 1.10 56 1 C3 A BDP 6 ? ? 1_555 C3 A MAN 9 ? ? 3_556 1.10 57 1 H1 A BGC 7 ? ? 1_555 O4 A MAN 9 ? ? 3_556 1.10 58 1 H1 A BGC 3 ? ? 1_555 O4 A MAN 11 ? ? 3_545 1.10 59 1 O4 A GAL 1 ? ? 1_555 C5 A BGC 3 ? ? 3_545 1.11 60 1 O4 A GAL 5 ? ? 1_555 C5 A BGC 7 ? ? 3_556 1.11 61 1 O6 A BGC 3 ? ? 1_555 O3 A CEG 10 ? ? 2_454 1.11 62 1 O6 A BGC 7 ? ? 1_555 O3 A CEG 12 ? ? 2_555 1.11 63 1 C1 A MAN 4 ? ? 1_555 O2 A MAN 8 ? ? 3_556 1.12 64 1 O2 A MAN 4 ? ? 1_555 C1 A MAN 8 ? ? 3_556 1.12 65 1 H3 A GAL 5 ? ? 1_555 H5 A CEG 10 ? ? 3_556 1.13 66 1 H3 A GAL 1 ? ? 1_555 H5 A CEG 12 ? ? 3_545 1.13 67 1 C5 A MAN 8 ? ? 1_555 H9B A CEG 12 ? ? 3_546 1.13 68 1 C5 A MAN 4 ? ? 1_555 H9B A CEG 10 ? ? 3_556 1.13 69 1 H3 A BDP 6 ? ? 1_555 O3 A MAN 9 ? ? 3_556 1.15 70 1 H3 A BDP 2 ? ? 1_555 O3 A MAN 11 ? ? 3_545 1.15 71 1 C3 A GAL 1 ? ? 1_555 C4 A BGC 3 ? ? 3_545 1.19 72 1 C3 A GAL 5 ? ? 1_555 C4 A BGC 7 ? ? 3_556 1.19 73 1 O6 A GAL 1 ? ? 1_555 O6 A GAL 5 ? ? 3_545 1.19 74 1 O3 A GAL 1 ? ? 1_555 H2 A MAN 11 ? ? 3_545 1.22 75 1 O3 A GAL 5 ? ? 1_555 H2 A MAN 9 ? ? 3_556 1.22 76 1 H2 A MAN 4 ? ? 1_555 O2 A MAN 8 ? ? 3_556 1.24 77 1 O2 A MAN 4 ? ? 1_555 H2 A MAN 8 ? ? 3_556 1.24 78 1 O2 A BDP 2 ? ? 1_555 C1 A MAN 11 ? ? 3_545 1.24 79 1 O2 A BDP 6 ? ? 1_555 C1 A MAN 9 ? ? 3_556 1.24 80 1 C5 A GAL 1 ? ? 1_555 O4 A BGC 3 ? ? 3_545 1.25 81 1 C5 A GAL 5 ? ? 1_555 O4 A BGC 7 ? ? 3_556 1.25 82 1 O4 A GAL 1 ? ? 1_555 C4 A BGC 3 ? ? 3_545 1.25 83 1 O4 A GAL 5 ? ? 1_555 C4 A BGC 7 ? ? 3_556 1.25 84 1 C1 A BDP 2 ? ? 1_555 H2 A MAN 11 ? ? 3_545 1.27 85 1 C1 A BDP 6 ? ? 1_555 H2 A MAN 9 ? ? 3_556 1.27 86 1 H1 A GAL 5 ? ? 1_555 C1 A MAN 8 ? ? 3_556 1.29 87 1 H1 A GAL 1 ? ? 1_555 C1 A MAN 4 ? ? 3_545 1.29 88 1 H4 A MAN 4 ? ? 1_555 O4 A CEG 10 ? ? 3_556 1.30 89 1 H4 A MAN 8 ? ? 1_555 O4 A CEG 12 ? ? 3_546 1.30 90 1 H2 A BDP 2 ? ? 1_555 H3 A MAN 11 ? ? 3_545 1.32 91 1 H2 A BDP 6 ? ? 1_555 H3 A MAN 9 ? ? 3_556 1.32 92 1 C4 A MAN 8 ? ? 1_555 H9B A CEG 12 ? ? 3_546 1.32 93 1 C4 A MAN 4 ? ? 1_555 H9B A CEG 10 ? ? 3_556 1.32 94 1 H3 A BDP 6 ? ? 1_555 C3 A MAN 9 ? ? 3_556 1.32 95 1 H3 A BDP 2 ? ? 1_555 C3 A MAN 11 ? ? 3_545 1.32 96 1 C3 A BDP 2 ? ? 1_555 H3 A MAN 11 ? ? 3_545 1.36 97 1 C3 A BDP 6 ? ? 1_555 H3 A MAN 9 ? ? 3_556 1.36 98 1 C6 A MAN 8 ? ? 1_555 H9A A CEG 12 ? ? 3_546 1.36 99 1 C6 A MAN 4 ? ? 1_555 H9A A CEG 10 ? ? 3_556 1.36 100 1 H1 A GAL 5 ? ? 1_555 C5 A MAN 8 ? ? 3_556 1.37 101 1 H1 A GAL 1 ? ? 1_555 C5 A MAN 4 ? ? 3_545 1.37 102 1 O2 A BDP 6 ? ? 1_555 C3 A MAN 9 ? ? 3_556 1.39 103 1 O2 A BDP 2 ? ? 1_555 C3 A MAN 11 ? ? 3_545 1.39 104 1 C6 A MAN 8 ? ? 1_555 H9B A CEG 12 ? ? 3_546 1.39 105 1 C6 A MAN 4 ? ? 1_555 H9B A CEG 10 ? ? 3_556 1.39 106 1 O5 A GAL 5 ? ? 1_555 C1 A MAN 8 ? ? 3_556 1.40 107 1 O5 A GAL 1 ? ? 1_555 C1 A MAN 4 ? ? 3_545 1.40 108 1 H1 A BDP 2 ? ? 1_555 O2 A MAN 11 ? ? 3_545 1.40 109 1 H1 A BDP 6 ? ? 1_555 O2 A MAN 9 ? ? 3_556 1.40 110 1 C1 A GAL 1 ? ? 1_555 O2 A MAN 8 ? ? 1_554 1.41 111 1 H1 A BDP 6 ? ? 1_555 O5 A CEG 10 ? ? 3_556 1.43 112 1 H1 A BDP 2 ? ? 1_555 O5 A CEG 12 ? ? 3_545 1.43 113 1 H1 A BDP 6 ? ? 1_555 C1 A CEG 10 ? ? 3_556 1.43 114 1 H1 A BDP 2 ? ? 1_555 C1 A CEG 12 ? ? 3_545 1.43 115 1 C3 A MAN 4 ? ? 1_555 C3 A MAN 8 ? ? 3_556 1.44 116 1 C4 A BDP 2 ? ? 1_555 O3 A MAN 11 ? ? 3_545 1.44 117 1 C4 A BDP 6 ? ? 1_555 O3 A MAN 9 ? ? 3_556 1.44 118 1 H3 A BDP 2 ? ? 1_555 C4 A MAN 11 ? ? 3_545 1.44 119 1 H3 A BDP 6 ? ? 1_555 C4 A MAN 9 ? ? 3_556 1.44 120 1 C1 A GAL 5 ? ? 1_555 H1 A MAN 8 ? ? 3_556 1.45 121 1 C1 A GAL 1 ? ? 1_555 H1 A MAN 4 ? ? 3_545 1.45 122 1 H62 A MAN 8 ? ? 1_555 C7 A CEG 12 ? ? 3_546 1.48 123 1 H62 A MAN 4 ? ? 1_555 C7 A CEG 10 ? ? 3_556 1.48 124 1 C2 A BDP 2 ? ? 1_555 C2 A MAN 11 ? ? 3_545 1.49 125 1 C2 A BDP 6 ? ? 1_555 C2 A MAN 9 ? ? 3_556 1.49 126 1 H1 A BGC 7 ? ? 1_555 C4 A MAN 9 ? ? 3_556 1.50 127 1 H1 A BGC 3 ? ? 1_555 C4 A MAN 11 ? ? 3_545 1.50 128 1 C4 A GAL 1 ? ? 1_555 H4 A BGC 3 ? ? 3_545 1.50 129 1 C4 A GAL 5 ? ? 1_555 H4 A BGC 7 ? ? 3_556 1.50 130 1 C2 A BDP 6 ? ? 1_555 H2 A MAN 9 ? ? 3_556 1.51 131 1 C2 A BDP 2 ? ? 1_555 H2 A MAN 11 ? ? 3_545 1.51 132 1 O3 A BDP 6 ? ? 1_555 H3 A MAN 9 ? ? 3_556 1.51 133 1 O3 A BDP 2 ? ? 1_555 H3 A MAN 11 ? ? 3_545 1.51 134 1 C2 A MAN 4 ? ? 1_555 H2 A MAN 8 ? ? 3_556 1.51 135 1 H2 A MAN 4 ? ? 1_555 C2 A MAN 8 ? ? 3_556 1.51 136 1 C1 A GAL 5 ? ? 1_555 O5 A MAN 8 ? ? 3_556 1.54 137 1 C1 A GAL 1 ? ? 1_555 O5 A MAN 4 ? ? 3_545 1.54 138 1 H2 A GAL 1 ? ? 1_555 O2 A BGC 3 ? ? 3_545 1.54 139 1 H2 A GAL 5 ? ? 1_555 O2 A BGC 7 ? ? 3_556 1.54 140 1 C5 A GAL 5 ? ? 1_555 H1 A MAN 8 ? ? 3_556 1.55 141 1 C5 A GAL 1 ? ? 1_555 H1 A MAN 4 ? ? 3_545 1.55 142 1 C6 A MAN 8 ? ? 1_555 C9 A CEG 12 ? ? 3_546 1.55 143 1 C6 A MAN 4 ? ? 1_555 C9 A CEG 10 ? ? 3_556 1.55 144 1 C4 A MAN 4 ? ? 1_555 O3 A MAN 8 ? ? 3_556 1.56 145 1 O3 A MAN 4 ? ? 1_555 C4 A MAN 8 ? ? 3_556 1.56 146 1 C3 A GAL 5 ? ? 1_555 C3 A BGC 7 ? ? 3_556 1.57 147 1 C3 A GAL 1 ? ? 1_555 C3 A BGC 3 ? ? 3_545 1.57 148 1 O3 A BGC 3 ? ? 1_555 O2 A MAN 8 ? ? 3_556 1.58 149 1 O2 A MAN 4 ? ? 1_555 O3 A BGC 7 ? ? 3_556 1.58 150 1 O3 A BDP 2 ? ? 1_555 O4 A MAN 11 ? ? 3_545 1.59 151 1 O3 A BDP 6 ? ? 1_555 O4 A MAN 9 ? ? 3_556 1.59 152 1 O2 A BDP 2 ? ? 1_555 H3 A MAN 11 ? ? 3_545 1.60 153 1 O2 A BDP 6 ? ? 1_555 H3 A MAN 9 ? ? 3_556 1.60 154 1 C2 A GAL 1 ? ? 1_555 C2 A BGC 3 ? ? 3_545 1.61 155 1 C2 A GAL 5 ? ? 1_555 C2 A BGC 7 ? ? 3_556 1.61 156 1 O4 A GAL 5 ? ? 1_555 O4 A BGC 7 ? ? 3_556 1.61 157 1 O4 A GAL 1 ? ? 1_555 O4 A BGC 3 ? ? 3_545 1.61 158 1 O6 A MAN 4 ? ? 1_555 O6 A CEG 10 ? ? 3_556 1.62 159 1 O6 A MAN 8 ? ? 1_555 O6 A CEG 12 ? ? 3_546 1.62 160 1 C2 A BDP 6 ? ? 1_555 O3 A MAN 9 ? ? 3_556 1.65 161 1 C2 A BDP 2 ? ? 1_555 O3 A MAN 11 ? ? 3_545 1.65 162 1 O2 A BDP 2 ? ? 1_555 O4 A BDP 2 ? ? 3_545 1.65 163 1 O2 A BDP 6 ? ? 1_555 O4 A BDP 6 ? ? 3_556 1.65 164 1 C2 A MAN 4 ? ? 1_555 C3 A MAN 8 ? ? 3_556 1.73 165 1 C3 A MAN 4 ? ? 1_555 C2 A MAN 8 ? ? 3_556 1.73 166 1 C3 A MAN 4 ? ? 1_555 O2 A MAN 8 ? ? 3_556 1.75 167 1 O2 A MAN 4 ? ? 1_555 C3 A MAN 8 ? ? 3_556 1.75 168 1 C3 A GAL 5 ? ? 1_555 O3 A BGC 7 ? ? 3_556 1.75 169 1 C3 A GAL 1 ? ? 1_555 O3 A BGC 3 ? ? 3_545 1.75 170 1 O3 A GAL 5 ? ? 1_555 C4 A BGC 7 ? ? 3_556 1.76 171 1 O3 A GAL 1 ? ? 1_555 C4 A BGC 3 ? ? 3_545 1.76 172 1 O2 A GAL 5 ? ? 1_555 O3 A BGC 7 ? ? 3_556 1.77 173 1 O2 A GAL 1 ? ? 1_555 O3 A BGC 3 ? ? 3_545 1.77 174 1 C5 A BDP 2 ? ? 1_555 O3 A MAN 11 ? ? 3_545 1.77 175 1 C5 A BDP 6 ? ? 1_555 O3 A MAN 9 ? ? 3_556 1.77 176 1 C1 A BDP 2 ? ? 1_555 C2 A MAN 11 ? ? 3_545 1.77 177 1 C1 A BDP 6 ? ? 1_555 C2 A MAN 9 ? ? 3_556 1.77 178 1 O8B A CEG 10 ? ? 1_555 O8B A CEG 12 ? ? 3_536 1.80 179 1 C2 A MAN 4 ? ? 1_555 C1 A MAN 8 ? ? 3_556 1.81 180 1 C1 A MAN 4 ? ? 1_555 C2 A MAN 8 ? ? 3_556 1.81 181 1 C1 A GAL 1 ? ? 1_555 C3 A BGC 3 ? ? 3_545 1.81 182 1 C1 A GAL 5 ? ? 1_555 C3 A BGC 7 ? ? 3_556 1.81 183 1 C5 A GAL 1 ? ? 1_555 O6 A GAL 5 ? ? 3_545 1.86 184 1 O6 A GAL 1 ? ? 1_555 C5 A GAL 5 ? ? 3_545 1.86 185 1 C1 A BGC 7 ? ? 1_555 C4 A MAN 9 ? ? 3_556 1.86 186 1 C1 A BGC 3 ? ? 1_555 C4 A MAN 11 ? ? 3_545 1.86 187 1 O5 A GAL 1 ? ? 1_555 O3 A BGC 3 ? ? 3_545 1.94 188 1 O5 A GAL 5 ? ? 1_555 O3 A BGC 7 ? ? 3_556 1.94 189 1 O3 A BDP 6 ? ? 1_555 C3 A MAN 9 ? ? 3_556 1.94 190 1 O3 A BDP 2 ? ? 1_555 C3 A MAN 11 ? ? 3_545 1.94 191 1 C1 A BDP 2 ? ? 1_555 O3 A MAN 11 ? ? 3_545 1.94 192 1 C1 A BDP 6 ? ? 1_555 O3 A MAN 9 ? ? 3_556 1.94 193 1 C4 A GAL 1 ? ? 1_555 C3 A BGC 3 ? ? 3_545 1.94 194 1 C4 A GAL 5 ? ? 1_555 C3 A BGC 7 ? ? 3_556 1.94 195 1 O4 A MAN 4 ? ? 1_555 C9 A CEG 10 ? ? 3_556 1.95 196 1 O4 A MAN 8 ? ? 1_555 C9 A CEG 12 ? ? 3_546 1.95 197 1 C3 A BDP 2 ? ? 1_555 C4 A MAN 11 ? ? 3_545 1.96 198 1 C3 A BDP 6 ? ? 1_555 C4 A MAN 9 ? ? 3_556 1.96 199 1 C6 A GAL 1 ? ? 1_555 C6 A GAL 5 ? ? 3_545 1.99 200 1 C6 A GAL 1 ? ? 1_555 O4 A BGC 3 ? ? 3_545 2.00 201 1 C6 A GAL 5 ? ? 1_555 O4 A BGC 7 ? ? 3_556 2.00 202 1 O4 A MAN 4 ? ? 1_555 O3 A MAN 8 ? ? 3_556 2.01 203 1 O3 A MAN 4 ? ? 1_555 O4 A MAN 8 ? ? 3_556 2.01 204 1 C1 A GAL 5 ? ? 1_555 C2 A MAN 8 ? ? 3_556 2.04 205 1 C1 A GAL 1 ? ? 1_555 C2 A MAN 4 ? ? 3_545 2.04 206 1 O5 A GAL 1 ? ? 1_555 C3 A BGC 3 ? ? 3_545 2.04 207 1 O5 A GAL 5 ? ? 1_555 C3 A BGC 7 ? ? 3_556 2.04 208 1 C4 A GAL 1 ? ? 1_555 C5 A BGC 3 ? ? 3_545 2.06 209 1 C4 A GAL 5 ? ? 1_555 C5 A BGC 7 ? ? 3_556 2.06 210 1 O3 A BDP 2 ? ? 1_555 C4 A MAN 11 ? ? 3_545 2.08 211 1 O3 A BDP 6 ? ? 1_555 C4 A MAN 9 ? ? 3_556 2.08 212 1 O4 A GAL 5 ? ? 1_555 C3 A BGC 7 ? ? 3_556 2.08 213 1 O4 A GAL 1 ? ? 1_555 C3 A BGC 3 ? ? 3_545 2.08 214 1 O2 A BDP 2 ? ? 1_555 O5 A MAN 11 ? ? 3_545 2.08 215 1 O2 A BDP 6 ? ? 1_555 O5 A MAN 9 ? ? 3_556 2.08 216 1 O6 A BGC 3 ? ? 1_555 C3 A CEG 10 ? ? 2_454 2.08 217 1 O6 A BGC 7 ? ? 1_555 C3 A CEG 12 ? ? 2_555 2.08 218 1 C2 A BGC 7 ? ? 1_555 O4 A MAN 9 ? ? 3_556 2.09 219 1 C2 A BGC 3 ? ? 1_555 O4 A MAN 11 ? ? 3_545 2.09 220 1 C3 A GAL 5 ? ? 1_555 O4 A BGC 7 ? ? 3_556 2.10 221 1 C3 A GAL 1 ? ? 1_555 O4 A BGC 3 ? ? 3_545 2.10 222 1 C5 A BGC 7 ? ? 1_555 O4 A MAN 9 ? ? 3_556 2.12 223 1 C5 A BGC 3 ? ? 1_555 O4 A MAN 11 ? ? 3_545 2.12 224 1 O5 A GAL 5 ? ? 1_555 O5 A MAN 8 ? ? 3_556 2.12 225 1 O5 A GAL 1 ? ? 1_555 O5 A MAN 4 ? ? 3_545 2.12 226 1 C2 A GAL 1 ? ? 1_555 C4 A BGC 3 ? ? 3_545 2.12 227 1 C2 A GAL 5 ? ? 1_555 C4 A BGC 7 ? ? 3_556 2.12 228 1 O2 A GAL 1 ? ? 1_555 C2 A BGC 3 ? ? 3_545 2.13 229 1 O2 A GAL 5 ? ? 1_555 C2 A BGC 7 ? ? 3_556 2.13 230 1 C4 A MAN 4 ? ? 1_555 C9 A CEG 10 ? ? 3_556 2.13 231 1 C4 A MAN 8 ? ? 1_555 C9 A CEG 12 ? ? 3_546 2.13 232 1 C5 A MAN 8 ? ? 1_555 C9 A CEG 12 ? ? 3_546 2.14 233 1 C5 A MAN 4 ? ? 1_555 C9 A CEG 10 ? ? 3_556 2.14 234 1 C6 A MAN 4 ? ? 1_555 O6 A CEG 10 ? ? 3_556 2.14 235 1 C6 A MAN 8 ? ? 1_555 O6 A CEG 12 ? ? 3_546 2.14 236 1 C1 A BDP 2 ? ? 1_555 C3 A MAN 11 ? ? 3_545 2.16 237 1 C1 A BDP 6 ? ? 1_555 C3 A MAN 9 ? ? 3_556 2.16 238 1 C2 A GAL 5 ? ? 1_555 C1 A MAN 8 ? ? 3_556 2.16 239 1 C2 A GAL 1 ? ? 1_555 C1 A MAN 4 ? ? 3_545 2.16 240 1 O5 A GAL 1 ? ? 1_555 O6 A GAL 5 ? ? 3_545 2.18 241 1 O6 A GAL 1 ? ? 1_555 O5 A GAL 5 ? ? 3_545 2.18 242 1 C1 A BDP 2 ? ? 1_555 O2 A MAN 11 ? ? 3_545 2.19 243 1 C1 A BDP 6 ? ? 1_555 O2 A MAN 9 ? ? 3_556 2.19 244 1 O5 A BDP 2 ? ? 1_555 O3 A MAN 11 ? ? 3_545 2.19 245 1 O5 A BDP 6 ? ? 1_555 O3 A MAN 9 ? ? 3_556 2.19 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C1 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id GAL _pdbx_validate_chiral.auth_seq_id 5 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal BDP C1 C N R 1 BDP C2 C N R 2 BDP C3 C N S 3 BDP C4 C N S 4 BDP C5 C N S 5 BDP C6 C N N 6 BDP O2 O N N 7 BDP O3 O N N 8 BDP O4 O N N 9 BDP O5 O N N 10 BDP O6A O N N 11 BDP O1 O N N 12 BDP O6B O N N 13 BDP H1 H N N 14 BDP H2 H N N 15 BDP H3 H N N 16 BDP H4 H N N 17 BDP H5 H N N 18 BDP HO2 H N N 19 BDP HO3 H N N 20 BDP HO4 H N N 21 BDP HO1 H N N 22 BDP HO6B H N N 23 BGC C2 C N R 24 BGC C3 C N S 25 BGC C4 C N S 26 BGC C5 C N R 27 BGC C6 C N N 28 BGC C1 C N R 29 BGC O1 O N N 30 BGC O2 O N N 31 BGC O3 O N N 32 BGC O4 O N N 33 BGC O5 O N N 34 BGC O6 O N N 35 BGC H2 H N N 36 BGC H3 H N N 37 BGC H4 H N N 38 BGC H5 H N N 39 BGC H61 H N N 40 BGC H62 H N N 41 BGC H1 H N N 42 BGC HO1 H N N 43 BGC HO2 H N N 44 BGC HO3 H N N 45 BGC HO4 H N N 46 BGC HO6 H N N 47 CEG C1 C N R 48 CEG C2 C N R 49 CEG C3 C N R 50 CEG C4 C N S 51 CEG C5 C N R 52 CEG C6 C N N 53 CEG C7 C N S 54 CEG C8 C N N 55 CEG C9 C N N 56 CEG O1 O N N 57 CEG O2 O N N 58 CEG O3 O N N 59 CEG O4 O N N 60 CEG O5 O N N 61 CEG O6 O N N 62 CEG O8A O N N 63 CEG O8B O N N 64 CEG H1 H N N 65 CEG H2 H N N 66 CEG H3 H N N 67 CEG H4 H N N 68 CEG H5 H N N 69 CEG H61 H N N 70 CEG H62 H N N 71 CEG H9A H N N 72 CEG H9B H N N 73 CEG H9C H N N 74 CEG HO1 H N N 75 CEG HO2 H N N 76 CEG HO3 H N N 77 CEG HOB8 H N N 78 GAL C1 C N R 79 GAL C2 C N R 80 GAL C3 C N S 81 GAL C4 C N R 82 GAL C5 C N R 83 GAL C6 C N N 84 GAL O1 O N N 85 GAL O2 O N N 86 GAL O3 O N N 87 GAL O4 O N N 88 GAL O5 O N N 89 GAL O6 O N N 90 GAL H1 H N N 91 GAL H2 H N N 92 GAL H3 H N N 93 GAL H4 H N N 94 GAL H5 H N N 95 GAL H61 H N N 96 GAL H62 H N N 97 GAL HO1 H N N 98 GAL HO2 H N N 99 GAL HO3 H N N 100 GAL HO4 H N N 101 GAL HO6 H N N 102 MAN C1 C N S 103 MAN C2 C N S 104 MAN C3 C N S 105 MAN C4 C N S 106 MAN C5 C N R 107 MAN C6 C N N 108 MAN O1 O N N 109 MAN O2 O N N 110 MAN O3 O N N 111 MAN O4 O N N 112 MAN O5 O N N 113 MAN O6 O N N 114 MAN H1 H N N 115 MAN H2 H N N 116 MAN H3 H N N 117 MAN H4 H N N 118 MAN H5 H N N 119 MAN H61 H N N 120 MAN H62 H N N 121 MAN HO1 H N N 122 MAN HO2 H N N 123 MAN HO3 H N N 124 MAN HO4 H N N 125 MAN HO6 H N N 126 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BDP C1 C2 sing N N 1 BDP C1 O5 sing N N 2 BDP C1 O1 sing N N 3 BDP C1 H1 sing N N 4 BDP C2 C3 sing N N 5 BDP C2 O2 sing N N 6 BDP C2 H2 sing N N 7 BDP C3 C4 sing N N 8 BDP C3 O3 sing N N 9 BDP C3 H3 sing N N 10 BDP C4 C5 sing N N 11 BDP C4 O4 sing N N 12 BDP C4 H4 sing N N 13 BDP C5 C6 sing N N 14 BDP C5 O5 sing N N 15 BDP C5 H5 sing N N 16 BDP C6 O6A doub N N 17 BDP C6 O6B sing N N 18 BDP O2 HO2 sing N N 19 BDP O3 HO3 sing N N 20 BDP O4 HO4 sing N N 21 BDP O1 HO1 sing N N 22 BDP O6B HO6B sing N N 23 BGC C2 C3 sing N N 24 BGC C2 C1 sing N N 25 BGC C2 O2 sing N N 26 BGC C2 H2 sing N N 27 BGC C3 C4 sing N N 28 BGC C3 O3 sing N N 29 BGC C3 H3 sing N N 30 BGC C4 C5 sing N N 31 BGC C4 O4 sing N N 32 BGC C4 H4 sing N N 33 BGC C5 C6 sing N N 34 BGC C5 O5 sing N N 35 BGC C5 H5 sing N N 36 BGC C6 O6 sing N N 37 BGC C6 H61 sing N N 38 BGC C6 H62 sing N N 39 BGC C1 O1 sing N N 40 BGC C1 O5 sing N N 41 BGC C1 H1 sing N N 42 BGC O1 HO1 sing N N 43 BGC O2 HO2 sing N N 44 BGC O3 HO3 sing N N 45 BGC O4 HO4 sing N N 46 BGC O6 HO6 sing N N 47 CEG C1 C2 sing N N 48 CEG C1 O1 sing N N 49 CEG C1 O5 sing N N 50 CEG C1 H1 sing N N 51 CEG C2 C3 sing N N 52 CEG C2 O2 sing N N 53 CEG C2 H2 sing N N 54 CEG C3 C4 sing N N 55 CEG C3 O3 sing N N 56 CEG C3 H3 sing N N 57 CEG C4 C5 sing N N 58 CEG C4 O4 sing N N 59 CEG C4 H4 sing N N 60 CEG C5 C6 sing N N 61 CEG C5 O5 sing N N 62 CEG C5 H5 sing N N 63 CEG C6 O6 sing N N 64 CEG C6 H61 sing N N 65 CEG C6 H62 sing N N 66 CEG C7 C8 sing N N 67 CEG C7 C9 sing N N 68 CEG C7 O4 sing N N 69 CEG C7 O6 sing N N 70 CEG C8 O8A doub N N 71 CEG C8 O8B sing N N 72 CEG C9 H9A sing N N 73 CEG C9 H9B sing N N 74 CEG C9 H9C sing N N 75 CEG O1 HO1 sing N N 76 CEG O2 HO2 sing N N 77 CEG O3 HO3 sing N N 78 CEG O8B HOB8 sing N N 79 GAL C1 C2 sing N N 80 GAL C1 O1 sing N N 81 GAL C1 O5 sing N N 82 GAL C1 H1 sing N N 83 GAL C2 C3 sing N N 84 GAL C2 O2 sing N N 85 GAL C2 H2 sing N N 86 GAL C3 C4 sing N N 87 GAL C3 O3 sing N N 88 GAL C3 H3 sing N N 89 GAL C4 C5 sing N N 90 GAL C4 O4 sing N N 91 GAL C4 H4 sing N N 92 GAL C5 C6 sing N N 93 GAL C5 O5 sing N N 94 GAL C5 H5 sing N N 95 GAL C6 O6 sing N N 96 GAL C6 H61 sing N N 97 GAL C6 H62 sing N N 98 GAL O1 HO1 sing N N 99 GAL O2 HO2 sing N N 100 GAL O3 HO3 sing N N 101 GAL O4 HO4 sing N N 102 GAL O6 HO6 sing N N 103 MAN C1 C2 sing N N 104 MAN C1 O1 sing N N 105 MAN C1 O5 sing N N 106 MAN C1 H1 sing N N 107 MAN C2 C3 sing N N 108 MAN C2 O2 sing N N 109 MAN C2 H2 sing N N 110 MAN C3 C4 sing N N 111 MAN C3 O3 sing N N 112 MAN C3 H3 sing N N 113 MAN C4 C5 sing N N 114 MAN C4 O4 sing N N 115 MAN C4 H4 sing N N 116 MAN C5 C6 sing N N 117 MAN C5 O5 sing N N 118 MAN C5 H5 sing N N 119 MAN C6 O6 sing N N 120 MAN C6 H61 sing N N 121 MAN C6 H62 sing N N 122 MAN O1 HO1 sing N N 123 MAN O2 HO2 sing N N 124 MAN O3 HO3 sing N N 125 MAN O4 HO4 sing N N 126 MAN O6 HO6 sing N N 127 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 1 GAL 1 n 1 BDP 2 n 1 BGC 3 n 1 MAN 4 n 1 GAL 5 n 1 BDP 6 n 1 BGC 7 n 1 MAN 8 n 1 MAN 9 n 1 CEG 10 n 1 MAN 11 n 1 CEG 12 n # _atom_sites.entry_id 1CAP _atom_sites.fract_transf_matrix[1][1] .049261 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] .084890 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] .032852 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H O # loop_