HEADER VIRAL PROTEIN 12-APR-99 1CJD TITLE THE BACTERIOPHAGE PRD1 COAT PROTEIN, P3, IS STRUCTURALLY SIMILAR TO TITLE 2 HUMAN ADENOVIRUS HEXON COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (MAJOR CAPSID PROTEIN (P3)); COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE PRD1; SOURCE 3 ORGANISM_TAXID: 10658; SOURCE 4 EXPRESSION_SYSTEM: SALMONELLA TYPHIMURIUM; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 602; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: VIRUS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: BACTERIOPHAGE PRD1 KEYWDS BACTERIOPHAGE PRD1, COAT PROTEIN, JELLY ROLL, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.D.BENSON,J.K.H.BAMFORD,D.H.BAMFORD,R.M.BURNETT REVDAT 5 27-DEC-23 1CJD 1 REMARK REVDAT 4 27-NOV-19 1CJD 1 JRNL REVDAT 3 24-FEB-09 1CJD 1 VERSN REVDAT 2 01-APR-03 1CJD 1 JRNL REVDAT 1 20-SEP-99 1CJD 0 JRNL AUTH S.D.BENSON,J.K.BAMFORD,D.H.BAMFORD,R.M.BURNETT JRNL TITL VIRAL EVOLUTION REVEALED BY BACTERIOPHAGE PRD1 AND HUMAN JRNL TITL 2 ADENOVIRUS COAT PROTEIN STRUCTURES. JRNL REF CELL(CAMBRIDGE,MASS.) V. 98 825 1999 JRNL REFN ISSN 0092-8674 JRNL PMID 10499799 JRNL DOI 10.1016/S0092-8674(00)81516-0 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.L.STEWART,S.GHOSH,D.H.BAMFORD,R.M.BURNETT REMARK 1 TITL CRYSTALLIZATION OF THE MAJOR COAT PROTEIN OF PRD1, A REMARK 1 TITL 2 BACTERIOPHAGE WITH AN INTERNAL MEMBRANE. REMARK 1 REF J.MOL.BIOL. V. 230 349 1993 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 8450547 REMARK 1 DOI 10.1006/JMBI.1993.1148 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.K.BAMFORD,D.H.BAMFORD REMARK 1 TITL CAPSOMER PROTEINS OF BACTERIOPHAGE PRD1, A BACTERIAL VIRUS REMARK 1 TITL 2 WITH A MEMBRANE. REMARK 1 REF VIROLOGY V. 177 445 1990 REMARK 1 REFN ISSN 0042-6822 REMARK 1 PMID 2196741 REMARK 1 DOI 10.1016/0042-6822(90)90508-O REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 78.3 REMARK 3 NUMBER OF REFLECTIONS : 121093 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : SPHERES REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1372 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.93 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 46.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 8869 REMARK 3 BIN R VALUE (WORKING SET) : 0.1960 REMARK 3 BIN FREE R VALUE : 0.2000 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 1.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 100 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8502 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 473 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM SIGMAA (A) : 0.13 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.12 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.800 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 27.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.850 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.560 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.530 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.720 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.170 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : UNRESTRAINED REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : PARAM19.SOL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH19.SOL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 1CJD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-APR-99. REMARK 100 THE DEPOSITION ID IS D_1000000838. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-97 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9500, 0.9786, 0.9790 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRANDEIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 151224 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04600 REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.19700 REMARK 200 FOR SHELL : 9.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: REMARK 200 MAD PHASES WERE COLLECTED ON A SE-MET P3 DERIVATIVE AND THE MODEL REMARK 200 USED TO REMARK 200 PHASE THE NATIVE P3 DATA REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% (W/V) MPD, 0.2 M NACL, 0.1 M REMARK 280 SODIUM ACETATE, PH 4.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 58.97800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.19350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.64800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.19350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 58.97800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.64800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 2 REMARK 465 GLN A 3 REMARK 465 VAL A 4 REMARK 465 GLN A 5 REMARK 465 GLN A 6 REMARK 465 LEU A 7 REMARK 465 THR A 8 REMARK 465 PRO A 9 REMARK 465 ALA A 10 REMARK 465 GLN A 11 REMARK 465 GLN A 12 REMARK 465 ALA A 13 REMARK 465 ALA A 14 REMARK 465 THR A 384 REMARK 465 GLU A 385 REMARK 465 LEU A 386 REMARK 465 VAL A 387 REMARK 465 ASN A 388 REMARK 465 ALA A 389 REMARK 465 GLY A 390 REMARK 465 THR A 391 REMARK 465 ILE A 392 REMARK 465 SER A 393 REMARK 465 THR A 394 REMARK 465 THR A 395 REMARK 465 ALA B 2 REMARK 465 GLN B 3 REMARK 465 VAL B 4 REMARK 465 GLN B 5 REMARK 465 GLN B 6 REMARK 465 LEU B 7 REMARK 465 THR B 8 REMARK 465 PRO B 9 REMARK 465 ALA B 10 REMARK 465 GLN B 11 REMARK 465 GLN B 12 REMARK 465 GLU B 385 REMARK 465 LEU B 386 REMARK 465 VAL B 387 REMARK 465 ASN B 388 REMARK 465 ALA B 389 REMARK 465 GLY B 390 REMARK 465 THR B 391 REMARK 465 ILE B 392 REMARK 465 SER B 393 REMARK 465 THR B 394 REMARK 465 THR B 395 REMARK 465 ALA C 2 REMARK 465 GLN C 3 REMARK 465 VAL C 4 REMARK 465 GLN C 5 REMARK 465 GLN C 6 REMARK 465 LEU C 7 REMARK 465 THR C 8 REMARK 465 PRO C 9 REMARK 465 ALA C 10 REMARK 465 GLN C 11 REMARK 465 GLN C 12 REMARK 465 ALA C 13 REMARK 465 ALA C 14 REMARK 465 LEU C 15 REMARK 465 ASN C 245 REMARK 465 GLY C 246 REMARK 465 GLU C 385 REMARK 465 LEU C 386 REMARK 465 VAL C 387 REMARK 465 ASN C 388 REMARK 465 ALA C 389 REMARK 465 GLY C 390 REMARK 465 THR C 391 REMARK 465 ILE C 392 REMARK 465 SER C 393 REMARK 465 THR C 394 REMARK 465 THR C 395 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 15 CG CD1 CD2 REMARK 470 ARG A 16 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 17 CG OD1 ND2 REMARK 470 GLN A 18 CG CD OE1 NE2 REMARK 470 GLN A 187 CG CD OE1 NE2 REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 GLN A 244 CG CD OE1 NE2 REMARK 470 ASN A 245 CG OD1 ND2 REMARK 470 LEU A 281 CG CD1 CD2 REMARK 470 ASN A 312 CG OD1 ND2 REMARK 470 PHE A 313 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 353 CG CD1 CD2 REMARK 470 GLN A 354 CG CD OE1 NE2 REMARK 470 TYR A 355 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU B 15 CG CD1 CD2 REMARK 470 ARG B 16 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 185 CG1 CG2 REMARK 470 GLN B 187 CG CD OE1 NE2 REMARK 470 SER B 188 OG REMARK 470 LYS B 189 CG CD CE NZ REMARK 470 GLN B 244 CG CD OE1 NE2 REMARK 470 ASN B 245 CG OD1 ND2 REMARK 470 ASN B 312 CG OD1 ND2 REMARK 470 PHE B 313 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU B 353 CG CD1 CD2 REMARK 470 GLN B 354 CG CD OE1 NE2 REMARK 470 TYR B 355 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR B 384 OG1 CG2 REMARK 470 ARG C 16 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 18 CG CD OE1 NE2 REMARK 470 GLN C 19 CG CD OE1 NE2 REMARK 470 GLN C 187 CG CD OE1 NE2 REMARK 470 ASN C 280 CG OD1 ND2 REMARK 470 ASN C 312 CG OD1 ND2 REMARK 470 PHE C 313 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR C 355 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR C 384 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 162 CA - CB - CG ANGL. DEV. = 17.1 DEGREES REMARK 500 LEU B 162 CA - CB - CG ANGL. DEV. = 15.6 DEGREES REMARK 500 LEU C 162 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 LEU C 260 CA - CB - CG ANGL. DEV. = 13.8 DEGREES REMARK 500 LEU C 281 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 82 -30.43 -133.86 REMARK 500 HIS A 109 -109.41 -112.60 REMARK 500 VAL A 185 109.33 -50.37 REMARK 500 PRO A 186 -86.13 -83.44 REMARK 500 GLN A 187 145.86 -32.69 REMARK 500 SER A 188 107.71 69.76 REMARK 500 GLU A 227 161.17 178.90 REMARK 500 GLN A 244 -80.86 -51.22 REMARK 500 ASN A 245 34.86 -73.14 REMARK 500 LEU A 281 -37.09 79.50 REMARK 500 ALA A 311 -83.92 -5.67 REMARK 500 PHE A 313 -173.19 -48.09 REMARK 500 SER A 314 -148.64 -99.72 REMARK 500 ARG A 317 43.80 -157.47 REMARK 500 ALA A 333 16.99 58.73 REMARK 500 THR A 334 -176.05 -170.56 REMARK 500 TYR A 355 65.01 -162.68 REMARK 500 SER B 53 -4.26 -141.83 REMARK 500 HIS B 109 -117.20 -109.25 REMARK 500 ASN B 184 -88.78 -20.49 REMARK 500 VAL B 185 35.02 162.07 REMARK 500 PRO B 186 -1.02 -59.28 REMARK 500 LEU B 281 -49.65 79.75 REMARK 500 ASN B 312 30.52 -62.69 REMARK 500 PHE B 313 2.43 49.04 REMARK 500 ARG B 317 58.71 -171.32 REMARK 500 THR B 334 -175.43 -170.44 REMARK 500 LEU B 353 -42.30 152.73 REMARK 500 TYR B 355 -11.16 -146.92 REMARK 500 ASN B 370 30.37 71.35 REMARK 500 GLU C 43 146.26 -170.52 REMARK 500 HIS C 109 -115.40 -109.50 REMARK 500 LEU C 170 -65.25 -120.43 REMARK 500 ALA C 183 54.90 -115.78 REMARK 500 GLN C 187 -25.80 89.75 REMARK 500 ASN C 280 -145.97 -64.85 REMARK 500 LEU C 281 -11.65 101.20 REMARK 500 ASN C 312 20.40 143.04 REMARK 500 PHE C 313 27.28 34.60 REMARK 500 ARG C 317 59.64 -165.52 REMARK 500 THR C 334 -176.04 -170.02 REMARK 500 LEU C 353 49.50 -86.67 REMARK 500 GLN C 354 -3.01 -165.19 REMARK 500 TYR C 355 -2.57 -153.14 REMARK 500 ASN C 357 124.52 -19.95 REMARK 500 REMARK 500 REMARK: NULL DBREF 1CJD A 2 395 UNP P22535 COA3_BPPRD 1 394 DBREF 1CJD B 2 395 UNP P22535 COA3_BPPRD 1 394 DBREF 1CJD C 2 395 UNP P22535 COA3_BPPRD 1 394 SEQRES 1 A 394 ALA GLN VAL GLN GLN LEU THR PRO ALA GLN GLN ALA ALA SEQRES 2 A 394 LEU ARG ASN GLN GLN ALA MET ALA ALA ASN LEU GLN ALA SEQRES 3 A 394 ARG GLN ILE VAL LEU GLN GLN SER TYR PRO VAL ILE GLN SEQRES 4 A 394 GLN VAL GLU THR GLN THR PHE ASP PRO ALA ASN ARG SER SEQRES 5 A 394 VAL PHE ASP VAL THR PRO ALA ASN VAL GLY ILE VAL LYS SEQRES 6 A 394 GLY PHE LEU VAL LYS VAL THR ALA ALA ILE THR ASN ASN SEQRES 7 A 394 HIS ALA THR GLU ALA VAL ALA LEU THR ASP PHE GLY PRO SEQRES 8 A 394 ALA ASN LEU VAL GLN ARG VAL ILE TYR TYR ASP PRO ASP SEQRES 9 A 394 ASN GLN ARG HIS THR GLU THR SER GLY TRP HIS LEU HIS SEQRES 10 A 394 PHE VAL ASN THR ALA LYS GLN GLY ALA PRO PHE LEU SER SEQRES 11 A 394 SER MET VAL THR ASP SER PRO ILE LYS TYR GLY ASP VAL SEQRES 12 A 394 MET ASN VAL ILE ASP ALA PRO ALA THR ILE ALA ALA GLY SEQRES 13 A 394 ALA THR GLY GLU LEU THR MET TYR TYR TRP VAL PRO LEU SEQRES 14 A 394 ALA TYR SER GLU THR ASP LEU THR GLY ALA VAL LEU ALA SEQRES 15 A 394 ASN VAL PRO GLN SER LYS GLN ARG LEU LYS LEU GLU PHE SEQRES 16 A 394 ALA ASN ASN ASN THR ALA PHE ALA ALA VAL GLY ALA ASN SEQRES 17 A 394 PRO LEU GLU ALA ILE TYR GLN GLY ALA GLY ALA ALA ASP SEQRES 18 A 394 CYS GLU PHE GLU GLU ILE SER TYR THR VAL TYR GLN SER SEQRES 19 A 394 TYR LEU ASP GLN LEU PRO VAL GLY GLN ASN GLY TYR ILE SEQRES 20 A 394 LEU PRO LEU ILE ASP LEU SER THR LEU TYR ASN LEU GLU SEQRES 21 A 394 ASN SER ALA GLN ALA GLY LEU THR PRO ASN VAL ASP PHE SEQRES 22 A 394 VAL VAL GLN TYR ALA ASN LEU TYR ARG TYR LEU SER THR SEQRES 23 A 394 ILE ALA VAL PHE ASP ASN GLY GLY SER PHE ASN ALA GLY SEQRES 24 A 394 THR ASP ILE ASN TYR LEU SER GLN ARG THR ALA ASN PHE SEQRES 25 A 394 SER ASP THR ARG LYS LEU ASP PRO LYS THR TRP ALA ALA SEQRES 26 A 394 GLN THR ARG ARG ARG ILE ALA THR ASP PHE PRO LYS GLY SEQRES 27 A 394 VAL TYR TYR CYS ASP ASN ARG ASP LYS PRO ILE TYR THR SEQRES 28 A 394 LEU GLN TYR GLY ASN VAL GLY PHE VAL VAL ASN PRO LYS SEQRES 29 A 394 THR VAL ASN GLN ASN ALA ARG LEU LEU MET GLY TYR GLU SEQRES 30 A 394 TYR PHE THR SER ARG THR GLU LEU VAL ASN ALA GLY THR SEQRES 31 A 394 ILE SER THR THR SEQRES 1 B 394 ALA GLN VAL GLN GLN LEU THR PRO ALA GLN GLN ALA ALA SEQRES 2 B 394 LEU ARG ASN GLN GLN ALA MET ALA ALA ASN LEU GLN ALA SEQRES 3 B 394 ARG GLN ILE VAL LEU GLN GLN SER TYR PRO VAL ILE GLN SEQRES 4 B 394 GLN VAL GLU THR GLN THR PHE ASP PRO ALA ASN ARG SER SEQRES 5 B 394 VAL PHE ASP VAL THR PRO ALA ASN VAL GLY ILE VAL LYS SEQRES 6 B 394 GLY PHE LEU VAL LYS VAL THR ALA ALA ILE THR ASN ASN SEQRES 7 B 394 HIS ALA THR GLU ALA VAL ALA LEU THR ASP PHE GLY PRO SEQRES 8 B 394 ALA ASN LEU VAL GLN ARG VAL ILE TYR TYR ASP PRO ASP SEQRES 9 B 394 ASN GLN ARG HIS THR GLU THR SER GLY TRP HIS LEU HIS SEQRES 10 B 394 PHE VAL ASN THR ALA LYS GLN GLY ALA PRO PHE LEU SER SEQRES 11 B 394 SER MET VAL THR ASP SER PRO ILE LYS TYR GLY ASP VAL SEQRES 12 B 394 MET ASN VAL ILE ASP ALA PRO ALA THR ILE ALA ALA GLY SEQRES 13 B 394 ALA THR GLY GLU LEU THR MET TYR TYR TRP VAL PRO LEU SEQRES 14 B 394 ALA TYR SER GLU THR ASP LEU THR GLY ALA VAL LEU ALA SEQRES 15 B 394 ASN VAL PRO GLN SER LYS GLN ARG LEU LYS LEU GLU PHE SEQRES 16 B 394 ALA ASN ASN ASN THR ALA PHE ALA ALA VAL GLY ALA ASN SEQRES 17 B 394 PRO LEU GLU ALA ILE TYR GLN GLY ALA GLY ALA ALA ASP SEQRES 18 B 394 CYS GLU PHE GLU GLU ILE SER TYR THR VAL TYR GLN SER SEQRES 19 B 394 TYR LEU ASP GLN LEU PRO VAL GLY GLN ASN GLY TYR ILE SEQRES 20 B 394 LEU PRO LEU ILE ASP LEU SER THR LEU TYR ASN LEU GLU SEQRES 21 B 394 ASN SER ALA GLN ALA GLY LEU THR PRO ASN VAL ASP PHE SEQRES 22 B 394 VAL VAL GLN TYR ALA ASN LEU TYR ARG TYR LEU SER THR SEQRES 23 B 394 ILE ALA VAL PHE ASP ASN GLY GLY SER PHE ASN ALA GLY SEQRES 24 B 394 THR ASP ILE ASN TYR LEU SER GLN ARG THR ALA ASN PHE SEQRES 25 B 394 SER ASP THR ARG LYS LEU ASP PRO LYS THR TRP ALA ALA SEQRES 26 B 394 GLN THR ARG ARG ARG ILE ALA THR ASP PHE PRO LYS GLY SEQRES 27 B 394 VAL TYR TYR CYS ASP ASN ARG ASP LYS PRO ILE TYR THR SEQRES 28 B 394 LEU GLN TYR GLY ASN VAL GLY PHE VAL VAL ASN PRO LYS SEQRES 29 B 394 THR VAL ASN GLN ASN ALA ARG LEU LEU MET GLY TYR GLU SEQRES 30 B 394 TYR PHE THR SER ARG THR GLU LEU VAL ASN ALA GLY THR SEQRES 31 B 394 ILE SER THR THR SEQRES 1 C 394 ALA GLN VAL GLN GLN LEU THR PRO ALA GLN GLN ALA ALA SEQRES 2 C 394 LEU ARG ASN GLN GLN ALA MET ALA ALA ASN LEU GLN ALA SEQRES 3 C 394 ARG GLN ILE VAL LEU GLN GLN SER TYR PRO VAL ILE GLN SEQRES 4 C 394 GLN VAL GLU THR GLN THR PHE ASP PRO ALA ASN ARG SER SEQRES 5 C 394 VAL PHE ASP VAL THR PRO ALA ASN VAL GLY ILE VAL LYS SEQRES 6 C 394 GLY PHE LEU VAL LYS VAL THR ALA ALA ILE THR ASN ASN SEQRES 7 C 394 HIS ALA THR GLU ALA VAL ALA LEU THR ASP PHE GLY PRO SEQRES 8 C 394 ALA ASN LEU VAL GLN ARG VAL ILE TYR TYR ASP PRO ASP SEQRES 9 C 394 ASN GLN ARG HIS THR GLU THR SER GLY TRP HIS LEU HIS SEQRES 10 C 394 PHE VAL ASN THR ALA LYS GLN GLY ALA PRO PHE LEU SER SEQRES 11 C 394 SER MET VAL THR ASP SER PRO ILE LYS TYR GLY ASP VAL SEQRES 12 C 394 MET ASN VAL ILE ASP ALA PRO ALA THR ILE ALA ALA GLY SEQRES 13 C 394 ALA THR GLY GLU LEU THR MET TYR TYR TRP VAL PRO LEU SEQRES 14 C 394 ALA TYR SER GLU THR ASP LEU THR GLY ALA VAL LEU ALA SEQRES 15 C 394 ASN VAL PRO GLN SER LYS GLN ARG LEU LYS LEU GLU PHE SEQRES 16 C 394 ALA ASN ASN ASN THR ALA PHE ALA ALA VAL GLY ALA ASN SEQRES 17 C 394 PRO LEU GLU ALA ILE TYR GLN GLY ALA GLY ALA ALA ASP SEQRES 18 C 394 CYS GLU PHE GLU GLU ILE SER TYR THR VAL TYR GLN SER SEQRES 19 C 394 TYR LEU ASP GLN LEU PRO VAL GLY GLN ASN GLY TYR ILE SEQRES 20 C 394 LEU PRO LEU ILE ASP LEU SER THR LEU TYR ASN LEU GLU SEQRES 21 C 394 ASN SER ALA GLN ALA GLY LEU THR PRO ASN VAL ASP PHE SEQRES 22 C 394 VAL VAL GLN TYR ALA ASN LEU TYR ARG TYR LEU SER THR SEQRES 23 C 394 ILE ALA VAL PHE ASP ASN GLY GLY SER PHE ASN ALA GLY SEQRES 24 C 394 THR ASP ILE ASN TYR LEU SER GLN ARG THR ALA ASN PHE SEQRES 25 C 394 SER ASP THR ARG LYS LEU ASP PRO LYS THR TRP ALA ALA SEQRES 26 C 394 GLN THR ARG ARG ARG ILE ALA THR ASP PHE PRO LYS GLY SEQRES 27 C 394 VAL TYR TYR CYS ASP ASN ARG ASP LYS PRO ILE TYR THR SEQRES 28 C 394 LEU GLN TYR GLY ASN VAL GLY PHE VAL VAL ASN PRO LYS SEQRES 29 C 394 THR VAL ASN GLN ASN ALA ARG LEU LEU MET GLY TYR GLU SEQRES 30 C 394 TYR PHE THR SER ARG THR GLU LEU VAL ASN ALA GLY THR SEQRES 31 C 394 ILE SER THR THR FORMUL 4 HOH *473(H2 O) HELIX 1 1 ASN A 17 GLN A 34 1 18 HELIX 2 2 GLY A 91 ASN A 94 5 4 HELIX 3 3 GLY A 114 GLN A 125 1 12 HELIX 4 4 ALA A 220 ASP A 222 5 3 HELIX 5 5 LEU A 251 SER A 255 1 5 HELIX 6 6 PRO A 321 ILE A 332 1 12 HELIX 7 7 THR A 352 TYR A 355 1 4 HELIX 8 8 LEU B 15 GLN B 34 1 20 HELIX 9 9 GLY B 91 ASN B 94 5 4 HELIX 10 10 GLY B 114 GLN B 125 1 12 HELIX 11 11 ALA B 220 ASP B 222 5 3 HELIX 12 12 LEU B 251 SER B 255 1 5 HELIX 13 13 PRO B 321 ILE B 332 1 12 HELIX 14 14 ASN C 17 GLN C 34 1 18 HELIX 15 15 GLY C 91 ASN C 94 5 4 HELIX 16 16 GLY C 114 GLN C 125 1 12 HELIX 17 17 ASN C 199 ALA C 202 1 4 HELIX 18 18 ALA C 220 ASP C 222 5 3 HELIX 19 19 ASP C 253 SER C 255 5 3 HELIX 20 20 PRO C 321 ILE C 332 1 12 HELIX 21 21 THR C 352 GLN C 354 5 3 SHEET 1 A 4 VAL A 54 VAL A 57 0 SHEET 2 A 4 ARG A 191 PHE A 196 -1 N LEU A 194 O PHE A 55 SHEET 3 A 4 VAL A 96 TYR A 102 -1 N TYR A 102 O ARG A 191 SHEET 4 A 4 GLU A 111 SER A 113 -1 N THR A 112 O VAL A 99 SHEET 1 B 3 THR A 159 PRO A 169 0 SHEET 2 B 3 GLY A 67 ASN A 78 -1 N ILE A 76 O GLY A 160 SHEET 3 B 3 CYS A 223 PHE A 225 -1 N GLU A 224 O THR A 77 SHEET 1 C 4 THR A 256 GLN A 265 0 SHEET 2 C 4 ALA A 371 SER A 382 -1 N THR A 381 O LEU A 257 SHEET 3 C 4 ARG A 283 ASN A 293 -1 N ASP A 292 O ARG A 372 SHEET 4 C 4 VAL A 340 ASP A 344 -1 N CYS A 343 O THR A 287 SHEET 1 D 3 ASP A 273 GLN A 277 0 SHEET 2 D 3 VAL A 358 PRO A 364 -1 N VAL A 362 O PHE A 274 SHEET 3 D 3 ILE A 303 THR A 310 -1 N ARG A 309 O GLY A 359 SHEET 1 E 3 TYR A 36 PHE A 47 0 SHEET 2 E 3 GLU A 227 ASP A 238 -1 N ASP A 238 O TYR A 36 SHEET 3 E 3 ILE A 64 ALA A 75 -1 N ALA A 75 O GLU A 227 SHEET 1 F 4 VAL B 54 VAL B 57 0 SHEET 2 F 4 ARG B 191 PHE B 196 -1 N LEU B 194 O PHE B 55 SHEET 3 F 4 VAL B 96 TYR B 102 -1 N TYR B 102 O ARG B 191 SHEET 4 F 4 GLU B 111 SER B 113 -1 N THR B 112 O VAL B 99 SHEET 1 G 3 THR B 159 PRO B 169 0 SHEET 2 G 3 GLY B 67 ASN B 78 -1 N ILE B 76 O GLY B 160 SHEET 3 G 3 CYS B 223 PHE B 225 -1 N GLU B 224 O THR B 77 SHEET 1 H 4 THR B 256 ALA B 266 0 SHEET 2 H 4 ALA B 371 SER B 382 -1 N THR B 381 O LEU B 257 SHEET 3 H 4 ARG B 283 ASN B 293 -1 N ASP B 292 O ARG B 372 SHEET 4 H 4 VAL B 340 ASP B 344 -1 N CYS B 343 O THR B 287 SHEET 1 I 3 ASP B 273 GLN B 277 0 SHEET 2 I 3 VAL B 358 PRO B 364 -1 N VAL B 362 O PHE B 274 SHEET 3 I 3 ILE B 303 THR B 310 -1 N ARG B 309 O GLY B 359 SHEET 1 J 3 TYR B 36 PHE B 47 0 SHEET 2 J 3 GLU B 227 ASP B 238 -1 N ASP B 238 O TYR B 36 SHEET 3 J 3 ILE B 64 ALA B 75 -1 N ALA B 75 O GLU B 227 SHEET 1 K 4 VAL C 54 VAL C 57 0 SHEET 2 K 4 ARG C 191 PHE C 196 -1 N LEU C 194 O PHE C 55 SHEET 3 K 4 VAL C 96 TYR C 102 -1 N TYR C 102 O ARG C 191 SHEET 4 K 4 GLU C 111 SER C 113 -1 N THR C 112 O VAL C 99 SHEET 1 L 3 THR C 159 PRO C 169 0 SHEET 2 L 3 GLY C 67 ASN C 78 -1 N ILE C 76 O GLY C 160 SHEET 3 L 3 CYS C 223 PHE C 225 -1 N GLU C 224 O THR C 77 SHEET 1 M 4 THR C 256 ALA C 266 0 SHEET 2 M 4 ALA C 371 SER C 382 -1 N THR C 381 O LEU C 257 SHEET 3 M 4 ARG C 283 ASN C 293 -1 N ASP C 292 O ARG C 372 SHEET 4 M 4 VAL C 340 ASP C 344 -1 N CYS C 343 O THR C 287 SHEET 1 N 3 ASP C 273 GLN C 277 0 SHEET 2 N 3 VAL C 358 PRO C 364 -1 N VAL C 362 O PHE C 274 SHEET 3 N 3 ILE C 303 THR C 310 -1 N ARG C 309 O GLY C 359 SHEET 1 O 3 TYR C 36 PHE C 47 0 SHEET 2 O 3 GLU C 227 ASP C 238 -1 N ASP C 238 O TYR C 36 SHEET 3 O 3 ILE C 64 ALA C 75 -1 N ALA C 75 O GLU C 227 CRYST1 117.956 121.296 126.387 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008478 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008244 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007912 0.00000 MTRIX1 1 0.099073 0.989728 0.102942 -11.23530 1 MTRIX2 1 -0.013450 -0.102161 0.994710 4.06490 1 MTRIX3 1 0.994959 -0.099960 0.003165 8.60960 1 MTRIX1 2 0.098976 -0.013544 0.995086 -7.49650 1 MTRIX2 2 0.989644 -0.103222 -0.099896 12.56600 1 MTRIX3 2 0.104089 0.994549 0.003195 -3.09970 1