HEADER    PLANT SEED PROTEIN                      14-APR-93   1CCM              
TITLE     DIRECT NOE REFINEMENT OF CRAMBIN FROM 2D NMR DATA USING A SLOW-COOLING
TITLE    2 ANNEALING PROTOCOL                                                   
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: CRAMBIN;                                                   
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: CRAMBE HISPANICA SUBSP. ABYSSINICA;             
SOURCE   3 ORGANISM_TAXID: 3721;                                                
SOURCE   4 STRAIN: SUBSP. ABYSSINICA                                            
KEYWDS    PLANT SEED PROTEIN                                                    
EXPDTA    SOLUTION NMR                                                          
NUMMDL    8                                                                     
AUTHOR    A.M.J.J.BONVIN,J.A.C.RULLMANN,R.M.J.N.LAMERICHS,R.BOELENS,R.KAPTEIN   
REVDAT   4   20-NOV-24 1CCM    1       REMARK                                   
REVDAT   3   29-NOV-17 1CCM    1       REMARK HELIX                             
REVDAT   2   24-FEB-09 1CCM    1       VERSN                                    
REVDAT   1   31-OCT-93 1CCM    0                                                
JRNL        AUTH   A.M.BONVIN,J.A.RULLMANN,R.M.LAMERICHS,R.BOELENS,R.KAPTEIN    
JRNL        TITL   "ENSEMBLE" ITERATIVE RELAXATION MATRIX APPROACH: A NEW NMR   
JRNL        TITL 2 REFINEMENT PROTOCOL APPLIED TO THE SOLUTION STRUCTURE OF     
JRNL        TITL 3 CRAMBIN.                                                     
JRNL        REF    PROTEINS                      V.  15   385 1993              
JRNL        REFN                   ISSN 0887-3585                               
JRNL        PMID   8460109                                                      
JRNL        DOI    10.1002/PROT.340150406                                       
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   A.M.J.J.BONVIN,J.A.C.RULLMANN,R.M.J.N.LAMERICHS,R.BOELENS,   
REMARK   1  AUTH 2 R.KAPTEIN                                                    
REMARK   1  TITL   "ENSEMBLE" ITERATIVE RELAXATION MATRIX APPROACH: A NEW NMR   
REMARK   1  TITL 2 REFINEMENT PROTOCOL APPLIED TO THE SOLUTION STRUCTURE OF     
REMARK   1  TITL 3 CRAMBIN                                                      
REMARK   1  REF    PROTEINS                      V.  15   385 1993              
REMARK   1  REFN                   ISSN 0887-3585                               
REMARK   1 REFERENCE 2                                                          
REMARK   1  AUTH   J.A.C.RULLMANN,A.M.J.J.BONVIN,R.BOELENS,R.KAPTEIN            
REMARK   1  TITL   STRUCTURE DETERMINATION BY NMR-APPLICATION TO CRAMBIN        
REMARK   1  EDIT   D.M.SOUMPASIS, T.M.JOVIN                                     
REMARK   1  REF    COMPUTATION OF BIOMOLECULAR              1 1992              
REMARK   1  REF  2 STRUCTURES; ACHIEVEMENTS                                     
REMARK   1  REF  3 PROBLEMS, AND PERSPECTIVES                                   
REMARK   1  PUBL   SPRINGER-VERLAG, BERLIN                                      
REMARK   1  REFN                                                                
REMARK   1 REFERENCE 3                                                          
REMARK   1  AUTH   R.M.J.M.LAMERICHS                                            
REMARK   1  TITL   2D NMR STUDIES OF BIOMOLECULES: PROTEIN STRUCTURE AND        
REMARK   1  TITL 2 PROTEIN-DNA INTERACTIONS                                     
REMARK   1  REF    THESIS                                     1989              
REMARK   1  REFN                                                                
REMARK   1 REFERENCE 4                                                          
REMARK   1  AUTH   R.M.J.N.LAMERICHS,L.J.BERLINER,R.BOELENS,A.DEMARCO,M.LLINAS, 
REMARK   1  AUTH 2 R.KAPTEIN                                                    
REMARK   1  TITL   SECONDARY STRUCTURE AND HYDROGEN BONDING OF CRAMBIN IN       
REMARK   1  TITL 2 SOLUTION                                                     
REMARK   1  REF    EUR.J.BIOCHEM.                V. 171   307 1988              
REMARK   1  REFN                   ISSN 0014-2956                               
REMARK   1 REFERENCE 5                                                          
REMARK   1  AUTH   J.A.W.H.VERMEULEN,R.M.J.M.LAMERICHS,L.J.BERLINER,A.DEMARCO,  
REMARK   1  AUTH 2 M.LLINAS,R.BOELENS,J.ALLEMAN,R.KAPTEIN                       
REMARK   1  TITL   1H NMR CHARACTERIZATION OF TWO CRAMBIN SPECIES               
REMARK   1  REF    FEBS LETT.                    V. 219   426 1987              
REMARK   1  REFN                   ISSN 0014-5793                               
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : GROMOS                                               
REMARK   3   AUTHORS     : VAN GUNSTEREN,BERENDSEN                              
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1CCM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.                                
REMARK 100 THE DEPOSITION ID IS D_1000172234.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : NULL                               
REMARK 210  PH                             : NULL                               
REMARK 210  IONIC STRENGTH                 : NULL                               
REMARK 210  PRESSURE                       : NULL                               
REMARK 210  SAMPLE CONTENTS                : NULL                               
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : NULL                               
REMARK 210  SPECTROMETER FIELD STRENGTH    : NULL                               
REMARK 210  SPECTROMETER MODEL             : NULL                               
REMARK 210  SPECTROMETER MANUFACTURER      : NULL                               
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NULL                               
REMARK 210   METHOD USED                   : NULL                               
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : NULL                               
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 8                                  
REMARK 210 CONFORMERS, SELECTION CRITERIA  : NULL                               
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL                
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500  1 THR A   1   CA  -  CB  -  CG2 ANGL. DEV. =   8.9 DEGREES          
REMARK 500  1 ILE A   7   CA  -  CB  -  CG1 ANGL. DEV. =  18.1 DEGREES          
REMARK 500  1 PHE A  13   CB  -  CG  -  CD2 ANGL. DEV. =  -5.0 DEGREES          
REMARK 500  1 ARG A  17   CB  -  CA  -  C   ANGL. DEV. =  20.3 DEGREES          
REMARK 500  1 TYR A  29   CB  -  CG  -  CD2 ANGL. DEV. =  -6.3 DEGREES          
REMARK 500  1 TYR A  44   CB  -  CG  -  CD1 ANGL. DEV. =  -5.4 DEGREES          
REMARK 500  2 THR A   1   CA  -  CB  -  CG2 ANGL. DEV. =   9.3 DEGREES          
REMARK 500  2 PHE A  13   CB  -  CG  -  CD2 ANGL. DEV. =  -5.8 DEGREES          
REMARK 500  2 ARG A  17   CB  -  CA  -  C   ANGL. DEV. =  17.5 DEGREES          
REMARK 500  2 ARG A  17   N   -  CA  -  CB  ANGL. DEV. = -11.0 DEGREES          
REMARK 500  2 ARG A  17   NE  -  CZ  -  NH1 ANGL. DEV. =   4.9 DEGREES          
REMARK 500  2 ARG A  17   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.9 DEGREES          
REMARK 500  2 TYR A  29   CB  -  CG  -  CD2 ANGL. DEV. =  -5.9 DEGREES          
REMARK 500  2 ILE A  33   CG1 -  CB  -  CG2 ANGL. DEV. = -13.8 DEGREES          
REMARK 500  2 TYR A  44   CB  -  CG  -  CD1 ANGL. DEV. =  -4.3 DEGREES          
REMARK 500  3 PHE A  13   CB  -  CG  -  CD2 ANGL. DEV. =  -5.2 DEGREES          
REMARK 500  3 TYR A  29   CB  -  CG  -  CD2 ANGL. DEV. =  -6.8 DEGREES          
REMARK 500  3 TYR A  44   CB  -  CG  -  CD1 ANGL. DEV. =  -5.7 DEGREES          
REMARK 500  4 PHE A  13   CB  -  CG  -  CD2 ANGL. DEV. =  -5.4 DEGREES          
REMARK 500  4 ARG A  17   NE  -  CZ  -  NH1 ANGL. DEV. =   4.0 DEGREES          
REMARK 500  4 TYR A  29   CB  -  CG  -  CD2 ANGL. DEV. =  -5.3 DEGREES          
REMARK 500  4 TYR A  44   CB  -  CG  -  CD1 ANGL. DEV. =  -5.6 DEGREES          
REMARK 500  5 PHE A  13   CB  -  CG  -  CD2 ANGL. DEV. =  -5.5 DEGREES          
REMARK 500  5 TYR A  29   CB  -  CG  -  CD1 ANGL. DEV. =  -3.8 DEGREES          
REMARK 500  5 TYR A  44   CB  -  CG  -  CD1 ANGL. DEV. =  -5.1 DEGREES          
REMARK 500  6 ARG A  17   NE  -  CZ  -  NH1 ANGL. DEV. =   3.1 DEGREES          
REMARK 500  6 TYR A  29   CB  -  CG  -  CD1 ANGL. DEV. =  -3.9 DEGREES          
REMARK 500  7 PHE A  13   CB  -  CG  -  CD2 ANGL. DEV. =  -5.9 DEGREES          
REMARK 500  7 TYR A  29   CB  -  CG  -  CD2 ANGL. DEV. =  -6.0 DEGREES          
REMARK 500  7 TYR A  44   CB  -  CG  -  CD1 ANGL. DEV. =  -5.9 DEGREES          
REMARK 500  8 PHE A  13   CB  -  CG  -  CD2 ANGL. DEV. =  -4.8 DEGREES          
REMARK 500  8 TYR A  29   CB  -  CG  -  CD2 ANGL. DEV. =  -5.2 DEGREES          
REMARK 500  8 TYR A  44   CB  -  CG  -  CD1 ANGL. DEV. =  -5.3 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 THR A  21      -71.71     -8.51                                   
REMARK 500  1 PRO A  36      -38.51    -38.71                                   
REMARK 500  2 SER A   6       41.34   -108.67                                   
REMARK 500  2 ILE A   7      -41.24     47.84                                   
REMARK 500  2 THR A  21      -68.39   -148.78                                   
REMARK 500  2 ALA A  38       -0.64     73.50                                   
REMARK 500  3 THR A  30       50.10   -143.50                                   
REMARK 500  3 ALA A  38      -16.49    111.41                                   
REMARK 500  3 ALA A  45       43.70   -103.75                                   
REMARK 500  4 THR A   2       60.09   -101.55                                   
REMARK 500  4 THR A  21      -71.30   -147.14                                   
REMARK 500  4 ALA A  45       78.43   -108.56                                   
REMARK 500  5 THR A   2       73.66   -110.85                                   
REMARK 500  5 THR A  21      -70.39    -61.14                                   
REMARK 500  5 ALA A  45       50.40    -95.21                                   
REMARK 500  6 THR A   2       60.19   -101.87                                   
REMARK 500  6 THR A  21      -67.52   -149.47                                   
REMARK 500  7 ARG A  17       40.71    -97.07                                   
REMARK 500  7 PRO A  19      -65.88      0.24                                   
REMARK 500  8 THR A   2       68.66   -102.51                                   
REMARK 500  8 THR A  21      -69.28   -154.55                                   
REMARK 500  8 THR A  30       49.12   -145.19                                   
REMARK 500  8 ALA A  38      -29.13     48.21                                   
REMARK 500  8 ALA A  45       35.75    -91.07                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 ARG A   17     LEU A   18          7       147.58                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500  1 ARG A  10         0.15    SIDE CHAIN                              
REMARK 500  1 TYR A  29         0.07    SIDE CHAIN                              
REMARK 500  2 ARG A  17         0.11    SIDE CHAIN                              
REMARK 500  3 TYR A  29         0.08    SIDE CHAIN                              
REMARK 500  4 TYR A  29         0.10    SIDE CHAIN                              
REMARK 500  6 TYR A  44         0.07    SIDE CHAIN                              
REMARK 500  7 TYR A  29         0.08    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY                                       
REMARK 500                                                                      
REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY                       
REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER                 
REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME;                     
REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;                            
REMARK 500 I=INSERTION CODE).                                                   
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        ANGLE                                           
REMARK 500  2 ARG A  17        -12.82                                           
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1CCN   RELATED DB: PDB                                   
DBREF  1CCM A    1    46  UNP    P01542   CRAM_CRAAB       1     46             
SEQRES   1 A   46  THR THR CYS CYS PRO SER ILE VAL ALA ARG SER ASN PHE          
SEQRES   2 A   46  ASN VAL CYS ARG LEU PRO GLY THR PRO GLU ALA LEU CYS          
SEQRES   3 A   46  ALA THR TYR THR GLY CYS ILE ILE ILE PRO GLY ALA THR          
SEQRES   4 A   46  CYS PRO GLY ASP TYR ALA ASN                                  
HELIX    1  H1 ILE A    7  LEU A   18  13/10 CONFORMATION RES 17,18       12    
HELIX    2  H2 GLU A   23  THR A   30  1                                   8    
SHEET    1  S1 2 THR A   1  CYS A   4  0                                        
SHEET    2  S1 2 CYS A  32  ILE A  35 -1                                        
SSBOND   1 CYS A    3    CYS A   40                          1555   1555  2.03  
SSBOND   2 CYS A    4    CYS A   32                          1555   1555  2.04  
SSBOND   3 CYS A   16    CYS A   26                          1555   1555  2.05  
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1