HEADER OXIDOREDUCTASE 01-APR-99 1CIV TITLE CHLOROPLAST NADP-DEPENDENT MALATE DEHYDROGENASE FROM FLAVERIA BIDENTIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NADP-MALATE DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.1.1.82 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FLAVERIA BIDENTIS; SOURCE 3 ORGANISM_TAXID: 4224; SOURCE 4 ORGAN: LEAF; SOURCE 5 ORGANELLE: CHLOROPLAST; SOURCE 6 OTHER_DETAILS: DARKENED LEAVES KEYWDS CHLOROPLAST, LIGHT ACTIVATED, NADP-DEPENDENT, DEHYDROGENASE, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.D.CARR,A.R.ASHTON,D.VERGER,D.L.OLLIS REVDAT 8 13-NOV-24 1CIV 1 REMARK REVDAT 7 09-AUG-23 1CIV 1 REMARK REVDAT 6 20-NOV-19 1CIV 1 JRNL REVDAT 5 11-APR-18 1CIV 1 REMARK REVDAT 4 04-APR-18 1CIV 1 REMARK REVDAT 3 13-JUL-11 1CIV 1 VERSN REVDAT 2 24-FEB-09 1CIV 1 VERSN REVDAT 1 05-APR-00 1CIV 0 JRNL AUTH P.D.CARR,D.VERGER,A.R.ASHTON,D.L.OLLIS JRNL TITL CHLOROPLAST NADP-MALATE DEHYDROGENASE: STRUCTURAL BASIS OF JRNL TITL 2 LIGHT-DEPENDENT REGULATION OF ACTIVITY BY THIOL OXIDATION JRNL TITL 3 AND REDUCTION. JRNL REF STRUCTURE FOLD.DES. V. 7 461 1999 JRNL REFN ISSN 0969-2126 JRNL PMID 10196131 JRNL DOI 10.1016/S0969-2126(99)80058-6 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.H.MACPHERSON,A.R.ASHTON,P.D.CARR,S.J.TREVANION,D.VERGER, REMARK 1 AUTH 2 D.L.OLLIS REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC STUDIES OF REMARK 1 TITL 2 CHLOROPLAST NADP-DEPENDENT MALATE DEHYDROGENASE FROM REMARK 1 TITL 3 FLAVERIA BIDENTIS. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 54 654 1998 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 9761865 REMARK 1 DOI 10.1107/S0907444997015655 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.84 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : 250.000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 84.8 REMARK 3 NUMBER OF REFLECTIONS : 17473 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : R-FREE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.88 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 56.81 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1096 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE : 0.3720 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 54 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2805 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 106 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : 15.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.740 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : PARAM.NADP REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOP.NADP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1CIV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-APR-99. REMARK 100 THE DEPOSITION ID IS D_1000000787. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-SEP-96 REMARK 200 TEMPERATURE (KELVIN) : 100.00 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20335 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.13200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: 4MDH REMARK 200 REMARK 200 REMARK: BOTH SIRAS AND MOLECULAR REPLACEMENT METHODS WERE USED REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SEE MACPHERSON ET AL. (1998) ACTA REMARK 280 CRYST, D54, 654 - 656, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.26667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 21.63333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 21.63333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.26667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 7020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 255.99711 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 86.53333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 VAL A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 ASP A 6 REMARK 465 GLN A 7 REMARK 465 ILE A 8 REMARK 465 GLN A 9 REMARK 465 ALA A 10 REMARK 465 PRO A 11 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 16 CG CD OE1 NE2 REMARK 470 LYS A 17 CG CD CE NZ REMARK 470 GLU A 19 CG CD OE1 OE2 REMARK 470 TYR A 28 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 30 CG CD1 CD2 REMARK 470 LYS A 31 CG CD CE NZ REMARK 470 GLU A 33 CG CD OE1 OE2 REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 GLU A 35 CG CD OE1 OE2 REMARK 470 THR A 36 OG1 CG2 REMARK 470 LYS A 37 CG CD CE NZ REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 ARG A 83 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 130 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 215 CG CD CE NZ REMARK 470 LYS A 270 CG CD CE NZ REMARK 470 LYS A 327 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 273 N - CA - C ANGL. DEV. = 18.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 15 -15.04 80.28 REMARK 500 VAL A 23 -38.90 116.63 REMARK 500 TYR A 28 -157.96 -57.80 REMARK 500 ASP A 29 -88.62 -70.77 REMARK 500 LEU A 30 108.06 -172.19 REMARK 500 LYS A 31 -45.92 -11.96 REMARK 500 ALA A 32 -3.13 -59.40 REMARK 500 GLU A 34 -71.32 -105.98 REMARK 500 PRO A 160 -15.03 -46.19 REMARK 500 THR A 227 10.29 -64.48 REMARK 500 PRO A 231 96.47 -69.58 REMARK 500 HIS A 239 -7.49 61.13 REMARK 500 TRP A 272 112.64 23.75 REMARK 500 SER A 276 46.13 -75.62 REMARK 500 GLU A 377 28.68 -72.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 386 DBREF 1CIV A 1 385 UNP P46489 MDHP_FLABI 69 453 SEQRES 1 A 385 SER VAL THR SER SER ASP GLN ILE GLN ALA PRO LEU PRO SEQRES 2 A 385 ALA LYS GLN LYS PRO GLU CYS PHE GLY VAL PHE CYS LEU SEQRES 3 A 385 THR TYR ASP LEU LYS ALA GLU GLU GLU THR LYS SER TRP SEQRES 4 A 385 LYS LYS ILE ILE ASN VAL ALA VAL SER GLY ALA ALA GLY SEQRES 5 A 385 MET ILE SER ASN HIS LEU LEU PHE LYS LEU ALA SER GLY SEQRES 6 A 385 GLU VAL PHE GLY PRO ASP GLN PRO ILE SER LEU LYS LEU SEQRES 7 A 385 LEU GLY SER GLU ARG SER PHE ALA ALA LEU GLU GLY VAL SEQRES 8 A 385 ALA MET GLU LEU GLU ASP SER LEU TYR PRO LEU LEU ARG SEQRES 9 A 385 GLN VAL SER ILE GLY ILE ASP PRO TYR GLU ILE PHE GLN SEQRES 10 A 385 ASP ALA GLU TRP ALA LEU LEU ILE GLY ALA LYS PRO ARG SEQRES 11 A 385 GLY PRO GLY MET GLU ARG ALA ASP LEU LEU ASP ILE ASN SEQRES 12 A 385 GLY GLN ILE PHE ALA GLU GLN GLY LYS ALA LEU ASN ALA SEQRES 13 A 385 VAL ALA SER PRO ASN VAL LYS VAL MET VAL VAL GLY ASN SEQRES 14 A 385 PRO CYS ASN THR ASN ALA LEU ILE CYS LEU LYS ASN ALA SEQRES 15 A 385 PRO ASN ILE PRO PRO LYS ASN PHE HIS ALA LEU THR ARG SEQRES 16 A 385 LEU ASP GLU ASN ARG ALA LYS CYS GLN LEU ALA LEU LYS SEQRES 17 A 385 ALA GLY VAL PHE TYR ASP LYS VAL SER ASN VAL THR ILE SEQRES 18 A 385 TRP GLY ASN HIS SER THR THR GLN VAL PRO ASP PHE LEU SEQRES 19 A 385 ASN ALA LYS ILE HIS GLY ILE PRO VAL THR GLU VAL ILE SEQRES 20 A 385 ARG ASP ARG LYS TRP LEU GLU ASP GLU PHE THR ASN MET SEQRES 21 A 385 VAL GLN THR ARG GLY GLY VAL LEU ILE LYS LYS TRP GLY SEQRES 22 A 385 ARG SER SER ALA ALA SER THR ALA VAL SER ILE VAL ASP SEQRES 23 A 385 ALA ILE ARG SER LEU VAL THR PRO THR PRO GLU GLY ASP SEQRES 24 A 385 TRP PHE SER THR GLY VAL TYR THR ASN GLY ASN PRO TYR SEQRES 25 A 385 GLY ILE ALA GLU ASP ILE VAL PHE SER MET PRO CYS ARG SEQRES 26 A 385 SER LYS GLY ASP GLY ASP TYR GLU PHE VAL LYS ASP VAL SEQRES 27 A 385 ILE PHE ASP ASP TYR LEU SER LYS LYS ILE LYS LYS SER SEQRES 28 A 385 GLU ASP GLU LEU LEU ALA GLU LYS LYS CYS VAL ALA HIS SEQRES 29 A 385 LEU THR GLY GLU GLY ILE ALA VAL CYS ASP LEU PRO GLU SEQRES 30 A 385 ASP THR MET LEU PRO GLY GLU MET HET NAP A 386 48 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 HOH *106(H2 O) HELIX 1 1 MET A 53 ALA A 63 1 11 HELIX 2 2 GLU A 82 SER A 98 5 17 HELIX 3 3 PRO A 112 ILE A 115 1 4 HELIX 4 4 ARG A 136 VAL A 157 1 22 HELIX 5 5 CYS A 171 ASN A 181 1 11 HELIX 6 6 PRO A 187 ASN A 189 5 3 HELIX 7 7 ARG A 195 ALA A 209 1 15 HELIX 8 8 VAL A 243 GLU A 245 5 3 HELIX 9 9 ARG A 250 ASP A 255 1 6 HELIX 10 10 PHE A 257 LYS A 270 1 14 HELIX 11 11 ALA A 277 VAL A 292 1 16 HELIX 12 12 ASP A 342 THR A 366 1 25 SHEET 1 A 6 PHE A 190 ALA A 192 0 SHEET 2 A 6 LYS A 163 VAL A 166 1 N VAL A 164 O HIS A 191 SHEET 3 A 6 TRP A 121 LEU A 124 1 N ALA A 122 O LYS A 163 SHEET 4 A 6 ILE A 43 SER A 48 1 N ALA A 46 O TRP A 121 SHEET 5 A 6 ILE A 74 LEU A 79 1 N SER A 75 O ILE A 43 SHEET 6 A 6 LEU A 103 GLY A 109 1 N ARG A 104 O ILE A 74 SHEET 1 B 2 THR A 220 TRP A 222 0 SHEET 2 B 2 VAL A 230 ASP A 232 -1 N ASP A 232 O THR A 220 SHEET 1 C 2 PHE A 301 TYR A 306 0 SHEET 2 C 2 VAL A 319 CYS A 324 -1 N CYS A 324 O PHE A 301 SSBOND 1 CYS A 20 CYS A 25 1555 1555 2.03 SSBOND 2 CYS A 361 CYS A 373 1555 1555 2.03 CISPEP 1 ASN A 169 PRO A 170 0 0.52 SITE 1 AC1 27 GLY A 49 ALA A 50 ALA A 51 GLY A 52 SITE 2 AC1 27 MET A 53 ILE A 54 GLY A 80 SER A 81 SITE 3 AC1 27 SER A 84 ALA A 127 GLN A 150 VAL A 167 SITE 4 AC1 27 GLY A 168 ASN A 169 LEU A 193 HIS A 225 SITE 5 AC1 27 THR A 280 MET A 380 GLU A 384 MET A 385 SITE 6 AC1 27 HOH A 387 HOH A 393 HOH A 394 HOH A 399 SITE 7 AC1 27 HOH A 431 HOH A 440 HOH A 533 CRYST1 147.800 147.800 64.900 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006766 0.003906 0.000000 0.00000 SCALE2 0.000000 0.007812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015408 0.00000 TER 2806 MET A 385 HETATM 2807 PA NAP A 386 6.706 118.290 44.794 1.00 78.41 P HETATM 2808 O1A NAP A 386 5.544 119.204 44.721 1.00 72.41 O HETATM 2809 O2A NAP A 386 8.038 118.955 44.813 1.00 75.24 O HETATM 2810 O5B NAP A 386 6.609 117.318 46.089 1.00 78.01 O HETATM 2811 C5B NAP A 386 7.546 116.226 46.279 1.00 74.67 C HETATM 2812 C4B NAP A 386 7.384 115.621 47.664 1.00 70.33 C HETATM 2813 O4B NAP A 386 8.073 114.412 48.042 1.00 70.43 O HETATM 2814 C3B NAP A 386 7.779 116.607 48.722 1.00 70.37 C HETATM 2815 O3B NAP A 386 6.664 117.468 48.915 1.00 67.54 O HETATM 2816 C2B NAP A 386 8.077 115.714 49.924 1.00 73.29 C HETATM 2817 O2B NAP A 386 7.401 115.918 51.163 1.00 82.88 O HETATM 2818 C1B NAP A 386 7.670 114.366 49.416 1.00 68.95 C HETATM 2819 N9A NAP A 386 7.887 113.241 50.362 1.00 65.96 N HETATM 2820 C8A NAP A 386 8.949 112.422 50.479 1.00 65.52 C HETATM 2821 N7A NAP A 386 8.641 111.351 51.227 1.00 64.10 N HETATM 2822 C5A NAP A 386 7.366 111.546 51.569 1.00 61.26 C HETATM 2823 C6A NAP A 386 6.621 110.751 52.441 1.00 58.59 C HETATM 2824 N6A NAP A 386 7.243 109.947 53.291 1.00 62.74 N HETATM 2825 N1A NAP A 386 5.360 111.168 52.704 1.00 53.65 N HETATM 2826 C2A NAP A 386 4.881 112.313 52.228 1.00 49.81 C HETATM 2827 N3A NAP A 386 5.621 113.086 51.439 1.00 57.71 N HETATM 2828 C4A NAP A 386 6.874 112.728 51.070 1.00 62.19 C HETATM 2829 O3 NAP A 386 6.642 117.234 43.580 1.00 79.03 O HETATM 2830 PN NAP A 386 5.531 116.881 42.476 1.00 84.10 P HETATM 2831 O1N NAP A 386 6.087 117.093 41.108 1.00 83.47 O HETATM 2832 O2N NAP A 386 4.381 117.697 42.921 1.00 83.15 O HETATM 2833 O5D NAP A 386 5.151 115.310 42.661 1.00 79.33 O HETATM 2834 C5D NAP A 386 6.137 114.301 42.972 1.00 76.57 C HETATM 2835 C4D NAP A 386 5.836 112.924 42.375 1.00 72.33 C HETATM 2836 O4D NAP A 386 4.569 112.928 41.675 1.00 70.21 O HETATM 2837 C3D NAP A 386 6.900 112.562 41.354 1.00 71.15 C HETATM 2838 O3D NAP A 386 7.312 111.190 41.374 1.00 69.63 O HETATM 2839 C2D NAP A 386 6.269 113.036 40.048 1.00 69.67 C HETATM 2840 O2D NAP A 386 6.830 112.385 38.903 1.00 69.40 O HETATM 2841 C1D NAP A 386 4.793 112.744 40.264 1.00 65.49 C HETATM 2842 N1N NAP A 386 3.903 113.584 39.434 1.00 58.72 N HETATM 2843 C2N NAP A 386 2.863 112.961 38.740 1.00 59.97 C HETATM 2844 C3N NAP A 386 2.037 113.697 37.898 1.00 63.24 C HETATM 2845 C7N NAP A 386 0.878 113.007 37.163 1.00 69.01 C HETATM 2846 O7N NAP A 386 0.474 113.432 36.075 1.00 75.77 O HETATM 2847 N7N NAP A 386 0.493 111.833 37.656 1.00 66.64 N HETATM 2848 C4N NAP A 386 2.269 115.064 37.741 1.00 58.08 C HETATM 2849 C5N NAP A 386 3.303 115.696 38.431 1.00 57.58 C HETATM 2850 C6N NAP A 386 4.119 114.962 39.288 1.00 56.53 C HETATM 2851 P2B NAP A 386 6.953 117.341 51.748 1.00 92.34 P HETATM 2852 O1X NAP A 386 7.893 118.299 51.101 1.00 92.48 O HETATM 2853 O2X NAP A 386 7.130 117.147 53.206 1.00 89.14 O HETATM 2854 O3X NAP A 386 5.540 117.535 51.347 1.00 88.65 O HETATM 2855 O HOH A 387 6.324 110.535 55.888 1.00 25.34 O HETATM 2856 O HOH A 388 -7.306 103.388 64.779 1.00 29.80 O HETATM 2857 O HOH A 389 -9.723 100.135 58.313 1.00 28.05 O HETATM 2858 O HOH A 390 0.817 130.413 64.093 1.00 6.99 O HETATM 2859 O HOH A 391 -24.278 127.685 53.168 1.00 47.30 O HETATM 2860 O HOH A 392 -19.005 115.068 48.537 1.00 33.29 O HETATM 2861 O HOH A 393 8.458 121.101 46.408 1.00 35.31 O HETATM 2862 O HOH A 394 3.467 118.497 46.317 1.00 9.16 O HETATM 2863 O HOH A 395 4.617 88.708 38.806 1.00 50.76 O HETATM 2864 O HOH A 396 -14.242 121.642 48.628 1.00 29.13 O HETATM 2865 O HOH A 397 -16.694 112.238 49.338 1.00 29.75 O HETATM 2866 O HOH A 398 15.475 111.288 45.281 1.00 38.56 O HETATM 2867 O HOH A 399 9.502 120.207 49.314 1.00 44.15 O HETATM 2868 O HOH A 400 0.645 92.061 52.051 1.00 35.58 O HETATM 2869 O HOH A 401 -14.316 97.884 39.165 1.00 42.01 O HETATM 2870 O HOH A 402 -13.380 105.249 43.980 1.00 15.73 O HETATM 2871 O HOH A 403 -10.277 111.462 35.575 1.00 6.36 O HETATM 2872 O HOH A 404 -4.291 88.798 29.965 1.00 27.19 O HETATM 2873 O HOH A 405 10.108 104.128 54.146 1.00 54.22 O HETATM 2874 O HOH A 406 4.125 116.975 33.315 1.00 18.75 O HETATM 2875 O HOH A 407 1.516 114.523 29.596 1.00 26.33 O HETATM 2876 O HOH A 408 -14.010 113.232 31.742 1.00 17.01 O HETATM 2877 O HOH A 409 -17.252 116.393 35.114 1.00 13.77 O HETATM 2878 O HOH A 410 -14.870 125.893 19.332 1.00 50.38 O HETATM 2879 O HOH A 411 -14.993 93.675 24.018 1.00 12.71 O HETATM 2880 O HOH A 412 -10.391 102.333 12.070 1.00 18.50 O HETATM 2881 O HOH A 413 6.645 106.720 55.115 1.00 35.82 O HETATM 2882 O HOH A 415 -21.950 101.605 28.106 1.00 28.51 O HETATM 2883 O HOH A 416 0.868 91.633 28.824 1.00 14.77 O HETATM 2884 O HOH A 417 -12.511 94.477 24.136 1.00 11.28 O HETATM 2885 O HOH A 419 -13.606 98.469 14.520 1.00 29.77 O HETATM 2886 O HOH A 420 7.434 87.658 41.250 1.00 31.14 O HETATM 2887 O HOH A 421 -0.511 88.897 22.893 1.00 32.02 O HETATM 2888 O HOH A 422 7.657 85.111 42.928 1.00 28.37 O HETATM 2889 O HOH A 424 6.254 95.492 53.168 1.00 45.82 O HETATM 2890 O HOH A 425 -6.072 93.600 48.119 1.00 12.43 O HETATM 2891 O HOH A 426 10.451 117.027 45.414 1.00 43.55 O HETATM 2892 O HOH A 427 -7.251 105.960 19.496 1.00 54.36 O HETATM 2893 O HOH A 428 -5.715 100.159 12.866 1.00 42.38 O HETATM 2894 O HOH A 429 5.192 126.175 39.465 1.00 26.73 O HETATM 2895 O HOH A 430 -8.340 129.408 55.631 1.00 26.77 O HETATM 2896 O HOH A 431 10.050 109.433 53.117 1.00 41.63 O HETATM 2897 O HOH A 432 -0.006 124.991 66.445 1.00 27.19 O HETATM 2898 O HOH A 435 4.018 92.145 42.218 1.00 16.00 O HETATM 2899 O HOH A 437 -16.426 99.525 40.322 1.00 61.95 O HETATM 2900 O HOH A 438 -16.922 115.001 31.429 1.00 50.96 O HETATM 2901 O HOH A 439 11.920 115.401 31.711 1.00 56.11 O HETATM 2902 O HOH A 440 4.198 109.055 54.389 1.00 25.03 O HETATM 2903 O HOH A 441 -13.665 128.108 44.689 1.00 28.13 O HETATM 2904 O HOH A 442 -13.200 103.337 12.759 1.00 28.99 O HETATM 2905 O HOH A 443 -8.488 103.824 8.709 1.00 42.15 O HETATM 2906 O HOH A 444 2.640 113.016 62.937 1.00 25.38 O HETATM 2907 O HOH A 445 3.637 117.241 64.916 1.00 33.98 O HETATM 2908 O HOH A 446 9.127 117.076 63.441 1.00 14.61 O HETATM 2909 O HOH A 447 -8.016 120.116 63.595 1.00 44.28 O HETATM 2910 O HOH A 449 0.310 134.754 54.948 1.00 13.97 O HETATM 2911 O HOH A 455 -11.021 110.271 38.228 1.00 18.10 O HETATM 2912 O HOH A 456 -8.235 109.300 38.370 1.00 20.65 O HETATM 2913 O HOH A 457 -11.035 108.541 23.949 1.00 20.50 O HETATM 2914 O HOH A 458 -3.825 106.528 19.968 1.00 17.75 O HETATM 2915 O HOH A 460 5.350 120.037 33.193 1.00 36.41 O HETATM 2916 O HOH A 462 1.324 98.163 38.082 1.00 25.08 O HETATM 2917 O HOH A 464 -8.852 128.182 41.640 1.00 22.29 O HETATM 2918 O HOH A 466 2.419 125.632 37.802 1.00 20.47 O HETATM 2919 O HOH A 469 6.728 101.798 42.427 1.00 34.70 O HETATM 2920 O HOH A 471 -14.515 116.818 35.954 1.00 38.68 O HETATM 2921 O HOH A 472 -12.942 118.838 32.179 1.00 37.20 O HETATM 2922 O HOH A 473 2.947 105.393 16.969 1.00 39.74 O HETATM 2923 O HOH A 474 19.860 111.240 33.590 1.00 42.52 O HETATM 2924 O HOH A 476 -14.995 121.082 63.895 1.00 35.16 O HETATM 2925 O HOH A 477 -15.845 108.392 18.574 1.00 38.50 O HETATM 2926 O HOH A 478 6.223 109.048 33.922 1.00 31.59 O HETATM 2927 O HOH A 480 -14.518 113.949 28.227 1.00 38.72 O HETATM 2928 O HOH A 481 -17.050 93.352 21.734 1.00 23.24 O HETATM 2929 O HOH A 482 -4.560 91.560 28.085 1.00 22.65 O HETATM 2930 O HOH A 483 6.453 95.164 25.101 1.00 30.65 O HETATM 2931 O HOH A 485 -13.204 89.740 34.215 1.00 34.15 O HETATM 2932 O HOH A 486 -0.275 129.382 67.022 1.00 50.72 O HETATM 2933 O HOH A 487 -16.270 124.241 40.417 1.00 49.31 O HETATM 2934 O HOH A 489 -27.288 110.734 40.364 1.00 44.86 O HETATM 2935 O HOH A 491 -14.563 121.257 33.566 1.00 41.84 O HETATM 2936 O HOH A 493 3.464 121.430 23.060 1.00 40.74 O HETATM 2937 O HOH A 494 -12.905 101.022 14.085 1.00 45.12 O HETATM 2938 O HOH A 495 6.564 116.615 64.331 1.00 43.80 O HETATM 2939 O HOH A 496 -14.961 108.704 59.344 1.00 53.06 O HETATM 2940 O HOH A 497 12.516 111.458 33.093 1.00 46.28 O HETATM 2941 O HOH A 498 12.849 112.741 29.356 1.00 44.67 O HETATM 2942 O HOH A 500 -17.831 120.165 36.624 1.00 40.66 O HETATM 2943 O HOH A 502 -21.742 120.583 19.863 1.00 43.57 O HETATM 2944 O HOH A 505 -9.818 119.806 11.050 1.00 53.26 O HETATM 2945 O HOH A 507 10.767 95.079 50.838 1.00 49.16 O HETATM 2946 O HOH A 508 6.765 82.485 41.450 1.00 39.93 O HETATM 2947 O HOH A 509 1.745 116.246 66.679 1.00 42.41 O HETATM 2948 O HOH A 510 -0.891 120.144 63.808 1.00 44.41 O HETATM 2949 O HOH A 511 4.707 114.569 63.905 1.00 44.98 O HETATM 2950 O HOH A 512 -9.254 107.646 7.739 1.00 51.80 O HETATM 2951 O HOH A 513 11.611 104.923 52.008 1.00 45.14 O HETATM 2952 O HOH A 514 -17.343 109.666 48.296 1.00 34.26 O HETATM 2953 O HOH A 515 -15.209 102.735 43.831 1.00 40.68 O HETATM 2954 O HOH A 517 -1.485 129.505 64.119 1.00 29.05 O HETATM 2955 O HOH A 518 -5.624 91.594 45.967 1.00 46.95 O HETATM 2956 O HOH A 520 -14.678 119.348 27.848 1.00 36.10 O HETATM 2957 O HOH A 528 6.519 98.006 26.402 1.00 44.81 O HETATM 2958 O HOH A 531 -19.701 106.064 23.242 1.00 40.26 O HETATM 2959 O HOH A 532 12.296 106.767 33.694 1.00 20.00 O HETATM 2960 O HOH A 533 10.764 116.341 50.967 1.00 20.00 O CONECT 57 96 CONECT 96 57 CONECT 2633 2713 CONECT 2713 2633 CONECT 2807 2808 2809 2810 2829 CONECT 2808 2807 CONECT 2809 2807 CONECT 2810 2807 2811 CONECT 2811 2810 2812 CONECT 2812 2811 2813 2814 CONECT 2813 2812 2818 CONECT 2814 2812 2815 2816 CONECT 2815 2814 CONECT 2816 2814 2817 2818 CONECT 2817 2816 2851 CONECT 2818 2813 2816 2819 CONECT 2819 2818 2820 2828 CONECT 2820 2819 2821 CONECT 2821 2820 2822 CONECT 2822 2821 2823 2828 CONECT 2823 2822 2824 2825 CONECT 2824 2823 CONECT 2825 2823 2826 CONECT 2826 2825 2827 CONECT 2827 2826 2828 CONECT 2828 2819 2822 2827 CONECT 2829 2807 2830 CONECT 2830 2829 2831 2832 2833 CONECT 2831 2830 CONECT 2832 2830 CONECT 2833 2830 2834 CONECT 2834 2833 2835 CONECT 2835 2834 2836 2837 CONECT 2836 2835 2841 CONECT 2837 2835 2838 2839 CONECT 2838 2837 CONECT 2839 2837 2840 2841 CONECT 2840 2839 CONECT 2841 2836 2839 2842 CONECT 2842 2841 2843 2850 CONECT 2843 2842 2844 CONECT 2844 2843 2845 2848 CONECT 2845 2844 2846 2847 CONECT 2846 2845 CONECT 2847 2845 CONECT 2848 2844 2849 CONECT 2849 2848 2850 CONECT 2850 2842 2849 CONECT 2851 2817 2852 2853 2854 CONECT 2852 2851 CONECT 2853 2851 CONECT 2854 2851 MASTER 327 0 1 12 10 0 7 6 2959 1 52 30 END