HEADER VIRUS 17-NOV-93 1CGM TITLE STRUCTURE DETERMINATION OF CUCUMBER GREEN MOTTLE MOSAIC VIRUS BY X-RAY TITLE 2 FIBER DIFFRACTION. SIGNIFICANCE FOR THE EVOLUTION OF TOBAMOVIRUSES COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (5'-R(P*GP*AP*A)-3'); COMPND 3 CHAIN: I; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CUCUMBER GREEN MOTTLE MOSAIC VIRUS; COMPND 7 CHAIN: E; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 ORGANISM_SCIENTIFIC: CUCUMBER GREEN MOTTLE MOSAIC VIRUS; SOURCE 5 ORGANISM_TAXID: 12235; SOURCE 6 TISSUE: WATERMELON KEYWDS VIRUS, HELICAL VIRUS EXPDTA FIBER DIFFRACTION AUTHOR H.WANG,G.STUBBS REVDAT 7 29-NOV-17 1CGM 1 HELIX REVDAT 6 25-AUG-09 1CGM 1 SOURCE REVDAT 5 24-FEB-09 1CGM 1 VERSN REVDAT 4 15-JAN-95 1CGM 3 SEQRES ATOM REVDAT 3 15-OCT-94 1CGM 1 JRNL REVDAT 2 31-JUL-94 1CGM 3 REMARK CRYST1 REVDAT 1 30-APR-94 1CGM 0 JRNL AUTH H.WANG,G.STUBBS JRNL TITL STRUCTURE DETERMINATION OF CUCUMBER GREEN MOTTLE MOSAIC JRNL TITL 2 VIRUS BY X-RAY FIBER DIFFRACTION. SIGNIFICANCE FOR THE JRNL TITL 3 EVOLUTION OF TOBAMOVIRUSES. JRNL REF J.MOL.BIOL. V. 239 371 1994 JRNL REFN ISSN 0022-2836 JRNL PMID 8201619 JRNL DOI 10.1006/JMBI.1994.1379 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.WANG,G.STUBBS REMARK 1 TITL MOLECULAR DYNAMICS IN REFINEMENT AGAINST FIBER DIFFRACTION REMARK 1 TITL 2 DATA REMARK 1 REF ACTA CRYSTALLOGR.,SECT.A V. 49 504 1993 REMARK 1 REFN ISSN 0108-7673 REMARK 1 REFERENCE 2 REMARK 1 AUTH S.LOBERT,G.STUBBS REMARK 1 TITL FIBER DIFFRACTION ANALYSIS OF CUCUMBER GREEN MOTTLE MOSAIC REMARK 1 TITL 2 VIRUS USING LIMITED NUMBERS OF HEAVY-ATOM DERIVATIVES REMARK 1 REF ACTA CRYSTALLOGR.,SECT.A V. 46 993 1990 REMARK 1 REFN ISSN 0108-7673 REMARK 1 REFERENCE 3 REMARK 1 AUTH G.STUBBS REMARK 1 TITL THE PROBABILITY DISTRIBUTIONS OF X-RAY INTENSITIES IN FIBER REMARK 1 TITL 2 DIFFRACTION: LARGEST LIKELY VALUES FOR FIBER DIFFRACTION R REMARK 1 TITL 3 FACTORS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.A V. 45 254 1989 REMARK 1 REFN ISSN 0108-7673 REMARK 1 REFERENCE 4 REMARK 1 AUTH K.NAMBA,G.STUBBS REMARK 1 TITL ISOMORPHOUS REPLACEMENT IN FIBER DIFFRACTION USING LIMITED REMARK 1 TITL 2 NUMBERS OF HEAVY-ATOM DERIVATIVES REMARK 1 REF ACTA CRYSTALLOGR.,SECT.A V. 43 64 1987 REMARK 1 REFN ISSN 0108-7673 REMARK 1 REFERENCE 5 REMARK 1 AUTH K.NAMBA,G.STUBBS REMARK 1 TITL SOLVING THE PHASE PROBLEM IN FIBER DIFFRACTION. APPLICATION REMARK 1 TITL 2 TO TOBACCO MOSAIC VIRUS AT 3.6 ANGSTROMS RESOLUTION REMARK 1 REF ACTA CRYSTALLOGR.,SECT.A V. 41 252 1985 REMARK 1 REFN ISSN 0108-7673 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.093 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1224 REMARK 3 NUCLEIC ACID ATOMS : 67 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 5 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.016 REMARK 3 BOND ANGLES (DEGREES) : 3.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 STRUCTURE WAS DETERMINED FROM FIBER DIFFRACTION DATA BY REMARK 3 MULTI-DIMENSIONAL ISOMORPHOUS REPLACEMENT WITH THREE HEAVY REMARK 3 ATOM DERIVATIVES. CGMMV HAS 36 PERCENT SEQUENCE HOMOLOGY REMARK 3 WITH TOBACCO MOSAIC VIRUS (TMV). THE STRUCTURE INCLUDES REMARK 3 ALL 160 AMINO ACIDS, 3 RNA NUCLEOTIDES (MODELED AS GAA) AND REMARK 3 6 WATER MOLECULES. REMARK 4 REMARK 4 1CGM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172310. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : FIBER DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 205 REMARK 205 FIBER DIFFRACTION REMARK 205 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM FIBER REMARK 205 DIFFRACTION DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 205 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE REMARK 205 VALUES ON THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE FOLLOWING TRANSFORMATION REPRESENTS HELICAL SYMMETRY REMARK 300 WITH THE HELIX AXIS ON THE Z AXIS. APPLYING THIS REMARK 300 TRANSFORMATION 48 TIMES TO THE COORDINATES IN THIS ENTRY REMARK 300 WILL YIELD 49 SUBUNITS IN THREE TURNS OF THE HELIX. THE REMARK 300 FULL (49 SUBUNIT) HELICAL REPEAT IS 70.8 ANGSTROMS LONG IN REMARK 300 THE Z DIRECTION. REMARK 300 MTRIX1 0.926900 -0.375300 0.000000 0.00000 REMARK 300 MTRIX2 0.375300 0.926900 0.000000 0.00000 REMARK 300 MTRIX3 0.000000 0.000000 1.000000 1.44490 REMARK 300 REMARK 300 THE LENGTH OF THE BASIC REPEAT UNIT IS 70.8 ANGSTROMS. REMARK 300 THE NUMBER OF SUBUNITS IN THE BASIC REPEAT UNIT IS 49. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 HELICAL SYMMETRY WITH THE FOLLOWING PARAMETERS: REMARK 300 ROTATION PER SUBUNIT (TWIST) = 1080.00/49 DEGREES REMARK 300 RISE PER SUBUNIT (HEIGHT) = 70.80/49 ANGSTROMS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, E REMARK 350 BIOMT1 1 -0.981559 0.191159 0.000000 0.00000 REMARK 350 BIOMT2 1 -0.191159 -0.981559 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 -34.67755 REMARK 350 BIOMT1 2 -0.838088 0.545535 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.545535 -0.838088 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -33.23265 REMARK 350 BIOMT1 3 -0.572117 0.820172 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.820172 -0.572117 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -31.78776 REMARK 350 BIOMT1 4 -0.222521 0.974928 0.000000 0.00000 REMARK 350 BIOMT2 4 -0.974928 -0.222521 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 -30.34286 REMARK 350 BIOMT1 5 0.159600 0.987182 0.000000 0.00000 REMARK 350 BIOMT2 5 -0.987182 0.159600 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 -28.89796 REMARK 350 BIOMT1 6 0.518393 0.855143 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.855143 0.518393 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 -27.45306 REMARK 350 BIOMT1 7 0.801414 0.598111 0.000000 0.00000 REMARK 350 BIOMT2 7 -0.598111 0.801414 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 1.000000 -26.00816 REMARK 350 BIOMT1 8 0.967295 0.253655 0.000000 0.00000 REMARK 350 BIOMT2 8 -0.253655 0.967295 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 1.000000 -24.56327 REMARK 350 BIOMT1 9 0.991790 -0.127877 0.000000 0.00000 REMARK 350 BIOMT2 9 0.127877 0.991790 0.000000 0.00000 REMARK 350 BIOMT3 9 0.000000 0.000000 1.000000 -23.11837 REMARK 350 BIOMT1 10 0.871319 -0.490718 0.000000 0.00000 REMARK 350 BIOMT2 10 0.490718 0.871319 0.000000 0.00000 REMARK 350 BIOMT3 10 0.000000 0.000000 1.000000 -21.67347 REMARK 350 BIOMT1 11 0.623490 -0.781831 0.000000 0.00000 REMARK 350 BIOMT2 11 0.781831 0.623490 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 1.000000 -20.22857 REMARK 350 BIOMT1 12 0.284528 -0.958668 0.000000 0.00000 REMARK 350 BIOMT2 12 0.958668 0.284528 0.000000 0.00000 REMARK 350 BIOMT3 12 0.000000 0.000000 1.000000 -18.78367 REMARK 350 BIOMT1 13 -0.096023 -0.995379 0.000000 0.00000 REMARK 350 BIOMT2 13 0.995379 -0.096023 0.000000 0.00000 REMARK 350 BIOMT3 13 0.000000 0.000000 1.000000 -17.33878 REMARK 350 BIOMT1 14 -0.462538 -0.886599 0.000000 0.00000 REMARK 350 BIOMT2 14 0.886599 -0.462538 0.000000 0.00000 REMARK 350 BIOMT3 14 0.000000 0.000000 1.000000 -15.89388 REMARK 350 BIOMT1 15 -0.761446 -0.648228 0.000000 0.00000 REMARK 350 BIOMT2 15 0.648228 -0.761446 0.000000 0.00000 REMARK 350 BIOMT3 15 0.000000 0.000000 1.000000 -14.44898 REMARK 350 BIOMT1 16 -0.949056 -0.315108 0.000000 0.00000 REMARK 350 BIOMT2 16 0.315108 -0.949056 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 1.000000 -13.00408 REMARK 350 BIOMT1 17 -0.997945 0.064070 0.000000 0.00000 REMARK 350 BIOMT2 17 -0.064070 -0.997945 0.000000 0.00000 REMARK 350 BIOMT3 17 0.000000 0.000000 1.000000 -11.55918 REMARK 350 BIOMT1 18 -0.900969 0.433884 0.000000 0.00000 REMARK 350 BIOMT2 18 -0.433884 -0.900969 0.000000 0.00000 REMARK 350 BIOMT3 18 0.000000 0.000000 1.000000 -10.11429 REMARK 350 BIOMT1 19 -0.672301 0.740278 0.000000 0.00000 REMARK 350 BIOMT2 19 -0.740278 -0.672301 0.000000 0.00000 REMARK 350 BIOMT3 19 0.000000 0.000000 1.000000 -8.66939 REMARK 350 BIOMT1 20 -0.345365 0.938468 0.000000 0.00000 REMARK 350 BIOMT2 20 -0.938468 -0.345365 0.000000 0.00000 REMARK 350 BIOMT3 20 0.000000 0.000000 1.000000 -7.22449 REMARK 350 BIOMT1 21 0.032052 0.999486 0.000000 0.00000 REMARK 350 BIOMT2 21 -0.999486 0.032052 0.000000 0.00000 REMARK 350 BIOMT3 21 0.000000 0.000000 1.000000 -5.77959 REMARK 350 BIOMT1 22 0.404783 0.914413 0.000000 0.00000 REMARK 350 BIOMT2 22 -0.914413 0.404783 0.000000 0.00000 REMARK 350 BIOMT3 22 0.000000 0.000000 1.000000 -4.33469 REMARK 350 BIOMT1 23 0.718349 0.695683 0.000000 0.00000 REMARK 350 BIOMT2 23 -0.695683 0.718349 0.000000 0.00000 REMARK 350 BIOMT3 23 0.000000 0.000000 1.000000 -2.88980 REMARK 350 BIOMT1 24 0.926917 0.375267 0.000000 0.00000 REMARK 350 BIOMT2 24 -0.375267 0.926917 0.000000 0.00000 REMARK 350 BIOMT3 24 0.000000 0.000000 1.000000 -1.44490 REMARK 350 BIOMT1 25 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 25 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 25 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 26 0.926917 -0.375267 0.000000 0.00000 REMARK 350 BIOMT2 26 0.375267 0.926917 0.000000 0.00000 REMARK 350 BIOMT3 26 0.000000 0.000000 1.000000 1.44490 REMARK 350 BIOMT1 27 0.718349 -0.695683 0.000000 0.00000 REMARK 350 BIOMT2 27 0.695683 0.718349 0.000000 0.00000 REMARK 350 BIOMT3 27 0.000000 0.000000 1.000000 2.88980 REMARK 350 BIOMT1 28 0.404783 -0.914413 0.000000 0.00000 REMARK 350 BIOMT2 28 0.914413 0.404783 0.000000 0.00000 REMARK 350 BIOMT3 28 0.000000 0.000000 1.000000 4.33469 REMARK 350 BIOMT1 29 0.032052 -0.999486 0.000000 0.00000 REMARK 350 BIOMT2 29 0.999486 0.032052 0.000000 0.00000 REMARK 350 BIOMT3 29 0.000000 0.000000 1.000000 5.77959 REMARK 350 BIOMT1 30 -0.345365 -0.938468 0.000000 0.00000 REMARK 350 BIOMT2 30 0.938468 -0.345365 0.000000 0.00000 REMARK 350 BIOMT3 30 0.000000 0.000000 1.000000 7.22449 REMARK 350 BIOMT1 31 -0.672301 -0.740278 0.000000 0.00000 REMARK 350 BIOMT2 31 0.740278 -0.672301 0.000000 0.00000 REMARK 350 BIOMT3 31 0.000000 0.000000 1.000000 8.66939 REMARK 350 BIOMT1 32 -0.900969 -0.433884 0.000000 0.00000 REMARK 350 BIOMT2 32 0.433884 -0.900969 0.000000 0.00000 REMARK 350 BIOMT3 32 0.000000 0.000000 1.000000 10.11429 REMARK 350 BIOMT1 33 -0.997945 -0.064070 0.000000 0.00000 REMARK 350 BIOMT2 33 0.064070 -0.997945 0.000000 0.00000 REMARK 350 BIOMT3 33 0.000000 0.000000 1.000000 11.55918 REMARK 350 BIOMT1 34 -0.949056 0.315108 0.000000 0.00000 REMARK 350 BIOMT2 34 -0.315108 -0.949056 0.000000 0.00000 REMARK 350 BIOMT3 34 0.000000 0.000000 1.000000 13.00408 REMARK 350 BIOMT1 35 -0.761446 0.648228 0.000000 0.00000 REMARK 350 BIOMT2 35 -0.648228 -0.761446 0.000000 0.00000 REMARK 350 BIOMT3 35 0.000000 0.000000 1.000000 14.44898 REMARK 350 BIOMT1 36 -0.462538 0.886599 0.000000 0.00000 REMARK 350 BIOMT2 36 -0.886599 -0.462538 0.000000 0.00000 REMARK 350 BIOMT3 36 0.000000 0.000000 1.000000 15.89388 REMARK 350 BIOMT1 37 -0.096023 0.995379 0.000000 0.00000 REMARK 350 BIOMT2 37 -0.995379 -0.096023 0.000000 0.00000 REMARK 350 BIOMT3 37 0.000000 0.000000 1.000000 17.33878 REMARK 350 BIOMT1 38 0.284528 0.958668 0.000000 0.00000 REMARK 350 BIOMT2 38 -0.958668 0.284528 0.000000 0.00000 REMARK 350 BIOMT3 38 0.000000 0.000000 1.000000 18.78367 REMARK 350 BIOMT1 39 0.623490 0.781831 0.000000 0.00000 REMARK 350 BIOMT2 39 -0.781831 0.623490 0.000000 0.00000 REMARK 350 BIOMT3 39 0.000000 0.000000 1.000000 20.22857 REMARK 350 BIOMT1 40 0.871319 0.490718 0.000000 0.00000 REMARK 350 BIOMT2 40 -0.490718 0.871319 0.000000 0.00000 REMARK 350 BIOMT3 40 0.000000 0.000000 1.000000 21.67347 REMARK 350 BIOMT1 41 0.991790 0.127877 0.000000 0.00000 REMARK 350 BIOMT2 41 -0.127877 0.991790 0.000000 0.00000 REMARK 350 BIOMT3 41 0.000000 0.000000 1.000000 23.11837 REMARK 350 BIOMT1 42 0.967295 -0.253655 0.000000 0.00000 REMARK 350 BIOMT2 42 0.253655 0.967295 0.000000 0.00000 REMARK 350 BIOMT3 42 0.000000 0.000000 1.000000 24.56327 REMARK 350 BIOMT1 43 0.801414 -0.598111 0.000000 0.00000 REMARK 350 BIOMT2 43 0.598111 0.801414 0.000000 0.00000 REMARK 350 BIOMT3 43 0.000000 0.000000 1.000000 26.00816 REMARK 350 BIOMT1 44 0.518393 -0.855143 0.000000 0.00000 REMARK 350 BIOMT2 44 0.855143 0.518393 0.000000 0.00000 REMARK 350 BIOMT3 44 0.000000 0.000000 1.000000 27.45306 REMARK 350 BIOMT1 45 0.159600 -0.987182 0.000000 0.00000 REMARK 350 BIOMT2 45 0.987182 0.159600 0.000000 0.00000 REMARK 350 BIOMT3 45 0.000000 0.000000 1.000000 28.89796 REMARK 350 BIOMT1 46 -0.222521 -0.974928 0.000000 0.00000 REMARK 350 BIOMT2 46 0.974928 -0.222521 0.000000 0.00000 REMARK 350 BIOMT3 46 0.000000 0.000000 1.000000 30.34286 REMARK 350 BIOMT1 47 -0.572117 -0.820172 0.000000 0.00000 REMARK 350 BIOMT2 47 0.820172 -0.572117 0.000000 0.00000 REMARK 350 BIOMT3 47 0.000000 0.000000 1.000000 31.78776 REMARK 350 BIOMT1 48 -0.838088 -0.545535 0.000000 0.00000 REMARK 350 BIOMT2 48 0.545535 -0.838088 0.000000 0.00000 REMARK 350 BIOMT3 48 0.000000 0.000000 1.000000 33.23265 REMARK 350 BIOMT1 49 -0.981559 -0.191159 0.000000 0.00000 REMARK 350 BIOMT2 49 0.191159 -0.981559 0.000000 0.00000 REMARK 350 BIOMT3 49 0.000000 0.000000 1.000000 34.67755 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 G I 1 O3' A I 2 P 0.088 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G I 1 O4' - C4' - C3' ANGL. DEV. = 5.7 DEGREES REMARK 500 G I 1 C3' - C2' - C1' ANGL. DEV. = 8.7 DEGREES REMARK 500 G I 1 O4' - C1' - N9 ANGL. DEV. = 7.5 DEGREES REMARK 500 A I 2 C1' - O4' - C4' ANGL. DEV. = -5.2 DEGREES REMARK 500 A I 2 N9 - C1' - C2' ANGL. DEV. = -14.9 DEGREES REMARK 500 A I 2 O4' - C1' - N9 ANGL. DEV. = 9.3 DEGREES REMARK 500 A I 3 O4' - C1' - N9 ANGL. DEV. = 6.0 DEGREES REMARK 500 THR E 6 CA - C - N ANGL. DEV. = 18.1 DEGREES REMARK 500 TYR E 17 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 TYR E 17 CB - CG - CD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 TYR E 17 CB - CG - CD1 ANGL. DEV. = 4.7 DEGREES REMARK 500 VAL E 18 N - CA - C ANGL. DEV. = 16.9 DEGREES REMARK 500 GLN E 36 CA - C - N ANGL. DEV. = -14.5 DEGREES REMARK 500 THR E 37 CA - C - N ANGL. DEV. = -13.9 DEGREES REMARK 500 ASP E 57 N - CA - C ANGL. DEV. = -18.4 DEGREES REMARK 500 TYR E 68 CA - CB - CG ANGL. DEV. = 11.8 DEGREES REMARK 500 ARG E 77 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG E 90 N - CA - C ANGL. DEV. = 21.0 DEGREES REMARK 500 GLU E 95 N - CA - C ANGL. DEV. = 20.5 DEGREES REMARK 500 GLU E 95 CA - C - N ANGL. DEV. = -18.1 DEGREES REMARK 500 GLU E 95 O - C - N ANGL. DEV. = 9.9 DEGREES REMARK 500 ARG E 113 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG E 141 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 TRP E 152 CD1 - CG - CD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 TRP E 152 CE2 - CD2 - CG ANGL. DEV. = -5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR E 6 -93.06 -85.85 REMARK 500 PRO E 7 -157.71 -82.37 REMARK 500 SER E 8 74.93 -102.60 REMARK 500 LYS E 9 -9.36 -57.00 REMARK 500 ALA E 12 34.29 -90.06 REMARK 500 SER E 14 -60.74 -105.42 REMARK 500 SER E 16 -5.11 -172.24 REMARK 500 PRO E 19 -86.13 -36.56 REMARK 500 ARG E 21 -82.49 -52.00 REMARK 500 GLN E 36 -39.79 -38.80 REMARK 500 THR E 37 -177.21 -54.14 REMARK 500 GLN E 38 -67.60 -100.95 REMARK 500 GLU E 46 -79.63 -52.21 REMARK 500 SER E 47 -78.21 -52.00 REMARK 500 SER E 53 85.53 -58.82 REMARK 500 ASP E 57 -77.22 -110.42 REMARK 500 ILE E 58 -13.97 -147.98 REMARK 500 PRO E 63 84.66 -48.89 REMARK 500 PHE E 67 -53.03 -129.33 REMARK 500 ASN E 72 -75.17 -154.43 REMARK 500 PRO E 74 -70.17 -76.42 REMARK 500 PRO E 78 -78.25 -61.49 REMARK 500 ILE E 79 -77.49 -45.22 REMARK 500 VAL E 81 -69.57 -92.08 REMARK 500 ARG E 90 3.37 -37.68 REMARK 500 VAL E 96 -82.92 -60.38 REMARK 500 VAL E 97 -41.55 -155.92 REMARK 500 PRO E 99 -38.19 -32.34 REMARK 500 GLU E 106 -63.40 -124.25 REMARK 500 ARG E 122 -79.45 -38.46 REMARK 500 LYS E 134 -65.31 -120.46 REMARK 500 PHE E 136 105.91 -54.99 REMARK 500 ASP E 137 -25.52 -171.69 REMARK 500 ASP E 140 -155.91 -99.98 REMARK 500 ARG E 141 -71.09 -62.11 REMARK 500 ALA E 155 -72.82 -92.76 REMARK 500 THR E 156 -84.12 -86.79 REMARK 500 LYS E 159 34.71 -96.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN E 3 PRO E 4 147.02 REMARK 500 LEU E 51 PRO E 52 134.86 REMARK 500 ASN E 101 PRO E 102 -60.12 REMARK 500 REMARK 500 REMARK: NULL DBREF 1CGM E 1 160 UNP P19521 COAT_CGMVS 1 160 DBREF 1CGM I 1 3 PDB 1CGM 1CGM 1 3 SEQRES 1 I 3 G A A SEQRES 1 E 161 ACE ALA TYR ASN PRO ILE THR PRO SER LYS LEU ILE ALA SEQRES 2 E 161 PHE SER ALA SER TYR VAL PRO VAL ARG THR LEU LEU ASN SEQRES 3 E 161 PHE LEU VAL ALA SER GLN GLY THR ALA PHE GLN THR GLN SEQRES 4 E 161 ALA GLY ARG ASP SER PHE ARG GLU SER LEU SER ALA LEU SEQRES 5 E 161 PRO SER SER VAL VAL ASP ILE ASN SER ARG PHE PRO ASP SEQRES 6 E 161 ALA GLY PHE TYR ALA PHE LEU ASN GLY PRO VAL LEU ARG SEQRES 7 E 161 PRO ILE PHE VAL SER LEU LEU SER SER THR ASP THR ARG SEQRES 8 E 161 ASN ARG VAL ILE GLU VAL VAL ASP PRO SER ASN PRO THR SEQRES 9 E 161 THR ALA GLU SER LEU ASN ALA VAL LYS ARG THR ASP ASP SEQRES 10 E 161 ALA SER THR ALA ALA ARG ALA GLU ILE ASP ASN LEU ILE SEQRES 11 E 161 GLU SER ILE SER LYS GLY PHE ASP VAL TYR ASP ARG ALA SEQRES 12 E 161 SER PHE GLU ALA ALA PHE SER VAL VAL TRP SER GLU ALA SEQRES 13 E 161 THR THR SER LYS ALA HET ACE E 0 3 HETNAM ACE ACETYL GROUP FORMUL 2 ACE C2 H4 O FORMUL 3 HOH *5(H2 O) HELIX 1 LS VAL E 18 GLY E 32 1ENDS POORLY DEFINED 15 HELIX 2 RS THR E 37 LEU E 51 1ENDS POORLY DEFINED 15 HELIX 3 RR VAL E 75 SER E 86 1ENDS POORLY DEFINED 12 HELIX 4 LR ALA E 110 PHE E 136 1ENDS POORLY DEFINED 27 LINK C ACE E 0 N ALA E 1 1555 1555 1.34 CRYST1 1.000 1.000 70.800 90.00 90.00 90.00 P 1 49 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000