data_1CTF # _entry.id 1CTF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1CTF WWPDB D_1000172518 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1CTF _pdbx_database_status.recvd_initial_deposition_date 1986-09-02 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Leijonmarck, M.' 1 'Liljas, A.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structure of the C-terminal domain of the ribosomal protein L7/L12 from Escherichia coli at 1.7 A.' J.Mol.Biol. 195 555 579 1987 JMOBAK UK 0022-2836 0070 ? 3309338 '10.1016/0022-2836(87)90183-5' 1 'Structural Studies on the Protein L7(Slash)L12 from E. Coli Ribosomes' 'Structural Aspects of Recognition and Assembly in Biological Macromolecules' ? 761 ? 1981 ? ? 0-86689-004-1 0994 'Balaban International Science Services,Rehovot' ? ? 2 'Crystal Structure of a Ribosomal Component at 2.6 Angstroms Resolution' Nature 286 824 ? 1980 NATUAS UK 0028-0836 0006 ? ? ? 3 'Isolation and Crystallization of Stable Domains of the Protein L7(Slash)L12 from Escherichia Coli Ribosomes' 'FEBS Lett.' 88 300 ? 1978 FEBLAL NE 0014-5793 0165 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Leijonmarck, M.' 1 primary 'Liljas, A.' 2 1 'Leijonmarck, M.' 3 1 'Pettersson, I.' 4 1 'Liljas, A.' 5 2 'Leijonmarck, M.' 6 2 'Eriksson, S.' 7 2 'Liljas, A.' 8 3 'Liljas, A.' 9 3 'Eriksson, S.' 10 3 'Donner, D.' 11 3 'Kurland, C.G.' 12 # loop_ _citation_editor.citation_id _citation_editor.name _citation_editor.ordinal 1 'Balaban, M.' 1 1 'Sussman, J.L.' 2 1 'Traub, W.' 3 1 'Yonath, A.' 4 1 'Feldmann, R.' 5 # _cell.entry_id 1CTF _cell.length_a 54.830 _cell.length_b 54.830 _cell.length_c 42.670 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CTF _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RIBOSOMAL PROTEIN L7/L12' 7573.641 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 water nat water 18.015 62 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code AAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK _entity_poly.pdbx_seq_one_letter_code_can AAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 GLU n 1 4 GLU n 1 5 LYS n 1 6 THR n 1 7 GLU n 1 8 PHE n 1 9 ASP n 1 10 VAL n 1 11 ILE n 1 12 LEU n 1 13 LYS n 1 14 ALA n 1 15 ALA n 1 16 GLY n 1 17 ALA n 1 18 ASN n 1 19 LYS n 1 20 VAL n 1 21 ALA n 1 22 VAL n 1 23 ILE n 1 24 LYS n 1 25 ALA n 1 26 VAL n 1 27 ARG n 1 28 GLY n 1 29 ALA n 1 30 THR n 1 31 GLY n 1 32 LEU n 1 33 GLY n 1 34 LEU n 1 35 LYS n 1 36 GLU n 1 37 ALA n 1 38 LYS n 1 39 ASP n 1 40 LEU n 1 41 VAL n 1 42 GLU n 1 43 SER n 1 44 ALA n 1 45 PRO n 1 46 ALA n 1 47 ALA n 1 48 LEU n 1 49 LYS n 1 50 GLU n 1 51 GLY n 1 52 VAL n 1 53 SER n 1 54 LYS n 1 55 ASP n 1 56 ASP n 1 57 ALA n 1 58 GLU n 1 59 ALA n 1 60 LEU n 1 61 LYS n 1 62 LYS n 1 63 ALA n 1 64 LEU n 1 65 GLU n 1 66 GLU n 1 67 ALA n 1 68 GLY n 1 69 ALA n 1 70 GLU n 1 71 VAL n 1 72 GLU n 1 73 VAL n 1 74 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RL7_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P0A7K2 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;SITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGL KEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1CTF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 74 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0A7K2 _struct_ref_seq.db_align_beg 47 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 120 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 47 _struct_ref_seq.pdbx_auth_seq_align_end 120 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1CTF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_percent_sol 41.90 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1CTF _refine.ls_number_reflns_obs 6617 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 1.7 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1740000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 487 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 62 _refine_hist.number_atoms_total 554 _refine_hist.d_res_high 1.7 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function o_bond_d 0.025 ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1CTF _struct.title 'STRUCTURE OF THE C-TERMINAL DOMAIN OF THE RIBOSOMAL PROTEIN L7/L12 FROM ESCHERICHIA COLI AT 1.7 ANGSTROMS' _struct.pdbx_descriptor 'L7/L12 50 S RIBOSOMAL PROTEIN (C-TERMINAL DOMAIN)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1CTF _struct_keywords.pdbx_keywords 'RIBOSOMAL PROTEIN' _struct_keywords.text 'RIBOSOMAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A ASN A 18 ? GLY A 31 ? ASN A 64 GLY A 77 1 'H-BONDS LINK C(I) TO N(I+4)' 14 HELX_P HELX_P2 B GLY A 33 ? GLU A 42 ? GLY A 79 GLU A 88 1 'H-BONDS LINK C(I) TO N(I+4)' 10 HELX_P HELX_P3 C SER A 53 ? ALA A 67 ? SER A 99 ALA A 113 1 'H-BONDS LINK C(I) TO N(I+4)' 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 44 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 90 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 45 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 91 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.24 # _struct_sheet.id I _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense I 1 2 ? anti-parallel I 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id I 1 ALA A 46 ? VAL A 52 ? ALA A 92 VAL A 98 I 2 PHE A 8 ? ALA A 14 ? PHE A 54 ALA A 60 I 3 GLU A 70 ? LYS A 74 ? GLU A 116 LYS A 120 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id I 1 2 O VAL A 52 ? O VAL A 98 N PHE A 8 ? N PHE A 54 I 2 3 O ALA A 14 ? O ALA A 60 N GLU A 70 ? N GLU A 116 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE SO4 A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ALA A 15 ? ALA A 61 . ? 1_555 ? 2 AC1 7 GLY A 16 ? GLY A 62 . ? 1_555 ? 3 AC1 7 LYS A 19 ? LYS A 65 . ? 1_555 ? 4 AC1 7 HOH C . ? HOH A 131 . ? 1_555 ? 5 AC1 7 HOH C . ? HOH A 133 . ? 5_544 ? 6 AC1 7 HOH C . ? HOH A 144 . ? 3_544 ? 7 AC1 7 HOH C . ? HOH A 165 . ? 5_544 ? # _database_PDB_matrix.entry_id 1CTF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1CTF _atom_sites.fract_transf_matrix[1][1] .018238 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] .018238 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] .023436 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'THE ELECTRON DENSITY FOR RESIDUE LYS 59 IS POORLY DEFINED FROM CD TO NZ.' 2 'THE ELECTRON DENSITY FOR RESIDUES LYS 81, LYS 108, LYS 120 IS POORLY DEFINED FROM CG TO NZ.' 3 'RESIDUE PRO 91 IS A CIS PROLINE.' # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 47 ? ? ? A . n A 1 2 ALA 2 48 ? ? ? A . n A 1 3 GLU 3 49 ? ? ? A . n A 1 4 GLU 4 50 ? ? ? A . n A 1 5 LYS 5 51 ? ? ? A . n A 1 6 THR 6 52 ? ? ? A . n A 1 7 GLU 7 53 53 GLU GLU A . n A 1 8 PHE 8 54 54 PHE PHE A . n A 1 9 ASP 9 55 55 ASP ASP A . n A 1 10 VAL 10 56 56 VAL VAL A . n A 1 11 ILE 11 57 57 ILE ILE A . n A 1 12 LEU 12 58 58 LEU LEU A . n A 1 13 LYS 13 59 59 LYS LYS A . n A 1 14 ALA 14 60 60 ALA ALA A . n A 1 15 ALA 15 61 61 ALA ALA A . n A 1 16 GLY 16 62 62 GLY GLY A . n A 1 17 ALA 17 63 63 ALA ALA A . n A 1 18 ASN 18 64 64 ASN ASN A . n A 1 19 LYS 19 65 65 LYS LYS A . n A 1 20 VAL 20 66 66 VAL VAL A . n A 1 21 ALA 21 67 67 ALA ALA A . n A 1 22 VAL 22 68 68 VAL VAL A . n A 1 23 ILE 23 69 69 ILE ILE A . n A 1 24 LYS 24 70 70 LYS LYS A . n A 1 25 ALA 25 71 71 ALA ALA A . n A 1 26 VAL 26 72 72 VAL VAL A . n A 1 27 ARG 27 73 73 ARG ARG A . n A 1 28 GLY 28 74 74 GLY GLY A . n A 1 29 ALA 29 75 75 ALA ALA A . n A 1 30 THR 30 76 76 THR THR A . n A 1 31 GLY 31 77 77 GLY GLY A . n A 1 32 LEU 32 78 78 LEU LEU A . n A 1 33 GLY 33 79 79 GLY GLY A . n A 1 34 LEU 34 80 80 LEU LEU A . n A 1 35 LYS 35 81 81 LYS LYS A . n A 1 36 GLU 36 82 82 GLU GLU A . n A 1 37 ALA 37 83 83 ALA ALA A . n A 1 38 LYS 38 84 84 LYS LYS A . n A 1 39 ASP 39 85 85 ASP ASP A . n A 1 40 LEU 40 86 86 LEU LEU A . n A 1 41 VAL 41 87 87 VAL VAL A . n A 1 42 GLU 42 88 88 GLU GLU A . n A 1 43 SER 43 89 89 SER SER A . n A 1 44 ALA 44 90 90 ALA ALA A . n A 1 45 PRO 45 91 91 PRO PRO A . n A 1 46 ALA 46 92 92 ALA ALA A . n A 1 47 ALA 47 93 93 ALA ALA A . n A 1 48 LEU 48 94 94 LEU LEU A . n A 1 49 LYS 49 95 95 LYS LYS A . n A 1 50 GLU 50 96 96 GLU GLU A . n A 1 51 GLY 51 97 97 GLY GLY A . n A 1 52 VAL 52 98 98 VAL VAL A . n A 1 53 SER 53 99 99 SER SER A . n A 1 54 LYS 54 100 100 LYS LYS A . n A 1 55 ASP 55 101 101 ASP ASP A . n A 1 56 ASP 56 102 102 ASP ASP A . n A 1 57 ALA 57 103 103 ALA ALA A . n A 1 58 GLU 58 104 104 GLU GLU A . n A 1 59 ALA 59 105 105 ALA ALA A . n A 1 60 LEU 60 106 106 LEU LEU A . n A 1 61 LYS 61 107 107 LYS LYS A . n A 1 62 LYS 62 108 108 LYS LYS A . n A 1 63 ALA 63 109 109 ALA ALA A . n A 1 64 LEU 64 110 110 LEU LEU A . n A 1 65 GLU 65 111 111 GLU GLU A . n A 1 66 GLU 66 112 112 GLU GLU A . n A 1 67 ALA 67 113 113 ALA ALA A . n A 1 68 GLY 68 114 114 GLY GLY A . n A 1 69 ALA 69 115 115 ALA ALA A . n A 1 70 GLU 70 116 116 GLU GLU A . n A 1 71 VAL 71 117 117 VAL VAL A . n A 1 72 GLU 72 118 118 GLU GLU A . n A 1 73 VAL 73 119 119 VAL VAL A . n A 1 74 LYS 74 120 120 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 1 1 SO4 SO4 A . C 3 HOH 1 121 1 HOH HOH A . C 3 HOH 2 122 2 HOH HOH A . C 3 HOH 3 123 3 HOH HOH A . C 3 HOH 4 124 4 HOH HOH A . C 3 HOH 5 125 5 HOH HOH A . C 3 HOH 6 126 6 HOH HOH A . C 3 HOH 7 127 7 HOH HOH A . C 3 HOH 8 128 8 HOH HOH A . C 3 HOH 9 129 9 HOH HOH A . C 3 HOH 10 130 10 HOH HOH A . C 3 HOH 11 131 11 HOH HOH A . C 3 HOH 12 132 12 HOH HOH A . C 3 HOH 13 133 13 HOH HOH A . C 3 HOH 14 134 14 HOH HOH A . C 3 HOH 15 135 15 HOH HOH A . C 3 HOH 16 136 16 HOH HOH A . C 3 HOH 17 137 17 HOH HOH A . C 3 HOH 18 138 18 HOH HOH A . C 3 HOH 19 139 19 HOH HOH A . C 3 HOH 20 140 20 HOH HOH A . C 3 HOH 21 141 21 HOH HOH A . C 3 HOH 22 142 22 HOH HOH A . C 3 HOH 23 143 23 HOH HOH A . C 3 HOH 24 144 24 HOH HOH A . C 3 HOH 25 145 25 HOH HOH A . C 3 HOH 26 146 26 HOH HOH A . C 3 HOH 27 147 27 HOH HOH A . C 3 HOH 28 148 28 HOH HOH A . C 3 HOH 29 149 29 HOH HOH A . C 3 HOH 30 150 30 HOH HOH A . C 3 HOH 31 151 31 HOH HOH A . C 3 HOH 32 152 32 HOH HOH A . C 3 HOH 33 153 33 HOH HOH A . C 3 HOH 34 154 34 HOH HOH A . C 3 HOH 35 155 35 HOH HOH A . C 3 HOH 36 156 36 HOH HOH A . C 3 HOH 37 157 37 HOH HOH A . C 3 HOH 38 158 38 HOH HOH A . C 3 HOH 39 159 39 HOH HOH A . C 3 HOH 40 160 40 HOH HOH A . C 3 HOH 41 161 41 HOH HOH A . C 3 HOH 42 162 42 HOH HOH A . C 3 HOH 43 163 43 HOH HOH A . C 3 HOH 44 164 44 HOH HOH A . C 3 HOH 45 165 45 HOH HOH A . C 3 HOH 46 166 46 HOH HOH A . C 3 HOH 47 167 47 HOH HOH A . C 3 HOH 48 168 48 HOH HOH A . C 3 HOH 49 169 49 HOH HOH A . C 3 HOH 50 170 50 HOH HOH A . C 3 HOH 51 171 51 HOH HOH A . C 3 HOH 52 172 52 HOH HOH A . C 3 HOH 53 173 53 HOH HOH A . C 3 HOH 54 174 54 HOH HOH A . C 3 HOH 55 175 55 HOH HOH A . C 3 HOH 56 176 56 HOH HOH A . C 3 HOH 57 177 57 HOH HOH A . C 3 HOH 58 178 58 HOH HOH A . C 3 HOH 59 179 59 HOH HOH A . C 3 HOH 60 180 60 HOH HOH A . C 3 HOH 61 181 61 HOH HOH A . C 3 HOH 62 182 62 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 160 ? C HOH . 2 1 A HOH 179 ? C HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1987-01-15 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' struct_conf 3 4 'Structure model' struct_conf_type # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_database_status.process_site' # _software.name CORELS _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O3 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SO4 _pdbx_validate_close_contact.auth_seq_id_1 1 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 131 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.94 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O2 A SO4 1 ? ? 1_555 O A HOH 165 ? ? 5_544 1.91 2 1 O1 A SO4 1 ? ? 1_555 O A HOH 144 ? ? 3_544 2.13 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 OE1 A GLU 53 ? ? CD A GLU 53 ? ? OE2 A GLU 53 ? ? 115.50 123.30 -7.80 1.20 N 2 1 CB A ASP 55 ? ? CG A ASP 55 ? ? OD1 A ASP 55 ? ? 127.46 118.30 9.16 0.90 N 3 1 NE A ARG 73 ? ? CZ A ARG 73 ? ? NH1 A ARG 73 ? ? 116.67 120.30 -3.63 0.50 N 4 1 NE A ARG 73 ? ? CZ A ARG 73 ? ? NH2 A ARG 73 ? ? 125.87 120.30 5.57 0.50 N 5 1 CA A THR 76 ? ? CB A THR 76 ? ? CG2 A THR 76 ? ? 125.12 112.40 12.72 1.40 N 6 1 CA A THR 76 ? ? C A THR 76 ? ? N A GLY 77 ? ? 128.76 116.20 12.56 2.00 Y 7 1 OE1 A GLU 82 ? ? CD A GLU 82 ? ? OE2 A GLU 82 ? ? 116.00 123.30 -7.30 1.20 N 8 1 CB A ASP 85 ? ? CG A ASP 85 ? ? OD2 A ASP 85 ? ? 124.55 118.30 6.25 0.90 N 9 1 CA A LEU 86 ? ? CB A LEU 86 ? ? CG A LEU 86 ? ? 129.11 115.30 13.81 2.30 N 10 1 O A GLU 88 ? ? C A GLU 88 ? ? N A SER 89 ? ? 112.55 122.70 -10.15 1.60 Y 11 1 CA A LYS 95 ? ? CB A LYS 95 ? ? CG A LYS 95 ? ? 99.90 113.40 -13.50 2.20 N 12 1 CB A ASP 101 ? ? CG A ASP 101 ? ? OD2 A ASP 101 ? ? 125.61 118.30 7.31 0.90 N 13 1 O A ASP 102 ? ? C A ASP 102 ? ? N A ALA 103 ? ? 133.16 122.70 10.46 1.60 Y 14 1 OE1 A GLU 111 ? ? CD A GLU 111 ? ? OE2 A GLU 111 ? ? 133.93 123.30 10.63 1.20 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 47 ? A ALA 1 2 1 Y 1 A ALA 48 ? A ALA 2 3 1 Y 1 A GLU 49 ? A GLU 3 4 1 Y 1 A GLU 50 ? A GLU 4 5 1 Y 1 A LYS 51 ? A LYS 5 6 1 Y 1 A THR 52 ? A THR 6 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #