data_1CDP # _entry.id 1CDP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1CDP WWPDB D_1000172261 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1CDP _pdbx_database_status.recvd_initial_deposition_date 1990-01-24 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Swain, A.L.' 1 'Kretsinger, R.H.' 2 'Amma, E.L.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Restrained least squares refinement of native (calcium) and cadmium-substituted carp parvalbumin using X-ray crystallographic data at 1.6-A resolution. ; J.Biol.Chem. 264 16620 16628 1989 JBCHA3 US 0021-9258 0071 ? 2777802 ? 1 'The Coordination Polyhedron of Ca2+,Cd2+ in Parvalbumin' Inorg.Chim.Acta. 163 5 ? 1989 ICHAA3 SZ 0020-1693 0155 ? ? ? 2 'Refinement of the Structure of Carp Muscle Calcium-Binding Parvalbumin by Model Building and Difference Fourier Analysis' J.Mol.Biol. 91 201 ? 1975 JMOBAK UK 0022-2836 0070 ? ? ? 3 'Terbium Replacement of Calcium in Carp Muscle Calcium-Binding Parvalbumin,an X-Ray Crystallographic Study' J.Mol.Biol. 91 229 ? 1975 JMOBAK UK 0022-2836 0070 ? ? ? 4 'Troponin and Parvalbumin Calcium Binding Regions Predicted in Myosin Light Chain and T4 Lysozyme' Science 187 167 ? 1975 SCIEAS US 0036-8075 0038 ? ? ? 5 'Calcium Binding Proteins and Natural Membranes' 'Perspectives in Membrane Biology' ? 229 ? 1974 ? ? 0-12-243650-4 0980 'Academic Press,New York' ? ? 6 'The Coordination of Calcium Ions by Carp Muscle Calcium-Binding Proteins A,B,and C' Adv.Exp.Med.Biol. 48 211 ? 1974 AEMBAP US 0065-2598 0412 ? ? ? 7 'Carp Muscle Calcium-Binding Protein, I.Characterization of the Tryptic Peptides and the Complete Amino Acid Sequence of Component B' J.Biol.Chem. 248 3305 ? 1973 JBCHA3 US 0021-9258 0071 ? ? ? 8 'Carp Muscle Calcium-Binding Protein, II.Structure Determination and General Description' J.Biol.Chem. 248 3313 ? 1973 JBCHA3 US 0021-9258 0071 ? ? ? 9 'Carp Muscle Calcium-Binding Protein, III.Phase Refinement Using the Tangent Formula' J.Biol.Chem. 248 3327 ? 1973 JBCHA3 US 0021-9258 0071 ? ? ? 10 'Gene Duplication in Carp Muscle Calcium Binding Protein' 'Nature New Biol.' 240 83 ? 1972 NNBYA7 UK 0369-4887 0192 ? ? ? 11 'Gene Triplication Deduced from the Tertiary Structure of a Muscle Calcium Binding Protein' 'Nature New Biol.' 240 85 ? 1972 NNBYA7 UK 0369-4887 0192 ? ? ? 12 'Structure of a Calcium Binding Carp Myogen' Proc.Natl.Acad.Sci.USA 69 581 ? 1972 PNASA6 US 0027-8424 0040 ? ? ? 13 'The Structure of a Calcium-Binding Protein from Carp Muscle' 'Cold Spring Harbor Symp.Quant.Biol.' 36 217 ? 1972 CSHSAZ US 0091-7451 0421 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Swain, A.L.' 1 primary 'Kretsinger, R.H.' 2 primary 'Amma, E.L.' 3 1 'Swain, A.L.' 4 1 'Amma, E.L.' 5 2 'Moews, P.C.' 6 2 'Kretsinger, R.H.' 7 3 'Moews, P.C.' 8 3 'Kretsinger, R.H.' 9 4 'Tufty, R.M.' 10 4 'Kretsinger, R.H.' 11 5 'Kretsinger, R.H.' 12 6 'Coffee, C.J.' 13 6 'Bradshaw, R.A.' 14 6 'Kretsinger, R.H.' 15 7 'Coffee, C.J.' 16 7 'Bradshaw, R.A.' 17 8 'Kretsinger, R.H.' 18 8 'Nockolds, C.E.' 19 9 'Hendrickson, W.A.' 20 9 'Karle, J.' 21 10 'Mclachlan, A.D.' 22 11 'Kretsinger, R.H.' 23 12 'Nockolds, C.E.' 24 12 'Kretsinger, R.H.' 25 12 'Coffee, C.J.' 26 12 'Bradshaw, R.A.' 27 13 'Kretsinger, R.H.' 28 13 'Nockolds, C.E.' 29 13 'Coffee, C.J.' 30 13 'Bradshaw, R.A.' 31 # loop_ _citation_editor.citation_id _citation_editor.name _citation_editor.ordinal 5 'Estrada, S.' 1 5 'Gitler, C.' 2 # _cell.entry_id 1CDP _cell.length_a 28.440 _cell.length_b 60.460 _cell.length_c 54.120 _cell.angle_alpha 90.00 _cell.angle_beta 94.80 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CDP _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CADMIUM-SUBSTITUTED CALCIUM-BINDING PARVALBUMIN B' 11476.829 1 ? ? ? ? 2 non-polymer syn 'CADMIUM ION' 112.411 2 ? ? ? ? 3 water nat water 18.015 73 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(ACE)AFAGVLNDADIAAALEACKAADSFNHKAFFAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADAR ALTDGETKTFLKAGDSDGDGKIGVDEFTALVKA ; _entity_poly.pdbx_seq_one_letter_code_can ;XAFAGVLNDADIAAALEACKAADSFNHKAFFAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTD GETKTFLKAGDSDGDGKIGVDEFTALVKA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 ALA n 1 3 PHE n 1 4 ALA n 1 5 GLY n 1 6 VAL n 1 7 LEU n 1 8 ASN n 1 9 ASP n 1 10 ALA n 1 11 ASP n 1 12 ILE n 1 13 ALA n 1 14 ALA n 1 15 ALA n 1 16 LEU n 1 17 GLU n 1 18 ALA n 1 19 CYS n 1 20 LYS n 1 21 ALA n 1 22 ALA n 1 23 ASP n 1 24 SER n 1 25 PHE n 1 26 ASN n 1 27 HIS n 1 28 LYS n 1 29 ALA n 1 30 PHE n 1 31 PHE n 1 32 ALA n 1 33 LYS n 1 34 VAL n 1 35 GLY n 1 36 LEU n 1 37 THR n 1 38 SER n 1 39 LYS n 1 40 SER n 1 41 ALA n 1 42 ASP n 1 43 ASP n 1 44 VAL n 1 45 LYS n 1 46 LYS n 1 47 ALA n 1 48 PHE n 1 49 ALA n 1 50 ILE n 1 51 ILE n 1 52 ASP n 1 53 GLN n 1 54 ASP n 1 55 LYS n 1 56 SER n 1 57 GLY n 1 58 PHE n 1 59 ILE n 1 60 GLU n 1 61 GLU n 1 62 ASP n 1 63 GLU n 1 64 LEU n 1 65 LYS n 1 66 LEU n 1 67 PHE n 1 68 LEU n 1 69 GLN n 1 70 ASN n 1 71 PHE n 1 72 LYS n 1 73 ALA n 1 74 ASP n 1 75 ALA n 1 76 ARG n 1 77 ALA n 1 78 LEU n 1 79 THR n 1 80 ASP n 1 81 GLY n 1 82 GLU n 1 83 THR n 1 84 LYS n 1 85 THR n 1 86 PHE n 1 87 LEU n 1 88 LYS n 1 89 ALA n 1 90 GLY n 1 91 ASP n 1 92 SER n 1 93 ASP n 1 94 GLY n 1 95 ASP n 1 96 GLY n 1 97 LYS n 1 98 ILE n 1 99 GLY n 1 100 VAL n 1 101 ASP n 1 102 GLU n 1 103 PHE n 1 104 THR n 1 105 ALA n 1 106 LEU n 1 107 VAL n 1 108 LYS n 1 109 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'common carp' _entity_src_gen.gene_src_genus Cyprinus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Cyprinus carpio' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7962 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PRVB_CYPCA _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P02618 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;AFAGVLNDADIAAALEACKAADSFNHKAFFAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDG ETKTFLKAGDSDGDGKIGVDEFTALVKA ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1CDP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 109 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02618 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 108 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 108 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1CDP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_percent_sol 39.11 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1CDP _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.0 _refine.ls_d_res_high 1.6 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1640000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 810 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 73 _refine_hist.number_atoms_total 885 _refine_hist.d_res_high 1.6 _refine_hist.d_res_low 10.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.02 0.02 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.04 0.04 ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d 0.06 0.05 ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it 1.2 1.0 ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it 1.9 1.5 ? ? 'X-RAY DIFFRACTION' ? p_scbond_it 2.7 3.0 ? ? 'X-RAY DIFFRACTION' ? p_scangle_it 4.2 4.0 ? ? 'X-RAY DIFFRACTION' ? p_plane_restr 0.02 0.02 ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr 0.17 0.15 ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd 0.18 0.50 ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd 0.18 0.50 ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd 0.27 0.50 ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_tor 2.9 3.0 ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor 18.8 15.0 ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor 28.1 20.0 ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1CDP _struct.title ;RESTRAINED LEAST SQUARES REFINEMENT OF NATIVE (CALCIUM) AND CADMIUM-SUBSTITUTED CARP PARVALBUMIN USING X-RAY CRYSTALLOGRAPHIC DATA AT 1.6-ANGSTROMS RESOLUTION ; _struct.pdbx_descriptor 'CADMIUM-SUBSTITUTED CALCIUM-BINDING PARVALBUMIN B' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1CDP _struct_keywords.pdbx_keywords 'CALCIUM BINDING' _struct_keywords.text 'CALCIUM BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A ASP A 9 ? ALA A 18 ? ASP A 8 ALA A 17 1 ? 10 HELX_P HELX_P2 B HIS A 27 ? VAL A 34 ? HIS A 26 VAL A 33 1 ? 8 HELX_P HELX_P3 C ALA A 41 ? ILE A 51 ? ALA A 40 ILE A 50 1 ? 11 HELX_P HELX_P4 D GLU A 61 ? PHE A 71 ? GLU A 60 PHE A 70 1 ? 11 HELX_P HELX_P5 E ASP A 80 ? GLY A 90 ? ASP A 79 GLY A 89 1 ? 11 HELX_P HELX_P6 F VAL A 100 ? LYS A 108 ? VAL A 99 LYS A 107 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ACE 1 C ? ? ? 1_555 A ALA 2 N ? ? A ACE 0 A ALA 1 1_555 ? ? ? ? ? ? ? 1.320 ? metalc1 metalc ? ? B CD . CD ? ? ? 1_555 A ASP 93 OD1 ? ? A CD 109 A ASP 92 1_555 ? ? ? ? ? ? ? 2.395 ? metalc2 metalc ? ? B CD . CD ? ? ? 1_555 A ASP 95 OD1 ? ? A CD 109 A ASP 94 1_555 ? ? ? ? ? ? ? 2.166 ? metalc3 metalc ? ? B CD . CD ? ? ? 1_555 A GLU 102 OE2 ? ? A CD 109 A GLU 101 1_555 ? ? ? ? ? ? ? 2.656 ? metalc4 metalc ? ? B CD . CD ? ? ? 1_555 D HOH . O ? ? A CD 109 A HOH 116 1_555 ? ? ? ? ? ? ? 2.369 ? metalc5 metalc ? ? B CD . CD ? ? ? 1_555 A LYS 97 O ? ? A CD 109 A LYS 96 1_555 ? ? ? ? ? ? ? 2.302 ? metalc6 metalc ? ? B CD . CD ? ? ? 1_555 A GLU 102 OE1 ? ? A CD 109 A GLU 101 1_555 ? ? ? ? ? ? ? 2.261 ? metalc7 metalc ? ? B CD . CD ? ? ? 1_555 A ASP 91 OD2 ? ? A CD 109 A ASP 90 1_555 ? ? ? ? ? ? ? 2.262 ? metalc8 metalc ? ? C CD . CD ? ? ? 1_555 A GLU 63 OE2 ? ? A CD 110 A GLU 62 1_555 ? ? ? ? ? ? ? 2.357 ? metalc9 metalc ? ? C CD . CD ? ? ? 1_555 A ASP 54 OD1 ? ? A CD 110 A ASP 53 1_555 ? ? ? ? ? ? ? 2.356 ? metalc10 metalc ? ? C CD . CD ? ? ? 1_555 A PHE 58 O ? ? A CD 110 A PHE 57 1_555 ? ? ? ? ? ? ? 2.250 ? metalc11 metalc ? ? C CD . CD ? ? ? 1_555 A SER 56 OG ? ? A CD 110 A SER 55 1_555 ? ? ? ? ? ? ? 2.582 ? metalc12 metalc ? ? C CD . CD ? ? ? 1_555 A ASP 52 OD1 ? ? A CD 110 A ASP 51 1_555 ? ? ? ? ? ? ? 2.124 ? metalc13 metalc ? ? C CD . CD ? ? ? 1_555 A GLU 63 OE1 ? ? A CD 110 A GLU 62 1_555 ? ? ? ? ? ? ? 2.767 ? metalc14 metalc ? ? C CD . CD ? ? ? 1_555 A GLU 60 OE1 ? ? A CD 110 A GLU 59 1_555 ? ? ? ? ? ? ? 2.340 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id BS _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id BS _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id BS 1 PHE A 58 ? GLU A 60 ? PHE A 57 GLU A 59 BS 2 GLY A 96 ? ILE A 98 ? GLY A 95 ILE A 97 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details CD Unknown ? ? ? ? 12 ? EF Unknown ? ? ? ? 12 ? AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CD A 109' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CD A 110' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 CD 12 ASP A 52 ? ASP A 51 . ? 1_555 ? 2 CD 12 GLN A 53 ? GLN A 52 . ? 1_555 ? 3 CD 12 ASP A 54 ? ASP A 53 . ? 1_555 ? 4 CD 12 LYS A 55 ? LYS A 54 . ? 1_555 ? 5 CD 12 SER A 56 ? SER A 55 . ? 1_555 ? 6 CD 12 GLY A 57 ? GLY A 56 . ? 1_555 ? 7 CD 12 PHE A 58 ? PHE A 57 . ? 1_555 ? 8 CD 12 ILE A 59 ? ILE A 58 . ? 1_555 ? 9 CD 12 GLU A 60 ? GLU A 59 . ? 1_555 ? 10 CD 12 GLU A 61 ? GLU A 60 . ? 1_555 ? 11 CD 12 ASP A 62 ? ASP A 61 . ? 1_555 ? 12 CD 12 GLU A 63 ? GLU A 62 . ? 1_555 ? 13 EF 12 ASP A 91 ? ASP A 90 . ? 1_555 ? 14 EF 12 SER A 92 ? SER A 91 . ? 1_555 ? 15 EF 12 ASP A 93 ? ASP A 92 . ? 1_555 ? 16 EF 12 GLY A 94 ? GLY A 93 . ? 1_555 ? 17 EF 12 ASP A 95 ? ASP A 94 . ? 1_555 ? 18 EF 12 GLY A 96 ? GLY A 95 . ? 1_555 ? 19 EF 12 LYS A 97 ? LYS A 96 . ? 1_555 ? 20 EF 12 ILE A 98 ? ILE A 97 . ? 1_555 ? 21 EF 12 GLY A 99 ? GLY A 98 . ? 1_555 ? 22 EF 12 VAL A 100 ? VAL A 99 . ? 1_555 ? 23 EF 12 ASP A 101 ? ASP A 100 . ? 1_555 ? 24 EF 12 GLU A 102 ? GLU A 101 . ? 1_555 ? 25 AC1 6 ASP A 91 ? ASP A 90 . ? 1_555 ? 26 AC1 6 ASP A 93 ? ASP A 92 . ? 1_555 ? 27 AC1 6 ASP A 95 ? ASP A 94 . ? 1_555 ? 28 AC1 6 LYS A 97 ? LYS A 96 . ? 1_555 ? 29 AC1 6 GLU A 102 ? GLU A 101 . ? 1_555 ? 30 AC1 6 HOH D . ? HOH A 116 . ? 1_555 ? 31 AC2 6 ASP A 52 ? ASP A 51 . ? 1_555 ? 32 AC2 6 ASP A 54 ? ASP A 53 . ? 1_555 ? 33 AC2 6 SER A 56 ? SER A 55 . ? 1_555 ? 34 AC2 6 PHE A 58 ? PHE A 57 . ? 1_555 ? 35 AC2 6 GLU A 60 ? GLU A 59 . ? 1_555 ? 36 AC2 6 GLU A 63 ? GLU A 62 . ? 1_555 ? # _database_PDB_matrix.entry_id 1CDP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1CDP _atom_sites.fract_transf_matrix[1][1] 0.035162 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002803 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016540 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018542 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text 'HOH 116 IS THE SEVENTH LIGAND FOR CD 109.' # loop_ _atom_type.symbol C CD N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 ALA 2 1 1 ALA ALA A . n A 1 3 PHE 3 2 2 PHE PHE A . n A 1 4 ALA 4 3 3 ALA ALA A . n A 1 5 GLY 5 4 4 GLY GLY A . n A 1 6 VAL 6 5 5 VAL VAL A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 ASN 8 7 7 ASN ASN A . n A 1 9 ASP 9 8 8 ASP ASP A . n A 1 10 ALA 10 9 9 ALA ALA A . n A 1 11 ASP 11 10 10 ASP ASP A . n A 1 12 ILE 12 11 11 ILE ILE A . n A 1 13 ALA 13 12 12 ALA ALA A . n A 1 14 ALA 14 13 13 ALA ALA A . n A 1 15 ALA 15 14 14 ALA ALA A . n A 1 16 LEU 16 15 15 LEU LEU A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 ALA 18 17 17 ALA ALA A . n A 1 19 CYS 19 18 18 CYS CYS A . n A 1 20 LYS 20 19 19 LYS LYS A . n A 1 21 ALA 21 20 20 ALA ALA A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 ASP 23 22 22 ASP ASP A . n A 1 24 SER 24 23 23 SER SER A . n A 1 25 PHE 25 24 24 PHE PHE A . n A 1 26 ASN 26 25 25 ASN ASN A . n A 1 27 HIS 27 26 26 HIS HIS A . n A 1 28 LYS 28 27 27 LYS LYS A . n A 1 29 ALA 29 28 28 ALA ALA A . n A 1 30 PHE 30 29 29 PHE PHE A . n A 1 31 PHE 31 30 30 PHE PHE A . n A 1 32 ALA 32 31 31 ALA ALA A . n A 1 33 LYS 33 32 32 LYS LYS A . n A 1 34 VAL 34 33 33 VAL VAL A . n A 1 35 GLY 35 34 34 GLY GLY A . n A 1 36 LEU 36 35 35 LEU LEU A . n A 1 37 THR 37 36 36 THR THR A . n A 1 38 SER 38 37 37 SER SER A . n A 1 39 LYS 39 38 38 LYS LYS A . n A 1 40 SER 40 39 39 SER SER A . n A 1 41 ALA 41 40 40 ALA ALA A . n A 1 42 ASP 42 41 41 ASP ASP A . n A 1 43 ASP 43 42 42 ASP ASP A . n A 1 44 VAL 44 43 43 VAL VAL A . n A 1 45 LYS 45 44 44 LYS LYS A . n A 1 46 LYS 46 45 45 LYS LYS A . n A 1 47 ALA 47 46 46 ALA ALA A . n A 1 48 PHE 48 47 47 PHE PHE A . n A 1 49 ALA 49 48 48 ALA ALA A . n A 1 50 ILE 50 49 49 ILE ILE A . n A 1 51 ILE 51 50 50 ILE ILE A . n A 1 52 ASP 52 51 51 ASP ASP A . n A 1 53 GLN 53 52 52 GLN GLN A . n A 1 54 ASP 54 53 53 ASP ASP A . n A 1 55 LYS 55 54 54 LYS LYS A . n A 1 56 SER 56 55 55 SER SER A . n A 1 57 GLY 57 56 56 GLY GLY A . n A 1 58 PHE 58 57 57 PHE PHE A . n A 1 59 ILE 59 58 58 ILE ILE A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 GLU 61 60 60 GLU GLU A . n A 1 62 ASP 62 61 61 ASP ASP A . n A 1 63 GLU 63 62 62 GLU GLU A . n A 1 64 LEU 64 63 63 LEU LEU A . n A 1 65 LYS 65 64 64 LYS LYS A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 PHE 67 66 66 PHE PHE A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 GLN 69 68 68 GLN GLN A . n A 1 70 ASN 70 69 69 ASN ASN A . n A 1 71 PHE 71 70 70 PHE PHE A . n A 1 72 LYS 72 71 71 LYS LYS A . n A 1 73 ALA 73 72 72 ALA ALA A . n A 1 74 ASP 74 73 73 ASP ASP A . n A 1 75 ALA 75 74 74 ALA ALA A . n A 1 76 ARG 76 75 75 ARG ARG A . n A 1 77 ALA 77 76 76 ALA ALA A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 THR 79 78 78 THR THR A . n A 1 80 ASP 80 79 79 ASP ASP A . n A 1 81 GLY 81 80 80 GLY GLY A . n A 1 82 GLU 82 81 81 GLU GLU A . n A 1 83 THR 83 82 82 THR THR A . n A 1 84 LYS 84 83 83 LYS LYS A . n A 1 85 THR 85 84 84 THR THR A . n A 1 86 PHE 86 85 85 PHE PHE A . n A 1 87 LEU 87 86 86 LEU LEU A . n A 1 88 LYS 88 87 87 LYS LYS A . n A 1 89 ALA 89 88 88 ALA ALA A . n A 1 90 GLY 90 89 89 GLY GLY A . n A 1 91 ASP 91 90 90 ASP ASP A . n A 1 92 SER 92 91 91 SER SER A . n A 1 93 ASP 93 92 92 ASP ASP A . n A 1 94 GLY 94 93 93 GLY GLY A . n A 1 95 ASP 95 94 94 ASP ASP A . n A 1 96 GLY 96 95 95 GLY GLY A . n A 1 97 LYS 97 96 96 LYS LYS A . n A 1 98 ILE 98 97 97 ILE ILE A . n A 1 99 GLY 99 98 98 GLY GLY A . n A 1 100 VAL 100 99 99 VAL VAL A . n A 1 101 ASP 101 100 100 ASP ASP A . n A 1 102 GLU 102 101 101 GLU GLU A . n A 1 103 PHE 103 102 102 PHE PHE A . n A 1 104 THR 104 103 103 THR THR A . n A 1 105 ALA 105 104 104 ALA ALA A . n A 1 106 LEU 106 105 105 LEU LEU A . n A 1 107 VAL 107 106 106 VAL VAL A . n A 1 108 LYS 108 107 107 LYS LYS A . n A 1 109 ALA 109 108 108 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD 1 109 109 CD CD A . C 2 CD 1 110 110 CD CD A . D 3 HOH 1 111 111 HOH HOH A . D 3 HOH 2 112 112 HOH HOH A . D 3 HOH 3 113 113 HOH HOH A . D 3 HOH 4 114 114 HOH HOH A . D 3 HOH 5 115 115 HOH HOH A . D 3 HOH 6 116 116 HOH HOH A . D 3 HOH 7 117 117 HOH HOH A . D 3 HOH 8 118 118 HOH HOH A . D 3 HOH 9 119 119 HOH HOH A . D 3 HOH 10 120 120 HOH HOH A . D 3 HOH 11 121 121 HOH HOH A . D 3 HOH 12 122 122 HOH HOH A . D 3 HOH 13 123 123 HOH HOH A . D 3 HOH 14 124 124 HOH HOH A . D 3 HOH 15 125 125 HOH HOH A . D 3 HOH 16 126 126 HOH HOH A . D 3 HOH 17 128 128 HOH HOH A . D 3 HOH 18 129 129 HOH HOH A . D 3 HOH 19 130 130 HOH HOH A . D 3 HOH 20 131 131 HOH HOH A . D 3 HOH 21 132 132 HOH HOH A . D 3 HOH 22 133 133 HOH HOH A . D 3 HOH 23 134 134 HOH HOH A . D 3 HOH 24 135 135 HOH HOH A . D 3 HOH 25 136 136 HOH HOH A . D 3 HOH 26 137 137 HOH HOH A . D 3 HOH 27 138 138 HOH HOH A . D 3 HOH 28 139 139 HOH HOH A . D 3 HOH 29 140 140 HOH HOH A . D 3 HOH 30 141 141 HOH HOH A . D 3 HOH 31 142 142 HOH HOH A . D 3 HOH 32 143 143 HOH HOH A . D 3 HOH 33 144 144 HOH HOH A . D 3 HOH 34 145 145 HOH HOH A . D 3 HOH 35 146 146 HOH HOH A . D 3 HOH 36 147 147 HOH HOH A . D 3 HOH 37 148 148 HOH HOH A . D 3 HOH 38 149 149 HOH HOH A . D 3 HOH 39 150 150 HOH HOH A . D 3 HOH 40 151 151 HOH HOH A . D 3 HOH 41 152 152 HOH HOH A . D 3 HOH 42 153 153 HOH HOH A . D 3 HOH 43 154 154 HOH HOH A . D 3 HOH 44 155 155 HOH HOH A . D 3 HOH 45 156 156 HOH HOH A . D 3 HOH 46 157 157 HOH HOH A . D 3 HOH 47 158 158 HOH HOH A . D 3 HOH 48 159 159 HOH HOH A . D 3 HOH 49 160 160 HOH HOH A . D 3 HOH 50 161 161 HOH HOH A . D 3 HOH 51 162 162 HOH HOH A . D 3 HOH 52 163 163 HOH HOH A . D 3 HOH 53 164 164 HOH HOH A . D 3 HOH 54 165 165 HOH HOH A . D 3 HOH 55 166 166 HOH HOH A . D 3 HOH 56 167 167 HOH HOH A . D 3 HOH 57 168 168 HOH HOH A . D 3 HOH 58 169 169 HOH HOH A . D 3 HOH 59 170 170 HOH HOH A . D 3 HOH 60 171 171 HOH HOH A . D 3 HOH 61 172 172 HOH HOH A . D 3 HOH 62 173 173 HOH HOH A . D 3 HOH 63 174 174 HOH HOH A . D 3 HOH 64 175 175 HOH HOH A . D 3 HOH 65 176 176 HOH HOH A . D 3 HOH 66 177 177 HOH HOH A . D 3 HOH 67 178 178 HOH HOH A . D 3 HOH 68 179 179 HOH HOH A . D 3 HOH 69 180 180 HOH HOH A . D 3 HOH 70 181 181 HOH HOH A . D 3 HOH 71 182 182 HOH HOH A . D 3 HOH 72 183 183 HOH HOH A . D 3 HOH 73 184 184 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 28.4397929583 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 93 ? A ASP 92 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OD1 ? A ASP 95 ? A ASP 94 ? 1_555 80.4 ? 2 OD1 ? A ASP 93 ? A ASP 92 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OE2 ? A GLU 102 ? A GLU 101 ? 1_555 74.4 ? 3 OD1 ? A ASP 95 ? A ASP 94 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OE2 ? A GLU 102 ? A GLU 101 ? 1_555 154.8 ? 4 OD1 ? A ASP 93 ? A ASP 92 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 O ? D HOH . ? A HOH 116 ? 1_555 102.1 ? 5 OD1 ? A ASP 95 ? A ASP 94 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 O ? D HOH . ? A HOH 116 ? 1_555 79.4 ? 6 OE2 ? A GLU 102 ? A GLU 101 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 O ? D HOH . ? A HOH 116 ? 1_555 106.9 ? 7 OD1 ? A ASP 93 ? A ASP 92 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 O ? A LYS 97 ? A LYS 96 ? 1_555 155.4 ? 8 OD1 ? A ASP 95 ? A ASP 94 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 O ? A LYS 97 ? A LYS 96 ? 1_555 77.3 ? 9 OE2 ? A GLU 102 ? A GLU 101 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 O ? A LYS 97 ? A LYS 96 ? 1_555 127.1 ? 10 O ? D HOH . ? A HOH 116 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 O ? A LYS 97 ? A LYS 96 ? 1_555 83.9 ? 11 OD1 ? A ASP 93 ? A ASP 92 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OE1 ? A GLU 102 ? A GLU 101 ? 1_555 120.2 ? 12 OD1 ? A ASP 95 ? A ASP 94 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OE1 ? A GLU 102 ? A GLU 101 ? 1_555 152.9 ? 13 OE2 ? A GLU 102 ? A GLU 101 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OE1 ? A GLU 102 ? A GLU 101 ? 1_555 49.8 ? 14 O ? D HOH . ? A HOH 116 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OE1 ? A GLU 102 ? A GLU 101 ? 1_555 79.1 ? 15 O ? A LYS 97 ? A LYS 96 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OE1 ? A GLU 102 ? A GLU 101 ? 1_555 84.2 ? 16 OD1 ? A ASP 93 ? A ASP 92 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OD2 ? A ASP 91 ? A ASP 90 ? 1_555 77.7 ? 17 OD1 ? A ASP 95 ? A ASP 94 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OD2 ? A ASP 91 ? A ASP 90 ? 1_555 86.5 ? 18 OE2 ? A GLU 102 ? A GLU 101 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OD2 ? A ASP 91 ? A ASP 90 ? 1_555 86.9 ? 19 O ? D HOH . ? A HOH 116 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OD2 ? A ASP 91 ? A ASP 90 ? 1_555 165.7 ? 20 O ? A LYS 97 ? A LYS 96 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OD2 ? A ASP 91 ? A ASP 90 ? 1_555 90.7 ? 21 OE1 ? A GLU 102 ? A GLU 101 ? 1_555 CD ? B CD . ? A CD 109 ? 1_555 OD2 ? A ASP 91 ? A ASP 90 ? 1_555 113.6 ? 22 OE2 ? A GLU 63 ? A GLU 62 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OD1 ? A ASP 54 ? A ASP 53 ? 1_555 125.1 ? 23 OE2 ? A GLU 63 ? A GLU 62 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 O ? A PHE 58 ? A PHE 57 ? 1_555 85.7 ? 24 OD1 ? A ASP 54 ? A ASP 53 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 O ? A PHE 58 ? A PHE 57 ? 1_555 147.2 ? 25 OE2 ? A GLU 63 ? A GLU 62 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OG ? A SER 56 ? A SER 55 ? 1_555 156.6 ? 26 OD1 ? A ASP 54 ? A ASP 53 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OG ? A SER 56 ? A SER 55 ? 1_555 77.5 ? 27 O ? A PHE 58 ? A PHE 57 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OG ? A SER 56 ? A SER 55 ? 1_555 74.0 ? 28 OE2 ? A GLU 63 ? A GLU 62 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OD1 ? A ASP 52 ? A ASP 51 ? 1_555 99.6 ? 29 OD1 ? A ASP 54 ? A ASP 53 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OD1 ? A ASP 52 ? A ASP 51 ? 1_555 81.1 ? 30 O ? A PHE 58 ? A PHE 57 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OD1 ? A ASP 52 ? A ASP 51 ? 1_555 82.8 ? 31 OG ? A SER 56 ? A SER 55 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OD1 ? A ASP 52 ? A ASP 51 ? 1_555 89.4 ? 32 OE2 ? A GLU 63 ? A GLU 62 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OE1 ? A GLU 63 ? A GLU 62 ? 1_555 50.2 ? 33 OD1 ? A ASP 54 ? A ASP 53 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OE1 ? A GLU 63 ? A GLU 62 ? 1_555 75.2 ? 34 O ? A PHE 58 ? A PHE 57 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OE1 ? A GLU 63 ? A GLU 62 ? 1_555 135.7 ? 35 OG ? A SER 56 ? A SER 55 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OE1 ? A GLU 63 ? A GLU 62 ? 1_555 149.8 ? 36 OD1 ? A ASP 52 ? A ASP 51 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OE1 ? A GLU 63 ? A GLU 62 ? 1_555 98.9 ? 37 OE2 ? A GLU 63 ? A GLU 62 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OE1 ? A GLU 60 ? A GLU 59 ? 1_555 82.7 ? 38 OD1 ? A ASP 54 ? A ASP 53 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OE1 ? A GLU 60 ? A GLU 59 ? 1_555 106.2 ? 39 O ? A PHE 58 ? A PHE 57 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OE1 ? A GLU 60 ? A GLU 59 ? 1_555 86.9 ? 40 OG ? A SER 56 ? A SER 55 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OE1 ? A GLU 60 ? A GLU 59 ? 1_555 84.7 ? 41 OD1 ? A ASP 52 ? A ASP 51 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OE1 ? A GLU 60 ? A GLU 59 ? 1_555 169.2 ? 42 OE1 ? A GLU 63 ? A GLU 62 ? 1_555 CD ? C CD . ? A CD 110 ? 1_555 OE1 ? A GLU 60 ? A GLU 59 ? 1_555 90.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1990-10-15 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' struct_conf 3 4 'Structure model' struct_conf_type # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_database_status.process_site' # _software.name PROLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 145 ? ? 1_555 O A HOH 145 ? ? 2_655 1.48 2 1 O A HOH 162 ? ? 1_555 O A HOH 162 ? ? 2_655 1.70 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A ASN 7 ? ? CB A ASN 7 ? ? CG A ASN 7 ? ? 128.41 113.40 15.01 2.20 N 2 1 CB A ASP 8 ? ? CG A ASP 8 ? ? OD1 A ASP 8 ? ? 124.21 118.30 5.91 0.90 N 3 1 CB A ASP 51 ? ? CG A ASP 51 ? ? OD2 A ASP 51 ? ? 109.42 118.30 -8.88 0.90 N 4 1 CB A ASP 73 ? ? CG A ASP 73 ? ? OD1 A ASP 73 ? ? 125.63 118.30 7.33 0.90 N 5 1 CB A ASP 94 ? ? CG A ASP 94 ? ? OD2 A ASP 94 ? ? 112.77 118.30 -5.53 0.90 N 6 1 OE1 A GLU 101 ? ? CD A GLU 101 ? ? OE2 A GLU 101 ? ? 115.98 123.30 -7.32 1.20 N 7 1 CG A GLU 101 ? ? CD A GLU 101 ? ? OE1 A GLU 101 ? ? 130.90 118.30 12.60 2.00 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 3 ? ? -58.38 94.61 2 1 LEU A 6 ? ? -172.91 149.51 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CADMIUM ION' CD 3 water HOH #