data_1CG5 # _entry.id 1CG5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1CG5 RCSB RCSB000741 WWPDB D_1000000741 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1CG5 _pdbx_database_status.recvd_initial_deposition_date 1999-03-26 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chong, K.T.' 1 'Morimoto, H.' 2 # _citation.id primary _citation.title 'Structures of the deoxy and CO forms of haemoglobin from Dasyatis akajei, a cartilaginous fish.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 55 _citation.page_first 1291 _citation.page_last 1300 _citation.year 1999 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10393295 _citation.pdbx_database_id_DOI 10.1107/S0907444999005934 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Chong, K.T.' 1 primary 'Miyazaki, G.' 2 primary 'Morimoto, H.' 3 primary 'Oda, Y.' 4 primary 'Park, S.Y.' 5 # _cell.entry_id 1CG5 _cell.length_a 77.760 _cell.length_b 77.760 _cell.length_c 99.320 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CG5 _symmetry.space_group_name_H-M 'P 31 1 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 151 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'PROTEIN (HEMOGLOBIN)' 15861.097 1 ? ? ? ? 2 polymer nat 'PROTEIN (HEMOGLOBIN)' 16315.638 1 ? ? ? ? 3 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 2 ? ? ? ? 4 water nat water 18.015 151 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;VLSSQNKKAIEELGNLIKANAEAWGADALARLFELHPQTKTYFSKFSGFEACNEQVKKHGKRVMNALADATHHLDNLHLH LEDLARKHGENLLVDPHNFHLFADCIVVTLAVNLQAFTPVTHCAVDKFLELVAYELSSCYR ; ;VLSSQNKKAIEELGNLIKANAEAWGADALARLFELHPQTKTYFSKFSGFEACNEQVKKHGKRVMNALADATHHLDNLHLH LEDLARKHGENLLVDPHNFHLFADCIVVTLAVNLQAFTPVTHCAVDKFLELVAYELSSCYR ; A ? 2 'polypeptide(L)' no no ;VKLSEDQEHYIKGVWKDVDHKQITAKALERVFVVYPWTTRLFSKLQGLFSANDIGVQQHADKVQRALGEAIDDLKKVEIN FQNLSGKHQEIGVDTQNFKLLGQTFMVELALHYKKTFRPKEHAAAYKFFRLVAEALSSNYH ; ;VKLSEDQEHYIKGVWKDVDHKQITAKALERVFVVYPWTTRLFSKLQGLFSANDIGVQQHADKVQRALGEAIDDLKKVEIN FQNLSGKHQEIGVDTQNFKLLGQTFMVELALHYKKTFRPKEHAAAYKFFRLVAEALSSNYH ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 LEU n 1 3 SER n 1 4 SER n 1 5 GLN n 1 6 ASN n 1 7 LYS n 1 8 LYS n 1 9 ALA n 1 10 ILE n 1 11 GLU n 1 12 GLU n 1 13 LEU n 1 14 GLY n 1 15 ASN n 1 16 LEU n 1 17 ILE n 1 18 LYS n 1 19 ALA n 1 20 ASN n 1 21 ALA n 1 22 GLU n 1 23 ALA n 1 24 TRP n 1 25 GLY n 1 26 ALA n 1 27 ASP n 1 28 ALA n 1 29 LEU n 1 30 ALA n 1 31 ARG n 1 32 LEU n 1 33 PHE n 1 34 GLU n 1 35 LEU n 1 36 HIS n 1 37 PRO n 1 38 GLN n 1 39 THR n 1 40 LYS n 1 41 THR n 1 42 TYR n 1 43 PHE n 1 44 SER n 1 45 LYS n 1 46 PHE n 1 47 SER n 1 48 GLY n 1 49 PHE n 1 50 GLU n 1 51 ALA n 1 52 CYS n 1 53 ASN n 1 54 GLU n 1 55 GLN n 1 56 VAL n 1 57 LYS n 1 58 LYS n 1 59 HIS n 1 60 GLY n 1 61 LYS n 1 62 ARG n 1 63 VAL n 1 64 MET n 1 65 ASN n 1 66 ALA n 1 67 LEU n 1 68 ALA n 1 69 ASP n 1 70 ALA n 1 71 THR n 1 72 HIS n 1 73 HIS n 1 74 LEU n 1 75 ASP n 1 76 ASN n 1 77 LEU n 1 78 HIS n 1 79 LEU n 1 80 HIS n 1 81 LEU n 1 82 GLU n 1 83 ASP n 1 84 LEU n 1 85 ALA n 1 86 ARG n 1 87 LYS n 1 88 HIS n 1 89 GLY n 1 90 GLU n 1 91 ASN n 1 92 LEU n 1 93 LEU n 1 94 VAL n 1 95 ASP n 1 96 PRO n 1 97 HIS n 1 98 ASN n 1 99 PHE n 1 100 HIS n 1 101 LEU n 1 102 PHE n 1 103 ALA n 1 104 ASP n 1 105 CYS n 1 106 ILE n 1 107 VAL n 1 108 VAL n 1 109 THR n 1 110 LEU n 1 111 ALA n 1 112 VAL n 1 113 ASN n 1 114 LEU n 1 115 GLN n 1 116 ALA n 1 117 PHE n 1 118 THR n 1 119 PRO n 1 120 VAL n 1 121 THR n 1 122 HIS n 1 123 CYS n 1 124 ALA n 1 125 VAL n 1 126 ASP n 1 127 LYS n 1 128 PHE n 1 129 LEU n 1 130 GLU n 1 131 LEU n 1 132 VAL n 1 133 ALA n 1 134 TYR n 1 135 GLU n 1 136 LEU n 1 137 SER n 1 138 SER n 1 139 CYS n 1 140 TYR n 1 141 ARG n 2 1 VAL n 2 2 LYS n 2 3 LEU n 2 4 SER n 2 5 GLU n 2 6 ASP n 2 7 GLN n 2 8 GLU n 2 9 HIS n 2 10 TYR n 2 11 ILE n 2 12 LYS n 2 13 GLY n 2 14 VAL n 2 15 TRP n 2 16 LYS n 2 17 ASP n 2 18 VAL n 2 19 ASP n 2 20 HIS n 2 21 LYS n 2 22 GLN n 2 23 ILE n 2 24 THR n 2 25 ALA n 2 26 LYS n 2 27 ALA n 2 28 LEU n 2 29 GLU n 2 30 ARG n 2 31 VAL n 2 32 PHE n 2 33 VAL n 2 34 VAL n 2 35 TYR n 2 36 PRO n 2 37 TRP n 2 38 THR n 2 39 THR n 2 40 ARG n 2 41 LEU n 2 42 PHE n 2 43 SER n 2 44 LYS n 2 45 LEU n 2 46 GLN n 2 47 GLY n 2 48 LEU n 2 49 PHE n 2 50 SER n 2 51 ALA n 2 52 ASN n 2 53 ASP n 2 54 ILE n 2 55 GLY n 2 56 VAL n 2 57 GLN n 2 58 GLN n 2 59 HIS n 2 60 ALA n 2 61 ASP n 2 62 LYS n 2 63 VAL n 2 64 GLN n 2 65 ARG n 2 66 ALA n 2 67 LEU n 2 68 GLY n 2 69 GLU n 2 70 ALA n 2 71 ILE n 2 72 ASP n 2 73 ASP n 2 74 LEU n 2 75 LYS n 2 76 LYS n 2 77 VAL n 2 78 GLU n 2 79 ILE n 2 80 ASN n 2 81 PHE n 2 82 GLN n 2 83 ASN n 2 84 LEU n 2 85 SER n 2 86 GLY n 2 87 LYS n 2 88 HIS n 2 89 GLN n 2 90 GLU n 2 91 ILE n 2 92 GLY n 2 93 VAL n 2 94 ASP n 2 95 THR n 2 96 GLN n 2 97 ASN n 2 98 PHE n 2 99 LYS n 2 100 LEU n 2 101 LEU n 2 102 GLY n 2 103 GLN n 2 104 THR n 2 105 PHE n 2 106 MET n 2 107 VAL n 2 108 GLU n 2 109 LEU n 2 110 ALA n 2 111 LEU n 2 112 HIS n 2 113 TYR n 2 114 LYS n 2 115 LYS n 2 116 THR n 2 117 PHE n 2 118 ARG n 2 119 PRO n 2 120 LYS n 2 121 GLU n 2 122 HIS n 2 123 ALA n 2 124 ALA n 2 125 ALA n 2 126 TYR n 2 127 LYS n 2 128 PHE n 2 129 PHE n 2 130 ARG n 2 131 LEU n 2 132 VAL n 2 133 ALA n 2 134 GLU n 2 135 ALA n 2 136 LEU n 2 137 SER n 2 138 SER n 2 139 ASN n 2 140 TYR n 2 141 HIS n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? 'red stingray' 'Dasyatis akajei' 31902 Dasyatis ? ? ? ? ? ? ? ? ? ? ? ? ERYTHROCYTE ? ? ? 2 1 sample ? ? 'red stingray' 'Dasyatis akajei' 31902 Dasyatis ? ? ? ? ? ? ? ? ? ? ? ? ERYTHROCYTE ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP HBA_DASAK 1 P56691 ? ? ? 2 UNP HBB_DASAK 2 P56692 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1CG5 A 1 ? 141 ? P56691 2 ? 142 ? 1 141 2 2 1CG5 B 1 ? 141 ? P56692 2 ? 142 ? 1 141 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1CG5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_percent_sol 54.33 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'pH 6.5' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-18B' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-18B _diffrn_source.pdbx_wavelength 1.00 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1CG5 _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100 _reflns.d_resolution_high 1.6 _reflns.number_obs 42219 _reflns.number_all ? _reflns.percent_possible_obs 92.7 _reflns.pdbx_Rmerge_I_obs 0.0680000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 16.8 _reflns.pdbx_redundancy 4.9 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.6 _reflns_shell.d_res_low 1.66 _reflns_shell.percent_possible_all 78.1 _reflns_shell.Rmerge_I_obs 0.2630000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.0 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1CG5 _refine.ls_number_reflns_obs 41888 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 10000000.00 _refine.pdbx_data_cutoff_low_absF 0.001 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 1.6 _refine.ls_percent_reflns_obs 92.9 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1910000 _refine.ls_R_factor_R_free 0.2320000 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2138 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 16.7 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 2HHB _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1CG5 _refine_analyze.Luzzati_coordinate_error_obs 0.17 _refine_analyze.Luzzati_sigma_a_obs 0.21 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.19 _refine_analyze.Luzzati_sigma_a_free 0.23 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2272 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 86 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 2509 _refine_hist.d_res_high 1.6 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 19.3 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.19 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.25 1.5 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 1.84 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 3.06 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 4.73 2.50 ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARAM19X.PRO TOPH19X.PRO 'X-RAY DIFFRACTION' 2 PARAM19X.HEME TOPH19X.HEME 'X-RAY DIFFRACTION' 3 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' # _struct.entry_id 1CG5 _struct.title 'DEOXY FORM HEMOGLOBIN FROM DASYATIS AKAJEI' _struct.pdbx_descriptor HEMOGLOBIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1CG5 _struct_keywords.pdbx_keywords 'OXYGEN TRANSPORT' _struct_keywords.text 'OXYGEN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 4 ? LEU A 35 ? SER A 4 LEU A 35 1 ? 32 HELX_P HELX_P2 2 PRO A 37 ? TYR A 42 ? PRO A 37 TYR A 42 5 ? 6 HELX_P HELX_P3 3 GLU A 54 ? HIS A 72 ? GLU A 54 HIS A 72 1 ? 19 HELX_P HELX_P4 4 LEU A 77 ? HIS A 80 ? LEU A 77 HIS A 80 1 ? 4 HELX_P HELX_P5 5 GLU A 82 ? GLU A 90 ? GLU A 82 GLU A 90 1 ? 9 HELX_P HELX_P6 6 PRO A 96 ? ASN A 113 ? PRO A 96 ASN A 113 5 ? 18 HELX_P HELX_P7 7 PRO A 119 ? SER A 137 ? PRO A 119 SER A 137 1 ? 19 HELX_P HELX_P8 8 GLU B 5 ? ASP B 17 ? GLU B 5 ASP B 17 1 ? 13 HELX_P HELX_P9 9 HIS B 20 ? VAL B 34 ? HIS B 20 VAL B 34 1 ? 15 HELX_P HELX_P10 10 PRO B 36 ? THR B 39 ? PRO B 36 THR B 39 5 ? 4 HELX_P HELX_P11 11 SER B 43 ? LEU B 45 ? SER B 43 LEU B 45 5 ? 3 HELX_P HELX_P12 12 ILE B 54 ? ASP B 73 ? ILE B 54 ASP B 73 1 ? 20 HELX_P HELX_P13 13 VAL B 77 ? ASN B 80 ? VAL B 77 ASN B 80 1 ? 4 HELX_P HELX_P14 14 GLN B 82 ? ILE B 91 ? GLN B 82 ILE B 91 1 ? 10 HELX_P HELX_P15 15 THR B 95 ? THR B 116 ? THR B 95 THR B 116 5 ? 22 HELX_P HELX_P16 16 PRO B 119 ? SER B 137 ? PRO B 119 SER B 137 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A HIS 88 NE2 ? ? ? 1_555 C HEM . FE ? ? A HIS 88 A HEM 142 1_555 ? ? ? ? ? ? ? 2.182 ? metalc2 metalc ? ? B HIS 88 NE2 ? ? ? 1_555 D HEM . FE ? ? B HIS 88 B HEM 142 1_555 ? ? ? ? ? ? ? 2.254 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE HEM A 142' AC2 Software ? ? ? ? 11 'BINDING SITE FOR RESIDUE HEM B 142' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 TYR A 42 ? TYR A 42 . ? 1_555 ? 2 AC1 9 PHE A 43 ? PHE A 43 . ? 1_555 ? 3 AC1 9 HIS A 59 ? HIS A 59 . ? 1_555 ? 4 AC1 9 ARG A 62 ? ARG A 62 . ? 1_555 ? 5 AC1 9 LYS A 87 ? LYS A 87 . ? 1_555 ? 6 AC1 9 HIS A 88 ? HIS A 88 . ? 1_555 ? 7 AC1 9 LEU A 92 ? LEU A 92 . ? 1_555 ? 8 AC1 9 VAL A 94 ? VAL A 94 . ? 1_555 ? 9 AC1 9 HOH E . ? HOH A 177 . ? 1_555 ? 10 AC2 11 THR B 38 ? THR B 38 . ? 1_555 ? 11 AC2 11 PHE B 42 ? PHE B 42 . ? 1_555 ? 12 AC2 11 LYS B 44 ? LYS B 44 . ? 1_555 ? 13 AC2 11 HIS B 59 ? HIS B 59 . ? 1_555 ? 14 AC2 11 LYS B 62 ? LYS B 62 . ? 1_555 ? 15 AC2 11 ALA B 66 ? ALA B 66 . ? 1_555 ? 16 AC2 11 HIS B 88 ? HIS B 88 . ? 1_555 ? 17 AC2 11 VAL B 93 ? VAL B 93 . ? 1_555 ? 18 AC2 11 ASN B 97 ? ASN B 97 . ? 1_555 ? 19 AC2 11 LEU B 136 ? LEU B 136 . ? 1_555 ? 20 AC2 11 HOH F . ? HOH B 157 . ? 1_555 ? # _database_PDB_matrix.entry_id 1CG5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1CG5 _atom_sites.fract_transf_matrix[1][1] 0.012860 _atom_sites.fract_transf_matrix[1][2] 0.007425 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014849 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010068 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 1 VAL VAL A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 TRP 24 24 24 TRP TRP A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 HIS 36 36 36 HIS HIS A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 CYS 52 52 52 CYS CYS A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 HIS 59 59 59 HIS HIS A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 MET 64 64 64 MET MET A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 HIS 73 73 73 HIS HIS A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 HIS 80 80 80 HIS HIS A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 HIS 97 97 97 HIS HIS A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 HIS 100 100 100 HIS HIS A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 CYS 105 105 105 CYS CYS A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 PHE 117 117 117 PHE PHE A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 HIS 122 122 122 HIS HIS A . n A 1 123 CYS 123 123 123 CYS CYS A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 TYR 134 134 134 TYR TYR A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 SER 137 137 137 SER SER A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 CYS 139 139 139 CYS CYS A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 ARG 141 141 141 ARG ARG A . n B 2 1 VAL 1 1 1 VAL VAL B . n B 2 2 LYS 2 2 2 LYS LYS B . n B 2 3 LEU 3 3 3 LEU LEU B . n B 2 4 SER 4 4 4 SER SER B . n B 2 5 GLU 5 5 5 GLU GLU B . n B 2 6 ASP 6 6 6 ASP ASP B . n B 2 7 GLN 7 7 7 GLN GLN B . n B 2 8 GLU 8 8 8 GLU GLU B . n B 2 9 HIS 9 9 9 HIS HIS B . n B 2 10 TYR 10 10 10 TYR TYR B . n B 2 11 ILE 11 11 11 ILE ILE B . n B 2 12 LYS 12 12 12 LYS LYS B . n B 2 13 GLY 13 13 13 GLY GLY B . n B 2 14 VAL 14 14 14 VAL VAL B . n B 2 15 TRP 15 15 15 TRP TRP B . n B 2 16 LYS 16 16 16 LYS LYS B . n B 2 17 ASP 17 17 17 ASP ASP B . n B 2 18 VAL 18 18 18 VAL VAL B . n B 2 19 ASP 19 19 19 ASP ASP B . n B 2 20 HIS 20 20 20 HIS HIS B . n B 2 21 LYS 21 21 21 LYS LYS B . n B 2 22 GLN 22 22 22 GLN GLN B . n B 2 23 ILE 23 23 23 ILE ILE B . n B 2 24 THR 24 24 24 THR THR B . n B 2 25 ALA 25 25 25 ALA ALA B . n B 2 26 LYS 26 26 26 LYS LYS B . n B 2 27 ALA 27 27 27 ALA ALA B . n B 2 28 LEU 28 28 28 LEU LEU B . n B 2 29 GLU 29 29 29 GLU GLU B . n B 2 30 ARG 30 30 30 ARG ARG B . n B 2 31 VAL 31 31 31 VAL VAL B . n B 2 32 PHE 32 32 32 PHE PHE B . n B 2 33 VAL 33 33 33 VAL VAL B . n B 2 34 VAL 34 34 34 VAL VAL B . n B 2 35 TYR 35 35 35 TYR TYR B . n B 2 36 PRO 36 36 36 PRO PRO B . n B 2 37 TRP 37 37 37 TRP TRP B . n B 2 38 THR 38 38 38 THR THR B . n B 2 39 THR 39 39 39 THR THR B . n B 2 40 ARG 40 40 40 ARG ARG B . n B 2 41 LEU 41 41 41 LEU LEU B . n B 2 42 PHE 42 42 42 PHE PHE B . n B 2 43 SER 43 43 43 SER SER B . n B 2 44 LYS 44 44 44 LYS LYS B . n B 2 45 LEU 45 45 45 LEU LEU B . n B 2 46 GLN 46 46 46 GLN GLN B . n B 2 47 GLY 47 47 47 GLY GLY B . n B 2 48 LEU 48 48 48 LEU LEU B . n B 2 49 PHE 49 49 49 PHE PHE B . n B 2 50 SER 50 50 50 SER SER B . n B 2 51 ALA 51 51 51 ALA ALA B . n B 2 52 ASN 52 52 52 ASN ASN B . n B 2 53 ASP 53 53 53 ASP ASP B . n B 2 54 ILE 54 54 54 ILE ILE B . n B 2 55 GLY 55 55 55 GLY GLY B . n B 2 56 VAL 56 56 56 VAL VAL B . n B 2 57 GLN 57 57 57 GLN GLN B . n B 2 58 GLN 58 58 58 GLN GLN B . n B 2 59 HIS 59 59 59 HIS HIS B . n B 2 60 ALA 60 60 60 ALA ALA B . n B 2 61 ASP 61 61 61 ASP ASP B . n B 2 62 LYS 62 62 62 LYS LYS B . n B 2 63 VAL 63 63 63 VAL VAL B . n B 2 64 GLN 64 64 64 GLN GLN B . n B 2 65 ARG 65 65 65 ARG ARG B . n B 2 66 ALA 66 66 66 ALA ALA B . n B 2 67 LEU 67 67 67 LEU LEU B . n B 2 68 GLY 68 68 68 GLY GLY B . n B 2 69 GLU 69 69 69 GLU GLU B . n B 2 70 ALA 70 70 70 ALA ALA B . n B 2 71 ILE 71 71 71 ILE ILE B . n B 2 72 ASP 72 72 72 ASP ASP B . n B 2 73 ASP 73 73 73 ASP ASP B . n B 2 74 LEU 74 74 74 LEU LEU B . n B 2 75 LYS 75 75 75 LYS LYS B . n B 2 76 LYS 76 76 76 LYS LYS B . n B 2 77 VAL 77 77 77 VAL VAL B . n B 2 78 GLU 78 78 78 GLU GLU B . n B 2 79 ILE 79 79 79 ILE ILE B . n B 2 80 ASN 80 80 80 ASN ASN B . n B 2 81 PHE 81 81 81 PHE PHE B . n B 2 82 GLN 82 82 82 GLN GLN B . n B 2 83 ASN 83 83 83 ASN ASN B . n B 2 84 LEU 84 84 84 LEU LEU B . n B 2 85 SER 85 85 85 SER SER B . n B 2 86 GLY 86 86 86 GLY GLY B . n B 2 87 LYS 87 87 87 LYS LYS B . n B 2 88 HIS 88 88 88 HIS HIS B . n B 2 89 GLN 89 89 89 GLN GLN B . n B 2 90 GLU 90 90 90 GLU GLU B . n B 2 91 ILE 91 91 91 ILE ILE B . n B 2 92 GLY 92 92 92 GLY GLY B . n B 2 93 VAL 93 93 93 VAL VAL B . n B 2 94 ASP 94 94 94 ASP ASP B . n B 2 95 THR 95 95 95 THR THR B . n B 2 96 GLN 96 96 96 GLN GLN B . n B 2 97 ASN 97 97 97 ASN ASN B . n B 2 98 PHE 98 98 98 PHE PHE B . n B 2 99 LYS 99 99 99 LYS LYS B . n B 2 100 LEU 100 100 100 LEU LEU B . n B 2 101 LEU 101 101 101 LEU LEU B . n B 2 102 GLY 102 102 102 GLY GLY B . n B 2 103 GLN 103 103 103 GLN GLN B . n B 2 104 THR 104 104 104 THR THR B . n B 2 105 PHE 105 105 105 PHE PHE B . n B 2 106 MET 106 106 106 MET MET B . n B 2 107 VAL 107 107 107 VAL VAL B . n B 2 108 GLU 108 108 108 GLU GLU B . n B 2 109 LEU 109 109 109 LEU LEU B . n B 2 110 ALA 110 110 110 ALA ALA B . n B 2 111 LEU 111 111 111 LEU LEU B . n B 2 112 HIS 112 112 112 HIS HIS B . n B 2 113 TYR 113 113 113 TYR TYR B . n B 2 114 LYS 114 114 114 LYS LYS B . n B 2 115 LYS 115 115 115 LYS LYS B . n B 2 116 THR 116 116 116 THR THR B . n B 2 117 PHE 117 117 117 PHE PHE B . n B 2 118 ARG 118 118 118 ARG ARG B . n B 2 119 PRO 119 119 119 PRO PRO B . n B 2 120 LYS 120 120 120 LYS LYS B . n B 2 121 GLU 121 121 121 GLU GLU B . n B 2 122 HIS 122 122 122 HIS HIS B . n B 2 123 ALA 123 123 123 ALA ALA B . n B 2 124 ALA 124 124 124 ALA ALA B . n B 2 125 ALA 125 125 125 ALA ALA B . n B 2 126 TYR 126 126 126 TYR TYR B . n B 2 127 LYS 127 127 127 LYS LYS B . n B 2 128 PHE 128 128 128 PHE PHE B . n B 2 129 PHE 129 129 129 PHE PHE B . n B 2 130 ARG 130 130 130 ARG ARG B . n B 2 131 LEU 131 131 131 LEU LEU B . n B 2 132 VAL 132 132 132 VAL VAL B . n B 2 133 ALA 133 133 133 ALA ALA B . n B 2 134 GLU 134 134 134 GLU GLU B . n B 2 135 ALA 135 135 135 ALA ALA B . n B 2 136 LEU 136 136 136 LEU LEU B . n B 2 137 SER 137 137 137 SER SER B . n B 2 138 SER 138 138 138 SER SER B . n B 2 139 ASN 139 139 139 ASN ASN B . n B 2 140 TYR 140 140 140 TYR TYR B . n B 2 141 HIS 141 141 141 HIS HIS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HEM 1 142 142 HEM HEM A . D 3 HEM 1 142 142 HEM HEM B . E 4 HOH 1 143 1 HOH HOH A . E 4 HOH 2 144 2 HOH HOH A . E 4 HOH 3 145 3 HOH HOH A . E 4 HOH 4 146 6 HOH HOH A . E 4 HOH 5 147 7 HOH HOH A . E 4 HOH 6 148 8 HOH HOH A . E 4 HOH 7 149 10 HOH HOH A . E 4 HOH 8 150 12 HOH HOH A . E 4 HOH 9 151 13 HOH HOH A . E 4 HOH 10 152 14 HOH HOH A . E 4 HOH 11 153 17 HOH HOH A . E 4 HOH 12 154 18 HOH HOH A . E 4 HOH 13 155 20 HOH HOH A . E 4 HOH 14 156 21 HOH HOH A . E 4 HOH 15 157 25 HOH HOH A . E 4 HOH 16 158 26 HOH HOH A . E 4 HOH 17 159 27 HOH HOH A . E 4 HOH 18 160 29 HOH HOH A . E 4 HOH 19 161 31 HOH HOH A . E 4 HOH 20 162 35 HOH HOH A . E 4 HOH 21 163 36 HOH HOH A . E 4 HOH 22 164 37 HOH HOH A . E 4 HOH 23 165 38 HOH HOH A . E 4 HOH 24 166 39 HOH HOH A . E 4 HOH 25 167 40 HOH HOH A . E 4 HOH 26 168 42 HOH HOH A . E 4 HOH 27 169 43 HOH HOH A . E 4 HOH 28 170 44 HOH HOH A . E 4 HOH 29 171 47 HOH HOH A . E 4 HOH 30 172 48 HOH HOH A . E 4 HOH 31 173 50 HOH HOH A . E 4 HOH 32 174 51 HOH HOH A . E 4 HOH 33 175 52 HOH HOH A . E 4 HOH 34 176 55 HOH HOH A . E 4 HOH 35 177 56 HOH HOH A . E 4 HOH 36 178 58 HOH HOH A . E 4 HOH 37 179 61 HOH HOH A . E 4 HOH 38 180 62 HOH HOH A . E 4 HOH 39 181 63 HOH HOH A . E 4 HOH 40 182 65 HOH HOH A . E 4 HOH 41 183 67 HOH HOH A . E 4 HOH 42 184 68 HOH HOH A . E 4 HOH 43 185 69 HOH HOH A . E 4 HOH 44 186 70 HOH HOH A . E 4 HOH 45 187 74 HOH HOH A . E 4 HOH 46 188 75 HOH HOH A . E 4 HOH 47 189 76 HOH HOH A . E 4 HOH 48 190 77 HOH HOH A . E 4 HOH 49 191 78 HOH HOH A . E 4 HOH 50 192 79 HOH HOH A . E 4 HOH 51 193 81 HOH HOH A . E 4 HOH 52 194 83 HOH HOH A . E 4 HOH 53 195 84 HOH HOH A . E 4 HOH 54 196 86 HOH HOH A . E 4 HOH 55 197 88 HOH HOH A . E 4 HOH 56 198 90 HOH HOH A . E 4 HOH 57 199 92 HOH HOH A . E 4 HOH 58 200 94 HOH HOH A . E 4 HOH 59 201 96 HOH HOH A . E 4 HOH 60 202 101 HOH HOH A . E 4 HOH 61 203 102 HOH HOH A . E 4 HOH 62 204 106 HOH HOH A . E 4 HOH 63 205 118 HOH HOH A . E 4 HOH 64 206 121 HOH HOH A . E 4 HOH 65 207 122 HOH HOH A . E 4 HOH 66 208 123 HOH HOH A . E 4 HOH 67 209 124 HOH HOH A . E 4 HOH 68 210 125 HOH HOH A . E 4 HOH 69 211 126 HOH HOH A . E 4 HOH 70 212 127 HOH HOH A . E 4 HOH 71 213 128 HOH HOH A . E 4 HOH 72 214 129 HOH HOH A . E 4 HOH 73 215 130 HOH HOH A . E 4 HOH 74 216 131 HOH HOH A . E 4 HOH 75 217 132 HOH HOH A . E 4 HOH 76 218 133 HOH HOH A . E 4 HOH 77 219 134 HOH HOH A . E 4 HOH 78 220 136 HOH HOH A . E 4 HOH 79 221 139 HOH HOH A . E 4 HOH 80 222 140 HOH HOH A . E 4 HOH 81 223 141 HOH HOH A . E 4 HOH 82 224 142 HOH HOH A . E 4 HOH 83 225 143 HOH HOH A . E 4 HOH 84 226 144 HOH HOH A . E 4 HOH 85 227 145 HOH HOH A . E 4 HOH 86 228 146 HOH HOH A . E 4 HOH 87 229 147 HOH HOH A . E 4 HOH 88 230 148 HOH HOH A . E 4 HOH 89 231 149 HOH HOH A . F 4 HOH 1 143 4 HOH HOH B . F 4 HOH 2 144 5 HOH HOH B . F 4 HOH 3 145 9 HOH HOH B . F 4 HOH 4 146 11 HOH HOH B . F 4 HOH 5 147 15 HOH HOH B . F 4 HOH 6 148 16 HOH HOH B . F 4 HOH 7 149 19 HOH HOH B . F 4 HOH 8 150 22 HOH HOH B . F 4 HOH 9 151 23 HOH HOH B . F 4 HOH 10 152 24 HOH HOH B . F 4 HOH 11 153 28 HOH HOH B . F 4 HOH 12 154 30 HOH HOH B . F 4 HOH 13 155 32 HOH HOH B . F 4 HOH 14 156 33 HOH HOH B . F 4 HOH 15 157 34 HOH HOH B . F 4 HOH 16 158 41 HOH HOH B . F 4 HOH 17 159 45 HOH HOH B . F 4 HOH 18 160 46 HOH HOH B . F 4 HOH 19 161 49 HOH HOH B . F 4 HOH 20 162 53 HOH HOH B . F 4 HOH 21 163 54 HOH HOH B . F 4 HOH 22 164 57 HOH HOH B . F 4 HOH 23 165 59 HOH HOH B . F 4 HOH 24 166 60 HOH HOH B . F 4 HOH 25 167 64 HOH HOH B . F 4 HOH 26 168 66 HOH HOH B . F 4 HOH 27 169 71 HOH HOH B . F 4 HOH 28 170 72 HOH HOH B . F 4 HOH 29 171 73 HOH HOH B . F 4 HOH 30 172 80 HOH HOH B . F 4 HOH 31 173 82 HOH HOH B . F 4 HOH 32 174 85 HOH HOH B . F 4 HOH 33 175 87 HOH HOH B . F 4 HOH 34 176 89 HOH HOH B . F 4 HOH 35 177 91 HOH HOH B . F 4 HOH 36 178 93 HOH HOH B . F 4 HOH 37 179 95 HOH HOH B . F 4 HOH 38 180 97 HOH HOH B . F 4 HOH 39 181 98 HOH HOH B . F 4 HOH 40 182 99 HOH HOH B . F 4 HOH 41 183 100 HOH HOH B . F 4 HOH 42 184 103 HOH HOH B . F 4 HOH 43 185 104 HOH HOH B . F 4 HOH 44 186 105 HOH HOH B . F 4 HOH 45 187 107 HOH HOH B . F 4 HOH 46 188 108 HOH HOH B . F 4 HOH 47 189 109 HOH HOH B . F 4 HOH 48 190 110 HOH HOH B . F 4 HOH 49 191 111 HOH HOH B . F 4 HOH 50 192 112 HOH HOH B . F 4 HOH 51 193 113 HOH HOH B . F 4 HOH 52 194 114 HOH HOH B . F 4 HOH 53 195 115 HOH HOH B . F 4 HOH 54 196 116 HOH HOH B . F 4 HOH 55 197 117 HOH HOH B . F 4 HOH 56 198 119 HOH HOH B . F 4 HOH 57 199 120 HOH HOH B . F 4 HOH 58 200 135 HOH HOH B . F 4 HOH 59 201 137 HOH HOH B . F 4 HOH 60 202 138 HOH HOH B . F 4 HOH 61 203 150 HOH HOH B . F 4 HOH 62 204 151 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 -x+y,y,-z+1/3 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 33.1066666667 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 88 ? A HIS 88 ? 1_555 FE ? C HEM . ? A HEM 142 ? 1_555 NA ? C HEM . ? A HEM 142 ? 1_555 96.0 ? 2 NE2 ? A HIS 88 ? A HIS 88 ? 1_555 FE ? C HEM . ? A HEM 142 ? 1_555 NB ? C HEM . ? A HEM 142 ? 1_555 95.5 ? 3 NA ? C HEM . ? A HEM 142 ? 1_555 FE ? C HEM . ? A HEM 142 ? 1_555 NB ? C HEM . ? A HEM 142 ? 1_555 89.1 ? 4 NE2 ? A HIS 88 ? A HIS 88 ? 1_555 FE ? C HEM . ? A HEM 142 ? 1_555 NC ? C HEM . ? A HEM 142 ? 1_555 102.8 ? 5 NA ? C HEM . ? A HEM 142 ? 1_555 FE ? C HEM . ? A HEM 142 ? 1_555 NC ? C HEM . ? A HEM 142 ? 1_555 161.1 ? 6 NB ? C HEM . ? A HEM 142 ? 1_555 FE ? C HEM . ? A HEM 142 ? 1_555 NC ? C HEM . ? A HEM 142 ? 1_555 88.1 ? 7 NE2 ? A HIS 88 ? A HIS 88 ? 1_555 FE ? C HEM . ? A HEM 142 ? 1_555 ND ? C HEM . ? A HEM 142 ? 1_555 102.9 ? 8 NA ? C HEM . ? A HEM 142 ? 1_555 FE ? C HEM . ? A HEM 142 ? 1_555 ND ? C HEM . ? A HEM 142 ? 1_555 88.3 ? 9 NB ? C HEM . ? A HEM 142 ? 1_555 FE ? C HEM . ? A HEM 142 ? 1_555 ND ? C HEM . ? A HEM 142 ? 1_555 161.6 ? 10 NC ? C HEM . ? A HEM 142 ? 1_555 FE ? C HEM . ? A HEM 142 ? 1_555 ND ? C HEM . ? A HEM 142 ? 1_555 88.5 ? 11 NE2 ? B HIS 88 ? B HIS 88 ? 1_555 FE ? D HEM . ? B HEM 142 ? 1_555 NA ? D HEM . ? B HEM 142 ? 1_555 92.2 ? 12 NE2 ? B HIS 88 ? B HIS 88 ? 1_555 FE ? D HEM . ? B HEM 142 ? 1_555 NB ? D HEM . ? B HEM 142 ? 1_555 96.0 ? 13 NA ? D HEM . ? B HEM 142 ? 1_555 FE ? D HEM . ? B HEM 142 ? 1_555 NB ? D HEM . ? B HEM 142 ? 1_555 88.4 ? 14 NE2 ? B HIS 88 ? B HIS 88 ? 1_555 FE ? D HEM . ? B HEM 142 ? 1_555 NC ? D HEM . ? B HEM 142 ? 1_555 105.1 ? 15 NA ? D HEM . ? B HEM 142 ? 1_555 FE ? D HEM . ? B HEM 142 ? 1_555 NC ? D HEM . ? B HEM 142 ? 1_555 162.6 ? 16 NB ? D HEM . ? B HEM 142 ? 1_555 FE ? D HEM . ? B HEM 142 ? 1_555 NC ? D HEM . ? B HEM 142 ? 1_555 89.2 ? 17 NE2 ? B HIS 88 ? B HIS 88 ? 1_555 FE ? D HEM . ? B HEM 142 ? 1_555 ND ? D HEM . ? B HEM 142 ? 1_555 96.5 ? 18 NA ? D HEM . ? B HEM 142 ? 1_555 FE ? D HEM . ? B HEM 142 ? 1_555 ND ? D HEM . ? B HEM 142 ? 1_555 88.4 ? 19 NB ? D HEM . ? B HEM 142 ? 1_555 FE ? D HEM . ? B HEM 142 ? 1_555 ND ? D HEM . ? B HEM 142 ? 1_555 167.2 ? 20 NC ? D HEM . ? B HEM 142 ? 1_555 FE ? D HEM . ? B HEM 142 ? 1_555 ND ? D HEM . ? B HEM 142 ? 1_555 90.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-04-01 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement 3.1 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 X-PLOR phasing . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 HIS _pdbx_validate_rmsd_bond.auth_seq_id_1 88 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 HIS _pdbx_validate_rmsd_bond.auth_seq_id_2 88 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.413 _pdbx_validate_rmsd_bond.bond_target_value 1.354 _pdbx_validate_rmsd_bond.bond_deviation 0.059 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.009 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 117 ? ? -151.28 71.20 2 1 ASP B 73 ? ? -150.95 79.28 3 1 LYS B 114 ? ? 55.04 -121.47 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'PROTOPORPHYRIN IX CONTAINING FE' HEM 4 water HOH #