HEADER GLYCOSYL HYDROLASE 19-JAN-95 1CLC TITLE THREE-DIMENSIONAL STRUCTURE OF ENDOGLUCANASE D AT 1.9 ANGSTROMS TITLE 2 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOGLUCANASE CELD; EC: 3.2.1.4; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM; SOURCE 3 ORGANISM_TAXID: 1515; SOURCE 4 STRAIN: NCIB 10682; EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: BACTERIAL; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PCT603 (PUC8) KEYWDS CELLULASE, ENDOGLUCANASE, GLYCOSYL HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.M.ALZARI,M.B.LASCOMBE REVDAT 3 07-FEB-24 1CLC 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1CLC 1 VERSN REVDAT 1 03-JUN-95 1CLC 0 JRNL AUTH M.B.LASCOMBE,H.SOUCHON,M.JUY,P.M.ALZARI JRNL TITL THREE-DIMENSIONAL STRUCTURE OF ENDOGLUCANASE D AT 1.9 JRNL TITL 2 ANGSTROMS RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.M.ALZARI,M.JUY,H.SOUCHON REMARK 1 TITL ENDOGLUCANASE CELD FROM CLOSTRIDIUM THERMOCELLUM: AN UNUSUAL REMARK 1 TITL 2 STRUCTURE FOR A CANONICAL MECHANISM REMARK 1 REF FOUND.BIOTECH.IND.FERMENT. V. 8 73 1993 REMARK 1 REF 2 RES.[PUBL.] REMARK 1 REFN ISSN 0780-6655 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.JUY,A.G.AMIT,P.M.ALZARI,R.J.POLJAK,M.CLAEYSSENS,P.BEGUIN, REMARK 1 AUTH 2 J.-P.AUBERT REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF A THERMOSTABLE BACTERIAL REMARK 1 TITL 2 CELLULASE REMARK 1 REF NATURE V. 357 89 1992 REMARK 1 REFN ISSN 0028-0836 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 7.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 81837 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4213 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 369 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1CLC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172369. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-94 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.927 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81881 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.80000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 127.60000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 127.60000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 63.80000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 11 REMARK 465 MET A 12 REMARK 465 ILE A 13 REMARK 465 THR A 14 REMARK 465 ASN A 15 REMARK 465 SER A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 VAL A 20 REMARK 465 ASP A 21 REMARK 465 LEU A 22 REMARK 465 GLN A 23 REMARK 465 PRO A 24 REMARK 465 SER A 25 REMARK 465 LEU A 26 REMARK 465 THR A 27 REMARK 465 GLY A 28 REMARK 465 VAL A 29 REMARK 465 PHE A 30 REMARK 465 PRO A 31 REMARK 465 SER A 32 REMARK 465 GLY A 33 REMARK 465 LEU A 34 REMARK 465 SER A 576 REMARK 465 PRO A 577 REMARK 465 GLN A 578 REMARK 465 ASN A 579 REMARK 465 GLU A 580 REMARK 465 VAL A 581 REMARK 465 LEU A 582 REMARK 465 TYR A 583 REMARK 465 GLY A 584 REMARK 465 ASP A 585 REMARK 465 VAL A 586 REMARK 465 ASN A 587 REMARK 465 ASP A 588 REMARK 465 ASP A 589 REMARK 465 GLY A 590 REMARK 465 LYS A 591 REMARK 465 VAL A 592 REMARK 465 ASN A 593 REMARK 465 SER A 594 REMARK 465 THR A 595 REMARK 465 ASP A 596 REMARK 465 LEU A 597 REMARK 465 THR A 598 REMARK 465 LEU A 599 REMARK 465 LEU A 600 REMARK 465 LYS A 601 REMARK 465 ARG A 602 REMARK 465 TYR A 603 REMARK 465 VAL A 604 REMARK 465 LEU A 605 REMARK 465 LYS A 606 REMARK 465 ALA A 607 REMARK 465 VAL A 608 REMARK 465 SER A 609 REMARK 465 THR A 610 REMARK 465 LEU A 611 REMARK 465 PRO A 612 REMARK 465 SER A 613 REMARK 465 SER A 614 REMARK 465 LYS A 615 REMARK 465 ALA A 616 REMARK 465 GLU A 617 REMARK 465 LYS A 618 REMARK 465 ASN A 619 REMARK 465 ALA A 620 REMARK 465 ASP A 621 REMARK 465 VAL A 622 REMARK 465 ASN A 623 REMARK 465 ARG A 624 REMARK 465 ASP A 625 REMARK 465 GLY A 626 REMARK 465 ARG A 627 REMARK 465 VAL A 628 REMARK 465 ASN A 629 REMARK 465 SER A 630 REMARK 465 SER A 631 REMARK 465 ASP A 632 REMARK 465 VAL A 633 REMARK 465 THR A 634 REMARK 465 ILE A 635 REMARK 465 LEU A 636 REMARK 465 SER A 637 REMARK 465 ARG A 638 REMARK 465 TYR A 639 REMARK 465 LEU A 640 REMARK 465 ILE A 641 REMARK 465 ARG A 642 REMARK 465 VAL A 643 REMARK 465 ILE A 644 REMARK 465 GLU A 645 REMARK 465 LYS A 646 REMARK 465 LEU A 647 REMARK 465 PRO A 648 REMARK 465 ILE A 649 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 35 CG1 CG2 CD1 REMARK 470 GLU A 36 CG CD OE1 OE2 REMARK 470 GLU A 46 CG CD OE1 OE2 REMARK 470 GLN A 49 CG CD OE1 NE2 REMARK 470 ILE A 166 CD1 REMARK 470 GLN A 186 CG CD OE1 NE2 REMARK 470 GLN A 319 CG CD OE1 NE2 REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 GLU A 377 CG CD OE1 OE2 REMARK 470 ARG A 381 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 385 CG OD1 ND2 REMARK 470 GLN A 389 CG CD OE1 NE2 REMARK 470 SER A 391 OG REMARK 470 LYS A 392 CG CD CE NZ REMARK 470 GLU A 415 CG CD OE1 OE2 REMARK 470 SER A 437 OG REMARK 470 ARG A 440 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 575 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 177 O HOH A 939 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 64 12.82 83.27 REMARK 500 CYS A 75 -178.97 -173.24 REMARK 500 SER A 76 -64.34 -153.64 REMARK 500 SER A 192 38.80 -146.92 REMARK 500 LYS A 194 -170.13 76.90 REMARK 500 ALA A 199 -129.30 -157.19 REMARK 500 PRO A 293 147.73 -39.53 REMARK 500 THR A 351 -158.61 -97.71 REMARK 500 ASP A 399 -160.70 -160.50 REMARK 500 SER A 477 84.21 -152.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 653 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 155 SG REMARK 620 2 CYS A 173 SG 125.0 REMARK 620 3 HIS A 174 ND1 112.8 101.8 REMARK 620 4 HIS A 197 NE2 103.1 99.4 114.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 650 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 236 O REMARK 620 2 ASN A 239 OD1 78.6 REMARK 620 3 ILE A 241 O 162.0 83.5 REMARK 620 4 ASP A 243 OD1 93.9 167.0 104.1 REMARK 620 5 ASP A 246 OD2 91.5 91.3 86.4 99.5 REMARK 620 6 HOH A 741 O 96.6 83.9 83.9 86.5 169.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 651 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 356 OG1 REMARK 620 2 SER A 358 O 74.5 REMARK 620 3 ASP A 361 OD1 144.5 84.8 REMARK 620 4 ASP A 361 OD2 151.8 132.7 51.4 REMARK 620 5 ASP A 362 OD1 118.5 79.0 84.3 79.7 REMARK 620 6 ASP A 401 O 77.4 135.2 99.2 76.4 145.7 REMARK 620 7 HOH A 677 O 78.1 123.0 137.2 88.8 71.9 83.4 REMARK 620 8 HOH A 730 O 71.4 75.1 75.7 105.1 148.4 63.1 138.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 652 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 520 O REMARK 620 2 ASP A 523 OD1 84.9 REMARK 620 3 ILE A 525 O 174.4 92.9 REMARK 620 4 HOH A 668 O 93.2 162.1 90.4 REMARK 620 5 HOH A 686 O 95.9 75.6 88.5 86.8 REMARK 620 6 HOH A 856 O 89.9 88.0 84.9 109.9 162.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 650 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 651 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 652 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 653 DBREF 1CLC A 12 647 UNP P04954 GUND_CLOTM 4 647 SEQADV 1CLC ILE A 13 UNP P04954 THR 5 CONFLICT SEQADV 1CLC THR A 14 UNP P04954 LEU 6 CONFLICT SEQADV 1CLC ASN A 15 UNP P04954 LYS 7 CONFLICT SEQADV 1CLC A UNP P04954 SER 9 DELETION SEQADV 1CLC A UNP P04954 MET 10 DELETION SEQADV 1CLC A UNP P04954 LYS 11 DELETION SEQADV 1CLC A UNP P04954 LYS 12 DELETION SEQADV 1CLC A UNP P04954 VAL 14 DELETION SEQADV 1CLC GLY A 18 UNP P04954 LEU 15 CONFLICT SEQADV 1CLC A UNP P04954 LEU 17 DELETION SEQADV 1CLC A UNP P04954 LEU 18 DELETION SEQADV 1CLC A UNP P04954 ILE 19 DELETION SEQADV 1CLC A UNP P04954 ALA 20 DELETION SEQADV 1CLC A UNP P04954 VAL 21 DELETION SEQADV 1CLC ASP A 21 UNP P04954 PHE 23 CONFLICT SEQADV 1CLC GLN A 23 UNP P04954 INSERTION SEQADV 1CLC PRO A 24 UNP P04954 INSERTION SEQRES 1 A 639 THR MET ILE THR ASN SER ARG GLY SER VAL ASP LEU GLN SEQRES 2 A 639 PRO SER LEU THR GLY VAL PHE PRO SER GLY LEU ILE GLU SEQRES 3 A 639 THR LYS VAL SER ALA ALA LYS ILE THR GLU ASN TYR GLN SEQRES 4 A 639 PHE ASP SER ARG ILE ARG LEU ASN SER ILE GLY PHE ILE SEQRES 5 A 639 PRO ASN HIS SER LYS LYS ALA THR ILE ALA ALA ASN CYS SEQRES 6 A 639 SER THR PHE TYR VAL VAL LYS GLU ASP GLY THR ILE VAL SEQRES 7 A 639 TYR THR GLY THR ALA THR SER MET PHE ASP ASN ASP THR SEQRES 8 A 639 LYS GLU THR VAL TYR ILE ALA ASP PHE SER SER VAL ASN SEQRES 9 A 639 GLU GLU GLY THR TYR TYR LEU ALA VAL PRO GLY VAL GLY SEQRES 10 A 639 LYS SER VAL ASN PHE LYS ILE ALA MET ASN VAL TYR GLU SEQRES 11 A 639 ASP ALA PHE LYS THR ALA MET LEU GLY MET TYR LEU LEU SEQRES 12 A 639 ARG CYS GLY THR SER VAL SER ALA THR TYR ASN GLY ILE SEQRES 13 A 639 HIS TYR SER HIS GLY PRO CYS HIS THR ASN ASP ALA TYR SEQRES 14 A 639 LEU ASP TYR ILE ASN GLY GLN HIS THR LYS LYS ASP SER SEQRES 15 A 639 THR LYS GLY TRP HIS ASP ALA GLY ASP TYR ASN LYS TYR SEQRES 16 A 639 VAL VAL ASN ALA GLY ILE THR VAL GLY SER MET PHE LEU SEQRES 17 A 639 ALA TRP GLU HIS PHE LYS ASP GLN LEU GLU PRO VAL ALA SEQRES 18 A 639 LEU GLU ILE PRO GLU LYS ASN ASN SER ILE PRO ASP PHE SEQRES 19 A 639 LEU ASP GLU LEU LYS TYR GLU ILE ASP TRP ILE LEU THR SEQRES 20 A 639 MET GLN TYR PRO ASP GLY SER GLY ARG VAL ALA HIS LYS SEQRES 21 A 639 VAL SER THR ARG ASN PHE GLY GLY PHE ILE MET PRO GLU SEQRES 22 A 639 ASN GLU HIS ASP GLU ARG PHE PHE VAL PRO TRP SER SER SEQRES 23 A 639 ALA ALA THR ALA ASP PHE VAL ALA MET THR ALA MET ALA SEQRES 24 A 639 ALA ARG ILE PHE ARG PRO TYR ASP PRO GLN TYR ALA GLU SEQRES 25 A 639 LYS CYS ILE ASN ALA ALA LYS VAL SER TYR GLU PHE LEU SEQRES 26 A 639 LYS ASN ASN PRO ALA ASN VAL PHE ALA ASN GLN SER GLY SEQRES 27 A 639 PHE SER THR GLY GLU TYR ALA THR VAL SER ASP ALA ASP SEQRES 28 A 639 ASP ARG LEU TRP ALA ALA ALA GLU MET TRP GLU THR LEU SEQRES 29 A 639 GLY ASP GLU GLU TYR LEU ARG ASP PHE GLU ASN ARG ALA SEQRES 30 A 639 ALA GLN PHE SER LYS LYS ILE GLU ALA ASP PHE ASP TRP SEQRES 31 A 639 ASP ASN VAL ALA ASN LEU GLY MET PHE THR TYR LEU LEU SEQRES 32 A 639 SER GLU ARG PRO GLY LYS ASN PRO ALA LEU VAL GLN SER SEQRES 33 A 639 ILE LYS ASP SER LEU LEU SER THR ALA ASP SER ILE VAL SEQRES 34 A 639 ARG THR SER GLN ASN HIS GLY TYR GLY ARG THR LEU GLY SEQRES 35 A 639 THR THR TYR TYR TRP GLY CYS ASN GLY THR VAL VAL ARG SEQRES 36 A 639 GLN THR MET ILE LEU GLN VAL ALA ASN LYS ILE SER PRO SEQRES 37 A 639 ASN ASN ASP TYR VAL ASN ALA ALA LEU ASP ALA ILE SER SEQRES 38 A 639 HIS VAL PHE GLY ARG ASN TYR TYR ASN ARG SER TYR VAL SEQRES 39 A 639 THR GLY LEU GLY ILE ASN PRO PRO MET ASN PRO HIS ASP SEQRES 40 A 639 ARG ARG SER GLY ALA ASP GLY ILE TRP GLU PRO TRP PRO SEQRES 41 A 639 GLY TYR LEU VAL GLY GLY GLY TRP PRO GLY PRO LYS ASP SEQRES 42 A 639 TRP VAL ASP ILE GLN ASP SER TYR GLN THR ASN GLU ILE SEQRES 43 A 639 ALA ILE ASN TRP ASN ALA ALA LEU ILE TYR ALA LEU ALA SEQRES 44 A 639 GLY PHE VAL ASN TYR ASN SER PRO GLN ASN GLU VAL LEU SEQRES 45 A 639 TYR GLY ASP VAL ASN ASP ASP GLY LYS VAL ASN SER THR SEQRES 46 A 639 ASP LEU THR LEU LEU LYS ARG TYR VAL LEU LYS ALA VAL SEQRES 47 A 639 SER THR LEU PRO SER SER LYS ALA GLU LYS ASN ALA ASP SEQRES 48 A 639 VAL ASN ARG ASP GLY ARG VAL ASN SER SER ASP VAL THR SEQRES 49 A 639 ILE LEU SER ARG TYR LEU ILE ARG VAL ILE GLU LYS LEU SEQRES 50 A 639 PRO ILE HET CA A 650 1 HET CA A 651 1 HET CA A 652 1 HET ZN A 653 1 HETNAM CA CALCIUM ION HETNAM ZN ZINC ION FORMUL 2 CA 3(CA 2+) FORMUL 5 ZN ZN 2+ FORMUL 6 HOH *369(H2 O) HELIX 1 1 GLU A 140 LEU A 153 1 14 HELIX 2 2 VAL A 206 HIS A 222 1 17 HELIX 3 3 LYS A 224 LEU A 227 1 4 HELIX 4 4 PRO A 235 ASN A 238 5 4 HELIX 5 5 ASP A 243 MET A 258 1 16 HELIX 6 6 PRO A 282 ASN A 284 5 3 HELIX 7 7 SER A 296 PHE A 313 1 18 HELIX 8 8 PRO A 318 ASN A 337 1 20 HELIX 9 9 ALA A 360 LEU A 374 1 15 HELIX 10 10 GLU A 377 GLN A 389 1 13 HELIX 11 11 ALA A 404 LEU A 413 1 10 HELIX 12 12 PRO A 421 GLN A 443 1 23 HELIX 13 13 CYS A 459 ILE A 476 1 18 HELIX 14 14 ASN A 480 PHE A 494 1 15 HELIX 15 15 ARG A 518 ALA A 522 1 5 HELIX 16 16 ILE A 558 PHE A 571 1 14 SHEET 1 A 3 LYS A 68 ILE A 71 0 SHEET 2 A 3 GLU A 103 ASP A 109 -1 N ALA A 108 O ALA A 69 SHEET 3 A 3 THR A 94 ASP A 98 -1 N ASP A 98 O GLU A 103 SHEET 1 B 4 PHE A 132 ILE A 134 0 SHEET 2 B 4 GLY A 117 ALA A 122 -1 N TYR A 119 O PHE A 132 SHEET 3 B 4 THR A 77 LYS A 82 -1 N VAL A 81 O TYR A 120 SHEET 4 B 4 ILE A 87 THR A 92 -1 N GLY A 91 O PHE A 78 SHEET 1 C 2 VAL A 159 TYR A 163 0 SHEET 2 C 2 ILE A 166 HIS A 170 -1 N HIS A 170 O VAL A 159 SHEET 1 D 2 LYS A 270 SER A 272 0 SHEET 2 D 2 PHE A 290 VAL A 292 -1 N VAL A 292 O LYS A 270 LINK SG CYS A 155 ZN ZN A 653 1555 1555 2.35 LINK SG CYS A 173 ZN ZN A 653 1555 1555 2.20 LINK ND1 HIS A 174 ZN ZN A 653 1555 1555 2.26 LINK NE2 HIS A 197 ZN ZN A 653 1555 1555 2.29 LINK O GLU A 236 CA CA A 650 1555 1555 2.34 LINK OD1 ASN A 239 CA CA A 650 1555 1555 2.33 LINK O ILE A 241 CA CA A 650 1555 1555 2.37 LINK OD1 ASP A 243 CA CA A 650 1555 1555 2.33 LINK OD2 ASP A 246 CA CA A 650 1555 1555 2.33 LINK OG1 THR A 356 CA CA A 651 1555 1555 2.36 LINK O SER A 358 CA CA A 651 1555 1555 2.55 LINK OD1 ASP A 361 CA CA A 651 1555 1555 2.47 LINK OD2 ASP A 361 CA CA A 651 1555 1555 2.51 LINK OD1 ASP A 362 CA CA A 651 1555 1555 2.44 LINK O ASP A 401 CA CA A 651 1555 1555 2.47 LINK O SER A 520 CA CA A 652 1555 1555 2.30 LINK OD1 ASP A 523 CA CA A 652 1555 1555 2.37 LINK O ILE A 525 CA CA A 652 1555 1555 2.24 LINK CA CA A 650 O HOH A 741 1555 1555 2.40 LINK CA CA A 651 O HOH A 677 1555 1555 2.27 LINK CA CA A 651 O HOH A 730 1555 1555 2.52 LINK CA CA A 652 O HOH A 668 1555 1555 2.36 LINK CA CA A 652 O HOH A 686 1555 1555 2.45 LINK CA CA A 652 O HOH A 856 1555 1555 2.33 CISPEP 1 ASP A 177 ALA A 178 0 -1.09 CISPEP 2 TRP A 538 PRO A 539 0 0.31 SITE 1 AC1 6 GLU A 236 ASN A 239 ILE A 241 ASP A 243 SITE 2 AC1 6 ASP A 246 HOH A 741 SITE 1 AC2 7 THR A 356 SER A 358 ASP A 361 ASP A 362 SITE 2 AC2 7 ASP A 401 HOH A 677 HOH A 730 SITE 1 AC3 6 SER A 520 ASP A 523 ILE A 525 HOH A 668 SITE 2 AC3 6 HOH A 686 HOH A 856 SITE 1 AC4 4 CYS A 155 CYS A 173 HIS A 174 HIS A 197 CRYST1 98.900 98.900 191.400 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010111 0.005838 0.000000 0.00000 SCALE2 0.000000 0.011675 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005225 0.00000