data_1CY5 # _entry.id 1CY5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.289 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1CY5 RCSB RCSB009622 WWPDB D_1000009622 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1CY5 _pdbx_database_status.recvd_initial_deposition_date 1999-08-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vaughn, D.E.' 1 'Joshua-Tor, L.' 2 # _citation.id primary _citation.title 'Crystal structure of Apaf-1 caspase recruitment domain: an alpha-helical Greek key fold for apoptotic signaling.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 293 _citation.page_first 439 _citation.page_last 447 _citation.year 1999 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10543941 _citation.pdbx_database_id_DOI 10.1006/jmbi.1999.3177 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Vaughn, D.E.' 1 primary 'Rodriguez, J.' 2 primary 'Lazebnik, Y.' 3 primary 'Joshua-Tor, L.' 4 # _cell.entry_id 1CY5 _cell.length_a 36.350 _cell.length_b 46.910 _cell.length_c 54.350 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CY5 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTEIN (APOPTOTIC PROTEASE ACTIVATING FACTOR 1)' 11099.710 1 ? ? 'CASPASE RECRUITMENT DOMAIN' ? 2 non-polymer syn 'ZINC ION' 65.409 5 ? ? ? ? 3 non-polymer syn BETA-MERCAPTOETHANOL 78.133 1 ? ? ? ? 4 water nat water 18.015 106 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'APAF-1 CARD' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MDAKARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRAAMLIKMILKKDNDSYVSFYNALLHEGY KDLAALLHDGIPVVSSS ; _entity_poly.pdbx_seq_one_letter_code_can ;MDAKARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRAAMLIKMILKKDNDSYVSFYNALLHEGY KDLAALLHDGIPVVSSS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 ALA n 1 4 LYS n 1 5 ALA n 1 6 ARG n 1 7 ASN n 1 8 CYS n 1 9 LEU n 1 10 LEU n 1 11 GLN n 1 12 HIS n 1 13 ARG n 1 14 GLU n 1 15 ALA n 1 16 LEU n 1 17 GLU n 1 18 LYS n 1 19 ASP n 1 20 ILE n 1 21 LYS n 1 22 THR n 1 23 SER n 1 24 TYR n 1 25 ILE n 1 26 MET n 1 27 ASP n 1 28 HIS n 1 29 MET n 1 30 ILE n 1 31 SER n 1 32 ASP n 1 33 GLY n 1 34 PHE n 1 35 LEU n 1 36 THR n 1 37 ILE n 1 38 SER n 1 39 GLU n 1 40 GLU n 1 41 GLU n 1 42 LYS n 1 43 VAL n 1 44 ARG n 1 45 ASN n 1 46 GLU n 1 47 PRO n 1 48 THR n 1 49 GLN n 1 50 GLN n 1 51 GLN n 1 52 ARG n 1 53 ALA n 1 54 ALA n 1 55 MET n 1 56 LEU n 1 57 ILE n 1 58 LYS n 1 59 MET n 1 60 ILE n 1 61 LEU n 1 62 LYS n 1 63 LYS n 1 64 ASP n 1 65 ASN n 1 66 ASP n 1 67 SER n 1 68 TYR n 1 69 VAL n 1 70 SER n 1 71 PHE n 1 72 TYR n 1 73 ASN n 1 74 ALA n 1 75 LEU n 1 76 LEU n 1 77 HIS n 1 78 GLU n 1 79 GLY n 1 80 TYR n 1 81 LYS n 1 82 ASP n 1 83 LEU n 1 84 ALA n 1 85 ALA n 1 86 LEU n 1 87 LEU n 1 88 HIS n 1 89 ASP n 1 90 GLY n 1 91 ILE n 1 92 PRO n 1 93 VAL n 1 94 VAL n 1 95 SER n 1 96 SER n 1 97 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code APAF_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession O14727 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1CY5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 97 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O14727 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 97 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 97 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1CY5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_percent_sol 30.0 _exptl_crystal.description ;RESIDUES 93-97 ARE DISORDERED AND NOT MODELED. SEE JOURNAL REFERENCE FOR PHASING DETAILS ; # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 290.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details ;HANGING DROP VAPOR DIFFUSION WITH EQUAL VOLUMES OF PROTEIN AND RESERVOIR SOLUTIONS. PROTEIN SOLUTION: 5-20 MG/ML PROTEIN IN 0.02 MOLAR TRIS (PH 8.0-8.5) , 0.1-0.2 MOLAR SODIUM CHLORIDE. 0.005 MOLAR 2-MERCAPTOETHANOL RESERVOIR SOLUTION: 8-20% (W/V) PEG 8000, 0.2 MOLAR TRIS (PH 7.5-8.0), 0.05-0.2 MOLAR ZINC ACETATE., VAPOR DIFFUSION, HANGING DROP, temperature 17K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ADSC _diffrn_detector.pdbx_collection_date 1999-02-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.10 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X26C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X26C _diffrn_source.pdbx_wavelength 1.10 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1CY5 _reflns.observed_criterion_sigma_I -9.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 1.300 _reflns.number_obs 24113 _reflns.number_all ? _reflns.percent_possible_obs 98.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.026 _reflns.pdbx_netI_over_sigmaI 35.0000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.000 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.30 _reflns_shell.d_res_low 1.35 _reflns_shell.percent_possible_all 96.0 _reflns_shell.Rmerge_I_obs 0.2300000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.300 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1CY5 _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 39179 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 1.30 _refine.ls_percent_reflns_obs 87.0 _refine.ls_R_factor_obs 0.1690000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.1990000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.00 _refine.ls_number_reflns_R_free 3918 _refine.ls_number_parameters 7764 _refine.ls_number_restraints 13719 _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method FREE-R _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ;MAD PROGRAM PACKAGE USED (IF ANY) : SHARP STARTING MODEL FOR MOLECULAR REPLACEMENT: NONE ; _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1CY5 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen 741.00 _refine_analyze.occupancy_sum_non_hydrogen 853.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 745 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 106 _refine_hist.number_atoms_total 861 _refine_hist.d_res_high 1.30 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.019 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist ? ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.032 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.021 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.030 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr ? ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.004 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.068 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.095 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1CY5 _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.1690000 _pdbx_refine.free_R_factor_no_cutoff 0.1990000 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 10.00 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 3918 _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff 0.1590000 _pdbx_refine.free_R_factor_4sig_cutoff 0.1880000 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 10.00 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 3111 _pdbx_refine.number_reflns_obs_4sig_cutoff 31310 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 1CY5 _struct.title 'CRYSTAL STRUCTURE OF THE APAF-1 CARD' _struct.pdbx_descriptor 'PROTEIN (APOPTOTIC PROTEASE ACTIVATING FACTOR 1)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1CY5 _struct_keywords.pdbx_keywords APOPTOSIS _struct_keywords.text 'CASPASE RECRUITMENT DOMAIN, DEATH FOLD, SIX ALPHA-HELIX BUNDLE, GREEK KEY TOPOLOGY, APOPTOSIS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1 ASP A 2 ? ILE A 20 ? ASP A 2 ILE A 20 1 'KINKED 77 DEGREES AT HIS-12' 19 HELX_P HELX_P2 H2 THR A 22 ? GLY A 33 ? THR A 22 GLY A 33 1 ? 12 HELX_P HELX_P3 H3 THR A 36 ? GLU A 46 ? THR A 36 GLU A 46 1 ? 11 HELX_P HELX_P4 H4 THR A 48 ? LYS A 63 ? THR A 48 LYS A 63 1 ? 16 HELX_P HELX_P5 H5 ASP A 64 ? GLU A 78 ? ASP A 64 GLU A 78 1 ? 15 HELX_P HELX_P6 H6A TYR A 80 ? HIS A 88 ? TYR A 80 HIS A 88 1 ? 9 HELX_P HELX_P7 H6B LEU A 87 ? ILE A 91 ? LEU A 87 ILE A 91 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? B ZN . ZN A ? ? 1_555 A GLU 17 OE1 ? ? A ZN 101 A GLU 17 1_555 ? ? ? ? ? ? ? 1.554 ? metalc2 metalc ? ? E ZN . ZN ? ? ? 1_555 A GLU 41 OE2 ? ? A ZN 104 A GLU 41 1_555 ? ? ? ? ? ? ? 1.576 ? covale1 covale ? ? G BME . S2 ? ? ? 1_555 A CYS 8 SG ? ? A BME 99 A CYS 8 1_555 ? ? ? ? ? ? ? 1.999 ? metalc3 metalc ? ? B ZN . ZN A ? ? 1_555 H HOH . O ? ? A ZN 101 A HOH 290 1_555 ? ? ? ? ? ? ? 1.934 ? metalc4 metalc ? ? B ZN . ZN B ? ? 1_555 A GLU 17 OE1 ? ? A ZN 101 A GLU 17 1_555 ? ? ? ? ? ? ? 2.363 ? metalc5 metalc ? ? B ZN . ZN B ? ? 1_555 H HOH . O ? ? A ZN 101 A HOH 201 1_555 ? ? ? ? ? ? ? 1.984 ? metalc6 metalc ? ? B ZN . ZN A ? ? 1_555 A GLU 17 OE2 ? ? A ZN 101 A GLU 17 1_555 ? ? ? ? ? ? ? 2.711 ? metalc7 metalc ? ? C ZN . ZN ? ? ? 1_555 A GLU 40 OE2 ? ? A ZN 102 A GLU 40 1_555 ? ? ? ? ? ? ? 1.921 ? metalc8 metalc ? ? C ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 102 A HOH 282 1_555 ? ? ? ? ? ? ? 1.904 ? metalc9 metalc ? ? C ZN . ZN ? ? ? 1_555 A ASP 27 OD1 ? ? A ZN 102 A ASP 27 1_555 ? ? ? ? ? ? ? 1.959 ? metalc10 metalc ? ? C ZN . ZN ? ? ? 1_555 A GLU 40 OE1 ? ? A ZN 102 A GLU 40 1_555 ? ? ? ? ? ? ? 2.601 ? metalc11 metalc ? ? D ZN . ZN ? ? ? 1_555 A HIS 28 NE2 ? ? A ZN 103 A HIS 28 1_555 ? ? ? ? ? ? ? 2.220 ? metalc12 metalc ? ? D ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 103 A HOH 299 1_555 ? ? ? ? ? ? ? 2.751 ? metalc13 metalc ? ? D ZN . ZN ? ? ? 1_555 A ASP 32 OD1 ? ? A ZN 103 A ASP 32 1_555 ? ? ? ? ? ? ? 2.405 ? metalc14 metalc ? ? E ZN . ZN ? ? ? 1_555 A GLU 41 OE1 ? ? A ZN 104 A GLU 41 1_555 ? ? ? ? ? ? ? 2.639 ? metalc15 metalc ? ? F ZN . ZN ? ? ? 1_555 A GLU 78 OE2 ? ? A ZN 105 A GLU 78 1_555 ? ? ? ? ? ? ? 1.939 ? metalc16 metalc ? ? F ZN . ZN ? ? ? 1_555 A HIS 28 ND1 ? ? A ZN 105 A HIS 28 1_555 ? ? ? ? ? ? ? 1.828 ? metalc17 metalc ? ? F ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 105 A HOH 305 1_555 ? ? ? ? ? ? ? 2.640 ? metalc18 metalc ? ? B ZN . ZN A ? ? 1_555 A ASP 66 OD1 ? ? A ZN 101 A ASP 66 3_555 ? ? ? ? ? ? ? 2.501 ? metalc19 metalc ? ? B ZN . ZN A ? ? 1_555 A ASP 64 OD2 ? ? A ZN 101 A ASP 64 3_555 ? ? ? ? ? ? ? 1.843 ? metalc20 metalc ? ? B ZN . ZN A ? ? 1_555 A ASP 66 OD2 ? ? A ZN 101 A ASP 66 3_555 ? ? ? ? ? ? ? 2.171 ? metalc21 metalc ? ? B ZN . ZN B ? ? 1_555 A ASP 64 OD2 ? ? A ZN 101 A ASP 64 3_555 ? ? ? ? ? ? ? 2.265 ? metalc22 metalc ? ? B ZN . ZN B ? ? 1_555 A ASP 66 OD2 ? ? A ZN 101 A ASP 66 3_555 ? ? ? ? ? ? ? 2.061 ? metalc23 metalc ? ? C ZN . ZN ? ? ? 1_555 A HIS 88 NE2 ? ? A ZN 102 A HIS 88 2_554 ? ? ? ? ? ? ? 2.022 ? metalc24 metalc ? ? E ZN . ZN ? ? ? 1_555 A HIS 77 NE2 ? ? A ZN 104 A HIS 77 2_554 ? ? ? ? ? ? ? 1.989 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE ZN A 101' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ZN A 102' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE ZN A 103' AC4 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE ZN A 104' AC5 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 105' AC6 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE BME A 99' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 17 ? GLU A 17 . ? 1_555 ? 2 AC1 6 GLN A 50 ? GLN A 50 . ? 1_555 ? 3 AC1 6 ASP A 64 ? ASP A 64 . ? 3_555 ? 4 AC1 6 ASP A 66 ? ASP A 66 . ? 3_555 ? 5 AC1 6 HOH H . ? HOH A 201 . ? 1_555 ? 6 AC1 6 HOH H . ? HOH A 290 . ? 1_555 ? 7 AC2 5 ASP A 27 ? ASP A 27 . ? 1_555 ? 8 AC2 5 ILE A 30 ? ILE A 30 . ? 1_555 ? 9 AC2 5 GLU A 40 ? GLU A 40 . ? 1_555 ? 10 AC2 5 HIS A 88 ? HIS A 88 . ? 2_554 ? 11 AC2 5 HOH H . ? HOH A 282 . ? 1_555 ? 12 AC3 3 HIS A 28 ? HIS A 28 . ? 1_555 ? 13 AC3 3 ASP A 32 ? ASP A 32 . ? 1_555 ? 14 AC3 3 HOH H . ? HOH A 299 . ? 1_555 ? 15 AC4 2 GLU A 41 ? GLU A 41 . ? 1_555 ? 16 AC4 2 HIS A 77 ? HIS A 77 . ? 2_554 ? 17 AC5 4 HIS A 28 ? HIS A 28 . ? 1_555 ? 18 AC5 4 GLU A 78 ? GLU A 78 . ? 1_555 ? 19 AC5 4 HOH H . ? HOH A 305 . ? 1_555 ? 20 AC5 4 HOH H . ? HOH A 306 . ? 1_555 ? 21 AC6 6 CYS A 8 ? CYS A 8 . ? 1_555 ? 22 AC6 6 HIS A 12 ? HIS A 12 . ? 1_555 ? 23 AC6 6 ASP A 82 ? ASP A 82 . ? 4_456 ? 24 AC6 6 LEU A 86 ? LEU A 86 . ? 1_555 ? 25 AC6 6 GLY A 90 ? GLY A 90 . ? 1_555 ? 26 AC6 6 HOH H . ? HOH A 207 . ? 1_555 ? # _database_PDB_matrix.entry_id 1CY5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1CY5 _atom_sites.fract_transf_matrix[1][1] 0.027510 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021317 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018399 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 CYS 8 8 8 CYS CYS A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 HIS 12 12 12 HIS HIS A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 MET 26 26 26 MET MET A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 HIS 28 28 28 HIS HIS A . n A 1 29 MET 29 29 29 MET MET A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 GLN 50 50 50 GLN GLN A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 MET 55 55 55 MET MET A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 MET 59 59 59 MET MET A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 HIS 77 77 77 HIS HIS A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 VAL 94 94 ? ? ? A . n A 1 95 SER 95 95 ? ? ? A . n A 1 96 SER 96 96 ? ? ? A . n A 1 97 SER 97 97 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 101 101 ZN ZN A . C 2 ZN 1 102 102 ZN ZN A . D 2 ZN 1 103 103 ZN ZN A . E 2 ZN 1 104 104 ZN ZN A . F 2 ZN 1 105 105 ZN ZN A . G 3 BME 1 99 99 BME BME A . H 4 HOH 1 201 201 HOH HOH A . H 4 HOH 2 202 202 HOH HOH A . H 4 HOH 3 203 203 HOH HOH A . H 4 HOH 4 204 204 HOH HOH A . H 4 HOH 5 205 205 HOH HOH A . H 4 HOH 6 206 206 HOH HOH A . H 4 HOH 7 207 207 HOH HOH A . H 4 HOH 8 208 208 HOH HOH A . H 4 HOH 9 209 209 HOH HOH A . H 4 HOH 10 210 210 HOH HOH A . H 4 HOH 11 211 211 HOH HOH A . H 4 HOH 12 212 212 HOH HOH A . H 4 HOH 13 213 213 HOH HOH A . H 4 HOH 14 214 214 HOH HOH A . H 4 HOH 15 215 215 HOH HOH A . H 4 HOH 16 216 216 HOH HOH A . H 4 HOH 17 217 217 HOH HOH A . H 4 HOH 18 218 218 HOH HOH A . H 4 HOH 19 219 219 HOH HOH A . H 4 HOH 20 220 220 HOH HOH A . H 4 HOH 21 221 221 HOH HOH A . H 4 HOH 22 222 222 HOH HOH A . H 4 HOH 23 223 223 HOH HOH A . H 4 HOH 24 224 224 HOH HOH A . H 4 HOH 25 225 225 HOH HOH A . H 4 HOH 26 226 226 HOH HOH A . H 4 HOH 27 227 227 HOH HOH A . H 4 HOH 28 228 228 HOH HOH A . H 4 HOH 29 229 229 HOH HOH A . H 4 HOH 30 230 230 HOH HOH A . H 4 HOH 31 231 231 HOH HOH A . H 4 HOH 32 232 232 HOH HOH A . H 4 HOH 33 233 233 HOH HOH A . H 4 HOH 34 234 234 HOH HOH A . H 4 HOH 35 235 235 HOH HOH A . H 4 HOH 36 236 236 HOH HOH A . H 4 HOH 37 237 237 HOH HOH A . H 4 HOH 38 238 238 HOH HOH A . H 4 HOH 39 239 239 HOH HOH A . H 4 HOH 40 240 240 HOH HOH A . H 4 HOH 41 241 241 HOH HOH A . H 4 HOH 42 242 242 HOH HOH A . H 4 HOH 43 243 243 HOH HOH A . H 4 HOH 44 244 244 HOH HOH A . H 4 HOH 45 245 245 HOH HOH A . H 4 HOH 46 246 246 HOH HOH A . H 4 HOH 47 247 247 HOH HOH A . H 4 HOH 48 248 248 HOH HOH A . H 4 HOH 49 249 249 HOH HOH A . H 4 HOH 50 250 250 HOH HOH A . H 4 HOH 51 251 251 HOH HOH A . H 4 HOH 52 252 252 HOH HOH A . H 4 HOH 53 253 253 HOH HOH A . H 4 HOH 54 254 254 HOH HOH A . H 4 HOH 55 255 255 HOH HOH A . H 4 HOH 56 256 256 HOH HOH A . H 4 HOH 57 257 257 HOH HOH A . H 4 HOH 58 258 258 HOH HOH A . H 4 HOH 59 259 259 HOH HOH A . H 4 HOH 60 260 260 HOH HOH A . H 4 HOH 61 261 261 HOH HOH A . H 4 HOH 62 262 262 HOH HOH A . H 4 HOH 63 263 263 HOH HOH A . H 4 HOH 64 264 264 HOH HOH A . H 4 HOH 65 265 265 HOH HOH A . H 4 HOH 66 266 266 HOH HOH A . H 4 HOH 67 267 267 HOH HOH A . H 4 HOH 68 268 268 HOH HOH A . H 4 HOH 69 269 269 HOH HOH A . H 4 HOH 70 270 270 HOH HOH A . H 4 HOH 71 271 271 HOH HOH A . H 4 HOH 72 272 272 HOH HOH A . H 4 HOH 73 273 273 HOH HOH A . H 4 HOH 74 274 274 HOH HOH A . H 4 HOH 75 275 275 HOH HOH A . H 4 HOH 76 276 276 HOH HOH A . H 4 HOH 77 277 277 HOH HOH A . H 4 HOH 78 278 278 HOH HOH A . H 4 HOH 79 279 279 HOH HOH A . H 4 HOH 80 280 280 HOH HOH A . H 4 HOH 81 281 281 HOH HOH A . H 4 HOH 82 282 282 HOH HOH A . H 4 HOH 83 283 283 HOH HOH A . H 4 HOH 84 284 284 HOH HOH A . H 4 HOH 85 285 285 HOH HOH A . H 4 HOH 86 286 286 HOH HOH A . H 4 HOH 87 287 287 HOH HOH A . H 4 HOH 88 288 288 HOH HOH A . H 4 HOH 89 289 289 HOH HOH A . H 4 HOH 90 290 290 HOH HOH A . H 4 HOH 91 291 291 HOH HOH A . H 4 HOH 92 292 292 HOH HOH A . H 4 HOH 93 293 293 HOH HOH A . H 4 HOH 94 294 294 HOH HOH A . H 4 HOH 95 295 295 HOH HOH A . H 4 HOH 96 296 296 HOH HOH A . H 4 HOH 97 297 297 HOH HOH A . H 4 HOH 98 298 298 HOH HOH A . H 4 HOH 99 299 299 HOH HOH A . H 4 HOH 100 300 300 HOH HOH A . H 4 HOH 101 301 301 HOH HOH A . H 4 HOH 102 302 302 HOH HOH A . H 4 HOH 103 303 303 HOH HOH A . H 4 HOH 104 304 304 HOH HOH A . H 4 HOH 105 305 305 HOH HOH A . H 4 HOH 106 306 306 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 17 ? A GLU 17 ? 1_555 ZN A B ZN . ? A ZN 101 ? 1_555 O ? H HOH . ? A HOH 290 ? 1_555 107.3 ? 2 OE1 ? A GLU 17 ? A GLU 17 ? 1_555 ZN A B ZN . ? A ZN 101 ? 1_555 OE2 ? A GLU 17 ? A GLU 17 ? 1_555 53.9 ? 3 O ? H HOH . ? A HOH 290 ? 1_555 ZN A B ZN . ? A ZN 101 ? 1_555 OE2 ? A GLU 17 ? A GLU 17 ? 1_555 64.4 ? 4 OE1 ? A GLU 17 ? A GLU 17 ? 1_555 ZN A B ZN . ? A ZN 101 ? 1_555 OD1 ? A ASP 66 ? A ASP 66 ? 3_555 138.1 ? 5 O ? H HOH . ? A HOH 290 ? 1_555 ZN A B ZN . ? A ZN 101 ? 1_555 OD1 ? A ASP 66 ? A ASP 66 ? 3_555 61.8 ? 6 OE2 ? A GLU 17 ? A GLU 17 ? 1_555 ZN A B ZN . ? A ZN 101 ? 1_555 OD1 ? A ASP 66 ? A ASP 66 ? 3_555 125.3 ? 7 OE1 ? A GLU 17 ? A GLU 17 ? 1_555 ZN A B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 64 ? A ASP 64 ? 3_555 107.0 ? 8 O ? H HOH . ? A HOH 290 ? 1_555 ZN A B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 64 ? A ASP 64 ? 3_555 119.9 ? 9 OE2 ? A GLU 17 ? A GLU 17 ? 1_555 ZN A B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 64 ? A ASP 64 ? 3_555 158.1 ? 10 OD1 ? A ASP 66 ? A ASP 66 ? 3_555 ZN A B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 64 ? A ASP 64 ? 3_555 59.5 ? 11 OE1 ? A GLU 17 ? A GLU 17 ? 1_555 ZN A B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 66 ? A ASP 66 ? 3_555 158.4 ? 12 O ? H HOH . ? A HOH 290 ? 1_555 ZN A B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 66 ? A ASP 66 ? 3_555 60.8 ? 13 OE2 ? A GLU 17 ? A GLU 17 ? 1_555 ZN A B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 66 ? A ASP 66 ? 3_555 105.2 ? 14 OD1 ? A ASP 66 ? A ASP 66 ? 3_555 ZN A B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 66 ? A ASP 66 ? 3_555 55.3 ? 15 OD2 ? A ASP 64 ? A ASP 64 ? 3_555 ZN A B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 66 ? A ASP 66 ? 3_555 94.6 ? 16 OE2 ? A GLU 41 ? A GLU 41 ? 1_555 ZN ? E ZN . ? A ZN 104 ? 1_555 OE1 ? A GLU 41 ? A GLU 41 ? 1_555 56.0 ? 17 OE2 ? A GLU 41 ? A GLU 41 ? 1_555 ZN ? E ZN . ? A ZN 104 ? 1_555 NE2 ? A HIS 77 ? A HIS 77 ? 2_554 128.0 ? 18 OE1 ? A GLU 41 ? A GLU 41 ? 1_555 ZN ? E ZN . ? A ZN 104 ? 1_555 NE2 ? A HIS 77 ? A HIS 77 ? 2_554 92.0 ? 19 OE1 ? A GLU 17 ? A GLU 17 ? 1_555 ZN B B ZN . ? A ZN 101 ? 1_555 O ? H HOH . ? A HOH 201 ? 1_555 121.3 ? 20 OE1 ? A GLU 17 ? A GLU 17 ? 1_555 ZN B B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 64 ? A ASP 64 ? 3_555 72.5 ? 21 O ? H HOH . ? A HOH 201 ? 1_555 ZN B B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 64 ? A ASP 64 ? 3_555 140.2 ? 22 OE1 ? A GLU 17 ? A GLU 17 ? 1_555 ZN B B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 66 ? A ASP 66 ? 3_555 111.5 ? 23 O ? H HOH . ? A HOH 201 ? 1_555 ZN B B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 66 ? A ASP 66 ? 3_555 116.3 ? 24 OD2 ? A ASP 64 ? A ASP 64 ? 3_555 ZN B B ZN . ? A ZN 101 ? 1_555 OD2 ? A ASP 66 ? A ASP 66 ? 3_555 86.1 ? 25 OE2 ? A GLU 40 ? A GLU 40 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 O ? H HOH . ? A HOH 282 ? 1_555 103.3 ? 26 OE2 ? A GLU 40 ? A GLU 40 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 OD1 ? A ASP 27 ? A ASP 27 ? 1_555 93.6 ? 27 O ? H HOH . ? A HOH 282 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 OD1 ? A ASP 27 ? A ASP 27 ? 1_555 119.0 ? 28 OE2 ? A GLU 40 ? A GLU 40 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 OE1 ? A GLU 40 ? A GLU 40 ? 1_555 55.6 ? 29 O ? H HOH . ? A HOH 282 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 OE1 ? A GLU 40 ? A GLU 40 ? 1_555 95.2 ? 30 OD1 ? A ASP 27 ? A ASP 27 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 OE1 ? A GLU 40 ? A GLU 40 ? 1_555 139.6 ? 31 OE2 ? A GLU 40 ? A GLU 40 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 NE2 ? A HIS 88 ? A HIS 88 ? 2_554 130.9 ? 32 O ? H HOH . ? A HOH 282 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 NE2 ? A HIS 88 ? A HIS 88 ? 2_554 107.2 ? 33 OD1 ? A ASP 27 ? A ASP 27 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 NE2 ? A HIS 88 ? A HIS 88 ? 2_554 103.6 ? 34 OE1 ? A GLU 40 ? A GLU 40 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 NE2 ? A HIS 88 ? A HIS 88 ? 2_554 83.9 ? 35 NE2 ? A HIS 28 ? A HIS 28 ? 1_555 ZN ? D ZN . ? A ZN 103 ? 1_555 O ? H HOH . ? A HOH 299 ? 1_555 154.7 ? 36 NE2 ? A HIS 28 ? A HIS 28 ? 1_555 ZN ? D ZN . ? A ZN 103 ? 1_555 OD1 ? A ASP 32 ? A ASP 32 ? 1_555 98.1 ? 37 O ? H HOH . ? A HOH 299 ? 1_555 ZN ? D ZN . ? A ZN 103 ? 1_555 OD1 ? A ASP 32 ? A ASP 32 ? 1_555 107.2 ? 38 OE2 ? A GLU 78 ? A GLU 78 ? 1_555 ZN ? F ZN . ? A ZN 105 ? 1_555 ND1 ? A HIS 28 ? A HIS 28 ? 1_555 144.0 ? 39 OE2 ? A GLU 78 ? A GLU 78 ? 1_555 ZN ? F ZN . ? A ZN 105 ? 1_555 O ? H HOH . ? A HOH 305 ? 1_555 73.7 ? 40 ND1 ? A HIS 28 ? A HIS 28 ? 1_555 ZN ? F ZN . ? A ZN 105 ? 1_555 O ? H HOH . ? A HOH 305 ? 1_555 118.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-09-13 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Experimental preparation' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category exptl_crystal_grow # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_exptl_crystal_grow.pdbx_details' 2 4 'Structure model' '_exptl_crystal_grow.temp' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHARP phasing . ? 1 SHELXL-97 refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 286 ? ? O A HOH 289 ? ? 1.31 2 1 O A HOH 221 ? ? O A HOH 282 ? ? 1.98 3 1 CB A ASP 66 ? ? O A HOH 273 ? ? 2.10 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OD2 A ASP 66 ? ? 1_555 O A HOH 290 ? ? 3_545 2.09 2 1 O A HOH 229 ? ? 1_555 O A HOH 271 ? ? 3_545 2.18 3 1 CG A ASP 66 ? ? 1_555 O A HOH 290 ? ? 3_545 2.18 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A VAL 93 ? CA ? A VAL 93 CA 2 1 Y 1 A VAL 93 ? C ? A VAL 93 C 3 1 Y 1 A VAL 93 ? O ? A VAL 93 O 4 1 Y 1 A VAL 93 ? CB ? A VAL 93 CB 5 1 Y 1 A VAL 93 ? CG1 ? A VAL 93 CG1 6 1 Y 1 A VAL 93 ? CG2 ? A VAL 93 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 94 ? A VAL 94 2 1 Y 1 A SER 95 ? A SER 95 3 1 Y 1 A SER 96 ? A SER 96 4 1 Y 1 A SER 97 ? A SER 97 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 BETA-MERCAPTOETHANOL BME 4 water HOH #