HEADER COMPLEMENT REGULATORY PROTEIN 01-JUN-94 1CDR TITLE STRUCTURE OF A SOLUBLE, GLYCOSYLATED FORM OF THE HUMAN COMPLEMENT TITLE 2 REGULATORY PROTEIN CD59 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CD59; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS COMPLEMENT REGULATORY PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR C.M.FLETCHER,R.A.HARRISON,P.J.LACHMANN,D.NEUHAUS REVDAT 6 06-NOV-24 1CDR 1 HETSYN REVDAT 5 29-JUL-20 1CDR 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE ATOM REVDAT 4 13-JUL-11 1CDR 1 VERSN REVDAT 3 25-AUG-09 1CDR 1 SOURCE REVDAT 2 24-FEB-09 1CDR 1 VERSN REVDAT 1 30-SEP-94 1CDR 0 JRNL AUTH C.M.FLETCHER,R.A.HARRISON,P.J.LACHMANN,D.NEUHAUS JRNL TITL STRUCTURE OF A SOLUBLE, GLYCOSYLATED FORM OF THE HUMAN JRNL TITL 2 COMPLEMENT REGULATORY PROTEIN CD59. JRNL REF STRUCTURE V. 2 185 1994 JRNL REFN ISSN 0969-2126 JRNL PMID 7520819 JRNL DOI 10.1016/S0969-2126(00)00020-4 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.M.FLETCHER,R.A.HARRISON,P.J.LACHMANN,D.NEUHAUS REMARK 1 TITL SEQUENCE-SPECIFIC 1H-NMR ASSIGNMENTS AND FOLDING TOPOLOGY OF REMARK 1 TITL 2 HUMAN CD59 REMARK 1 REF PROTEIN SCI. V. 2 2015 1993 REMARK 1 REFN ISSN 0961-8368 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.DAVIES,P.J.LACHMANN REMARK 1 TITL MEMBRANE DEFENCE AGAINST COMPLEMENT LYSIS: THE STRUCTURE AND REMARK 1 TITL 2 BIOLOGICAL PROPERTIES OF CD59 REMARK 1 REF IMMUNOL.RES. V. 12 258 1993 REMARK 1 REFN ISSN 0257-277X REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1CDR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172263. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 12 42.84 -171.84 REMARK 500 1 LYS A 14 26.30 -140.52 REMARK 500 1 SER A 20 -177.33 -51.34 REMARK 500 1 ALA A 31 45.08 -85.93 REMARK 500 1 LEU A 33 -45.89 165.69 REMARK 500 1 PHE A 47 57.12 -90.89 REMARK 500 1 ASN A 48 -32.75 178.87 REMARK 500 1 GLU A 56 -157.66 -123.57 REMARK 500 1 ASN A 57 -75.40 -161.73 REMARK 500 1 GLU A 58 102.76 -59.65 REMARK 500 1 ASP A 67 97.95 -45.44 REMARK 500 1 LEU A 68 70.19 79.43 REMARK 500 1 PHE A 71 -179.82 -51.43 REMARK 500 1 GLU A 73 51.80 -157.12 REMARK 500 1 GLN A 74 26.15 -160.42 REMARK 500 1 LEU A 75 21.23 -147.00 REMARK 500 2 CYS A 6 92.34 172.25 REMARK 500 2 ASP A 12 34.40 -166.01 REMARK 500 2 VAL A 17 137.20 177.67 REMARK 500 2 CYS A 19 -75.01 -44.99 REMARK 500 2 SER A 20 157.15 64.01 REMARK 500 2 SER A 21 52.11 79.78 REMARK 500 2 ASP A 22 81.57 63.06 REMARK 500 2 ALA A 31 47.36 -106.98 REMARK 500 2 LEU A 33 -38.36 -171.79 REMARK 500 2 ASN A 48 -33.32 -178.09 REMARK 500 2 ASN A 57 -58.86 -140.61 REMARK 500 2 LEU A 59 126.80 -176.55 REMARK 500 2 LEU A 68 64.25 69.11 REMARK 500 2 ASN A 72 63.69 65.96 REMARK 500 2 GLU A 73 43.32 179.39 REMARK 500 2 GLN A 74 16.19 -149.30 REMARK 500 2 LEU A 75 21.27 -154.50 REMARK 500 3 ASP A 12 48.71 179.00 REMARK 500 3 SER A 20 -156.71 -105.89 REMARK 500 3 ASP A 24 -39.46 -157.07 REMARK 500 3 CYS A 45 73.92 -100.01 REMARK 500 3 ASN A 48 -35.82 178.56 REMARK 500 3 LEU A 68 63.55 67.74 REMARK 500 3 GLU A 73 34.51 -179.76 REMARK 500 3 GLN A 74 -74.51 -117.11 REMARK 500 3 GLU A 76 107.45 -44.21 REMARK 500 4 ASP A 12 35.62 -173.81 REMARK 500 4 ALA A 16 83.97 40.89 REMARK 500 4 ASN A 48 -34.07 178.81 REMARK 500 4 ASN A 57 -68.16 -121.82 REMARK 500 4 GLU A 58 90.20 -58.95 REMARK 500 4 LYS A 65 37.85 -146.54 REMARK 500 4 LEU A 68 69.44 72.79 REMARK 500 4 GLU A 73 38.82 177.11 REMARK 500 REMARK 500 THIS ENTRY HAS 155 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 53 0.30 SIDE CHAIN REMARK 500 1 ARG A 55 0.28 SIDE CHAIN REMARK 500 2 ARG A 53 0.24 SIDE CHAIN REMARK 500 2 ARG A 55 0.15 SIDE CHAIN REMARK 500 3 ARG A 53 0.23 SIDE CHAIN REMARK 500 3 ARG A 55 0.31 SIDE CHAIN REMARK 500 4 ARG A 53 0.21 SIDE CHAIN REMARK 500 4 ARG A 55 0.21 SIDE CHAIN REMARK 500 5 ARG A 53 0.22 SIDE CHAIN REMARK 500 5 ARG A 55 0.32 SIDE CHAIN REMARK 500 6 ARG A 53 0.29 SIDE CHAIN REMARK 500 6 ARG A 55 0.30 SIDE CHAIN REMARK 500 7 ARG A 53 0.27 SIDE CHAIN REMARK 500 7 ARG A 55 0.28 SIDE CHAIN REMARK 500 8 ARG A 53 0.12 SIDE CHAIN REMARK 500 8 ARG A 55 0.31 SIDE CHAIN REMARK 500 9 ARG A 53 0.31 SIDE CHAIN REMARK 500 9 ARG A 55 0.31 SIDE CHAIN REMARK 500 10 ARG A 53 0.17 SIDE CHAIN REMARK 500 10 ARG A 55 0.28 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1CDR A 1 77 UNP P13987 CD59_HUMAN 26 102 SEQRES 1 A 77 LEU GLN CYS TYR ASN CYS PRO ASN PRO THR ALA ASP CYS SEQRES 2 A 77 LYS THR ALA VAL ASN CYS SER SER ASP PHE ASP ALA CYS SEQRES 3 A 77 LEU ILE THR LYS ALA GLY LEU GLN VAL TYR ASN LYS CYS SEQRES 4 A 77 TRP LYS PHE GLU HIS CYS ASN PHE ASN ASP VAL THR THR SEQRES 5 A 77 ARG LEU ARG GLU ASN GLU LEU THR TYR TYR CYS CYS LYS SEQRES 6 A 77 LYS ASP LEU CYS ASN PHE ASN GLU GLN LEU GLU ASN MODRES 1CDR ASN A 18 ASN GLYCOSYLATION SITE HET NAG B 1 26 HET NAG B 2 28 HET FUC B 3 21 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 2 FUC C6 H12 O5 HELIX 1 H1 PHE A 47 GLU A 56 1IRREGULAR H-BONDS AT C-T END 10 SHEET 1 S1 2 LEU A 1 CYS A 6 0 SHEET 2 S1 2 THR A 15 CYS A 19 -1 O VAL A 17 N CYS A 3 SHEET 1 S2 3 GLN A 34 TRP A 40 0 SHEET 2 S2 3 ALA A 25 ALA A 31 -1 N ALA A 25 O TRP A 40 SHEET 3 S2 3 LEU A 59 LYS A 65 -1 N CYS A 64 O CYS A 26 SSBOND 1 CYS A 3 CYS A 26 1555 1555 2.02 SSBOND 2 CYS A 6 CYS A 13 1555 1555 2.02 SSBOND 3 CYS A 19 CYS A 39 1555 1555 2.02 SSBOND 4 CYS A 45 CYS A 63 1555 1555 2.02 SSBOND 5 CYS A 64 CYS A 69 1555 1555 2.02 LINK ND2 ASN A 18 C1 NAG B 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.39 LINK O6 NAG B 1 C1 FUC B 3 1555 1555 1.40 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 ENDMDL MODEL 2 ENDMDL MODEL 3 ENDMDL MODEL 4 ENDMDL MODEL 5 ENDMDL MODEL 6 ENDMDL MODEL 7 ENDMDL MODEL 8 ENDMDL MODEL 9 ENDMDL MODEL 10 ENDMDL CONECT 44 348 CONECT 89 177 CONECT 177 89 CONECT 251 1196 CONECT 262 558 CONECT 348 44 CONECT 558 262 CONECT 666 966 CONECT 966 666 CONECT 976 1061 CONECT 1061 976 CONECT 1196 251 1197 1207 1210 CONECT 1197 1196 1198 1204 1211 CONECT 1198 1197 1199 1205 1212 CONECT 1199 1198 1200 1206 1213 CONECT 1200 1199 1201 1207 1214 CONECT 1201 1200 1208 1215 1216 CONECT 1202 1203 1204 1209 CONECT 1203 1202 1217 1218 1219 CONECT 1204 1197 1202 1220 CONECT 1205 1198 1221 CONECT 1206 1199 1222 CONECT 1207 1196 1200 CONECT 1208 1201 1250 CONECT 1209 1202 CONECT 1210 1196 CONECT 1211 1197 CONECT 1212 1198 CONECT 1213 1199 CONECT 1214 1200 CONECT 1215 1201 CONECT 1216 1201 CONECT 1217 1203 CONECT 1218 1203 CONECT 1219 1203 CONECT 1220 1204 CONECT 1221 1205 CONECT 1222 1206 1223 1233 1236 CONECT 1223 1222 1224 1230 1237 CONECT 1224 1223 1225 1231 1238 CONECT 1225 1224 1226 1232 1239 CONECT 1226 1225 1227 1233 1240 CONECT 1227 1226 1234 1241 1242 CONECT 1228 1229 1230 1235 CONECT 1229 1228 1243 1244 1245 CONECT 1230 1223 1228 1246 CONECT 1231 1224 1247 CONECT 1232 1225 1248 CONECT 1233 1222 1226 CONECT 1234 1227 1249 CONECT 1235 1228 CONECT 1236 1222 CONECT 1237 1223 CONECT 1238 1224 CONECT 1239 1225 CONECT 1240 1226 CONECT 1241 1227 CONECT 1242 1227 CONECT 1243 1229 CONECT 1244 1229 CONECT 1245 1229 CONECT 1246 1230 CONECT 1247 1231 CONECT 1248 1232 CONECT 1249 1234 CONECT 1250 1208 1251 1259 1260 CONECT 1251 1250 1252 1256 1261 CONECT 1252 1251 1253 1257 1262 CONECT 1253 1252 1254 1258 1263 CONECT 1254 1253 1255 1259 1264 CONECT 1255 1254 1265 1266 1267 CONECT 1256 1251 1268 CONECT 1257 1252 1269 CONECT 1258 1253 1270 CONECT 1259 1250 1254 CONECT 1260 1250 CONECT 1261 1251 CONECT 1262 1252 CONECT 1263 1253 CONECT 1264 1254 CONECT 1265 1255 CONECT 1266 1255 CONECT 1267 1255 CONECT 1268 1256 CONECT 1269 1257 CONECT 1270 1258 MASTER 180 0 3 1 5 0 0 6 660 1 86 6 END